View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0808_low_22 (Length: 362)

Name: NF0808_low_22
Description: NF0808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0808_low_22
NF0808_low_22
[»] chr6 (41 HSPs)
chr6 (109-346)||(8464820-8465058)
chr6 (206-346)||(13196092-13196233)
chr6 (206-346)||(21722658-21722799)
chr6 (206-346)||(11992271-11992412)
chr6 (205-346)||(19168214-19168356)
chr6 (206-346)||(17235362-17235503)
chr6 (206-349)||(20989040-20989184)
chr6 (206-346)||(13869655-13869793)
chr6 (206-350)||(12038958-12039105)
chr6 (206-350)||(20653833-20653979)
chr6 (209-332)||(20465165-20465290)
chr6 (206-346)||(25970445-25970586)
chr6 (206-346)||(25974885-25975026)
chr6 (205-346)||(33666559-33666699)
chr6 (205-355)||(19077902-19078049)
chr6 (206-324)||(21705780-21705899)
chr6 (206-346)||(23879653-23879794)
chr6 (206-346)||(12385109-12385249)
chr6 (205-346)||(19893917-19894059)
chr6 (206-346)||(17855963-17856104)
chr6 (205-314)||(19100675-19100785)
chr6 (206-346)||(9280960-9281101)
chr6 (205-339)||(17863723-17863858)
chr6 (206-346)||(29252929-29253072)
chr6 (285-350)||(25806172-25806236)
chr6 (286-346)||(23882029-23882089)
chr6 (303-349)||(11961234-11961280)
chr6 (206-346)||(15930099-15930239)
chr6 (206-291)||(17525586-17525672)
chr6 (209-254)||(23880944-23880990)
chr6 (289-346)||(19598449-19598506)
chr6 (205-249)||(26964804-26964849)
chr6 (206-253)||(21316890-21316938)
chr6 (207-254)||(24542696-24542744)
chr6 (271-346)||(19658687-19658761)
chr6 (205-254)||(34991154-34991205)
chr6 (209-254)||(3566104-3566150)
chr6 (206-254)||(17868220-17868269)
chr6 (206-254)||(17878003-17878052)
chr6 (211-254)||(19598530-19598574)
chr6 (303-343)||(24542425-24542465)
[»] chr7 (27 HSPs)
chr7 (205-346)||(12326580-12326722)
chr7 (206-339)||(15507005-15507139)
chr7 (206-346)||(4459507-4459649)
chr7 (206-346)||(20992311-20992453)
chr7 (206-334)||(14165940-14166069)
chr7 (205-350)||(29545390-29545536)
chr7 (206-347)||(11520661-11520803)
chr7 (206-346)||(15438844-15438989)
chr7 (225-346)||(16207151-16207272)
chr7 (206-349)||(16221823-16221967)
chr7 (206-346)||(23082027-23082167)
chr7 (225-346)||(14927413-14927533)
chr7 (225-346)||(15350879-15350999)
chr7 (206-346)||(645900-646041)
chr7 (206-346)||(10037981-10038121)
chr7 (206-351)||(26132207-26132351)
chr7 (274-346)||(10661630-10661701)
chr7 (206-346)||(21261198-21261338)
chr7 (206-254)||(10661960-10662009)
chr7 (205-346)||(24902874-24903014)
chr7 (286-346)||(23960793-23960853)
chr7 (303-346)||(9567658-9567701)
chr7 (206-251)||(3801868-3801914)
chr7 (205-253)||(11999536-11999586)
chr7 (206-330)||(20924358-20924482)
chr7 (303-348)||(19295517-19295562)
chr7 (206-249)||(10280708-10280752)
[»] chr3 (24 HSPs)
chr3 (205-346)||(13514867-13515009)
chr3 (206-350)||(20626892-20627038)
chr3 (206-350)||(18482623-18482768)
chr3 (206-346)||(23953808-23953949)
chr3 (206-339)||(17135395-17135529)
chr3 (210-346)||(28051906-28052043)
chr3 (205-350)||(21547547-21547693)
chr3 (206-346)||(7028321-7028462)
chr3 (205-346)||(24196293-24196435)
chr3 (205-330)||(13791461-13791587)
chr3 (206-349)||(286151-286294)
chr3 (206-316)||(15572256-15572364)
chr3 (208-346)||(1918496-1918635)
chr3 (232-346)||(18063484-18063598)
chr3 (206-254)||(21253293-21253341)
chr3 (205-254)||(3551730-3551780)
chr3 (276-350)||(6578871-6578944)
chr3 (205-254)||(28052194-28052244)
chr3 (206-254)||(296256-296305)
chr3 (206-254)||(6578572-6578621)
chr3 (205-254)||(44453136-44453187)
chr3 (303-349)||(214443-214489)
chr3 (208-248)||(979634-979675)
chr3 (303-335)||(7478533-7478565)
[»] chr1 (22 HSPs)
chr1 (206-339)||(20200339-20200473)
chr1 (206-330)||(20840514-20840639)
chr1 (206-346)||(24986751-24986892)
chr1 (203-346)||(13166162-13166306)
chr1 (209-346)||(9452174-9452312)
chr1 (206-350)||(11667153-11667298)
chr1 (223-346)||(13150060-13150183)
chr1 (206-346)||(4246806-4246949)
chr1 (270-346)||(17850743-17850818)
chr1 (250-346)||(26971693-26971789)
chr1 (206-346)||(10339410-10339550)
chr1 (206-262)||(22891093-22891150)
chr1 (206-330)||(1626357-1626481)
chr1 (206-346)||(25349480-25349620)
chr1 (206-247)||(17838230-17838272)
chr1 (271-339)||(23477253-23477320)
chr1 (303-346)||(12753828-12753871)
chr1 (205-254)||(12759326-12759376)
chr1 (206-247)||(15803465-15803507)
chr1 (300-346)||(22891146-22891192)
chr1 (137-205)||(41616648-41616714)
chr1 (206-249)||(41330633-41330677)
[»] chr8 (11 HSPs)
chr8 (205-346)||(23540656-23540798)
chr8 (206-330)||(27924702-27924828)
chr8 (242-346)||(45136878-45136982)
chr8 (206-346)||(33962501-33962639)
chr8 (206-350)||(33977823-33977965)
chr8 (206-346)||(22485901-22486042)
chr8 (206-349)||(26537052-26537196)
chr8 (206-346)||(18622429-18622566)
chr8 (206-292)||(22476896-22476983)
chr8 (206-247)||(9997590-9997632)
chr8 (95-205)||(32513383-32513497)
[»] scaffold0185 (1 HSPs)
scaffold0185 (206-346)||(1618-1759)
[»] chr5 (18 HSPs)
chr5 (206-350)||(22404011-22404156)
chr5 (206-346)||(22251291-22251432)
chr5 (206-346)||(24190631-24190772)
chr5 (206-349)||(23757507-23757651)
chr5 (206-349)||(23822963-23823107)
chr5 (206-346)||(26037545-26037686)
chr5 (208-350)||(23419809-23419952)
chr5 (205-291)||(22240227-22240314)
chr5 (206-346)||(23624609-23624749)
chr5 (205-312)||(9420603-9420712)
chr5 (211-346)||(20713999-20714134)
chr5 (206-346)||(38406129-38406269)
chr5 (205-330)||(13941265-13941390)
chr5 (206-346)||(22081942-22082082)
chr5 (205-350)||(26328466-26328611)
chr5 (303-345)||(20740331-20740373)
chr5 (300-346)||(30605036-30605082)
chr5 (307-344)||(9421868-9421905)
[»] chr4 (23 HSPs)
chr4 (205-346)||(10724965-10725107)
chr4 (205-346)||(10938734-10938876)
chr4 (205-346)||(18600909-18601051)
chr4 (206-330)||(16384674-16384799)
chr4 (205-346)||(23399445-23399587)
chr4 (205-321)||(15161752-15161869)
chr4 (205-336)||(25117634-25117766)
chr4 (206-346)||(19182933-19183073)
chr4 (205-346)||(28020071-28020213)
chr4 (237-339)||(33898292-33898393)
chr4 (206-339)||(15623211-15623344)
chr4 (206-346)||(15699587-15699727)
chr4 (206-247)||(33744532-33744574)
chr4 (206-254)||(10683285-10683334)
chr4 (206-254)||(10718512-10718561)
chr4 (206-254)||(10896925-10896974)
chr4 (206-254)||(10932281-10932330)
chr4 (274-346)||(9069712-9069783)
chr4 (206-249)||(41786287-41786331)
chr4 (303-350)||(33744235-33744282)
chr4 (304-346)||(10718243-10718285)
chr4 (304-346)||(10932012-10932054)
chr4 (301-349)||(41786198-41786246)
[»] scaffold0103 (1 HSPs)
scaffold0103 (206-346)||(24928-25069)
[»] scaffold0226 (3 HSPs)
scaffold0226 (206-346)||(17375-17516)
scaffold0226 (206-346)||(26769-26910)
scaffold0226 (206-350)||(6789-6935)
[»] scaffold0069 (1 HSPs)
scaffold0069 (206-346)||(9442-9583)
[»] scaffold0190 (1 HSPs)
scaffold0190 (209-339)||(15875-16005)
[»] scaffold0006 (1 HSPs)
scaffold0006 (224-330)||(88530-88634)
[»] scaffold0129 (1 HSPs)
scaffold0129 (206-346)||(16273-16414)
[»] scaffold0088 (1 HSPs)
scaffold0088 (206-346)||(37358-37497)
[»] chr2 (11 HSPs)
chr2 (206-346)||(24789409-24789550)
chr2 (206-350)||(12911256-12911401)
chr2 (205-339)||(15329095-15329229)
chr2 (206-325)||(22614329-22614449)
chr2 (206-312)||(23759426-23759533)
chr2 (271-346)||(21249515-21249589)
chr2 (271-330)||(21531162-21531220)
chr2 (303-346)||(24311201-24311244)
chr2 (303-346)||(27108211-27108254)
chr2 (303-339)||(24312993-24313029)
chr2 (303-339)||(27111807-27111843)
[»] scaffold0453 (1 HSPs)
scaffold0453 (205-346)||(1250-1392)
[»] scaffold0213 (1 HSPs)
scaffold0213 (206-346)||(7829-7970)
[»] scaffold0059 (1 HSPs)
scaffold0059 (205-346)||(47640-47782)
[»] scaffold0037 (1 HSPs)
scaffold0037 (206-350)||(109509-109654)
[»] scaffold0024 (1 HSPs)
scaffold0024 (206-338)||(159847-159980)
[»] scaffold0259 (1 HSPs)
scaffold0259 (209-330)||(16579-16701)
[»] scaffold0359 (1 HSPs)
scaffold0359 (206-346)||(2658-2798)
[»] scaffold0008 (1 HSPs)
scaffold0008 (206-254)||(36600-36649)
[»] scaffold0035 (2 HSPs)
scaffold0035 (206-247)||(38171-38213)
scaffold0035 (300-345)||(38074-38119)
[»] scaffold1001 (1 HSPs)
scaffold1001 (206-346)||(730-872)
[»] scaffold0034 (1 HSPs)
scaffold0034 (303-346)||(50258-50301)


Alignment Details
Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 109 - 346
Target Start/End: Original strand, 8464820 - 8465058
Alignment:
Q  109 ccattcaaaaattgatatgtgaggtctagattcgtcctcttgaagacaacataaaagtaatgtggataacagctctttcaacaatcctgaaagatcgtgt 208  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||  || ||||||||||||||||||||| ||||||    
T  8464820 ccattcaaaaattgatatgtggggtctagattcgtcctcttgaagacaccataaaagtaatgtggatggcaactctttcaacaatcctgaaaggtcgtgt 8464919  T
Q  209 tgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaagatgt 307  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||    
T  8464920 tgggtatttgtattggctgcattattgctaaaataaatatccttgttgtgtaagttggaaccaatgttccaacatgtgtttaggcctctttttaagatgt 8465019  T
Q  308 tggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  8465020 tggatacaatgttccaacatcctggcacggtttagtgtg 8465058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 13196233 - 13196092
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||| ||||| | |||||    
T  13196233 tgttgggtatttgtattggctgcattattgctaaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttagacatctctataaga 13196134  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||| ||||||||||||||| |||||||| ||||||    
T  13196133 tgttggatacgatgttccaacatcctggcacggttcagtgtg 13196092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 21722658 - 21722799
Alignment:
Q  206 tgttgggtatttgtatt-gctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||||||||| ||||||| || | |||||    
T  21722658 tgttgggtatttgtattagctgcattattgctaaaacaaatatccttgttctgtaagttggaaccaaagttccaacatgtggttaggcaactctgtaaga 21722757  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||||||||||||||||||| ||| |||| ||||||    
T  21722758 tgttggatacaatgttccaacatcctggcatggttcagtgtg 21722799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 11992271 - 11992412
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||| |||| || || | |||||    
T  11992271 tgttgggtatttgtgttggctgcattattgctaaaacaaatatccttgttctgtaagttggaaccaatgttccaacatgtggttagacaactctgtaaga 11992370  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||||||||| ||||||||||||||| || ||||||    
T  11992371 tgttggatacaatgtttcaacatcctagcacgattcagtgtg 11992412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 205 - 346
Target Start/End: Complemental strand, 19168356 - 19168214
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||| | ||      
T  19168356 gtgttgggtatttgtattggctgcattgttgctaaaataaatatccttgatgtgtaagttggaaccaatgttccaacatgtgtttaggcatctctataga 19168257  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||| ||| ||| ||||||||||| |||||||||||||||    
T  19168256 atgttgggtacgatgctccaacatcctggcacggtttagtgtg 19168214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 17235503 - 17235362
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||| ||||  ||||||||||||||||||||||| ||| | |||||    
T  17235503 tgttgggtatttgtattgactgcattgttgctaaaacaaatatctttgttttgtaagttggaatcaatgttccaacatgtgtttaggcgtctctgtaaga 17235404  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||| ||| ||||||||||| |||||||| ||||||    
T  17235403 tgttggatacgatgctccaacatcctggcacggttcagtgtg 17235362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 206 - 349
Target Start/End: Original strand, 20989040 - 20989184
Alignment:
Q  206 tgttgggtatttgtattgc-tgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    ||||||||||||||||||  |||||| |||||||||||||||| |||| ||||||||| |||||||| |||||||||||||||||||||||| | |||||    
T  20989040 tgttgggtatttgtattggatgcattgttgctaaaacaaatattcttgctgtgtaagttggaacaaaagttccaacatgtgtttaggcatctatgtaaga 20989139  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtgtct 349  Q
    | |||||||| |||||| ||||||||  ||||||| |||||||||    
T  20989140 tattggatacgatgttcaaacatcctcacacggttcagtgtgtct 20989184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 13869655 - 13869793
Alignment:
Q  206 tgttgggtatttgtattgctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaagat 305  Q
    |||||| ||||||||| ||| |||| ||||||||||||||||||||| |||  |||| ||||| |||||| |||||||||||||||||||||| ||||||    
T  13869655 tgttggatatttgtatggctacattgttgctaaaacaaatatccttgatgt--aagttggaaccaatgtttcaacatgtgtttaggcatctttgtaagat 13869752  T
Q  306 gttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||| |||| |||||||||||| |||||||| ||||||    
T  13869753 gttggatgcaattttccaacatcctggcacggttcagtgtg 13869793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 206 - 350
Target Start/End: Original strand, 12038958 - 12039105
Alignment:
Q  206 tgttgggtattt-gtattg-ctgcattattgctaaaacaaatatccttgt-tgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaa 302  Q
    |||||||||||| |||||| ||||||||||| |||||||||||||||| | ||||||||| | ||  ||||||||||||||||||||||||||| | |||    
T  12038958 tgttgggtattttgtattgtctgcattattgataaaacaaatatccttatgtgtgtaagttgaaattaatgttccaacatgtgtttaggcatctctgtaa 12039057  T
Q  303 gatgttggatacaatgttccaacatcctagcacggtttagtgtgtctg 350  Q
    |||||||||| ||||||||||||||| | |||||||| ||||||||||    
T  12039058 gatgttggatgcaatgttccaacatcttggcacggttcagtgtgtctg 12039105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 206 - 350
Target Start/End: Complemental strand, 20653979 - 20653833
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgt-tgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||| | ||  ||||||||||||||||||||||||||| | ||||    
T  20653979 tgttgggtatttgtattgtctgcattattgctaaaacaaatatccttatgtgtgtaagttgaaatcaatgttccaacatgtgtttaggcatctctataag 20653880  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtgtctg 350  Q
    |||||||||   ||||||||| ||||| | |||||| ||||||||||    
T  20653879 atgttggatgtgatgttccaagatcctggaacggttcagtgtgtctg 20653833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 209 - 332
Target Start/End: Original strand, 20465165 - 20465290
Alignment:
Q  209 tgggtatttgtattg-ctgcattattgctaaaacaaatatccttgt-tgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaagatg 306  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||  |||| |||| ||||||| ||||||||||||||||||||||||| | |||||||    
T  20465165 tgggtatttgtattgtctgcattattgcaaaaacaaatatccttgaatgtgcaagttggaacaattgttccaacatgtgtttaggcatctctataagatg 20465264  T
Q  307 ttggatacaatgttccaacatcctag 332  Q
    |||||||  |||||||||||||||||    
T  20465265 ttggatatgatgttccaacatcctag 20465290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 25970586 - 25970445
Alignment:
Q  206 tgttgggtatttgtatt-gctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| ||||| | ||||| ||||| ||||||||||||||||||||||| ||| | |||||    
T  25970586 tgttgggtatttgtatttgctgcattgttgctaaaacaaatatctttgttctataagttggaaccaatgttccaacatgtgtttaggcgtctctgtaaga 25970487  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||  ||| ||||||||| | |||||||| ||||||    
T  25970486 tgttggatatgatgctccaacatcttggcacggttcagtgtg 25970445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 25975026 - 25974885
Alignment:
Q  206 tgttgggtatttgtatt-gctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| ||||| | ||||| ||||| ||||||||||||||||||||||| ||| | |||||    
T  25975026 tgttgggtatttgtatttgctgcattgttgctaaaacaaatatctttgttctataagttggaaccaatgttccaacatgtgtttaggcgtctctgtaaga 25974927  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||  ||| ||||||||| | |||||||| ||||||    
T  25974926 tgttggatatgatgctccaacatcttggcacggttcagtgtg 25974885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 205 - 346
Target Start/End: Complemental strand, 33666699 - 33666559
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||  |||| ||||| |||||| |||||||||||||||| |||||  |||    
T  33666699 gtgttgggtatttgtattggctgcattgttgctaaaacaaatatccttgatgt--aagttggaaccaatgtttcaacatgtgtttaggcgtctttggaag 33666602  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||  ||| ||||||||||| |||||||| ||||||    
T  33666601 atgttggatatgatgctccaacatcctggcacggttcagtgtg 33666559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 355
Target Start/End: Complemental strand, 19078049 - 19077902
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    ||||||||||||||||||| ||| ||| || ||||||||||||| |||| ||||||||| |||||    |||||||||||||||||||||| ||| ||||    
T  19078049 gtgttgggtatttgtattggctgaattgtttctaaaacaaatattcttgatgtgtaagttggaac----gttccaacatgtgtttaggcatgtttgtaag 19077954  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtgtctgtgctc 355  Q
    ||||||||||| ||||||||||||| | |||||||| |||||| ||| ||||    
T  19077953 atgttggatacgatgttccaacatcttggcacggttcagtgtgcctgagctc 19077902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 206 - 324
Target Start/End: Original strand, 21705780 - 21705899
Alignment:
Q  206 tgttgggtatttgtattgc-tgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||| | ||||| ||||| || ||||||||||||| ||||||| || | |||||    
T  21705780 tgttgagtatttgtattggatgcattattgctaaaacaaatatccttgttctctaagttggaaccaaagttccaacatgtggttaggcaactctataaga 21705879  T
Q  305 tgttggatacaatgttccaa 324  Q
    ||||||||||||||||||||    
T  21705880 tgttggatacaatgttccaa 21705899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 23879794 - 23879653
Alignment:
Q  206 tgttgggtatttgtatt-gctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||| |||| |||||||| ||||||||||||||||||||| | | ||||| ||||| || ||| |||||||||||||||| ||| |  ||||    
T  23879794 tgttgggtatttctattagctgcattgttgctaaaacaaatatccttgatctataagttggaaccaaagtttcaacatgtgtttaggcgtctctggaaga 23879695  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||| ||| ||||||||||| |||||||| ||||||    
T  23879694 tgttggatacgatgctccaacatcctggcacggttcagtgtg 23879653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 12385109 - 12385249
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaag-taggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||   | |||   ||||||||||||||| ||||||||||| | ||||    
T  12385109 tgttgggtatttgtattggctgcattattgctaaaacaaatatcattgtt-tgtattattggagacaatgttccaacatgt-tttaggcatctctgtaag 12385206  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||    
T  12385207 atgttggatacgatgttccaacatcctggcacggttcagtgtg 12385249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 205 - 346
Target Start/End: Original strand, 19893917 - 19894059
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||| |||||||||||| |||| ||  |||||||||||||||||||||| ||||||| ||||| || | | |||||||||||||||||||| |  |||    
T  19893917 gtgttgcgtatttgtattggctgcgttgctgctaaaacaaatatccttgttctgtaagttggaaccaaagattcaacatgtgtttaggcatctctggaag 19894016  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||| ||| ||||||||| | |||||||| ||||||    
T  19894017 atgttggatacgatgctccaacatcttggcacggttcagtgtg 19894059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 17856104 - 17855963
Alignment:
Q  206 tgttgggtatttgtattgc-tgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    ||||||||||||||||||  |||||| ||||||||||||||||||||| | ||||||| ||||  || |||||||||| ||||||||| ||| |  ||||    
T  17856104 tgttgggtatttgtattggatgcattgttgctaaaacaaatatccttgatctgtaagttggaatcaaagttccaacatttgtttaggcgtctctggaaga 17856005  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||| | ||| | |||||||||||||||||| ||||||    
T  17856004 tgttggatgcgatgcttcaacatcctagcacggttcagtgtg 17855963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 19100785 - 19100675
Alignment:
Q  205 gtgttgggtatttgtatt-gctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||| ||||| ||||| |||||||| ||||||||||||||||||||||| | ||||| ||||  || |||||||||||||||||||||||| | ||||    
T  19100785 gtgttgagtattcgtattagctgcattgttgctaaaacaaatatccttgttctataagttggaatcaaagttccaacatgtgtttaggcatctctataag 19100686  T
Q  304 atgttggatac 314  Q
    |||||||||||    
T  19100685 atgttggatac 19100675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 9280960 - 9281101
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||| | || |||| |||||||||||||||| |||||| ||||||| ||||| || ||| |||||||||||||||| ||| |  ||||    
T  9280960 tgttgggtatttgtatcggctacattgttgctaaaacaaatattcttgttttgtaagttggaaccaaagtttcaacatgtgtttaggcgtctctgaaaga 9281059  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||  ||| ||||||||||| ||||| || ||||||    
T  9281060 tgttggatatgatgctccaacatcctggcacgattcagtgtg 9281101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 205 - 339
Target Start/End: Original strand, 17863723 - 17863858
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaa 302  Q
    |||||| |||||| ||||| ||||||| ||||||||||||||||||||||| ||||  || ||||| ||||||||||||||||||||||||||| | |||    
T  17863723 gtgttgtgtatttctattggctgcattgttgctaaaacaaatatccttgtttgtgtt-gttggaaccaatgttccaacatgtgtttaggcatctctgtaa 17863821  T
Q  303 gatgttggatacaatgttccaacatcctagcacggtt 339  Q
    ||||| |||||  |||||  |||||| ||||||||||    
T  17863822 gatgtcggatatgatgttttaacatcgtagcacggtt 17863858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 29252929 - 29253072
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaa-gtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||| ||||| ||| ||| |||||||||||||||||| |||| ||| | || ||||| |||||||||||||| ||| |||||| | ||||||    
T  29252929 tgttgggtatttatattgactgtattgttgctaaaacaaatatccatgtt-tgtgatgttggaaccaatgttccaacatg-gttcaggcatgtctttaag 29253026  T
Q  304 atgttggatacaa---tgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||| |   |||||||||||||| |||||||| ||||||    
T  29253027 atgttggatacgacgatgttccaacatcctggcacggttcagtgtg 29253072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 285 - 350
Target Start/End: Complemental strand, 25806236 - 25806172
Alignment:
Q  285 gtttaggcatctttttaagatgttggatacaatgttccaacatcctagcacggtttagtgtgtctg 350  Q
    |||||||||||| || |||||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  25806236 gtttaggcatctctt-aagatgttggatacgatgttccaacatcctggcacggttcagtgtgtctg 25806172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 23882029 - 23882089
Alignment:
Q  286 tttaggcatctttttaagatgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||  ||||||| ||||||    
T  23882029 tttaggcatctttgtaagatgttggatacgatgttccaacatcctgacacggttcagtgtg 23882089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 11961280 - 11961234
Alignment:
Q  303 gatgttggatacaatgttccaacatcctagcacggtttagtgtgtct 349  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  11961280 gatgttggatacgatgttccaacatcctggcacggtttagtgtgtct 11961234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 15930099 - 15930239
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||||||||| ||||  |||||||||||||||||| | |||| ||||   | |  |||| ||||| ||||||| || |||||||| | ||||    
T  15930099 tgttgggtatttgtattggctgctatattgctaaaacaaatattcatgtttgtgttgtttgatacaa-tgttcaaacatgt-ttcaggcatctctgtaag 15930196  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    || |||||||| ||||||||||||||| |||||||| ||||||    
T  15930197 atattggatacgatgttccaacatcctggcacggttcagtgtg 15930239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 17525586 - 17525672
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttagg 291  Q
    ||||| |||||||||||| |||| || ||||||||||||||||||||||| | ||||| ||||| || ||| ||| |||||||||||    
T  17525586 tgttgtgtatttgtattggctgctttgttgctaaaacaaatatccttgttctttaagttggaaccaaagtttcaatatgtgtttagg 17525672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 23880944 - 23880990
Alignment:
Q  209 tgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt 254  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||    
T  23880944 tgggtatttgtattggctgcattattgctaaaacaaatatccatgtt 23880990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 19598506 - 19598449
Alignment:
Q  289 aggcatctttttaagatgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||| | ||||||||||||||| |||||||||||||||  ||||||| ||||||    
T  19598506 aggcatctctgtaagatgttggatacgatgttccaacatcctgacacggttcagtgtg 19598449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 26964804 - 26964849
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatcc 249  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||    
T  26964804 gtgttgggtatttgtattggctgcattgttgctaaaacaaatatcc 26964849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 21316890 - 21316938
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgt 253  Q
    |||||||||||||||||| || ||||||||||||||||||||| |||||    
T  21316890 tgttgggtatttgtattggcttcattattgctaaaacaaatattcttgt 21316938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 24542744 - 24542696
Alignment:
Q  207 gttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt 254  Q
    |||| |||||||||||| |||||||||||||||||||||||||| ||||    
T  24542744 gttgagtatttgtattgactgcattattgctaaaacaaatatccatgtt 24542696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 19658761 - 19658687
Alignment:
Q  271 atgttccaacatgtgtttaggcatctttttaagatgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||||||| ||||||||| ||    ||||||||||||  ||||||||||||||||||||| || ||||||    
T  19658761 atgttccaacatgt-tttaggcattttcacgagatgttggatatgatgttccaacatcctagcacgattcagtgtg 19658687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 34991154 - 34991205
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgct-aaaacaaatatccttgtt 254  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||||||||    
T  34991154 gtgttgggtatttgtattgactgcattgttgctaaaaacaaatatccttgtt 34991205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 3566104 - 3566150
Alignment:
Q  209 tgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt 254  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||||    
T  3566104 tgggtatttgtattggctgcattattgctaatacaaatatccatgtt 3566150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 254
Target Start/End: Original strand, 17868220 - 17868269
Alignment:
Q  206 tgttgggtatttgtattgct-gcattattgctaaaacaaatatccttgtt 254  Q
    |||||||||||||||||| | ||||||||||||||| |||||||| ||||    
T  17868220 tgttgggtatttgtattggttgcattattgctaaaataaatatccatgtt 17868269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 254
Target Start/End: Original strand, 17878003 - 17878052
Alignment:
Q  206 tgttgggtatttgtattgct-gcattattgctaaaacaaatatccttgtt 254  Q
    |||||||||||||||||| | ||||||||||||||| |||||||| ||||    
T  17878003 tgttgggtatttgtattggttgcattattgctaaaataaatatccatgtt 17878052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 254
Target Start/End: Complemental strand, 19598574 - 19598530
Alignment:
Q  211 ggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt 254  Q
    |||||||| |||| |||||||||||||||||||||||||| ||||    
T  19598574 ggtatttgaattggctgcattattgctaaaacaaatatccatgtt 19598530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 343
Target Start/End: Complemental strand, 24542465 - 24542425
Alignment:
Q  303 gatgttggatacaatgttccaacatcctagcacggtttagt 343  Q
    |||||||||||| |||||||||||| || ||||||||||||    
T  24542465 gatgttggatacgatgttccaacattctggcacggtttagt 24542425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 3e-51; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 205 - 346
Target Start/End: Complemental strand, 12326722 - 12326580
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||| | ||||    
T  12326722 gtgttgggtatttgtattggctgcattattgctaaaacaaatatccttggtgtgtaagttggaacaaaggttccaacatgtgtttaggcatctctataag 12326623  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||    
T  12326622 atgttggatacgatgttccaacatcctggcacggttcagtgtg 12326580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 206 - 339
Target Start/End: Complemental strand, 15507139 - 15507005
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||| | |||||    
T  15507139 tgttgggtatttgtattggctgcattgttgctaaaacaaatatccttgatgtgtaagttggaaccaatgttccaacatgtgtttaggcatctctataaga 15507040  T
Q  305 tgttggatacaatgttccaacatcctagcacggtt 339  Q
    |||||||||| |||||| ||||||||  |||||||    
T  15507039 tgttggatacgatgttcaaacatcctgacacggtt 15507005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 4459649 - 4459507
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttg-tgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||||| ||| ||| ||| |||||||||||||||||||||||  ||||||| ||||| ||||||||||||| ||||||||||||| | ||||    
T  4459649 tgttgggtatttgtgttggctgtattgttgctaaaacaaatatccttgtttctgtaagttggaaccaatgttccaacatctgtttaggcatctctgtaag 4459550  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||||||||||||||||||||||||| || ||||||    
T  4459549 atgttggatacaatgttccaacatcctagcacgattcagtgtg 4459507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 20992453 - 20992311
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttg-tgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||| ||||| | ||||  ||||| ||||||||||||| | ||||    
T  20992453 tgttgggtatttgtattggctgcattattgctaaaacaaatatccttgtttatgtaagttggaaccagtgttttaacatttgtttaggcatctctgtaag 20992354  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||  ||||||||||||||| |||||||| ||||||    
T  20992353 atgttggatatgatgttccaacatcctggcacggttcagtgtg 20992311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 206 - 334
Target Start/End: Complemental strand, 14166069 - 14165940
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| || |||||||||||||| ||||||||||||| ||||||| ||| | || ||||||||||||| ||||||| || | |||||    
T  14166069 tgttgggtatttgtattggctacattattgctaaaaaaaatatccttgttctgtaagttggagccaaagttccaacatgtggttaggcaactctataaga 14165970  T
Q  305 tgttggatacaatgttccaacatcctagca 334  Q
    ||||||||||||||| ||||||||||||||    
T  14165969 tgttggatacaatgtcccaacatcctagca 14165940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 205 - 350
Target Start/End: Original strand, 29545390 - 29545536
Alignment:
Q  205 gtgttgggtatttgtattgct-gcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaa 302  Q
    ||||||| ||||||||||| | | ||| ||||||||| |||||| |||||| ||||  || ||||| ||||||||||||||||||||||||||| | |||    
T  29545390 gtgttggatatttgtattggttgtattgttgctaaaataaatattcttgtttgtgtt-gttggaactaatgttccaacatgtgtttaggcatctctgtaa 29545488  T
Q  303 gatgttggatacaatgttccaacatcctagcacggtttagtgtgtctg 350  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||    
T  29545489 gatgttggatacaatgttccaacatcctagcatggttcagtgtgtctg 29545536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 206 - 347
Target Start/End: Original strand, 11520661 - 11520803
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||| | ||||| || ||| |||||||||||||||| ||| |  ||||    
T  11520661 tgttgggtatttgtattggctgcattgttgctaaaacaaatatctttgttctgtaatttggaaccaaagtttcaacatgtgtttaggcgtctatggaaga 11520760  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtgt 347  Q
    |||||||||||||| | ||||||||| |||||||| |||||||    
T  11520761 tgttggatacaatgcttcaacatcctggcacggttcagtgtgt 11520803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 15438989 - 15438844
Alignment:
Q  206 tgttgggtatttgtattgct-gcattattgctaaaacaaatat----ccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatcttttt 300  Q
    |||||||||||||||||| | ||||| ||||||||||||||||    ||||| ||||||||| ||||| ||||||| ||||||||||||||||||| | |    
T  15438989 tgttgggtatttgtattggttgcattgttgctaaaacaaatatatatccttgatgtgtaagttggaaccaatgttcaaacatgtgtttaggcatctctgt 15438890  T
Q  301 aagatgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||||||| |||||  ||||||||  ||||||| ||||||    
T  15438889 aagatgttggatacgatgtttaaacatcctgacacggttaagtgtg 15438844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 346
Target Start/End: Original strand, 16207151 - 16207272
Alignment:
Q  225 tgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaagatgttggatacaatgttccaa 324  Q
    |||||| |||||||| |||||||| ||||||||||||| | ||| ||  ||||||||||||||||||||||| | ||||||||||||||  |||||||||    
T  16207151 tgcattgttgctaaaccaaatatctttgttgtgtaagttgaaaccaacattccaacatgtgtttaggcatctctgtaagatgttggatatgatgttccaa 16207250  T
Q  325 catcctagcacggtttagtgtg 346  Q
    |||||| ||| |||| ||||||    
T  16207251 catcctggcatggttcagtgtg 16207272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 349
Target Start/End: Original strand, 16221823 - 16221967
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||| ||  | ||||||| ||||| ||  ||||||||||||||  ||||||| | |||||    
T  16221823 tgttgggtatttgtattggctgcattgttgctaaaataaatatctttcctatgtaagttggaaccaacattccaacatgtgttctggcatctctgtaaga 16221922  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtgtct 349  Q
    |||||||||| ||||||||||||||| ||| | |||| |||||||    
T  16221923 tgttggatacgatgttccaacatcctggcatgatttactgtgtct 16221967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 23082027 - 23082167
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttg-ttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||||||||| |||||||||||||||||||||||||| || ||||| | || ||||   |||||||||||||| ||||||||| | | ||||    
T  23082027 tgttgggtatttgtattggctgcattattgctaaaacaaatatccatgattgtg-atgttggaaactatgttccaacatgt-tttaggcatttctgtaag 23082124  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||  ||||||||||||||| |||||||| ||||||    
T  23082125 atgttggatatgatgttccaacatcctggcacggttcagtgtg 23082167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 225 - 346
Target Start/End: Complemental strand, 14927533 - 14927413
Alignment:
Q  225 tgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaagatgttggatacaatgttcca 323  Q
    ||||||||||||||||||||||||| |||| ||||  || |||   ||||||||||||||| || || ||||| ||||||||||||||||| ||||||||    
T  14927533 tgcattattgctaaaacaaatatccatgtttgtgtt-gttggatacaatgttccaacatgt-ttcagacatctctttaagatgttggatacgatgttcca 14927436  T
Q  324 acatcctagcacggtttagtgtg 346  Q
    ||||||| |||||||||||||||    
T  14927435 acatcctggcacggtttagtgtg 14927413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 225 - 346
Target Start/End: Complemental strand, 15350999 - 15350879
Alignment:
Q  225 tgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaagatgttggatacaatgttcca 323  Q
    ||||||||||||||||||||||||| |||| ||||  || |||   ||||||||||||||| || || ||||| ||||||||||||||||| ||||||||    
T  15350999 tgcattattgctaaaacaaatatccatgtttgtgtt-gttggatacaatgttccaacatgt-ttcagacatctctttaagatgttggatacgatgttcca 15350902  T
Q  324 acatcctagcacggtttagtgtg 346  Q
    ||||||| |||||||||||||||    
T  15350901 acatcctggcacggtttagtgtg 15350879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 646041 - 645900
Alignment:
Q  206 tgttgggtatttgtattgct-gcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| | ||||| ||||||||||||||||||||||| | |||||  |||| || ||| ||||||||||||| || ||| |  || |    
T  646041 tgttgggtatttgtattggttgcattgttgctaaaacaaatatccttgttctctaagttagaaccaaagtttcaacatgtgtttaagcgtctctagaaaa 645942  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||| | ||| | ||||||||| |||||||| ||||||    
T  645941 tgttggatgcgatgcttcaacatcctggcacggttcagtgtg 645900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 10037981 - 10038121
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaa-gtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||||||||| |||||||||||| ||||||||||||| |||| ||||  || |||    |||||||||||||| ||||||||| | | ||||    
T  10037981 tgttgggtatttgtattggctgcattattgcgaaaacaaatatccatgtt-tgtattgttggatactatgttccaacatgt-tttaggcatttctgtaag 10038078  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||| ||||||||||||| || ||| |||| ||||||    
T  10038079 atgttggatataatgttccaacatactggcatggttcagtgtg 10038121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 206 - 351
Target Start/End: Original strand, 26132207 - 26132351
Alignment:
Q  206 tgttgggtatttgtattgctgcattattgctaaaacaaatatccttgttgtgtaag-taggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||| | | ||||||||||||||||||||||| |||| ||| |  | |||    |||||||||||||| || |||||||| | |||||    
T  26132207 tgttgggtatttgtatcggtacattattgctaaaacaaatatccatgtt-tgtgatattggatactatgttccaacatgt-ttcaggcatctctgtaaga 26132304  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtgtctgt 351  Q
    |||||||||  ||||||||||||||| |||||||| |||||| ||||    
T  26132305 tgttggatatgatgttccaacatcctggcacggttcagtgtgcctgt 26132351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 274 - 346
Target Start/End: Complemental strand, 10661701 - 10661630
Alignment:
Q  274 ttccaacatgtgtttaggcatctttttaagatgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||| ||||||||| | | ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  10661701 ttccaacatgt-tttaggcatttatgtaagatgttggatacgatgttccaacatcctagcacggttcagtgtg 10661630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 21261338 - 21261198
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttg-ttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||||||||| |||||| |||||||||| |||||| | || ||||| | || |||    |||||||||||||| ||||||||| | | ||||    
T  21261338 tgttgggtatttgtattggctgcatcattgctaaaataaatattcatgattgtg-atgttggatactatgttccaacatgt-tttaggcatttctgtaag 21261241  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||  ||||||||||||||| |||||||| ||||||    
T  21261240 atgttggatatgatgttccaacatcctggcacggttcagtgtg 21261198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 10662009 - 10661960
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt 254  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  10662009 tgttgggtatttgtattggctgcattattgctaaaacaaatatccatgtt 10661960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 346
Target Start/End: Complemental strand, 24903014 - 24902874
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttg-ttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaa 302  Q
    ||||||| ||||||||||| ||||||||||| |||||||||||||| || ||||| | || |||    |||||||||||||| ||||||||| | |   |    
T  24903014 gtgttggatatttgtattggctgcattattggtaaaacaaatatccatgtttgtg-atgttggatactatgttccaacatgt-tttaggcatttctacga 24902917  T
Q  303 gatgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||||  ||||||||||||||| |||||||| ||||||    
T  24902916 gatgttggatatgatgttccaacatcct-gcacggttcagtgtg 24902874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 23960853 - 23960793
Alignment:
Q  286 tttaggcatctttttaagatgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||| | | ||||||||||||||| ||||||||||||||| ||||| || ||||||    
T  23960853 tttaggcatttctgtaagatgttggatacgatgttccaacatcctggcacgattcagtgtg 23960793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 9567701 - 9567658
Alignment:
Q  303 gatgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||||| |||||||||||||||||||| ||| ||||||    
T  9567701 gatgttggatacgatgttccaacatcctagcacagttcagtgtg 9567658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 3801914 - 3801868
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatcctt 251  Q
    |||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  3801914 tgttggctatttgtattggctgcattgttgctaaaacaaatatcctt 3801868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 11999586 - 11999536
Alignment:
Q  205 gtgttgggtatttgtatt-gctgcattattgct-aaaacaaatatccttgt 253  Q
    |||||||||||||||||| |||||||| ||||| |||||||||||||||||    
T  11999586 gtgttgggtatttgtattagctgcattgttgctaaaaacaaatatccttgt 11999536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 20924358 - 20924482
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||| ||||||||||| ||||||| ||| |||||||||||| | |||| ||||  ||| ||   |||||| ||||||| ||| ||||||||   ||||    
T  20924358 tgttggatatttgtattgtctgcattgttgttaaaacaaatattcatgtttgtgtt-gtaagatgtaatgtttcaacatg-gttcaggcatctccgtaag 20924455  T
Q  304 atgttggatacaatgttccaacatcct 330  Q
    ||||||||||| |||||||||||||||    
T  20924456 atgttggatacgatgttccaacatcct 20924482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 19295562 - 19295517
Alignment:
Q  303 gatgttggatacaatgttccaacatcctagcacggtttagtgtgtc 348  Q
    |||||||||||| ||||||||||||| | |||||||| ||||||||    
T  19295562 gatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 19295517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 249
Target Start/End: Complemental strand, 10280752 - 10280708
Alignment:
Q  206 tgttgggtatttgtatt-gctgcattattgctaaaacaaatatcc 249  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||||    
T  10280752 tgttgggtatttgtattggctgcattgttgctaaaataaatatcc 10280708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 2e-46; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 205 - 346
Target Start/End: Original strand, 13514867 - 13515009
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||||| ||||| |||||||||||||||||||| |||||| | ||||    
T  13514867 gtgttgggtatttgtattggctgcattgttgctaaaacaaatatcctcgatgtgtaagttggaaccaatgttccaacatgtgtttaagcatctctgtaag 13514966  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  13514967 atgttggatacgatgttccaacatcctagcacggttcagtgtg 13515009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 206 - 350
Target Start/End: Original strand, 20626892 - 20627038
Alignment:
Q  206 tgttgggtatttgtattgc-tgcattattgctaaaacaaatatccttgt-tgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    ||||||||||||||||||  ||  ||||||||||||||||||||||||| ||||||||| ||||  ||||||||||||||||||||||||||| | ||||    
T  20626892 tgttgggtatttgtattggatgtgttattgctaaaacaaatatccttgtatgtgtaagttggaatcaatgttccaacatgtgtttaggcatctctgtaag 20626991  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtgtctg 350  Q
    || |||||||||||||||||||||||| |||||||||||||||||||    
T  20626992 atattggatacaatgttccaacatcctggcacggtttagtgtgtctg 20627038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 206 - 350
Target Start/End: Original strand, 18482623 - 18482768
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||| ||||| || ||||||| |||||||||||| ||| | |||||    
T  18482623 tgttgggtatttgtattggctgcattattgctaaaacaaatatcattgttctgtaagttggaaccaaagttccaatatgtgtttaggcgtctctgtaaga 18482722  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtgtctg 350  Q
    |||||||||| ||||| |||||||||  ||||||| ||||||||||    
T  18482723 tgttggatacgatgtttcaacatcctgacacggttcagtgtgtctg 18482768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 23953808 - 23953949
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| ||||| || ||| |||| ||||||||||| ||| |  ||||    
T  23953808 tgttgggtatttgtattggctgcattgttgctaaaacaaatatccttgttctgtaagttggaaccaaagtttcaacgtgtgtttaggcgtctctggaaga 23953907  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||| ||||||||  |||||||||||||||||||| ||||||    
T  23953908 tgttagatacaatcctccaacatcctagcacggttcagtgtg 23953949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 206 - 339
Target Start/End: Original strand, 17135395 - 17135529
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| ||||| || ||| |||||||||||||||| ||| |  ||||    
T  17135395 tgttgggtatttgtattggctgcattgttgctaaaacaaatatccttgttctgtaagttggaaccaaagtttcaacatgtgtttaggcgtctctggaaga 17135494  T
Q  305 tgttggatacaatgttccaacatcctagcacggtt 339  Q
    |||||||||  ||| ||||||||||| ||||||||    
T  17135495 tgttggatatgatgctccaacatcctggcacggtt 17135529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 210 - 346
Target Start/End: Complemental strand, 28052043 - 28051906
Alignment:
Q  210 gggtatttgtattgct-gcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaagatgt 307  Q
    |||||||||||||| | ||||||||||||||||||||||| || || ||||  || ||||| ||||||||||||||||||||||||||| | ||||||||    
T  28052043 gggtatttgtattggttgcattattgctaaaacaaatatctttatttgtgtt-gttggaaccaatgttccaacatgtgtttaggcatctctgtaagatgt 28051945  T
Q  308 tggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||| ||||||||||||||| ||||||||| |||||    
T  28051944 tggatacgatgttccaacatcctggcacggttttgtgtg 28051906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 205 - 350
Target Start/End: Complemental strand, 21547693 - 21547547
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaa 302  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| |||||| ||||  || ||||| |||||||||||||||||||| |||||| | |||    
T  21547693 gtgttgggtatttgtattggctgcattattgctaaaataaatattcttgtttgtgtt-gttggaaccaatgttccaacatgtgtttatgcatctctataa 21547595  T
Q  303 gatgttggatacaatgttccaacatcctagcacggtttagtgtgtctg 350  Q
    |||||||||||| |||||||||| ||||  ||| ||| ||||||||||    
T  21547594 gatgttggatacgatgttccaacttcctgacacagttcagtgtgtctg 21547547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 7028321 - 7028462
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||| ||||| || || ||||||||||||||||| ||| |  ||||    
T  7028321 tgttgggtatttgtattggctgcattgttgctaaaacaaatatctttgttctgtaagttggaaccaaagtgccaacatgtgtttaggcgtctctggaaga 7028420  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||| ||| ||||||||  | |||||||| ||||||    
T  7028421 tgttggatacgatgctccaacattttggcacggttcagtgtg 7028462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 205 - 346
Target Start/End: Complemental strand, 24196435 - 24196293
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    ||||||||||||||||||| ||||||| |||| |||||||||||||||||| | ||||| ||||| || ||| |||||||||||||||| ||| |  |||    
T  24196435 gtgttgggtatttgtattggctgcattgttgcaaaaacaaatatccttgttttctaagttggaaccaaagtttcaacatgtgtttaggcgtctctggaag 24196336  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||| | ||| | ||||||||| |||||||| ||||||    
T  24196335 atgttggatgcgatgcttcaacatcctggcacggttcagtgtg 24196293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 205 - 330
Target Start/End: Complemental strand, 13791587 - 13791461
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    ||||| ||||||| ||||| ||||||| ||||||||||||||||||||||| ||||||| | ||| |||||| |||||||||||||| | ||| |  |||    
T  13791587 gtgttaggtatttttattggctgcattgttgctaaaacaaatatccttgttctgtaagttgaaaccaatgtttcaacatgtgtttagacgtctctggaag 13791488  T
Q  304 atgttggatacaatgttccaacatcct 330  Q
    ||||||||||||||| | |||||||||    
T  13791487 atgttggatacaatgcttcaacatcct 13791461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 206 - 349
Target Start/End: Original strand, 286151 - 286294
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaa-gtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||||||||| |||||| |||||||||| |||||| | |||| ||| | || |||    |||||||||||||| || |||||||| | ||||    
T  286151 tgttgggtatttgtattggctgcatcattgctaaaataaatattcatgtt-tgtgatgttggatactatgttccaacatgt-ttcaggcatctctgtaag 286248  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtgtct 349  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||    
T  286249 atgttggatacgatgttccaacatcctagcacggttcagtgtgtct 286294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 206 - 316
Target Start/End: Original strand, 15572256 - 15572364
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||| | ||||||| ||||| ||||||| ||   |||||||||| ||| | |||||    
T  15572256 tgttgggtatttgtattggctgcattgttgctaaaacaaatatccttgatctgtaagttggaaccaatgttcaaa---gtgtttaggcgtctctgtaaga 15572352  T
Q  305 tgttggatacaa 316  Q
    ||||||||||||    
T  15572353 tgttggatacaa 15572364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 208 - 346
Target Start/End: Original strand, 1918496 - 1918635
Alignment:
Q  208 ttgggtatttgtatt-gctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaagatg 306  Q
    ||||||||||||||| | |||||| ||| ||||||||||||||||||| ||||||| ||||| || ||| ||||||||||||||   ||| |  ||||||    
T  1918496 ttgggtatttgtatttgttgcattgttggtaaaacaaatatccttgttctgtaagttggaaccaaagtttcaacatgtgtttagaggtctctggaagatg 1918595  T
Q  307 ttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||| || | ||| | |||||||||||||||||| ||||||    
T  1918596 ttgtatgcgatgcttcaacatcctagcacggttcagtgtg 1918635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 232 - 346
Target Start/End: Original strand, 18063484 - 18063598
Alignment:
Q  232 ttgctaaaacaaatatccttgt-tgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaagatgttggatacaatgttccaacatcct 330  Q
    |||||||||||||||||||||| ||||   || ||||| |||||| |||| | || |||||||||||| ||||||||||||||| | |||||||||||||    
T  18063484 ttgctaaaacaaatatccttgtatgtggt-gttggaaccaatgtttcaacgtatgattaggcatctttgtaagatgttggatacgacgttccaacatcct 18063582  T
Q  331 agcacggtttagtgtg 346  Q
     |||||||| ||||||    
T  18063583 ggcacggttcagtgtg 18063598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 254
Target Start/End: Original strand, 21253293 - 21253341
Alignment:
Q  206 tgttgggtatttgtattgctgcattattgctaaaacaaatatccttgtt 254  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  21253293 tgttgagtatttgtattgctgcattattgctaaaacaaatatccatgtt 21253341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 3551730 - 3551780
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt 254  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  3551730 gtgttgggtatttgtattggctgcattattgctaaaacaaatatccatgtt 3551780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 350
Target Start/End: Original strand, 6578871 - 6578944
Alignment:
Q  276 ccaacatgtgtttaggcatctttttaagatgttggatacaatgttccaacatcctagcacggtttagtgtgtctg 350  Q
    ||||||||| ||||||||| | | ||||||||||||||| |||||||||||||||  ||||||| ||||||||||    
T  6578871 ccaacatgt-tttaggcatttctgtaagatgttggatacgatgttccaacatcctgacacggttcagtgtgtctg 6578944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 28052244 - 28052194
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt 254  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  28052244 gtgttgggtatttgtattggctgcattattgttaaaacaaatatccttgtt 28052194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 296305 - 296256
Alignment:
Q  206 tgttgggtatttgtattgct-gcattattgctaaaacaaatatccttgtt 254  Q
    |||||||||||||||||| | ||||| |||||||||||||||||||||||    
T  296305 tgttgggtatttgtattggttgcattgttgctaaaacaaatatccttgtt 296256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 254
Target Start/End: Original strand, 6578572 - 6578621
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt 254  Q
    |||||| ||||||||||| |||||||||||||||||||||||||| ||||    
T  6578572 tgttggatatttgtattggctgcattattgctaaaacaaatatccatgtt 6578621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 44453187 - 44453136
Alignment:
Q  205 gtgttgggtatttgtatt-gctgcattattgct-aaaacaaatatccttgtt 254  Q
    |||||||||||||||||| |||||||| ||||| ||||||||||||||||||    
T  44453187 gtgttgggtatttgtattggctgcattgttgctaaaaacaaatatccttgtt 44453136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 214443 - 214489
Alignment:
Q  303 gatgttggatacaatgttccaacatcctagcacggtttagtgtgtct 349  Q
    |||||||||||| ||||||||||||| | |||||||| |||||||||    
T  214443 gatgttggatacgatgttccaacatcttggcacggttcagtgtgtct 214489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 979634 - 979675
Alignment:
Q  208 ttgggtatttgtattg-ctgcattattgctaaaacaaatatc 248  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  979634 ttgggtatttgtattggctacattattgctaaaacaaatatc 979675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 335
Target Start/End: Original strand, 7478533 - 7478565
Alignment:
Q  303 gatgttggatacaatgttccaacatcctagcac 335  Q
    |||||||||||| ||||||||||||||||||||    
T  7478533 gatgttggatacgatgttccaacatcctagcac 7478565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 2e-46; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 206 - 339
Target Start/End: Original strand, 20200339 - 20200473
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| | |||||    
T  20200339 tgttgggtatttgtattggctgcattgttgctaaaacaaatatccttgttgtataagttggaaccaatgttccaacatgtgtttaggcatctctgtaaga 20200438  T
Q  305 tgttggatacaatgttccaacatcctagcacggtt 339  Q
    |||||||||| ||||||||||||||| ||||||||    
T  20200439 tgttggatacgatgttccaacatcctggcacggtt 20200473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 20840514 - 20840639
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| ||||| ||||||||||||| ||||||||||||| | |||||    
T  20840514 tgttgggtatttgtattggctgcattgttgctaaaacaaatatccttgatgtgtaagttggaaccaatgttccaacatatgtttaggcatctctgtaaga 20840613  T
Q  305 tgttggatacaatgttccaacatcct 330  Q
    |||||||||| |||||||||||||||    
T  20840614 tgttggatacgatgttccaacatcct 20840639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 24986892 - 24986751
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgt-tgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||  |||||  || ||||| ||||||||||||||||||||||||||| | ||||    
T  24986892 tgttgggtatttgtattgactgcattattgctaaaataaatatccttgactgtgtt-gttggaaccaatgttccaacatgtgtttaggcatctctgtaag 24986794  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||||||||||||||||| || |||||||| ||||||    
T  24986793 atgttggatacaatgttccaacattctggcacggttcagtgtg 24986751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 203 - 346
Target Start/End: Complemental strand, 13166306 - 13166162
Alignment:
Q  203 tcgtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatcttttta 301  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| ||||| || |||||||||||||||||||| ||| |  |    
T  13166306 tcgtgttgggtatttgtattggctgcattgttgctaaaacaaatatccttgttctgtaagttggaaccaaagttccaacatgtgtttaggcgtctctgga 13166207  T
Q  302 agatgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||| | ||| | ||||||||| | |||||| ||||||    
T  13166206 agatgttggatgcgatgcttcaacatcctggtacggttcagtgtg 13166162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 209 - 346
Target Start/End: Complemental strand, 9452312 - 9452174
Alignment:
Q  209 tgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaagatgt 307  Q
    |||||||||| |||| ||||||| ||||||||||||||||||||||| ||||||| |||||  | ||| |||||||||||||||| ||| | ||||||||    
T  9452312 tgggtatttggattggctgcattgttgctaaaacaaatatccttgttctgtaagttggaaccgaagtttcaacatgtgtttaggcgtctctataagatgt 9452213  T
Q  308 tggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||| ||| |||||||| || |||| ||| ||||||    
T  9452212 tggatacgatgctccaacattctggcacagttcagtgtg 9452174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 206 - 350
Target Start/End: Original strand, 11667153 - 11667298
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||||||||| || |||| ||| | ||||||||||||||||| ||||  || ||||| ||||||||||||||||||||| ||||| | ||||    
T  11667153 tgttgggtatttgtattgactccattgttgattaaacaaatatccttgtttgtgtt-gttggaaccaatgttccaacatgtgtttagacatctctgtaag 11667251  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtgtctg 350  Q
    ||||||||||| ||||||||||||| | |||| ||| ||||||||||    
T  11667252 atgttggatacgatgttccaacatcatggcacagttaagtgtgtctg 11667298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 223 - 346
Target Start/End: Complemental strand, 13150183 - 13150060
Alignment:
Q  223 gctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaagatgttggatacaatgttcc 322  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||||| || ||| |||||||||||||||| ||| |  |||||||||||| | ||| | |    
T  13150183 gctgcattgttgctaaaacaaatatccttgttctgtaagttggaaccaaagtttcaacatgtgtttaggcgtctctggaagatgttggatgcgatgcttc 13150084  T
Q  323 aacatcctagcacggtttagtgtg 346  Q
    |||||||| |||||||| ||||||    
T  13150083 aacatcctggcacggttcagtgtg 13150060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 4246949 - 4246806
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgt-tgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||| |||||  || ||||| |||||| |||||||||||||| | ||| | ||||    
T  4246949 tgttgggtatttgtattggctgcattgttgctaaaacaaatatccttgtatgtgtt-gttggaaccaatgtttcaacatgtgtttagacgtctctgtaag 4246851  T
Q  304 atgttggataca--atgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||||  ||  ||||||||||| ||| |||||||||||    
T  4246850 atgttggatacacgatcctccaacatcctggcatggtttagtgtg 4246806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 346
Target Start/End: Original strand, 17850743 - 17850818
Alignment:
Q  270 aatgttccaacatgtgtttaggcatctttttaagatgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||||||| || || ||||||| |||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  17850743 aatgttccaacatgt-ttcagtcatctttgtaagattttggatacaatgttccaacatcctaacacggttcagtgtg 17850818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 250 - 346
Target Start/End: Original strand, 26971693 - 26971789
Alignment:
Q  250 ttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaagatgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||| ||||||| ||||| || ||| |||||||||||||||| ||| |  |||||||||||||| ||| ||||||||||| |||||||| ||||||    
T  26971693 ttgttttgtaagttggaactaaagtttcaacatgtgtttaggcgtctctggaagatgttggatacgatgctccaacatcctggcacggttcagtgtg 26971789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 10339410 - 10339550
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttg-ttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| || ||| | | || |||    |||||||||||||| ||||||||| | | ||||    
T  10339410 tgttgggtatttgtattggctgcattattgctaaaataaatatccatgattgcg-atgttggatactatgttccaacatgt-tttaggcatttctgtaag 10339507  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||| ||||||||||||| |  ||||||| ||||||    
T  10339508 atgttggatacgatgttccaacatcttgacacggttcagtgtg 10339550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 22891093 - 22891150
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagt 262  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||    
T  22891093 tgttgggtatttgtattggctgcattgttgctaaaataaatatccttgttgtgtaagt 22891150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 206 - 330
Target Start/End: Complemental strand, 1626481 - 1626357
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttg-ttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||| || |||  || |||   ||| ||||||||||| |||| |||| | | ||||    
T  1626481 tgttaggtatttgtattggctgcattattgctaaaacaaatatccttgtttatgt-tgttggatacaatattccaacatgt-tttatgcatttctgtaag 1626384  T
Q  304 atgttggatacaatgttccaacatcct 330  Q
    ||||||||||  |||||||||||||||    
T  1626383 atgttggatatgatgttccaacatcct 1626357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 25349480 - 25349620
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||| ||||| ||||| ||||||||||| |||||||||||||| |||| ||||  || |||   ||||||||||||||| ||||||||| | | ||||    
T  25349480 tgttggctatttatattgactgcattattgttaaaacaaatatccatgtttgtgtt-gttggatacaatgttccaacatgt-tttaggcatttatgtaag 25349577  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||  || |||||||||||| ||| |||| ||||||    
T  25349578 atgttggatatgatattccaacatcctggcatggttcagtgtg 25349620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 247
Target Start/End: Original strand, 17838230 - 17838272
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatat 247  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  17838230 tgttgggtatttgtattggctgcattattgctaaaacaaatat 17838272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 339
Target Start/End: Original strand, 23477253 - 23477320
Alignment:
Q  271 atgttccaacatgtgtttaggcatctttttaagatgttggatacaatgttccaacatcctagcacggtt 339  Q
    |||||||||||||| || |||||||||| ||  |||||| |||||||||||||||||| | ||||||||    
T  23477253 atgttccaacatgt-ttcaggcatctttgtataatgttgaatacaatgttccaacatcttggcacggtt 23477320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 12753871 - 12753828
Alignment:
Q  303 gatgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||    
T  12753871 gatgttggatacgatgttccaacatcctggcacggttcagtgtg 12753828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 12759376 - 12759326
Alignment:
Q  205 gtgttgggtatttgtatt-gctgcattattgctaaaacaaatatccttgtt 254  Q
    ||||||| |||||||||| | ||||||||||||||||||||||||| ||||    
T  12759376 gtgttggttatttgtattagttgcattattgctaaaacaaatatccatgtt 12759326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 247
Target Start/End: Original strand, 15803465 - 15803507
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatat 247  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  15803465 tgttgggtatttgcattggctgcattattgctaaaacaaatat 15803507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 346
Target Start/End: Original strand, 22891146 - 22891192
Alignment:
Q  300 taagatgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||| |||||||||| ||||||||||||||| |||||||| ||||||    
T  22891146 taagttgttggatactatgttccaacatcctggcacggttcagtgtg 22891192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 41616714 - 41616648
Alignment:
Q  137 gattcgtcctcttgaagacaacataaaagtaatgtggataacagctctttcaacaatcctgaaagatcg 205  Q
    ||||| ||||| |||||||||  ||||  ||||||||||  ||||||||||||||||| ||||||||||    
T  41616714 gattcctcctcatgaagacaa--taaatttaatgtggatgtcagctctttcaacaatcttgaaagatcg 41616648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 249
Target Start/End: Original strand, 41330633 - 41330677
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatcc 249  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||||    
T  41330633 tgttaggtatttgtattgactgcattgttgctaaaacaaatatcc 41330677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 5e-44; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 205 - 346
Target Start/End: Original strand, 23540656 - 23540798
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||| |||||||||||||| |||||||||||| |||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||| | ||||    
T  23540656 gtgtggggtatttgtattggctgcattattgcgaaaacaaatatccttgatgtgtaagttggaaccaatgttccaacatgtgtttaggcatctctgtaag 23540755  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||| ||||||| ||||||||||||||| |||| ||||||||||    
T  23540756 atgatggatacgatgttccaacatcctggcacagtttagtgtg 23540798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 27924702 - 27924828
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttg-ttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    ||||| ||||||||| || ||||||||||||| ||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||| | | ||||    
T  27924702 tgttgagtatttgtagtggctgcattattgctgaaacaaatatccttgattgtgtaagttggaaccaatgttccaacatgtgtttaggcatttctgtaag 27924801  T
Q  304 atgttggatacaatgttccaacatcct 330  Q
    ||||||||||  |||||||||||||||    
T  27924802 atgttggataagatgttccaacatcct 27924828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 242 - 346
Target Start/End: Complemental strand, 45136982 - 45136878
Alignment:
Q  242 aaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaagatgttggatacaatgttccaacatcctagcacggttta 341  Q
    |||||||||||||||| |||| ||||  |||||||||||||||||||||| |||| | | ||||||||||||  |||||||||||||||  |||||||||    
T  45136982 aaatatccttgttgtgcaagttggaatcaatgttccaacatgtgtttaggtatctctgttagatgttggatatgatgttccaacatcctgacacggttta 45136883  T
Q  342 gtgtg 346  Q
    |||||    
T  45136882 gtgtg 45136878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 33962639 - 33962501
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||  ||  |||||  || ||||| ||||||||||||||| ||||||||||| | |||||    
T  33962639 tgttgagtatttgtattggctgcattattgctaaaataaatattatt--tgtgtt-gttggaaccaatgttccaacatgtatttaggcatctctgtaaga 33962543  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||  ||||||||||||||| |||| ||| ||||||    
T  33962542 tgttggatattatgttccaacatcctggcacagttcagtgtg 33962501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 206 - 350
Target Start/End: Complemental strand, 33977965 - 33977823
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||  ||  |||||  || ||||| ||||||||||||||| ||||||||||| | |||||    
T  33977965 tgttgagtatttgtattggctgcattattgctaaaataaatattatt--tgtgtt-gttggaaccaatgttccaacatgtatttaggcatctctgtaaga 33977869  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtgtctg 350  Q
    |||||||||  |||||||||||||||  ||| ||| ||||||||||    
T  33977868 tgttggatattatgttccaacatcctgacacagttcagtgtgtctg 33977823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 22486042 - 22485901
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||| ||| ||||||||| ||||||||||||| ||||||| ||||| || ||| |||||||||||||||  ||| |  || |    
T  22486042 tgttgggtatttgtattggctgtattgttgctaaaataaatatccttgttctgtaagttggaaccaaagtttcaacatgtgtttaggtgtctctggaaaa 22485943  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
     ||||||||| ||| ||||||||||| |||| ||| ||||||    
T  22485942 agttggatacgatgctccaacatcctggcacagttcagtgtg 22485901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 206 - 349
Target Start/End: Complemental strand, 26537196 - 26537052
Alignment:
Q  206 tgttgggtatttgtatt-gctgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||||| ||||   ||| ||| ||| ||| ||||||||||||||||| |   ||||    
T  26537196 tgttgggtatttgtattagttgcattattgttaaaacaaatatccttgtttgtgttgttag-aaccaatcttctaacatgtgtttaggcatatccgtaag 26537098  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtgtct 349  Q
    ||||||||||  ||||||||||||| | |||||||| |||||||||    
T  26537097 atgttggatatgatgttccaacatcatggcacggttcagtgtgtct 26537052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 18622566 - 18622429
Alignment:
Q  206 tgttgggtatttgtattgct-gcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| | |||||||||||||||||||||| |||||| |||  || |||    |||||||||||||| || || ||||| | |||||    
T  18622566 tgttgggtatttgtattggttgcattattgctaaaacaaatattcttgtt-tgt--gttggatactatgttccaacatgt-ttcagacatctctgtaaga 18622471  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||| ||||||||||||| | |||||||| ||||||    
T  18622470 tgttggatacgatgttccaacatcttggcacggttcagtgtg 18622429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 206 - 292
Target Start/End: Complemental strand, 22476983 - 22476896
Alignment:
Q  206 tgttgggtatttgtattgct-gcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggc 292  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||||| ||||||| ||| | || ||| ||||||||||||||||    
T  22476983 tgttgggtatttgtattggttgcattgttgctaaaacaaatatctttgttctgtaagttggagccaaagtttcaacatgtgtttaggc 22476896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 247
Target Start/End: Complemental strand, 9997632 - 9997590
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatat 247  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  9997632 tgttgggtatttgtattggctgcattattgctaaaacaaatat 9997590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 205
Target Start/End: Original strand, 32513383 - 32513497
Alignment:
Q  95 actaggtacaccttccattcaaaaattgatatgtgaggtc---tagattcgtcctcttgaagacaacataaaagt-aatgtggataacagctctttcaac 190  Q
    ||||||||| ||| |||||||||||  || |||||||||    | ||||| || ||||||||||| ||| ||||| |||||||||   ||||||||||||    
T  32513383 actaggtactcctaccattcaaaaaccgacatgtgaggttacttggattcatcttcttgaagacatcattaaagtgaatgtggatggaagctctttcaac 32513482  T
Q  191 aatcctgaaagatcg 205  Q
    || ||||||||||||    
T  32513483 aaccctgaaagatcg 32513497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 1618 - 1759
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||| | ||| |||||| |||||||||||||||| ||||| |||||    
T  1618 tgttgggtatttgtattggctgcattattgctaaaacaaatatccctgttctgtaagttgaaaccaatgtttcaacatgtgtttaggcgtctttgtaaga 1717  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||| |||||||||||| || |||||||| ||||||    
T  1718 tgttggatacgatgttccaacattctggcacggttcagtgtg 1759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 5e-41; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 206 - 350
Target Start/End: Original strand, 22404011 - 22404156
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| ||||| || |||||||||||||||||||| ||| |  ||||    
T  22404011 tgttgggtatttgtattggctgcattgttgctaaaacaaatatccttgttctgtaagttggaaccaaagttccaacatgtgtttaggcgtctctggaaga 22404110  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtgtctg 350  Q
    |||||||||||||||||||||||||| ||| |||| ||| ||||||    
T  22404111 tgttggatacaatgttccaacatcctggcatggttcagtatgtctg 22404156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 22251291 - 22251432
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| ||||| || ||| |||||||||||||||| |||||  ||||    
T  22251291 tgttgggtatttgtattggctgcattgttgctaaaacaaatatccttgttttgtaagttggaaccaaagtttcaacatgtgtttaggcgtctttgaaaga 22251390  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||| ||| ||||||||||| |||||||| ||||||    
T  22251391 tgttggatacgatgctccaacatcctggcacggttcagtgtg 22251432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 24190772 - 24190631
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| ||||| || |||||||||||||||||||| |||||  ||||    
T  24190772 tgttgggtatttgtattggctgcattgttgctaaaacaaatatccttgttctgtaagttggaactaaagttccaacatgtgtttaggcgtctttggaaga 24190673  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||| ||| |||||||| || |||||||| ||||||    
T  24190672 tgttggatacgatgctccaacattctggcacggttcagtgtg 24190631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 206 - 349
Target Start/End: Original strand, 23757507 - 23757651
Alignment:
Q  206 tgttgggtatttgtattgc-tgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    ||||||||||||||| ||  |||||| ||||||||||||||||||||  ||||| ||| ||||| ||||||||||||||||||||||||||| | || ||    
T  23757507 tgttgggtatttgtactgggtgcattgttgctaaaacaaatatcctttatgtgttagttggaaccaatgttccaacatgtgtttaggcatctctatatga 23757606  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtgtct 349  Q
    |||||||||| ||||||||||||||| ||||| || |||||||||    
T  23757607 tgttggatacgatgttccaacatcctggcacgattcagtgtgtct 23757651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 206 - 349
Target Start/End: Original strand, 23822963 - 23823107
Alignment:
Q  206 tgttgggtatttgtattgc-tgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    ||||||||||||||| ||  |||||| ||||||||||||||||||||  ||||| ||| ||||| ||||||||||||||||||||||||||| | || ||    
T  23822963 tgttgggtatttgtactgggtgcattgttgctaaaacaaatatcctttatgtgttagttggaaccaatgttccaacatgtgtttaggcatctctatatga 23823062  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtgtct 349  Q
    |||||||||| ||||||||||||||| ||||| || |||||||||    
T  23823063 tgttggatacgatgttccaacatcctggcacgattcagtgtgtct 23823107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 26037686 - 26037545
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||| ||||  || ||||| |||||| |||||||||||||||||||| | ||||    
T  26037686 tgttgggtatttgtattggctgcattattgctaaaacaaatattcttgtttgtgtt-gttggaaccaatgtttcaacatgtgtttaggcatctctgtaag 26037588  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||| |||||| ||||||||||||||| ||| |||| ||||||    
T  26037587 atgtcggatacgatgttccaacatcctggcatggttcagtgtg 26037545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 208 - 350
Target Start/End: Original strand, 23419809 - 23419952
Alignment:
Q  208 ttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaagat 305  Q
    |||||||||||||||| ||||||| ||| |||||||||||| |||||| ||||  || || || |||||| |||||||||||||||| ||| | ||||||    
T  23419809 ttgggtatttgtattggctgcattgttgttaaaacaaatattcttgtttgtgtt-gttggtaccaatgtttcaacatgtgtttaggcgtctctgtaagat 23419907  T
Q  306 gttggatacaatgttccaacatcctagcacggtttagtgtgtctg 350  Q
    ||||||||||||| ||||||||||| |||||||| | ||||||||    
T  23419908 gttggatacaatgctccaacatcctggcacggttcaatgtgtctg 23419952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 205 - 291
Target Start/End: Original strand, 22240227 - 22240314
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttagg 291  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| ||||| || ||| |||||||||||||||    
T  22240227 gtgttgggtatttgtattggctgcattgttgctaaaacaaatatccttgttctgtaagttggaaccaaagtttcaacatgtgtttagg 22240314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 23624749 - 23624609
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttg-ttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| || |||  || ||||| ||||| ||||||||  || | |||| | | ||||    
T  23624749 tgttgggtatttgtattggctgcattattgctaaaacaaatatccttgtttctgt-tgttggaaccaatgtcccaacatg-attcaagcatgtctgtaag 23624652  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||    
T  23624651 atgttggatacgatgttccaacatcctggcacggttcagtgtg 23624609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 205 - 312
Target Start/End: Original strand, 9420603 - 9420712
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaa-caaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaa 302  Q
    |||||| ||||||| |||| ||||||| ||||||||| |||||||||||||  ||||||| ||||| || |||||||||||||||||||||||| | |||    
T  9420603 gtgttgagtatttgcattgactgcatttttgctaaaaacaaatatccttgtcctgtaagttggaactaaagttccaacatgtgtttaggcatctctgtaa 9420702  T
Q  303 gatgttggat 312  Q
    ||||||||||    
T  9420703 gatgttggat 9420712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 20713999 - 20714134
Alignment:
Q  211 ggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaagatgttg 309  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||  | | || |||    |||||||||||||| || |||||||| | |||||||||     
T  20713999 ggtatttgtattggctgcattattgctaaaacaaatatccatgtttaggatgttggatatcatgttccaacatgt-ttcaggcatctctataagatgtta 20714097  T
Q  310 gatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||| ||||||||||||||| | |||||||||||||    
T  20714098 gatacgatgttccaacatcctggaacggtttagtgtg 20714134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 38406269 - 38406129
Alignment:
Q  206 tgttgggtatttgtattgc-tgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    ||||||||||||||||||  |  |||||||||||||||||||| |||||| ||||  || ||||| ||||||||||||||  || |||||| | | ||||    
T  38406269 tgttgggtatttgtattggatttattattgctaaaacaaatattcttgtttgtgtt-gttggaaccaatgttccaacatga-ttcaggcatgtctataag 38406172  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||| |||||||| ||||||||||||||| ||||||    
T  38406171 atgttggatacgatgttccagcatcctagcacggttcagtgtg 38406129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 330
Target Start/End: Original strand, 13941265 - 13941390
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaa 302  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||| |||| ||||  || |||    |||||||||||||| ||||||||| ||| |||    
T  13941265 gtgttgggtttttgtattggctgcattattgctaaaacaaatatccatgtttgtgtt-gttggataccatgttccaacatgt-tttaggcatttttgtaa 13941362  T
Q  303 gatgttggatacaatgttccaacatcct 330  Q
    |||||||||||  |||||||||||||||    
T  13941363 gatgttggatatgatgttccaacatcct 13941390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 22081942 - 22082082
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||| |||| ||||  || | ||  ||||||||||||| | || |||||||| | ||||    
T  22081942 tgttgggtatttgtattggctgtattgttgttaaaacaaatatccatgtttgtgtt-gttgaaatcaatgttccaacatat-ttcaggcatctctgtaag 22082039  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||    
T  22082040 atgttggatacgatgttccaacatcctggcacggttcagtgtg 22082082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 350
Target Start/End: Original strand, 26328466 - 26328611
Alignment:
Q  205 gtgttgggtatttgtattgct-gcattattgctaaaacaaatatccttgt-tgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaa 302  Q
    ||||||||||||| ||||| | |||||||||||||||||||||| | ||| |||||  || ||||| ||||||||||||||| |  ||| |||| | | |    
T  26328466 gtgttgggtatttatattggttgcattattgctaaaacaaatattcatgtatgtgtt-gttggaaccaatgttccaacatgt-tacaggtatctatgtga 26328563  T
Q  303 gatgttggatacaatgttccaacatcctagcacggtttagtgtgtctg 350  Q
    |||||||||||| |||||||||||||| |  | |||| ||||||||||    
T  26328564 gatgttggatacgatgttccaacatcccaatatggttcagtgtgtctg 26328611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 20740331 - 20740373
Alignment:
Q  303 gatgttggatacaatgttccaacatcctagcacggtttagtgt 345  Q
    ||||||||||||||||||||||||||||||||| ||| |||||    
T  20740331 gatgttggatacaatgttccaacatcctagcacagttcagtgt 20740373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 346
Target Start/End: Original strand, 30605036 - 30605082
Alignment:
Q  300 taagatgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||||||| ||||||||||||||| |||||||| ||||||    
T  30605036 taagatgttggatacgatgttccaacatcctggcacggttcagtgtg 30605082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 344
Target Start/End: Original strand, 9421868 - 9421905
Alignment:
Q  307 ttggatacaatgttccaacatcctagcacggtttagtg 344  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  9421868 ttggatacgatgttccaacatcctagcacggttcagtg 9421905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 2e-37; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 205 - 346
Target Start/End: Complemental strand, 10725107 - 10724965
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaa 302  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||  || ||||| ||||||||||||| ||| ||||||||| | |||    
T  10725107 gtgttgggtatttgtattggctgcattattgctaaaacaaatatccttgtttgtgtt-gttggaaccaatgttccaacatatgtgtaggcatctctgtaa 10725009  T
Q  303 gatgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||    
T  10725008 gatgttggatacgatgttccaacatcctggcacagtttagtgtg 10724965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 205 - 346
Target Start/End: Complemental strand, 10938876 - 10938734
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaa 302  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||  || ||||| ||||||||||||| ||| ||||||||| | |||    
T  10938876 gtgttgggtatttgtattggctgcattattgctaaaacaaatatccttgtttgtgtt-gttggaaccaatgttccaacatatgtgtaggcatctctgtaa 10938778  T
Q  303 gatgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||    
T  10938777 gatgttggatacgatgttccaacatcctggcacagtttagtgtg 10938734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 205 - 346
Target Start/End: Original strand, 18600909 - 18601051
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    ||||||||||||||||||| ||| ||| ||||||||||||||||||||||| ||||||| ||||| |||||| |||||||||||||||| ||| |  |||    
T  18600909 gtgttgggtatttgtattggctgtattgttgctaaaacaaatatccttgttctgtaagttggaaccaatgtttcaacatgtgtttaggcgtctgtggaag 18601008  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||| ||| ||||||||||| |||||||| ||||||    
T  18601009 atgttggatacgatgctccaacatcctggcacggttcagtgtg 18601051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 206 - 330
Target Start/End: Complemental strand, 16384799 - 16384674
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||| ||| |  ||||    
T  16384799 tgttgggtatttgtattggctgcattgttgctaaaacaaatatccttgttgtgtaagttgaaaccaatgttccaacatgtgtttaggcgtctctggaaga 16384700  T
Q  305 tgttggatacaatgttccaacatcct 330  Q
    |||||||||| ||| |||||||||||    
T  16384699 tgttggatacgatgctccaacatcct 16384674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 346
Target Start/End: Original strand, 23399445 - 23399587
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||||| ||||| || ||| |||||||||||||||| ||| |  |||    
T  23399445 gtgttgggtatttgtattggctgcattgttgctaaaataaatatccttgttctgtaagttggaaccaaagtttcaacatgtgtttaggcgtctctggaag 23399544  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||| | ||| | ||||||||| |||||||||||||||    
T  23399545 atgttggatgcgatgcttcaacatcctggcacggtttagtgtg 23399587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 205 - 321
Target Start/End: Original strand, 15161752 - 15161869
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaa 302  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||  || ||||| ||||||||||||||||||||||||||| | |||    
T  15161752 gtgttgggtatttgtattggctgcattattgttaaaacaaatatccttgtttgtgtt-gttggaaccaatgttccaacatgtgtttaggcatctctgtaa 15161850  T
Q  303 gatgttggatacaatgttc 321  Q
    |||||||||||| ||||||    
T  15161851 gatgttggatacgatgttc 15161869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 205 - 336
Target Start/End: Complemental strand, 25117766 - 25117634
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    ||||||||||||||||||| ||||||| |||||| |||||||||||||| | ||||||| ||||| || ||| |||||||| ||||||| ||| |  |||    
T  25117766 gtgttgggtatttgtattggctgcattgttgctacaacaaatatccttgatctgtaagttggaaccaaagtttcaacatgtatttaggcgtctctggaag 25117667  T
Q  304 atgttggatacaatgttccaacatcctagcacg 336  Q
    ||||||||||| ||| ||||||||||| |||||    
T  25117666 atgttggatacgatgctccaacatcctggcacg 25117634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 19182933 - 19183073
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttg-ttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||||||||| || |||||||||||||||||||||||||  ||||||  || |||   ||||||||||||||| ||||||||||| | ||||    
T  19182933 tgttgggtatttgtattggctacattattgctaaaacaaatatccttacttgtgtt-gttggatacaatgttccaacatgt-tttaggcatctctgtaag 19183030  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||| ||||||  ||||||| |||||||| ||||||    
T  19183031 atgttggatacgatgttctgacatcctggcacggttcagtgtg 19183073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 205 - 346
Target Start/End: Complemental strand, 28020213 - 28020071
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||| ||||| | ||||||| ||||  || ||| |||||||||||||||| ||| |  |||    
T  28020213 gtgttgggtatttgtattgactgcattgttgctaaaataaataaccttgatctgtaagttggaatcaaagtttcaacatgtgtttaggcgtctctggaag 28020114  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||   ||| | ||||||||| |||||||| ||||||    
T  28020113 atgttggatgtgatgcttcaacatcctggcacggttcagtgtg 28020071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 237 - 339
Target Start/End: Original strand, 33898292 - 33898393
Alignment:
Q  237 aaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaagatgttggatacaatgttccaacatcctagcacg 336  Q
    |||||||||||| ||||| ||||||| ||||| |||||| |||||||||||||||| |||||  |||||||| ||||| ||| ||||||||||| | |||    
T  33898292 aaaacaaatatc-ttgttctgtaagttggaaccaatgtttcaacatgtgtttaggcgtctttggaagatgttagatacgatgctccaacatcctcgtacg 33898390  T
Q  337 gtt 339  Q
    |||    
T  33898391 gtt 33898393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 339
Target Start/End: Complemental strand, 15623344 - 15623211
Alignment:
Q  206 tgttgggtatttgtattgct-gcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||||||||| | |||||||||| |||| |||||||| | || ||||| || |||    ||| |||||||||| ||||||||| | | ||||    
T  15623344 tgttgggtatttgtattggttgcattattgccaaaataaatatccatctttgtgta-gttggatactatgatccaacatgt-tttaggcatttctgtaag 15623247  T
Q  304 atgttggatacaatgttccaacatcctagcacggtt 339  Q
    ||||||||||| ||||||||||||||| ||||||||    
T  15623246 atgttggatacgatgttccaacatcctggcacggtt 15623211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 15699587 - 15699727
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttg-ttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||| ||||||||||||| ||||||| || |||||||||||||||||| ||||||  || |||   |||||||||||||| ||| | |||| |   ||||    
T  15699587 tgtttggtatttgtattggctgcattgttactaaaacaaatatccttgtttgtgt-tgttggatgcaatgttccaacatg-gttcaagcatgtccataag 15699684  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||| | ||||||||||||||| |||| ||| ||||||    
T  15699685 atgttggatccgatgttccaacatcctggcacagttcagtgtg 15699727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 247
Target Start/End: Complemental strand, 33744574 - 33744532
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatat 247  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  33744574 tgttgggtatttgtattggctgcattattgctaaaacaaatat 33744532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 10683334 - 10683285
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt 254  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||||    
T  10683334 tgtttggtatttgtattggctgcattattgctaaaacaaatatccatgtt 10683285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 10718561 - 10718512
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt 254  Q
    |||||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  10718561 tgttgggtatttgtattggctgcattattgctaaagcaaatatccatgtt 10718512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 10896974 - 10896925
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt 254  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||||    
T  10896974 tgtttggtatttgtattggctgcattattgctaaaacaaatatccatgtt 10896925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 10932330 - 10932281
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt 254  Q
    |||||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  10932330 tgttgggtatttgtattggctgcattattgctaaagcaaatatccatgtt 10932281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 346
Target Start/End: Complemental strand, 9069783 - 9069712
Alignment:
Q  274 ttccaacatgtgtttaggcatctttttaagatgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||| ||| ||||| | | ||||||||||||||| ||||||||||||||| | |||||| ||||||    
T  9069783 ttccaacatgt-tttcggcatttctgtaagatgttggatacgatgttccaacatcctggaacggttcagtgtg 9069712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 249
Target Start/End: Complemental strand, 41786331 - 41786287
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatcc 249  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||    
T  41786331 tgttggatatttgtattggctgcattattgctaaaacaaatatcc 41786287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 350
Target Start/End: Complemental strand, 33744282 - 33744235
Alignment:
Q  303 gatgttggatacaatgttccaacatcctagcacggtttagtgtgtctg 350  Q
    |||||||||||  |||||||||||||||||||||||| ||| ||||||    
T  33744282 gatgttggataagatgttccaacatcctagcacggttcagtctgtctg 33744235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 346
Target Start/End: Complemental strand, 10718285 - 10718243
Alignment:
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||    
T  10718285 atgttggatacgatgttccaacatcctggcacggttcagtgtg 10718243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 346
Target Start/End: Complemental strand, 10932054 - 10932012
Alignment:
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||    
T  10932054 atgttggatacgatgttccaacatcctggcacggttcagtgtg 10932012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 41786246 - 41786198
Alignment:
Q  301 aagatgttggatacaatgttccaacatcctagcacggtttagtgtgtct 349  Q
    |||||||||||||  ||||||||||||||| |||||||| ||| |||||    
T  41786246 aagatgttggatatgatgttccaacatcctggcacggttcagtatgtct 41786198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 24928 - 25069
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| ||||| || ||| |||||||||||||||| ||| |  ||||    
T  24928 tgttgggtatttgtattggctgcattgttgctaaaacaaatatccttgttctgtaagttggaaccaaagtttcaacatgtgtttaggcgtctctggaaga 25027  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||| ||| ||||||||||| |||||||| ||||||    
T  25028 tgttggatacgatgctccaacatcctggcacggttcagtgtg 25069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 75; Significance: 2e-34; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 17375 - 17516
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||  || ||||| |||||||||||||||||||||| |||| | ||||    
T  17375 tgttgggtatttgtattgactgcattattgctaaaacaaatatccttgtttgtgtt-gttggaaccaatgttccaacatgtgtttaggtatctctgtaag 17473  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||| ||||  |||||||||||||||| ||||||| ||||||    
T  17474 atgttagatatgatgttccaacatcctaccacggttcagtgtg 17516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 26769 - 26910
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||  || ||||| |||||||||||||||||||||| |||| | ||||    
T  26769 tgttgggtatttgtattgactgcattattgctaaaacaaatatccttgtttgtgtt-gttggaaccaatgttccaacatgtgtttaggtatctctgtaag 26867  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||| ||||  |||||||||||||||| ||||||| ||||||    
T  26868 atgttagatatgatgttccaacatcctaccacggttcagtgtg 26910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 206 - 350
Target Start/End: Original strand, 6789 - 6935
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||||||||| || ||||||||||||| |||||||||||||| ||||  || ||||| ||||||||||||||||||||| ||||||| ||||    
T  6789 tgttgggtatttgtattggctacattattgctaaagcaaatatccttgtttgtgtt-gttggaaccaatgttccaacatgtgtttagccatctttgtaag 6887  T
Q  304 atgttggatacaatgttccaacatcc-tagcacggtttagtgtgtctg 350  Q
    || |||||||  |||||||||||||| | |||||||| ||||||||||    
T  6888 attttggatatgatgttccaacatccttggcacggttcagtgtgtctg 6935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 9583 - 9442
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||||||| ||||||| | ||| || |||||||||| ||||||||||||| | ||||     
T  9583 tgttgggtatttgtgtttactgcattattgctaaaacaaatatccttgttttgtaagttgaaaccaaagttccaacatatgtttaggcatctctgtaagg 9484  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||||||||||||| || | |||||||| ||||||    
T  9483 tgttggatacaatgttccaacttcttggcacggttcagtgtg 9442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 15875 - 16005
Alignment:
Q  209 tgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaagatgt 307  Q
    ||||||||||||||| ||||||||||  ||||| ||||||||||||||||||||| ||||| ||| |||||||| ||||||| |||||| | ||||||||    
T  15875 tgggtatttgtattgactgcattattattaaaataaatatccttgttgtgtaagttggaaccaatattccaacacgtgttta-gcatctctgtaagatgt 15973  T
Q  308 tggatacaatgttccaacatcctagcacggtt 339  Q
    ||||||| ||||||||||||||| ||||||||    
T  15974 tggatacgatgttccaacatcctggcacggtt 16005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 224 - 330
Target Start/End: Complemental strand, 88634 - 88530
Alignment:
Q  224 ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaagatgttggatacaatgttcca 323  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||||||||| |||||||||  | ||||||||||||||||||||||||    
T  88634 ctgcattattgctaaaacaaatatccttgttctgtaagttggaaccaaagttccaacatgtggttaggcatc--tgtaagatgttggatacaatgttcca 88537  T
Q  324 acatcct 330  Q
    |||||||    
T  88536 acatcct 88530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 16414 - 16273
Alignment:
Q  206 tgttgggtatttgtattgct-gcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    ||||||||||||||| || | ||||| ||||||||||||||||||||||| ||||||| ||||| || |||  ||||||||||||||| ||| |  ||||    
T  16414 tgttgggtatttgtaatggttgcattgttgctaaaacaaatatccttgttctgtaagttggaaccaaagtttgaacatgtgtttaggcgtctctggaaga 16315  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||| ||||||||||||||| |||||||| ||||||    
T  16314 tgttggatacgatgttccaacatcctggcacggttcagtgtg 16273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 37497 - 37358
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| |||||||||||||| || ||||||||||| |||  |||| ||| | |||||| |||||||||||||||| ||| | ||| |    
T  37497 tgttgggtatttgtattggctgcattattgctacaaaaaatatccttgatgt--aagttggagccaatgtttcaacatgtgtttaggcgtctctgtaaaa 37400  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||||||||||||||||||  ||||||| ||||||    
T  37399 tgttggatacaatgttccaacatcctgacacggttcagtgtg 37358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 4e-29; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 24789409 - 24789550
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||| ||| ||||||||| ||||||||||||| ||||| | ||||| ||  || |||||||||||||||||||| |  ||||    
T  24789409 tgttgggtatttgtattggctgtattgttgctaaaataaatatccttgttctgtaatttggaaccaaaatttcaacatgtgtttaggcatctctggaaga 24789508  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||| ||| ||||||||||| |||||||| ||||||    
T  24789509 tgttggatacgatgctccaacatcctggcacggttcagtgtg 24789550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 206 - 350
Target Start/End: Complemental strand, 12911401 - 12911256
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||||||| ||||||||||||||||| ||||  ||||||| ||||| || ||| |||||||||||||||| ||| |  ||||    
T  12911401 tgttgggtatttgtattggctgcattgttgctaaaacaaatatcattgtcctgtaagttggaaccaaagtttcaacatgtgtttaggcgtctctggaaga 12911302  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtgtctg 350  Q
    |||||||||| ||| | |||||| ||  ||||||| ||||||||||    
T  12911301 tgttggatacgatgcttcaacattctgacacggttcagtgtgtctg 12911256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 205 - 339
Target Start/End: Complemental strand, 15329229 - 15329095
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaa 302  Q
    ||||||||||||||||||| || |||| |||||||||||||||| | |||| ||||  || ||||| ||||||||||||||  || |||||| | | |||    
T  15329229 gtgttgggtatttgtattggctacattgttgctaaaacaaatattcatgtttgtgtt-gttggaaccaatgttccaacatga-ttcaggcatgtctgtaa 15329132  T
Q  303 gatgttggatacaatgttccaacatcctagcacggtt 339  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  15329131 gatgttggatacgatgttccaacatcctggcacggtt 15329095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 206 - 325
Target Start/End: Complemental strand, 22614449 - 22614329
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||||| | ||| || ||| ||||||| |||||||  ||| |  ||||    
T  22614449 tgttgggtatttgtattggctgcattgttgctaaaataaatatccttgttctgtaagttgaaaccaaagtttcaacatgcgtttaggtgtctctggaaga 22614350  T
Q  305 tgttggatacaatgttccaac 325  Q
    |||||||||| ||| ||||||    
T  22614349 tgttggataccatgctccaac 22614329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 206 - 312
Target Start/End: Complemental strand, 23759533 - 23759426
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||||||| |||||||||||||||| |||||| ||||| |  |||| || ||| |||||||| ||||||| |||||  ||||    
T  23759533 tgttgggtatttgtattggctgcattgttgctaaaacaaatattcttgttctgtaacttagaaccaaagtttcaacatgtatttaggcgtctttggaaga 23759434  T
Q  305 tgttggat 312  Q
    ||||||||    
T  23759433 tgttggat 23759426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 21249515 - 21249589
Alignment:
Q  271 atgttccaacatgtgtttaggcatctttttaagatgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||||||| || |||||| | | ||||||||||||||| ||||||||||||||| |||||||||||||||    
T  21249515 atgttccaacatgt-ttcaggcatttctgtaagatgttggatacgatgttccaacatcctggcacggtttagtgtg 21249589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 21531220 - 21531162
Alignment:
Q  271 atgttccaacatgtgtttaggcatctttttaagatgttggatacaatgttccaacatcct 330  Q
    |||||||||||||| || |||||||| | |||||||||||||||||||||||||||||||    
T  21531220 atgttccaacatgt-ttcaggcatctctgtaagatgttggatacaatgttccaacatcct 21531162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 346
Target Start/End: Original strand, 24311201 - 24311244
Alignment:
Q  303 gatgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||||||||||||||||||||| |||||||| ||||||    
T  24311201 gatgttggatacaatgttccaacatcctggcacggttcagtgtg 24311244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 27108254 - 27108211
Alignment:
Q  303 gatgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||    
T  27108254 gatgttggatacgatgttccaacatcctggcacggttcagtgtg 27108211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 24312993 - 24313029
Alignment:
Q  303 gatgttggatacaatgttccaacatcctagcacggtt 339  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  24312993 gatgttggatacaatgttccaatatcctggcacggtt 24313029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 27111843 - 27111807
Alignment:
Q  303 gatgttggatacaatgttccaacatcctagcacggtt 339  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  27111843 gatgttggatacgatgttccaacatcctggcacggtt 27111807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 205 - 346
Target Start/End: Original strand, 1250 - 1392
Alignment:
Q  205 gtgttgggtatttgtattgct-gcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    ||||||||||||||||||| | | ||| ||||||||| ||||||||||||| ||||||| ||||| || ||| |||||||||||||||| ||| |  |||    
T  1250 gtgttgggtatttgtattggttgtattgttgctaaaataaatatccttgttttgtaagttggaaccaaagtttcaacatgtgtttaggcgtctctggaag 1349  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||  ||| ||||||||||||||| |||| ||||||    
T  1350 atgttggatatgatgctccaacatcctagcatggttcagtgtg 1392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 7829 - 7970
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || ||||  || ||||| |||||||||||||||||||| |||||| | ||||    
T  7829 tgttgggtatttgtattggctgcattattgctaaaacaaatatccttatttgtgtt-gttggaaccaatgttccaacatgtgtttaagcatctctataag 7927  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||| |||| |||||| |||||||  |||| ||| ||||||    
T  7928 atgttgcatacgatgttcgaacatcccggcactgttcagtgtg 7970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 205 - 346
Target Start/End: Original strand, 47640 - 47782
Alignment:
Q  205 gtgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaag 303  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||||||| |||||||  |||| ||  || |||||||||||||||| ||| |  |||    
T  47640 gtgttgggaatttgtattggctgcattgttgctaaaacaaatatccttgttctgtaagttagaaccaaaatttcaacatgtgtttaggcgtctctggaag 47739  T
Q  304 atgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||| ||  ||||||||||| |||||||| ||||||    
T  47740 atgttggatacgatactccaacatcctggcacggttcagtgtg 47782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 206 - 350
Target Start/End: Original strand, 109509 - 109654
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||| |||| ||||||| ||||| || ||| |||||||||||||||| ||| |  ||||    
T  109509 tgttgggtatttgtattggctgtattgttgctaaaacaaatatccctgttctgtaagttggaaccaaagtttcaacatgtgtttaggcgtctctggaaga 109608  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtgtctg 350  Q
    |||| ||| | ||| | ||||||||| | |||||||||||||||||    
T  109609 tgttagatgcgatgcttcaacatcctggaacggtttagtgtgtctg 109654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 338
Target Start/End: Complemental strand, 159980 - 159847
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    ||||| |||||||||||| ||||||| ||||||||||||||||||||||| ||||||| | ||| || ||| |||||||||||||||| ||| |  ||||    
T  159980 tgttgtgtatttgtattggctgcattgttgctaaaacaaatatccttgttctgtaagttgaaaccaaagtttcaacatgtgtttaggcgtctctggaaga 159881  T
Q  305 tgttggatacaatgttccaacatcctagcacggt 338  Q
    |||||||||  |||  |||||||||| |||||||    
T  159880 tgttggatatgatgccccaacatcctggcacggt 159847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 330
Target Start/End: Original strand, 16579 - 16701
Alignment:
Q  209 tgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaagatgt 307  Q
    ||||||||||||||| ||  ||| ||||||||||||||||| ||| ||| |||||  |||  |||||| |||||||||||||||||||||| ||||||||    
T  16579 tgggtatttgtattggctaaattgttgctaaaacaaatatcattgatgtataagttagaaacaatgtttcaacatgtgtttaggcatctttgtaagatgt 16678  T
Q  308 tggatacaatgttccaacatcct 330  Q
    ||||||| ||| || ||||||||    
T  16679 tggatacgatgatctaacatcct 16701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 2798 - 2658
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgttgtgtaagtaggaacaaatgttccaacatgtgtttaggcatctttttaaga 304  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| | ||| || ||| |||||||| || |||| | | || ||||    
T  2798 tgttgggtatttgtattggctgcattgttgctaaaacaaatatccttgttttgtaagttgaaaccaaagtttcaacatgtattcaggcgtatcttgaaga 2699  T
Q  305 tgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||| || | ||| | ||||||| | |||||||| ||||||    
T  2698 tgttgtat-cgatgctacaacatcttggcacggttcagtgtg 2658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 36649 - 36600
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatatccttgtt 254  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  36649 tgttgggtatttgtattggctgcattattgctaaaacaaatatccatgtt 36600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 247
Target Start/End: Complemental strand, 38213 - 38171
Alignment:
Q  206 tgttgggtatttgtattg-ctgcattattgctaaaacaaatat 247  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  38213 tgttgggtatttgtattggctgcattattgctaaaacaaatat 38171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 345
Target Start/End: Complemental strand, 38119 - 38074
Alignment:
Q  300 taagatgttggatacaatgttccaacatcctagcacggtttagtgt 345  Q
    ||||||||||||||| ||||||||||||||| |||| ||| |||||    
T  38119 taagatgttggatacgatgttccaacatcctggcacagttaagtgt 38074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 872 - 730
Alignment:
Q  206 tgttgggtatttg--tattg-ctgcattattgctaaaacaaatatccttgtt-gtgtaagtaggaacaaatgttccaacatgtgtttaggcatcttttta 301  Q
    |||||||||||||  ||||| || |||| |||||||||||||||| | |||| ||||  || ||||| |||||||||  ||| ||| |||||| | | ||    
T  872 tgttgggtatttgagtattgtcttcattgttgctaaaacaaatattcatgtttgtgtt-gttggaactaatgttccaggatg-gttcaggcatgtctgta 775  T
Q  302 agatgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    ||||||||||||| ||||||||||||| | |||||||| ||||||    
T  774 agatgttggatacgatgttccaacatcttggcacggttcagtgtg 730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 346
Target Start/End: Original strand, 50258 - 50301
Alignment:
Q  303 gatgttggatacaatgttccaacatcctagcacggtttagtgtg 346  Q
    |||||||||||| |||||||||||||||||||| ||| ||||||    
T  50258 gatgttggatacgatgttccaacatcctagcacagttcagtgtg 50301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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