View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0809-Insertion-16 (Length: 133)
Name: NF0809-Insertion-16
Description: NF0809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0809-Insertion-16 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 97; Significance: 4e-48; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 8 - 133
Target Start/End: Original strand, 7759799 - 7759924
Alignment:
| Q |
8 |
cctatatgcaatgtattgcgtttaaaatacttctccaaattgtcccatnnnnnnntatttattttgatcagttaagccgcaacatttcaatatatcatat |
107 |
Q |
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| T |
7759799 |
cctatatacaatgtattgcgtttaaaatacttctccaaattgtcccataaaaaaatatttattttgatcagttaagccgcaacatttcaatatatcatat |
7759898 |
T |
|
| Q |
108 |
atattcaaattagtcggatcacctta |
133 |
Q |
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|||||||||||||||||||| ||||| |
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| T |
7759899 |
atattcaaattagtcggatcgcctta |
7759924 |
T |
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