View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0809_high_141 (Length: 252)
Name: NF0809_high_141
Description: NF0809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0809_high_141 |
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Alignment Details
Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 7329615 - 7329373
Alignment:
| Q |
1 |
aatatgttaatgaagagaggaagatgagagtagaggnnnnnnnnnncatgtgaaatgatgaagaagaatgttcagtttcctttcatttccttcccttcta |
100 |
Q |
| |
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|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7329615 |
aatatgttaatgaagagaggaagatgagagtagaggaaaaaaaaaacttgtgaaatgatgaagaagaatgttcagtttcctttcatttccttcccttcta |
7329516 |
T |
|
| Q |
101 |
tgtacatcatcatacaatttgacttcttagtagctacatcattttgactcagttaacgtccatgttcaacgtcacaaattaaaataactaagcgagtgaa |
200 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |
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|
| T |
7329515 |
tgcacatcatcatacaatttgacttcttagtagctacgtcattttgactcagttaatgtccatgttcaacgtcacgaattaaaataactaagcgagtgaa |
7329416 |
T |
|
| Q |
201 |
gagtgaggactttaactgtgttttatcttaattagagaataat |
243 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |
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|
| T |
7329415 |
gagtgaggactttaactgtgttttatcttaattagagactaat |
7329373 |
T |
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