View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0809_high_48 (Length: 439)
Name: NF0809_high_48
Description: NF0809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0809_high_48 |
 |  |
|
[»] scaffold0179 (1 HSPs) |
 |  |  |
|
[»] scaffold0169 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 325; Significance: 0; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 30 - 410
Target Start/End: Complemental strand, 35227137 - 35226758
Alignment:
Q |
30 |
cttcattgaaattttctaagtgcaaattgggtattattcgctcgcatcagtaaagattaattcttgaatgtggtaattgaaagttttagaaaactagtat |
129 |
Q |
|
|
|||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
35227137 |
cttcattgaaattttctaagtgtaaattgggtattattcgctcgcaacagtagagactaattcttgaatgtggtaattgaaagttttagaaaactagtat |
35227038 |
T |
 |
Q |
130 |
ggatattagtgctaagcacgagctagaatttcgtccaacatgacaaagataatcttgtggtgtatcaagtgtcggctacagtccaacattgagtagaaga |
229 |
Q |
|
|
|||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
35227037 |
ggatatcagtgctaagcacgagctagaatttcgtcaaacatgacaaagataatcttgtggtgtatcaagtgtcggctacagtccaacattgagtggaaga |
35226938 |
T |
 |
Q |
230 |
gtggaggttgaacaacatataagtgaaaaaactcatacactcattgccttaaaatattggatgaaaatgtgatatcattctcatttgtgtggttgctatc |
329 |
Q |
|
|
||| |||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
35226937 |
gtgaaggttgaataacatataagtga-aaaactcatacactcagtgccttaaaatattggatgaaaatgtgatatcattctcatttgtgtggttgctatc |
35226839 |
T |
 |
Q |
330 |
tgtctatgagtcaactcacaccagtgttggctccctcggaaggcccaaagatggaaatatagctcgattcaaatttgtggg |
410 |
Q |
|
|
||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
35226838 |
tgtctatgagtcaactcacacaagtgttggctccctcgaaaggcccaaagatggaaatatagctcgattcaaatttgtggg |
35226758 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 121 - 323
Target Start/End: Original strand, 40260213 - 40260415
Alignment:
Q |
121 |
aactagtatggatattagtgctaagcacgagctagaatttcgtccaacatgacaaagataatcttgtggtgtatcaagtgtcggctacagtccaacattg |
220 |
Q |
|
|
||||||||||||||| |||| ||| ||| ||||||| ||| || | ||| |||||||| ||||| |||||||| | | | || ||| ||||||| |
|
|
T |
40260213 |
aactagtatggatatctgtgccaagtacgggctagaacttcttcatatttgaggaagataatgttgtgatgtatcaaatataagttatagtttaacattg |
40260312 |
T |
 |
Q |
221 |
agtagaagagtggaggttgaacaacatataagtgaaaaaactcatacactcattgccttaaaatattggatgaaaatgtgatatcattctcatttgtgtg |
320 |
Q |
|
|
||||||||| || ||||||||||||||||||||||||||| | ||||||| | |||||||||||||||| |||||||||| |||| |||| ||||||||| |
|
|
T |
40260313 |
agtagaagattgaaggttgaacaacatataagtgaaaaaattgatacacttagtgccttaaaatattgggtgaaaatgtggtatcgttcttatttgtgtg |
40260412 |
T |
 |
Q |
321 |
gtt |
323 |
Q |
|
|
||| |
|
|
T |
40260413 |
gtt |
40260415 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 35223013 - 35222921
Alignment:
Q |
30 |
cttcattgaaattttctaagtgcaaattgggtattattcgctcgcatcagtaaagattaattcttgaatgtggtaattgaaagttttagaaaa |
122 |
Q |
|
|
||||||| ||||||||||| || |||| |||||||||||||| || || |||| || ||||| ||| ||||||||||||||||||||||| |
|
|
T |
35223013 |
cttcattaaaattttctaaatgtaaatatggtattattcgctcacaacaacgaagactatttcttaaatatggtaattgaaagttttagaaaa |
35222921 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 377
Target Start/End: Complemental strand, 30369985 - 30369906
Alignment:
Q |
299 |
tgatatcattctcatttgtgtggttgctatctgt-ctatgagtcaactcacaccagtgttggctccctcggaaggcccaa |
377 |
Q |
|
|
||||||||||||||||||| |||||| | ||||| | ||| ||||| || |||||||||||||||||| ||||||||| |
|
|
T |
30369985 |
tgatatcattctcatttgtctggttgttctctgtgcaatgggtcaatccatgccagtgttggctccctcgtaaggcccaa |
30369906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 377
Target Start/End: Complemental strand, 37251408 - 37251329
Alignment:
Q |
299 |
tgatatcattctcatttgtgtggttgctatctgt-ctatgagtcaactcacaccagtgttggctccctcggaaggcccaa |
377 |
Q |
|
|
||||||||||||||||||| |||||| | ||||| | ||| ||||| || |||||||||||||||||| ||||||||| |
|
|
T |
37251408 |
tgatatcattctcatttgtctggttgttctctgtgcaatgggtcaatccatgccagtgttggctccctcgtaaggcccaa |
37251329 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 15343368 - 15343328
Alignment:
Q |
282 |
aatattggatgaaaatgtgatatcattctcatttgtgtggt |
322 |
Q |
|
|
|||||||||||||||| || ||||||||| ||||||||||| |
|
|
T |
15343368 |
aatattggatgaaaatatgctatcattctgatttgtgtggt |
15343328 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 15432433 - 15432393
Alignment:
Q |
282 |
aatattggatgaaaatgtgatatcattctcatttgtgtggt |
322 |
Q |
|
|
|||||||||||||||| || ||||||||| ||||||||||| |
|
|
T |
15432433 |
aatattggatgaaaatatgctatcattctgatttgtgtggt |
15432393 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 15523737 - 15523697
Alignment:
Q |
282 |
aatattggatgaaaatgtgatatcattctcatttgtgtggt |
322 |
Q |
|
|
|||||||||||||||| || ||||||||| ||||||||||| |
|
|
T |
15523737 |
aatattggatgaaaatatgctatcattctgatttgtgtggt |
15523697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 176 - 410
Target Start/End: Complemental strand, 3532412 - 3532179
Alignment:
Q |
176 |
agataatcttgtggtgtatcaagtgtcggctacagtccaacattgagtagaagagtggaggttgaacaacatataagtgaaaaaactcatacactcattg |
275 |
Q |
|
|
|||||||| |||| ||||| |||||||||||||||||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||||| | |
|
|
T |
3532412 |
agataatcatgtgatgtat-aagtgtcggctacagtccaacattgactataagcgtggaggttgaacaacataaaagtgaaaaaactcatacacttagga |
3532314 |
T |
 |
Q |
276 |
ccttaaaatattggatgaaaatgtgatatcattctcatttgtgtggttgctatctgtctatgagtcaactcacaccagtgttggctccctcggaaggccc |
375 |
Q |
|
|
||||||||||||| |||||||||| ||||| |||||||||||||||| || ||| ||| | ||||||||||||||||||||| || |||||||||||| |
|
|
T |
3532313 |
ccttaaaatattgagtgaaaatgtggtatcaatctcatttgtgtggtttctctctatctttaagtcaactcacaccagtgttgcctttctcggaaggccc |
3532214 |
T |
 |
Q |
376 |
aaagatggaaatatagctcgattcaaatttgtggg |
410 |
Q |
|
|
|||| ||| || ||||| |||||||| |||||||| |
|
|
T |
3532213 |
aaaggtgggaacatagcccgattcaactttgtggg |
3532179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 3838412 - 3838298
Alignment:
Q |
209 |
agtccaacattgagtagaagagtggaggttgaacaacatataagtgaaaaaactcatacactcattgccttaaaatattggatgaaaatgtgatatcatt |
308 |
Q |
|
|
|||| |||||||||||||||| || ||||||||||||||||||||||||||| | ||||||| | |||||||||||||||||||||||||| |||| || |
|
|
T |
3838412 |
agtctaacattgagtagaagattgaaggttgaacaacatataagtgaaaaaattgatacacttagcgccttaaaatattggatgaaaatgtggtatcgtt |
3838313 |
T |
 |
Q |
309 |
ctcatttgtgtggtt |
323 |
Q |
|
|
|| |||| ||||||| |
|
|
T |
3838312 |
cttatttttgtggtt |
3838298 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 47782918 - 47782989
Alignment:
Q |
192 |
tatcaagtgtcggctacagtccaacattgagtagaagagtggaggttgaacaacatataagtgaaaaaactc |
263 |
Q |
|
|
||||||||||| | ||| ||| |||||||| || |||||| || ||||||||||| ||| |||||||||||| |
|
|
T |
47782918 |
tatcaagtgtcagttacggtctaacattgaatataagagttgaagttgaacaacaaataggtgaaaaaactc |
47782989 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 63; Significance: 3e-27; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 175 - 321
Target Start/End: Complemental strand, 52543299 - 52543153
Alignment:
Q |
175 |
aagataatcttgtggtgtatcaagtgtcggctacagtccaacattgagtagaagagtggaggttgaacaacatataagtgaaaaaactcatacactcatt |
274 |
Q |
|
|
|||||||| ||||| |||||||| | | | || |||| |||||||||||||||| || ||||||||||||||||||||||||| | ||||||| | | |
|
|
T |
52543299 |
aagataatgttgtgatgtatcaaatataagttatagtctaacattgagtagaagattgaaggttgaacaacatataagtgaaaatataaatacacttagt |
52543200 |
T |
 |
Q |
275 |
gccttaaaatattggatgaaaatgtgatatcattctcatttgtgtgg |
321 |
Q |
|
|
||||||||||||||| |||||||||| |||| |||| |||||||||| |
|
|
T |
52543199 |
gccttaaaatattgggtgaaaatgtggtatcgttcttatttgtgtgg |
52543153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 281705 - 281799
Alignment:
Q |
231 |
tggaggttgaacaacatataagtgaaaaaa--ctcatacactcattgccttaaaatattggatgaaaatgtgatatcattctcatttgtgtggttg |
324 |
Q |
|
|
||||||| ||| |||| ||||||||||||| |||||| ||| | |||||||||| ||||||||| ||| || |||||||||| ||||||||||| |
|
|
T |
281705 |
tggaggtcgaagaacaaataagtgaaaaaaaactcatatactaaa-gccttaaaattttggatgaagatgcgacatcattctcacttgtgtggttg |
281799 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 377
Target Start/End: Original strand, 55049873 - 55049952
Alignment:
Q |
299 |
tgatatcattctcatttgtgtggttgctatctgt-ctatgagtcaactcacaccagtgttggctccctcggaaggcccaa |
377 |
Q |
|
|
||||||||||||||||||| |||||| | ||||| | ||| ||||| || |||||||||||||||||| ||||||||| |
|
|
T |
55049873 |
tgatatcattctcatttgtctggttgttctctgtgcaatgggtcaatccatgccagtgttggctccctcgtaaggcccaa |
55049952 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 326
Target Start/End: Complemental strand, 8057952 - 8057912
Alignment:
Q |
286 |
ttggatgaaaatgtgatatcattctcatttgtgtggttgct |
326 |
Q |
|
|
||||||||| ||||||||||||||| |||| |||||||||| |
|
|
T |
8057952 |
ttggatgaagatgtgatatcattcttatttatgtggttgct |
8057912 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 214 - 323
Target Start/End: Original strand, 44904680 - 44904788
Alignment:
Q |
214 |
aacattgagtagaagagtggaggttgaacaacatataagtgaaaaaactcatacactcattgccttaaaatattggatgaaaatgtgatatcattctcat |
313 |
Q |
|
|
|||||||||||||||| || ||||||||||||||||||||| ||||| | ||||||| | |||| ||||||||||| |||||||||| |||| |||| || |
|
|
T |
44904680 |
aacattgagtagaagattgaaggttgaacaacatataagtg-aaaaattgatacacttagtgccataaaatattgggtgaaaatgtggtatcgttcttat |
44904778 |
T |
 |
Q |
314 |
ttgtgtggtt |
323 |
Q |
|
|
|||||||||| |
|
|
T |
44904779 |
ttgtgtggtt |
44904788 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 312
Target Start/End: Original strand, 27879615 - 27879744
Alignment:
Q |
184 |
ttgtggtgtatcaagtgtcggctacagtccaacattgagtagaagagtggaggttgaacaacatat-aagtgaaaaaactcatacactcattgccttaaa |
282 |
Q |
|
|
||||| ||||||||||||||| || |||| |||||| | || ||||||||||||||||||||| || || |||||| ||||||| | | || ||||| |
|
|
T |
27879615 |
ttgtgatgtatcaagtgtcggttaaagtctaacattaaataaaagagtggaggttgaacaacaaataaattgaaaatactcatatatttatgcttttaaa |
27879714 |
T |
 |
Q |
283 |
atattggatgaaaatgtgatatcattctca |
312 |
Q |
|
|
|| ||||||||| ||||| ||||||||||| |
|
|
T |
27879715 |
attttggatgaagatgtggtatcattctca |
27879744 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 191 - 326
Target Start/End: Original strand, 10175627 - 10175765
Alignment:
Q |
191 |
gtatcaagtgtcggctacagtccaacattgagtagaagagtggaggttgaacaacatataagtg----aaaaaactcatacactcattgccttaaaatat |
286 |
Q |
|
|
|||| ||||||| | || ||||||||||| | || |||||| |||||||||||||| ||||||| |||||||||||| ||| | ||||||||||| |
|
|
T |
10175627 |
gtattaagtgtcagttaaagtccaacattaaataaaagagtagaggttgaacaacaaataagtggaaaaaaaaactcatatactt-taaccttaaaatat |
10175725 |
T |
 |
Q |
287 |
tggatgaaaatgtgatatcattctcatttgtgtggttgct |
326 |
Q |
|
|
||||| | ||||||||||||||| ||||||||| ||||| |
|
|
T |
10175726 |
aggatgtatatgtgatatcattcttatttgtgtgtttgct |
10175765 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 309
Target Start/End: Original strand, 42313358 - 42313482
Alignment:
Q |
184 |
ttgtggtgtatcaagtgtcggctacagtccaacattgagtagaagagtggaggttgaacaacatataagtgaaaaaactcatacactcattgccttaaaa |
283 |
Q |
|
|
||||| ||||||||||||| | || || |||| |||| || ||||||||||| ||||||||| || ||||||||||| |||| ||| | ||||||||| |
|
|
T |
42313358 |
ttgtgatgtatcaagtgtcagttaaagcccaatattggataaaagagtggaggatgaacaacacattagtgaaaaaacacatatactta-agccttaaaa |
42313456 |
T |
 |
Q |
284 |
tattggatgaaaatgtgatatcattc |
309 |
Q |
|
|
||||||||| ||||| ||||||| |
|
|
T |
42313457 |
atttggatgaagatgtggcatcattc |
42313482 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 394
Target Start/End: Complemental strand, 7333179 - 7333083
Alignment:
Q |
299 |
tgatatcattctcatttgtgtggttgctatctgt-ctatgagtcaactcacaccagtgttggctccctcggaaggcccaaagatggaaatatagctc |
394 |
Q |
|
|
||||||||||||||||||| |||||| | ||||| | ||| ||||| || |||||||||||||||||| ||||||||| |||| | |||||||| |
|
|
T |
7333179 |
tgatatcattctcatttgtctggttgttctctgtgcaatgggtcaatccatgccagtgttggctccctcgtaaggcccaacaatggtattatagctc |
7333083 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 377
Target Start/End: Original strand, 4061987 - 4062066
Alignment:
Q |
299 |
tgatatcattctcatttgtgtggttgctatctgt-ctatgagtcaactcacaccagtgttggctccctcggaaggcccaa |
377 |
Q |
|
|
||||||||||||||||||| |||||| | ||||| | ||| ||||| || |||||||||||||||||| ||||||||| |
|
|
T |
4061987 |
tgatatcattctcatttgtctggttgttctctgtgcaatgggtcaatccatgccagtgttggctccctcgtaaggcccaa |
4062066 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 320
Target Start/End: Complemental strand, 42312373 - 42312280
Alignment:
Q |
226 |
aagagtggaggttgaacaacatataagtgaaaaaactcatacactcattgccttaaaatattggatgaaaatgtgatatcattctcatttgtgtg |
320 |
Q |
|
|
||||||||| | | ||||||| |||||||||||| ||||| ||| | |||||||||| ||||||||| ||| || |||||||||| ||||||| |
|
|
T |
42312373 |
aagagtggaagataaacaacaaataagtgaaaaagttcatatactta-agccttaaaattttggatgaagatgcgacatcattctcacttgtgtg |
42312280 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 310
Target Start/End: Original strand, 36719831 - 36719931
Alignment:
Q |
209 |
agtccaacattgagtagaagagtggaggttgaacaacatataagtgaaaaaactcatacactcattgccttaaaatattggatgaaaatgtgatatcatt |
308 |
Q |
|
|
||||| ||||||| || |||||| ||||||||||||| ||||| |||| |||| ||| ||||| || |||||| ||||||||| ||||||||||||| |
|
|
T |
36719831 |
agtcccacattgaatataagagtataggttgaacaacaaataagggaaacaacttatatactca-ggctttaaaaagttggatgaagatgtgatatcatt |
36719929 |
T |
 |
Q |
309 |
ct |
310 |
Q |
|
|
|| |
|
|
T |
36719930 |
ct |
36719931 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0179 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0179
Description:
Target: scaffold0179; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 263
Target Start/End: Original strand, 30667 - 30737
Alignment:
Q |
193 |
atcaagtgtcggctacagtccaacattgagtagaagagtggaggttgaacaacatataagtgaaaaaactc |
263 |
Q |
|
|
|||||||||| | |||| ||||||||||| ||| |||||| ||||| ||||| ||||||||| ||||||| |
|
|
T |
30667 |
atcaagtgtcagttacattccaacattgaataggagagtgaaggttaaacaatatataagtgggaaaactc |
30737 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0169 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0169
Description:
Target: scaffold0169; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 326
Target Start/End: Original strand, 2113 - 2161
Alignment:
Q |
278 |
ttaaaatattggatgaaaatgtgatatcattctcatttgtgtggttgct |
326 |
Q |
|
|
||||||| |||||||||||| |||||||||||||| || |||| ||||| |
|
|
T |
2113 |
ttaaaattttggatgaaaatatgatatcattctcacttatgtgattgct |
2161 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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