View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0809_low_124 (Length: 318)

Name: NF0809_low_124
Description: NF0809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0809_low_124
NF0809_low_124
[»] chr7 (43 HSPs)
chr7 (115-236)||(37109847-37109968)
chr7 (113-236)||(17842651-17842774)
chr7 (115-244)||(27283719-27283848)
chr7 (116-240)||(38258521-38258645)
chr7 (113-240)||(18797302-18797427)
chr7 (113-230)||(32821124-32821241)
chr7 (113-240)||(30055499-30055627)
chr7 (115-229)||(7334769-7334883)
chr7 (116-228)||(24211717-24211829)
chr7 (114-240)||(31579125-31579256)
chr7 (115-230)||(4582894-4583009)
chr7 (115-240)||(37346997-37347122)
chr7 (147-229)||(38053493-38053575)
chr7 (114-240)||(43686015-43686140)
chr7 (115-240)||(5657542-5657667)
chr7 (113-225)||(12390706-12390818)
chr7 (117-230)||(27421450-27421563)
chr7 (155-240)||(10481619-10481705)
chr7 (117-227)||(23111167-23111277)
chr7 (105-225)||(9355902-9356022)
chr7 (115-230)||(31520794-31520909)
chr7 (115-225)||(6546494-6546604)
chr7 (116-230)||(48928634-48928748)
chr7 (142-230)||(26980325-26980413)
chr7 (117-240)||(29173518-29173640)
chr7 (141-230)||(48928367-48928456)
chr7 (114-230)||(21991610-21991726)
chr7 (114-230)||(32432431-32432542)
chr7 (115-230)||(8861260-8861375)
chr7 (115-230)||(10359285-10359400)
chr7 (115-230)||(12165727-12165842)
chr7 (113-240)||(26524388-26524515)
chr7 (117-226)||(44413454-44413564)
chr7 (113-230)||(22687215-22687329)
chr7 (114-160)||(241024-241070)
chr7 (147-230)||(43925113-43925192)
chr7 (117-229)||(11071182-11071295)
chr7 (116-240)||(33688323-33688446)
chr7 (118-162)||(34095888-34095932)
chr7 (115-230)||(15612830-15612944)
chr7 (117-170)||(8299192-8299245)
chr7 (115-199)||(37704143-37704227)
chr7 (115-163)||(8133561-8133609)
[»] chr3 (47 HSPs)
chr3 (114-240)||(3655262-3655388)
chr3 (114-230)||(40552329-40552445)
chr3 (115-229)||(20373367-20373481)
chr3 (115-240)||(51213041-51213166)
chr3 (115-240)||(37203058-37203183)
chr3 (114-230)||(26941330-26941446)
chr3 (113-225)||(47481511-47481623)
chr3 (111-229)||(48354928-48355046)
chr3 (113-230)||(34132924-34133041)
chr3 (115-240)||(37157699-37157823)
chr3 (117-230)||(46297832-46297945)
chr3 (128-230)||(29099359-29099461)
chr3 (113-230)||(35844315-35844432)
chr3 (111-240)||(4761709-4761840)
chr3 (141-228)||(54505825-54505912)
chr3 (117-227)||(54828774-54828883)
chr3 (147-228)||(21009874-21009955)
chr3 (118-227)||(22446138-22446247)
chr3 (115-240)||(4015451-4015576)
chr3 (114-230)||(7327552-7327669)
chr3 (141-240)||(11357424-11357524)
chr3 (161-240)||(42506135-42506214)
chr3 (113-195)||(46994756-46994837)
chr3 (113-230)||(21193595-21193712)
chr3 (141-230)||(44186571-44186660)
chr3 (147-227)||(3362276-3362356)
chr3 (114-240)||(52040982-52041109)
chr3 (113-230)||(22450957-22451074)
chr3 (115-200)||(44891498-44891582)
chr3 (129-205)||(2613895-2613971)
chr3 (114-230)||(11466814-11466930)
chr3 (113-229)||(39282642-39282757)
chr3 (115-163)||(49359628-49359676)
chr3 (113-181)||(55343403-55343471)
chr3 (116-163)||(19606914-19606961)
chr3 (112-225)||(43975963-43976073)
chr3 (112-162)||(20108102-20108152)
chr3 (140-230)||(24489032-24489122)
chr3 (113-163)||(40640634-40640684)
chr3 (128-246)||(40935995-40936113)
chr3 (158-200)||(41585407-41585449)
chr3 (116-165)||(11835741-11835790)
chr3 (154-199)||(33698218-33698263)
chr3 (128-232)||(53229220-53229325)
chr3 (116-172)||(29163839-29163895)
chr3 (145-230)||(45174524-45174611)
chr3 (115-163)||(47930666-47930714)
[»] chr1 (48 HSPs)
chr1 (114-230)||(18422646-18422762)
chr1 (115-240)||(30327007-30327132)
chr1 (113-232)||(15382927-15383046)
chr1 (144-240)||(51128884-51128980)
chr1 (113-256)||(32267028-32267171)
chr1 (128-230)||(37451295-37451397)
chr1 (115-244)||(23999343-23999472)
chr1 (117-240)||(15752027-15752150)
chr1 (116-240)||(10922724-10922848)
chr1 (113-229)||(37618960-37619078)
chr1 (114-227)||(19899837-19899950)
chr1 (114-230)||(30254419-30254534)
chr1 (117-240)||(28769651-28769773)
chr1 (113-229)||(8222125-8222238)
chr1 (114-240)||(10182063-10182189)
chr1 (113-229)||(1547281-1547397)
chr1 (114-230)||(2959743-2959859)
chr1 (140-240)||(28564836-28564936)
chr1 (115-227)||(42721035-42721147)
chr1 (113-230)||(48620631-48620748)
chr1 (114-197)||(30254853-30254936)
chr1 (117-230)||(238578-238690)
chr1 (140-227)||(9903122-9903209)
chr1 (113-232)||(34012440-34012559)
chr1 (115-227)||(38823210-38823322)
chr1 (115-240)||(21289661-21289793)
chr1 (152-230)||(32216088-32216166)
chr1 (113-230)||(11742415-11742532)
chr1 (112-197)||(16415638-16415723)
chr1 (128-240)||(47279198-47279310)
chr1 (114-201)||(25160365-25160451)
chr1 (115-240)||(7079118-7079254)
chr1 (147-197)||(27763408-27763458)
chr1 (147-200)||(46931439-46931492)
chr1 (115-230)||(27267264-27267376)
chr1 (115-197)||(3309144-3309226)
chr1 (147-229)||(27563971-27564053)
chr1 (113-230)||(3534926-3535043)
chr1 (118-162)||(45319610-45319654)
chr1 (115-230)||(31621618-31621733)
chr1 (128-230)||(14758050-14758152)
chr1 (113-179)||(22170748-22170814)
chr1 (115-165)||(27227607-27227657)
chr1 (114-163)||(13876919-13876968)
chr1 (147-240)||(40884841-40884934)
chr1 (115-195)||(47682595-47682673)
chr1 (113-162)||(49410558-49410607)
chr1 (113-209)||(15168083-15168179)
[»] chr6 (18 HSPs)
chr6 (113-244)||(5627389-5627520)
chr6 (113-228)||(1945831-1945947)
chr6 (113-227)||(4318895-4319009)
chr6 (114-228)||(7055286-7055400)
chr6 (114-230)||(8513232-8513348)
chr6 (111-230)||(21017181-21017300)
chr6 (114-227)||(3880011-3880124)
chr6 (113-240)||(18498431-18498559)
chr6 (118-229)||(6091253-6091363)
chr6 (115-230)||(33893071-33893186)
chr6 (141-228)||(15491641-15491728)
chr6 (115-244)||(7235090-7235218)
chr6 (117-179)||(30353478-30353540)
chr6 (110-163)||(19631744-19631797)
chr6 (117-230)||(29182165-29182278)
chr6 (117-240)||(6088910-6089033)
chr6 (111-163)||(26301923-26301975)
chr6 (116-191)||(20768087-20768162)
[»] chr4 (53 HSPs)
chr4 (111-228)||(34361589-34361706)
chr4 (111-207)||(4396322-4396418)
chr4 (113-240)||(3042609-3042736)
chr4 (105-228)||(32912678-32912801)
chr4 (114-240)||(37663827-37663951)
chr4 (113-227)||(50697240-50697354)
chr4 (115-240)||(19089539-19089664)
chr4 (113-240)||(25701143-25701270)
chr4 (114-240)||(25184112-25184238)
chr4 (113-210)||(35021151-35021248)
chr4 (115-230)||(19440744-19440860)
chr4 (113-227)||(9139245-9139357)
chr4 (113-240)||(55477977-55478108)
chr4 (117-225)||(27396618-27396726)
chr4 (115-230)||(39397918-39398033)
chr4 (117-227)||(17167715-17167825)
chr4 (117-227)||(17173292-17173402)
chr4 (114-228)||(42199728-42199842)
chr4 (117-230)||(36493784-36493897)
chr4 (113-240)||(29584286-29584411)
chr4 (115-185)||(46884175-46884245)
chr4 (115-200)||(53124287-53124372)
chr4 (113-197)||(7152235-7152319)
chr4 (141-240)||(54499324-54499424)
chr4 (114-225)||(879649-879760)
chr4 (113-220)||(4205114-4205221)
chr4 (116-226)||(37775670-37775780)
chr4 (115-240)||(49375966-49376092)
chr4 (115-240)||(28003072-28003197)
chr4 (113-230)||(30002720-30002837)
chr4 (141-240)||(6864061-6864160)
chr4 (115-230)||(7703517-7703632)
chr4 (117-240)||(47253751-47253873)
chr4 (116-230)||(4597994-4598107)
chr4 (114-227)||(37287732-37287846)
chr4 (117-230)||(34948193-34948306)
chr4 (113-230)||(38011852-38011969)
chr4 (114-230)||(35025684-35025800)
chr4 (116-164)||(51204580-51204628)
chr4 (115-230)||(55241200-55241315)
chr4 (113-179)||(17272009-17272075)
chr4 (140-230)||(46888253-46888343)
chr4 (113-162)||(42063001-42063050)
chr4 (118-162)||(47028103-47028147)
chr4 (113-164)||(47073656-47073707)
chr4 (113-163)||(2704510-2704560)
chr4 (141-199)||(32579470-32579528)
chr4 (113-163)||(38812260-38812310)
chr4 (157-230)||(23761114-23761187)
chr4 (117-229)||(5048062-5048174)
chr4 (118-230)||(32592096-32592208)
chr4 (145-240)||(50764762-50764855)
chr4 (117-173)||(52516599-52516655)
[»] chr2 (38 HSPs)
chr2 (115-240)||(37905709-37905833)
chr2 (115-228)||(35958909-35959022)
chr2 (114-228)||(11366471-11366585)
chr2 (115-240)||(33551064-33551189)
chr2 (114-226)||(17071829-17071941)
chr2 (148-240)||(43648323-43648415)
chr2 (113-230)||(4166920-4167037)
chr2 (113-225)||(19289416-19289523)
chr2 (113-240)||(29242216-29242343)
chr2 (116-230)||(13711465-13711579)
chr2 (114-224)||(17054190-17054300)
chr2 (115-229)||(26357577-26357691)
chr2 (113-240)||(2325448-2325575)
chr2 (115-230)||(19313852-19313967)
chr2 (114-244)||(4264151-4264281)
chr2 (115-230)||(33902068-33902181)
chr2 (115-240)||(4478368-4478494)
chr2 (113-179)||(41960881-41960947)
chr2 (114-230)||(27350026-27350143)
chr2 (117-230)||(33660456-33660569)
chr2 (117-230)||(43770927-43771039)
chr2 (108-200)||(18494386-18494478)
chr2 (117-240)||(3176941-3177064)
chr2 (112-230)||(31570822-31570940)
chr2 (115-229)||(4763628-4763745)
chr2 (117-240)||(36641988-36642111)
chr2 (114-230)||(5881533-5881654)
chr2 (114-199)||(19424747-19424832)
chr2 (112-240)||(39167441-39167569)
chr2 (117-240)||(41463928-41464051)
chr2 (113-163)||(34441921-34441971)
chr2 (115-197)||(41465509-41465591)
chr2 (147-230)||(33709320-33709403)
chr2 (116-163)||(42005390-42005437)
chr2 (115-169)||(31861895-31861949)
chr2 (117-163)||(41643874-41643920)
chr2 (115-163)||(18514771-18514819)
chr2 (114-162)||(43446463-43446511)
[»] chr8 (36 HSPs)
chr8 (114-240)||(1150171-1150297)
chr8 (115-240)||(10555268-10555393)
chr8 (114-228)||(8803888-8803998)
chr8 (115-240)||(23854497-23854622)
chr8 (121-228)||(37970597-37970704)
chr8 (114-228)||(30654661-30654775)
chr8 (113-240)||(1204924-1205051)
chr8 (113-240)||(43643661-43643788)
chr8 (113-230)||(9864145-9864262)
chr8 (113-230)||(36695042-36695159)
chr8 (116-240)||(31933952-31934076)
chr8 (115-230)||(6098594-6098709)
chr8 (113-230)||(40862416-40862534)
chr8 (115-240)||(12876108-12876233)
chr8 (115-244)||(13307622-13307751)
chr8 (111-240)||(16222858-16222987)
chr8 (114-230)||(16446951-16447067)
chr8 (114-230)||(34952107-34952223)
chr8 (113-232)||(34894964-34895083)
chr8 (115-228)||(41362517-41362627)
chr8 (107-230)||(38643969-38644092)
chr8 (114-240)||(27082904-27083030)
chr8 (117-230)||(465843-465956)
chr8 (115-180)||(15009241-15009306)
chr8 (141-230)||(11727049-11727138)
chr8 (115-240)||(5300012-5300137)
chr8 (176-240)||(1149698-1149762)
chr8 (117-181)||(7891073-7891137)
chr8 (141-200)||(24823378-24823437)
chr8 (113-163)||(4108912-4108962)
chr8 (121-163)||(23176763-23176805)
chr8 (117-163)||(35735984-35736030)
chr8 (115-239)||(4133077-4133199)
chr8 (116-181)||(35459823-35459888)
chr8 (111-164)||(41191018-41191070)
chr8 (115-179)||(44869495-44869559)
[»] chr5 (51 HSPs)
chr5 (113-229)||(22255179-22255296)
chr5 (114-240)||(17158081-17158209)
chr5 (116-230)||(31705671-31705785)
chr5 (1-114)||(27172525-27172636)
chr5 (110-230)||(5112373-5112493)
chr5 (115-240)||(5829897-5830026)
chr5 (117-230)||(7208923-7209037)
chr5 (108-227)||(22974145-22974264)
chr5 (115-230)||(40133385-40133500)
chr5 (113-240)||(24886100-24886229)
chr5 (113-230)||(36860421-36860538)
chr5 (111-240)||(35826533-35826662)
chr5 (113-240)||(30969374-30969501)
chr5 (107-230)||(38528296-38528419)
chr5 (113-210)||(12910348-12910445)
chr5 (147-240)||(14919578-14919671)
chr5 (115-200)||(26317774-26317859)
chr5 (114-230)||(1429205-1429321)
chr5 (115-227)||(7693230-7693342)
chr5 (114-230)||(9200232-9200348)
chr5 (141-232)||(699176-699267)
chr5 (115-230)||(36866762-36866877)
chr5 (115-229)||(23116283-23116397)
chr5 (113-230)||(19119857-19119974)
chr5 (128-225)||(27318552-27318649)
chr5 (115-232)||(35511535-35511652)
chr5 (113-240)||(27330304-27330429)
chr5 (115-230)||(15724490-15724604)
chr5 (113-230)||(8741946-8742064)
chr5 (116-230)||(32563150-32563264)
chr5 (114-229)||(39572818-39572933)
chr5 (116-185)||(35504168-35504240)
chr5 (113-210)||(13956425-13956522)
chr5 (115-200)||(14409416-14409501)
chr5 (148-205)||(22255608-22255665)
chr5 (117-230)||(26268076-26268189)
chr5 (115-240)||(31786696-31786821)
chr5 (147-240)||(43308702-43308794)
chr5 (177-240)||(35504427-35504490)
chr5 (141-230)||(5837581-5837670)
chr5 (115-230)||(21088826-21088941)
chr5 (117-240)||(25500976-25501099)
chr5 (115-192)||(16004474-16004552)
chr5 (113-163)||(22616492-22616542)
chr5 (141-230)||(22980819-22980908)
chr5 (114-230)||(8436965-8437081)
chr5 (128-240)||(11898015-11898127)
chr5 (116-163)||(21320752-21320799)
chr5 (75-109)||(27163550-27163584)
chr5 (113-198)||(8466743-8466828)
chr5 (129-165)||(5748442-5748478)
[»] scaffold0291 (1 HSPs)
scaffold0291 (117-240)||(7889-8012)
[»] scaffold0022 (1 HSPs)
scaffold0022 (117-228)||(146088-146199)
[»] scaffold0002 (4 HSPs)
scaffold0002 (114-240)||(133-259)
scaffold0002 (140-225)||(94458-94543)
scaffold0002 (113-165)||(408704-408756)
scaffold0002 (169-230)||(408498-408559)
[»] scaffold0061 (1 HSPs)
scaffold0061 (117-240)||(43959-44082)
[»] scaffold0017 (1 HSPs)
scaffold0017 (117-240)||(154705-154828)
[»] scaffold0009 (2 HSPs)
scaffold0009 (114-206)||(42347-42439)
scaffold0009 (113-180)||(100819-100886)
[»] scaffold0318 (1 HSPs)
scaffold0318 (117-198)||(11908-11990)
[»] scaffold0662 (1 HSPs)
scaffold0662 (118-162)||(6982-7026)


Alignment Details
Target: chr7 (Bit Score: 102; Significance: 1e-50; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 37109847 - 37109968
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |    
T  37109847 ggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatga 37109946  T
Q  215 catcaaaagttcagtcattata 236  Q
    ||||||||||||||||||||||    
T  37109947 catcaaaagttcagtcattata 37109968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 113 - 236
Target Start/End: Complemental strand, 17842774 - 17842651
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  17842774 aaggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaat 17842675  T
Q  213 tacatcaaaagttcagtcattata 236  Q
     |||||||||| ||||||||||||    
T  17842674 gacatcaaaagctcagtcattata 17842651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 115 - 244
Target Start/End: Original strand, 27283719 - 27283848
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||| ||| |||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| |    
T  27283719 ggaaaattctatggtgaagttataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccaccgtttgtacaatga 27283818  T
Q  215 catcaaaagttcagtcattatagtattatc 244  Q
     ||||||||||||||| | |||||||||||    
T  27283819 aatcaaaagttcagtcctcatagtattatc 27283848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 116 - 240
Target Start/End: Original strand, 38258521 - 38258645
Alignment:
Q  116 gaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattac 215  Q
    ||||||||||  ||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||| ||    
T  38258521 gaaaattctacggtgaagtcataaaaatgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccacaccgtttgtacaatgac 38258620  T
Q  216 atcaaaagttcagtcattatagtat 240  Q
    |||||||||||| || | |||||||    
T  38258621 atcaaaagttcaatcctcatagtat 38258645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 113 - 240
Target Start/End: Original strand, 18797302 - 18797427
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| ||||||||||   ||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||  ||||||||||    
T  18797302 aaggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacacta--acataaaaaatgtaatgagtaacaccccactgtttgtacaat 18797399  T
Q  213 tacatcaaaagttcagtcattatagtat 240  Q
     |||||||||||||| || | |||||||    
T  18797400 gacatcaaaagttcaatcctcatagtat 18797427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 113 - 230
Target Start/End: Complemental strand, 32821241 - 32821124
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| ||||||||||  |||||| ||||||||||||||||||| |||||||| ||||||||| |||||||||| ||||  ||||||||||    
T  32821241 aaggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttaacaatataacatcaaaaatgtagtgagtaacacaccactgtttgtacaat 32821142  T
Q  213 tacatcaaaagttcagtc 230  Q
      ||||||||||||||||    
T  32821141 ggcatcaaaagttcagtc 32821124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 113 - 240
Target Start/End: Original strand, 30055499 - 30055627
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttgg-tgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaa 211  Q
    |||||||||||||| |||||||||||  |||||||||||| | ||||||||||| ||||| || |||| ||||||||||||||||||||  |||||||||    
T  30055499 aaggaaaattctatggtgaagtcataagaatgactttttttgatgaagttaacactataatatcaaaattgtaatgagtaacaccccactgtttgtacaa 30055598  T
Q  212 ttacatcaaaagttcagtcattatagtat 240  Q
    | ||||||||||||||||| | |||||||    
T  30055599 tgacatcaaaagttcagtcctcatagtat 30055627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 7334769 - 7334883
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||  |||||||| |   ||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||  |||||||||| |    
T  7334769 ggaaaattctacggtgaagtcgtgagaatgacttttttgatgaagttaacactataacataaaatatgtaatgagtaacaccccactgtttgtacaatga 7334868  T
Q  215 catcaaaagttcagt 229  Q
    |||||||||||||||    
T  7334869 catcaaaagttcagt 7334883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 24211717 - 24211829
Alignment:
Q  116 gaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattac 215  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||  ||| || |||  |    
T  24211717 gaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccctactgtttatagaatggc 24211816  T
Q  216 atcaaaagttcag 228  Q
    |||||||||||||    
T  24211817 atcaaaagttcag 24211829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 114 - 240
Target Start/End: Complemental strand, 31579256 - 31579125
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccac-----catttgta 208  Q
    ||||||||||||| |||||||||||  ||| | ||||||||||||||||||| |||||||| |||||||||||||||||||||||||      |||| ||    
T  31579256 aggaaaattctatggtgaagtcataagaataatttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttaatttata 31579157  T
Q  209 caattacatcaaaagttcagtcattatagtat 240  Q
    |||| ||||||||||||||||| | |||||||    
T  31579156 caatgacatcaaaagttcagtcttcatagtat 31579125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 115 - 230
Target Start/End: Original strand, 4582894 - 4583009
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| |||||||||   ||||||||||| |||||||||||| | ||||  || ||||||||  ||||||||||||||| ||||||||||| |    
T  4582894 ggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaatactatagtatcaaaaatgttgtgagtaacaccccactatttgtacaatga 4582993  T
Q  215 catcaaaagttcagtc 230  Q
    ||||||||||||||||    
T  4582994 catcaaaagttcagtc 4583009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 115 - 240
Target Start/End: Original strand, 37346997 - 37347122
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||| ||| ||||||||||  |||||| ||||||||||||||||| | |||| ||| |||||| |||||||||||||||||   |||||||| | |    
T  37346997 ggaaaattttatggtgaagtcatgaaaatgatttttttggtgaagttaatactataccatcaaaaatataatgagtaacaccccattgtttgtacagtga 37347096  T
Q  215 catcaaaagttcagtcattatagtat 240  Q
    |||||||||||||||| | |||||||    
T  37347097 catcaaaagttcagtcctcatagtat 37347122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 38053493 - 38053575
Alignment:
Q  147 ttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagt 229  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| |||| ||  |||||||||| ||||||||||||||||    
T  38053493 ttttttggtgaagttaatactataacataaaaaatgtaatgagtaaaaccctactgtttgtacaatgacatcaaaagttcagt 38053575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 240
Target Start/End: Original strand, 43686015 - 43686140
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| |||||||||   |||||||||||| ||||||||||||| ||||| || ||||||||  ||||||||| |||||  ||||||||||     
T  43686015 aggaaaattctatggtgaagtcacgaaaatgactttttgggtgaagttaacactataatatcaaaaatgttgtgagtaaca-cccactgtttgtacaatg 43686113  T
Q  214 acatcaaaagttcagtcattatagtat 240  Q
     ||||||||||||||||  ||||||||    
T  43686114 gcatcaaaagttcagtccctatagtat 43686140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 115 - 240
Target Start/End: Complemental strand, 5657667 - 5657542
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||||||   |||||||||| | |||||||||||| |||||||| |||| |||  |||||||||||||||  |||||||| |      
T  5657667 ggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtgg 5657568  T
Q  215 catcaaaagttcagtcattatagtat 240  Q
    |||||||||||||||| | |||||||    
T  5657567 catcaaaagttcagtcttcatagtat 5657542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 113 - 225
Target Start/End: Complemental strand, 12390818 - 12390706
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaat-gacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaa 211  Q
    |||||||||||||| |||||||||| || || |||||||||||||||||||||| |||||||| |||| |||||||||||||| |||||  ||||| ||     
T  12390818 aaggaaaattctatggtgaagtcat-cagatcgacttttttggtgaagttaacactataacatcaaaagtgtaatgagtaacatcccactgtttgtgcag 12390720  T
Q  212 ttacatcaaaagtt 225  Q
    | ||||||||||||    
T  12390719 tgacatcaaaagtt 12390706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 117 - 230
Target Start/End: Complemental strand, 27421563 - 27421450
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||||||| |||||||| |   ||||| ||||||||||||||||||| |||||||| |||| |||  |||||||||| ||||  |||||||||| |||    
T  27421563 aaaattctatggtgaagtcgtgataatgatttttttggtgaagttaacactataacatcaaaagtgttgtgagtaacactccactgtttgtacaatgaca 27421464  T
Q  217 tcaaaagttcagtc 230  Q
    ||||||||||||||    
T  27421463 tcaaaagttcagtc 27421450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 10481619 - 10481705
Alignment:
Q  155 tgaagttaacattataacataaaaaatgtaatgagtaaca-ccccaccatttgtacaattacatcaaaagttcagtcattatagtat 240  Q
    ||||||||||| ||||||||||||||| |||||||||||| ||||||  |||||||||| ||||||||| ||||||| |||||||||    
T  10481619 tgaagttaacactataacataaaaaatataatgagtaacacccccactgtttgtacaatgacatcaaaaattcagtctttatagtat 10481705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 227
Target Start/End: Original strand, 23111167 - 23111277
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||||| | ||||||||||  |||||| |||| |||||||||||||| |||||||| |||||| |  |||||||||| |||| |||||||||||  ||    
T  23111167 aaaattctgtggtgaagtcatgaaaatgatttttctggtgaagttaacactataacatcaaaaatattgtgagtaacacaccactatttgtacaatggca 23111266  T
Q  217 tcaaaagttca 227  Q
    |||||||||||    
T  23111267 tcaaaagttca 23111277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 9356022 - 9355902
Alignment:
Q  105 ataattacaaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatt 204  Q
    |||| ||||||||||||| ||| ||||||||||   ||||||  |||||||||| |||||| |||| ||||||||||||| |||| || |||||||  ||    
T  9356022 ataaatacaaggaaaattttatggtgaagtcatgagaatgaccattttggtgaatttaacactatagcataaaaaatgtagtgagcaataccccactgtt 9355923  T
Q  205 tgtacaattacatcaaaagtt 225  Q
    |||||| | ||||||||||||    
T  9355922 tgtacagtgacatcaaaagtt 9355902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 230
Target Start/End: Complemental strand, 31520909 - 31520794
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||| |||  |||||||||  |||||||||||||||||||||||| | |||| ||| |||||| || |||||||||| |||   |||||||| | |    
T  31520909 ggaaaattttatgatgaagtcatgaaaatgacttttttggtgaagttaatactataccatcaaaaatatagtgagtaacactccattgtttgtacagtga 31520810  T
Q  215 catcaaaagttcagtc 230  Q
    ||||||||||||||||    
T  31520809 catcaaaagttcagtc 31520794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 115 - 225
Target Start/End: Original strand, 6546494 - 6546604
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| |||||||||||  ||||| |||| | |||||||||||| |||| ||| |||| |||   |||||||||||||| ||||||||| | |    
T  6546494 ggaaaattctatggtgaagtcataagaatgatttttctagtgaagttaacactatagcatcaaaagtgttgcgagtaacaccccactatttgtacagtaa 6546593  T
Q  215 catcaaaagtt 225  Q
    |||||||||||    
T  6546594 catcaaaagtt 6546604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 116 - 230
Target Start/End: Complemental strand, 48928748 - 48928634
Alignment:
Q  116 gaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattac 215  Q
    ||||||| ||| ||||||||||   |||||||||| ||||||||| |||| |||||||| |||| |||| |||||| |||||||| ||||||||  |  |    
T  48928748 gaaaattttatggtgaagtcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactatttgtacggtgcc 48928649  T
Q  216 atcaaaagttcagtc 230  Q
    |||||||||||||||    
T  48928648 atcaaaagttcagtc 48928634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 230
Target Start/End: Original strand, 26980325 - 26980413
Alignment:
Q  142 atgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtc 230  Q
    ||||||||| ||||||||||||||||||| ||| |||| |||  |||||||||||||||  |||||||| |  ||||||||||||||||    
T  26980325 atgacttttatggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccccacggtttgtacagtggcatcaaaagttcagtc 26980413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 29173518 - 29173640
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||||||| ||||||||| |  |||||||||| |||||||||||||| | ||  || |||| |||  |||||||||| ||||  |||||||||| |||    
T  29173518 aaaattctat-gtgaagtcacatgaatgacttttctggtgaagttaacactgtagtatcaaaagtgttgtgagtaacactccactgtttgtacaatgaca 29173616  T
Q  217 tcaaaagttcagtcattatagtat 240  Q
    |||||||||||||| | |||||||    
T  29173617 tcaaaagttcagtcctcatagtat 29173640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 141 - 230
Target Start/End: Complemental strand, 48928456 - 48928367
Alignment:
Q  141 aatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtc 230  Q
    |||||||||| ||||||||| |||| |||||||| |||| |||| |||||| |||||||| ||||||||  |  ||||||||||||||||    
T  48928456 aatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactatttgtacggtgccatcaaaagttcagtc 48928367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 230
Target Start/End: Original strand, 21991610 - 21991726
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||  ||||||||||   ||||| |||| |||||||||||||| |||| ||| |||| |||   ||||||||||||||  |||||||| |     
T  21991610 aggaaaattctagggtgaagtcatgagaatgatttttatggtgaagttaacactatagcatcaaaattgttgcgagtaacaccccactgtttgtacagtg 21991709  T
Q  214 acatcaaaagttcagtc 230  Q
     ||||||||||||||||    
T  21991710 tcatcaaaagttcagtc 21991726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 230
Target Start/End: Original strand, 32432431 - 32432542
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| |||||||||   |||||| |||| |||||||||||||| ||| |     |||||||  ||||||||||||||   ||||||||||     
T  32432431 aggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactatca-----aaaatgttgtgagtaacaccccattgtttgtacaatg 32432525  T
Q  214 acatcaaaagttcagtc 230  Q
    |||||||||||||||||    
T  32432526 acatcaaaagttcagtc 32432542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 230
Target Start/End: Original strand, 8861260 - 8861375
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||||||   |||||||||| | | |||||||||| |||| ||| |||| ||| |||| |||||||||||  |||||||| |      
T  8861260 ggaaaattctatggtgaagtcatgagaatgacttttctcgcgaagttaacactatagcatcaaaagtgttatgaataacaccccactgtttgtacagtgg 8861359  T
Q  215 catcaaaagttcagtc 230  Q
    ||||||||||| ||||    
T  8861360 catcaaaagttaagtc 8861375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 230
Target Start/End: Complemental strand, 10359400 - 10359285
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||||||   |||||||||| |||| || ||||  ||||| ||| |||| |||| ||||||||| || || |||| |||| | |    
T  10359400 ggaaaattctatggtgaagtcatgataatgacttttctggtaaaattaatcttatagcatcaaaagtgtagtgagtaacatcctactatttatacagtga 10359301  T
Q  215 catcaaaagttcagtc 230  Q
    ||||||||||||||||    
T  10359300 catcaaaagttcagtc 10359285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 230
Target Start/End: Original strand, 12165727 - 12165842
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||  |||||||| |  ||||||||||| |||||||||||||| |||| |||  ||| |||  |||||||||||||||  |||||||| |      
T  12165727 ggaaaattctacggtgaagtcgttaaaatgacttttctggtgaagttaacactatagcatccaaagtgttgtgagtaacaccccactgtttgtacagtgg 12165826  T
Q  215 catcaaaagttcagtc 230  Q
    ||||||||||| ||||    
T  12165827 catcaaaagttaagtc 12165842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 240
Target Start/End: Complemental strand, 26524515 - 26524388
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| ||||||||||   |||||||||| |||||| ||||||| |||||||| ||||||||  ||| |||||| |||   ||||| || |    
T  26524515 aaggaaaattctatggtgaagtcatgagaatgacttttctggtgatgttaacactataacatcaaaaatgttgtgactaacactccattgtttgtgcagt 26524416  T
Q  213 tacatcaaaagttcagtcattatagtat 240  Q
      |||||||||| ||||| | |||||||    
T  26524415 ggcatcaaaagtccagtcctcatagtat 26524388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 44413564 - 44413454
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttgg-tgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattac 215  Q
    |||||||||| || |||||||  |||||||||||||   ||||||||||| |||||||| |||||| || ||||||||||||||   |||||||| | |     
T  44413564 aaaattctatggtaaagtcatgaaaatgactttttttaatgaagttaacactataacatcaaaaatatagtgagtaacaccccaatgtttgtacactgaa 44413465  T
Q  216 atcaaaagttc 226  Q
    |||||||||||    
T  44413464 atcaaaagttc 44413454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 230
Target Start/End: Original strand, 22687215 - 22687329
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    ||||||||||||||   ||||||||   |||||||||| || ||||||||||| |||||||| ||||||||  |||||||||| ||||  ||||| || |    
T  22687215 aaggaaaattctat---gaagtcatgagaatgacttttctgatgaagttaacactataacatcaaaaatgttgtgagtaacactccactgtttgtgcagt 22687311  T
Q  213 tacatcaaaagttcagtc 230  Q
       |||||||||||||||    
T  22687312 ggtatcaaaagttcagtc 22687329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 241070 - 241024
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagt 160  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||||    
T  241070 aggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagt 241024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 43925113 - 43925192
Alignment:
Q  147 ttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtc 230  Q
    |||||| |||||||||||||| ||  |||||||||||  ||||||||||| |||    |||||||| |||||||||||||||||    
T  43925113 ttttttagtgaagttaacattgtagtataaaaaatgttgtgagtaacacctcac----tgtacaatgacatcaaaagttcagtc 43925192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 11071182 - 11071295
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatg-acttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattac 215  Q
    |||||||||| ||||||||||  ||||| | ||||||||| ||||||  | |||| ||| |||||| ||  ||||||||| ||||  |||||||| | ||    
T  11071182 aaaattctatggtgaagtcatgaaaatgtatttttttggtaaagttagtactatatcatcaaaaatatagcgagtaacactccactgtttgtacagtgac 11071281  T
Q  216 atcaaaagttcagt 229  Q
    ||||||||||||||    
T  11071282 atcaaaagttcagt 11071295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 240
Target Start/End: Complemental strand, 33688446 - 33688323
Alignment:
Q  116 gaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattac 215  Q
    ||||||| ||| ||||||| ||   |||||||||| |||| ||||||||| |||||||| |||| ||| |||||||||| || ||  ||||| || |  |    
T  33688446 gaaaattatatggtgaagttatgagaatgacttttctggt-aagttaacactataacatcaaaagtgttatgagtaacatcctactgtttgtccagtggc 33688348  T
Q  216 atcaaaagttcagtcattatagtat 240  Q
    |||||||||||||||  ||||||||    
T  33688347 atcaaaagttcagtctctatagtat 33688323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 34095932 - 34095888
Alignment:
Q  118 aaattctatagtgaagtcatacaaatgacttttttggtgaagtta 162  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||    
T  34095932 aaattctatggtgaagtcattcaattgacttttttggtgaagtta 34095888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 230
Target Start/End: Complemental strand, 15612944 - 15612830
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||||||   ||| || ||| | |||||||||||| ||||||||  ||| ||| |||||||||||||||   |||||| | |      
T  15612944 ggaaaattctatggtgaagtcatgagaataacgtttcttgtgaagttaacactataacat-caaagtgttatgagtaacaccccagtgtttgtagagtgg 15612846  T
Q  215 catcaaaagttcagtc 230  Q
    ||||||||||||||||    
T  15612845 catcaaaagttcagtc 15612830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 8299192 - 8299245
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattata 170  Q
    |||||||||| |||||||||   ||||||||||| |||||||||||||| ||||    
T  8299192 aaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacactata 8299245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 199
Target Start/End: Original strand, 37704143 - 37704227
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaa-tgtaatgagtaacacccca 199  Q
    ||||||||||||  |||| | ||| |||||| ||||||  ||||||||||| |||| ||||||||| |||| ||||||||||||||    
T  37704143 ggaaaattctatgatgaaattataaaaatgattttttta-tgaagttaacactatagcataaaaaaatgtagtgagtaacacccca 37704227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 8133609 - 8133561
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaa 163  Q
    |||||||||||  |||||||||||  ||| |||||||||||||||||||    
T  8133609 ggaaaattctactgtgaagtcataagaataacttttttggtgaagttaa 8133561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 1e-41; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 114 - 240
Target Start/End: Complemental strand, 3655388 - 3655262
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||| ||| ||||||||||| |||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||     
T  3655388 aggaaaattttatggtgaagtcataaaaatgacttttttgataaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatg 3655289  T
Q  214 acatcaaaagttcagtcattatagtat 240  Q
    ||||||||||||||||| | |||||||    
T  3655288 acatcaaaagttcagtcctcatagtat 3655262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 114 - 230
Target Start/End: Complemental strand, 40552445 - 40552329
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| ||||||||||   |||||||||||||| |||||||||| |||||||| |||||||||||||||||||| ||||| ||||||||||     
T  40552445 aggaaaattctatggtgaagtcatgagaatgacttttttggagaagttaacactataacatcaaaaatgtaatgagtaacactccaccgtttgtacaatg 40552346  T
Q  214 acatcaaaagttcagtc 230  Q
    |||||||||||||||||    
T  40552345 acatcaaaagttcagtc 40552329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 20373481 - 20373367
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||| |||||||||||||||  ||||| ||||||||||||||||| | |||||||| |||||||||| ||||||||||||||  |||||||||| |    
T  20373481 ggaaaattttatagtgaagtcataagaatgatttttttggtgaagttaatactataacatcaaaaatgtaacgagtaacaccccactgtttgtacaatga 20373382  T
Q  215 catcaaaagttcagt 229  Q
    |||||||||||||||    
T  20373381 catcaaaagttcagt 20373367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 115 - 240
Target Start/End: Complemental strand, 51213166 - 51213041
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||||||   ||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||  ||||||||||      
T  51213166 ggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactgtaacataaaaaatgtaatgagcaacaccccactgtttgtacaatgg 51213067  T
Q  215 catcaaaagttcagtcattatagtat 240  Q
    ||||||||||| |||| | |||||||    
T  51213066 catcaaaagttgagtcctcatagtat 51213041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 115 - 240
Target Start/End: Original strand, 37203058 - 37203183
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||||||| |||||| ||||||| ||||||||||| |||||||| |||| |||| |||||||||||||||  |||||||| |      
T  37203058 ggaaaattctatggtgaagtcataaaaatgatttttttgatgaagttaacactataacatcaaaattgtagtgagtaacaccccactgtttgtacagtgg 37203157  T
Q  215 catcaaaagttcagtcattatagtat 240  Q
    |||||||||||||||| | |||||||    
T  37203158 catcaaaagttcagtcctcatagtat 37203183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 114 - 230
Target Start/End: Complemental strand, 26941446 - 26941330
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| |||||||||||  ||||| ||||||||||||||||||| ||||| || |||| | ||||||||||||||||||  |||||| |||     
T  26941446 aggaaaattctatggtgaagtcataagaatgatttttttggtgaagttaacactataaaatcaaaattataatgagtaacaccccactgtttgtataatg 26941347  T
Q  214 acatcaaaagttcagtc 230  Q
    |||||||||||||||||    
T  26941346 acatcaaaagttcagtc 26941330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 113 - 225
Target Start/End: Original strand, 47481511 - 47481623
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||| ||| |||||||||||  |||||  |||||||||||||||||| |||||||| |||||||||||||||||||||||||  |||||| |||    
T  47481511 aaggaaaattttatggtgaagtcataggaatgatgtttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtagaat 47481610  T
Q  213 tacatcaaaagtt 225  Q
     ||||||||||||    
T  47481611 gacatcaaaagtt 47481623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 48354928 - 48355046
Alignment:
Q  111 acaaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtaca 210  Q
    |||||||||||||||| ||||||||||   ||||| |||| |||||||||||||| ||||| || ||||||||||||||||||||||||   ||||||||    
T  48354928 acaaggaaaattctatggtgaagtcatgagaatgatttttatggtgaagttaacactataatattaaaaatgtaatgagtaacaccccattgtttgtaca 48355027  T
Q  211 attacatcaaaagttcagt 229  Q
    ||  |||||||||||||||    
T  48355028 atggcatcaaaagttcagt 48355046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 113 - 230
Target Start/End: Original strand, 34132924 - 34133041
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    ||||||||||||||| ||||||||   ||||||||||||||||||| |||||| ||||  || ||||||||  |||||||||||||||  ||||||||||    
T  34132924 aaggaaaattctataatgaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacaccccactgtttgtacaat 34133023  T
Q  213 tacatcaaaagttcagtc 230  Q
     |||||||||||||||||    
T  34133024 gacatcaaaagttcagtc 34133041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 115 - 240
Target Start/End: Original strand, 37157699 - 37157823
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||||||  ||||| |||||||| ||||||||||| |||||||| |||| |||| |||||||||||||| |  ||||||| |      
T  37157699 ggaaaattctatggtgaagtcatgaaaatggcttttttgatgaagttaacactataacatcaaaattgtagtgagtaacacccca-ctgttgtacagtgg 37157797  T
Q  215 catcaaaagttcagtcattatagtat 240  Q
    |||||||||||||||||| |||||||    
T  37157798 catcaaaagttcagtcatcatagtat 37157823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 230
Target Start/End: Complemental strand, 46297945 - 46297832
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||||||| ||||||||||  ||||||||||| |||||||||||||| |||||||| |||||| || |||||||||| ||||  ||||||||||  |     
T  46297945 aaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacactataacatcaaaaatatagtgagtaacacaccactgtttgtacaatggcg 46297846  T
Q  217 tcaaaagttcagtc 230  Q
    ||||||||||||||    
T  46297845 tcaaaagttcagtc 46297832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 29099359 - 29099461
Alignment:
Q  128 gtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttca 227  Q
    ||||||||||   |||||||||| |||||||||||||| |||||||||||||||||  |||||||||||||||  |||||||| | ||||| ||||||||    
T  29099359 gtgaagtcattagaatgacttttctggtgaagttaacactataacataaaaaatgtcgtgagtaacaccccactgtttgtacagtgacatctaaagttca 29099458  T
Q  228 gtc 230  Q
    |||    
T  29099459 gtc 29099461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 113 - 230
Target Start/End: Original strand, 35844315 - 35844432
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| ||||||||||   |||||||||| |||||||||||||| |||||||  ||||||||  ||||||||||| |||  |||||||| |    
T  35844315 aaggaaaattctatggtgaagtcatgataatgacttttctggtgaagttaacactataacaacaaaaatgttgtgagtaacacctcactgtttgtacagt 35844414  T
Q  213 tacatcaaaagttcagtc 230  Q
     |||||||||||| ||||    
T  35844415 gacatcaaaagtttagtc 35844432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 240
Target Start/End: Complemental strand, 4761840 - 4761709
Alignment:
Q  111 acaaggaaaattctatagtgaagtcatacaaatgac--ttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgta 208  Q
    |||||||||||||||| ||||| ||||   | ||||  ||||||||||||||||| | ||||| || ||||||||||||||||||||  |||  ||||||    
T  4761840 acaaggaaaattctatggtgaattcatgagattgacttttttttggtgaagttaatactataatatcaaaaatgtaatgagtaacacttcactgtttgta 4761741  T
Q  209 caattacatcaaaagttcagtcattatagtat 240  Q
    |||| ||||||||||||||||| | |||||||    
T  4761740 caatgacatcaaaagttcagtcctcatagtat 4761709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 54505825 - 54505912
Alignment:
Q  141 aatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcag 228  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||  |||| || ||| ||||||||| |||||    
T  54505825 aatgacttttttgttgaagttaacactataacatcaaaaatgtaatgagtaacaccccattatttatagaatgacatcaaaaattcag 54505912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 227
Target Start/End: Complemental strand, 54828883 - 54828774
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||| ||| ||||||||||| |||| | ||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||| |||  ||||  |||    
T  54828883 aaaattttatggtgaagtcataaaaataatttttttggtaaagttaacactataacata-aaaatgtaatgagtaacaccccaccgtttaaacaacgaca 54828785  T
Q  217 tcaaaagttca 227  Q
    |||||| ||||    
T  54828784 tcaaaaattca 54828774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 21009955 - 21009874
Alignment:
Q  147 ttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcag 228  Q
    |||||| ||||| || ||| |||||||| ||||||||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  21009955 tttttttgtgaatttgacactataacatcaaaaatgtaatgagtaacaccccactatttgtagaatgacatcaaaagttcag 21009874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 118 - 227
Target Start/End: Complemental strand, 22446247 - 22446138
Alignment:
Q  118 aaattctatagtgaagtcatacaaatgactttttt-ggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    ||||||||  ||||||||||  ||||||||||||| |||||||||||||||||| ||| |||||| || |||||||||||||| | |||||||| |  ||    
T  22446247 aaattctacggtgaagtcatgaaaatgactttttttggtgaagttaacattatatcatcaaaaatatagtgagtaacacccca-cttttgtacagtggca 22446149  T
Q  217 tcaaaagttca 227  Q
    |||||||||||    
T  22446148 tcaaaagttca 22446138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 240
Target Start/End: Original strand, 4015451 - 4015576
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||||||   |||||||||| || ||||||||||| |||| ||| |||| |||  |||||||||||| ||  |||||| | | |    
T  4015451 ggaaaattctatggtgaagtcatgagaatgacttttctgatgaagttaacactatagcatcaaaagtgttgtgagtaacacccaactgtttgtagagtga 4015550  T
Q  215 catcaaaagttcagtcattatagtat 240  Q
    |||||||||||||||| | |||||||    
T  4015551 catcaaaagttcagtcctcatagtat 4015576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 114 - 230
Target Start/End: Complemental strand, 7327669 - 7327552
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaa-cattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    ||||||||||||| ||||||| ||   |||||||||||| |||||||||| || |||||||| |||| |||  |||||||||| |||  ||||||||| |    
T  7327669 aggaaaattctatggtgaagttatgagaatgacttttttagtgaagttaaacactataacatcaaaagtgttgtgagtaacactccattatttgtacagt 7327570  T
Q  213 tacatcaaaagttcagtc 230  Q
     |||||||||||||||||    
T  7327569 gacatcaaaagttcagtc 7327552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 11357524 - 11357424
Alignment:
Q  141 aatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaaca-ccccaccatttgtacaattacatcaaaagttcagtcattatagta 239  Q
    |||||||||| |||||||||||||| |||| ||| |||| | || ||||||||| ||||||  |||||||| || |||||||||||||||||| ||||||    
T  11357524 aatgacttttctggtgaagttaacactatagcatcaaaagtatagtgagtaacacccccactgtttgtacagttgcatcaaaagttcagtcatcatagta 11357425  T
Q  240 t 240  Q
    |    
T  11357424 t 11357424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 42506214 - 42506135
Alignment:
Q  161 taacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtcattatagtat 240  Q
    ||||| |||||||| |||| |||||||||||| |||||||  |||||||||| ||||||||||||||||| | |||||||    
T  42506214 taacactataacatcaaaattgtaatgagtaataccccactgtttgtacaatgacatcaaaagttcagtcctcatagtat 42506135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 195
Target Start/End: Complemental strand, 46994837 - 46994756
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacac 195  Q
    |||||||||||||  |||||||| ||  ||||| ||||||||||||||||| | ||||||||  |||||||||||||||||||    
T  46994837 aaggaaaattctacggtgaagtcgtaagaatgatttttttggtgaagttaatactataacat-caaaatgtaatgagtaacac 46994756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 230
Target Start/End: Original strand, 21193595 - 21193712
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| || |||||||   |||||||||| |||||||||||||| | |   || |||| |||  |||||||||||||||  |||||| | |    
T  21193595 aaggaaaattctatggtaaagtcatgagaatgacttttctggtgaagttaacactgttgaatcaaaagtgttgtgagtaacaccccactgtttgtagagt 21193694  T
Q  213 tacatcaaaagttcagtc 230  Q
     |||||||||||||||||    
T  21193695 gacatcaaaagttcagtc 21193712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 230
Target Start/End: Complemental strand, 44186660 - 44186571
Alignment:
Q  141 aatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtc 230  Q
    ||||| ||||||||||||||||||| |||| ||| |||| |||  ||||||||||||| |  ||| |||| | |||||||||||||||||    
T  44186660 aatgatttttttggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccgctgtttatacagtgacatcaaaagttcagtc 44186571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 147 - 227
Target Start/End: Original strand, 3362276 - 3362356
Alignment:
Q  147 ttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttca 227  Q
    ||||||||||||||||||| |||| ||| | |||| || ||||||||| ||||| ||||||||| |  |||||||||||||    
T  3362276 ttttttggtgaagttaacactatagcatcagaaatatagtgagtaacatcccactatttgtacagtggcatcaaaagttca 3362356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 240
Target Start/End: Complemental strand, 52041109 - 52040982
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacacccc-accatttgtacaat 212  Q
    |||||||||||   ||||||||||   |||||||||| |||||||||||| | |||||||| |||| |||| |||||||| |||| |   |||||| | |    
T  52041109 aggaaaattctgaggtgaagtcatgagaatgacttttctggtgaagttaatactataacatcaaaagtgtagtgagtaactccccaaatgtttgtatagt 52041010  T
Q  213 tacatcaaaagttcagtcattatagtat 240  Q
      |||||||||||||||||| |||||||    
T  52041009 ggcatcaaaagttcagtcatcatagtat 52040982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 230
Target Start/End: Original strand, 22450957 - 22451074
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| ||||||||||   ||||| |||| ||||||||| |||| |||| ||| |||| |||| |||||| |||| |||  ||||||   |    
T  22450957 aaggaaaattctatggtgaagtcatgagaatgatttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcacctcactgtttgtatggt 22451056  T
Q  213 tacatcaaaagttcagtc 230  Q
      ||||||||||||||||    
T  22451057 ggcatcaaaagttcagtc 22451074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 200
Target Start/End: Original strand, 44891498 - 44891582
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccac 200  Q
    |||||||| ||  ||||||||||  ||||||||||| |||||||||||||| |||||||| |||| |||  ||||||||| |||||    
T  44891498 ggaaaattatacggtgaagtcatgaaaatgactttt-tggtgaagttaacactataacatcaaaagtgttgtgagtaacatcccac 44891582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 205
Target Start/End: Original strand, 2613895 - 2613971
Alignment:
Q  129 tgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccattt 205  Q
    |||||||||  |||||||||||||| ||||||||||| |||||||  |||| |||  ||||||||||| ||| ||||    
T  2613895 tgaagtcattaaaatgacttttttgttgaagttaacactataacaccaaaagtgttgtgagtaacaccacactattt 2613971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 230
Target Start/End: Original strand, 11466814 - 11466930
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| |||||||| |   |||||||||| || ||||||||| | ||||||||   || |||  |||||||||||||||  |||||||| |     
T  11466814 aggaaaattctatggtgaagtcttgagaatgacttttctgatgaagttaagactataacatcgcaagtgttgtgagtaacaccccactgtttgtacagtg 11466913  T
Q  214 acatcaaaagttcagtc 230  Q
     ||||||||||| ||||    
T  11466914 gcatcaaaagtttagtc 11466930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 39282642 - 39282757
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| ||||||||||  |||||| |||| || | || |||||| |||||||| |||| |||  ||||||| |||||||  ||| |||| |    
T  39282642 aaggaaaattctatggtgaagtcatgaaaatgatttttctgataaaattaacactataacatcaaaactgt-gtgagtaataccccactgtttatacagt 39282740  T
Q  213 tacatcaaaagttcagt 229  Q
      |||||||||||||||    
T  39282741 ggcatcaaaagttcagt 39282757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 49359676 - 49359628
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaa 163  Q
    |||||||||||| ||||||||||  ||||||||||||| ||||||||||    
T  49359676 ggaaaattctatggtgaagtcatgaaaatgactttttttgtgaagttaa 49359628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 55343471 - 55343403
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaat 181  Q
    |||||||||||||| |||||||||   ||||||||||| || ||||||||||| ||||| || ||||||    
T  55343471 aaggaaaattctatggtgaagtcacgaaaatgacttttctgatgaagttaacactataatatcaaaaat 55343403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 163
Target Start/End: Complemental strand, 19606961 - 19606914
Alignment:
Q  116 gaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaa 163  Q
    ||||||||||| ||||||| ||| ||||||||||| ||||||||||||    
T  19606961 gaaaattctatggtgaagttataaaaatgacttttctggtgaagttaa 19606914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 225
Target Start/End: Complemental strand, 43976073 - 43975963
Alignment:
Q  112 caaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaa 211  Q
    |||| |||||| ||| ||||||||||   |||||||||||||   |||| |||| |||| ||| |||| |||| |||||| ||| |||| |||||||| |    
T  43976073 caagtaaaattttatggtgaagtcatgagaatgacttttttg---aagtcaacactatagcatcaaaagtgtagtgagtagcactccactatttgtacga 43975977  T
Q  212 ttacatcaaaagtt 225  Q
    | ||||||||||||    
T  43975976 tgacatcaaaagtt 43975963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 20108152 - 20108102
Alignment:
Q  112 caaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagtta 162  Q
    ||||| ||||||||| ||||||| || ||| ||||||||||||||||||||    
T  20108152 caagggaaattctatggtgaagttattcaattgacttttttggtgaagtta 20108102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 24489122 - 24489032
Alignment:
Q  140 aaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtc 230  Q
    |||||| |||||| |||||||||| | ||||  || ||||||||  |||||||||  ||||  |||| ||||| |||||||||||||||||    
T  24489122 aaatgattttttttgtgaagttaagactatagtattaaaaatgttgtgagtaacattccactgtttgcacaatgacatcaaaagttcagtc 24489032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 40640684 - 40640634
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaa 163  Q
    |||||||||||||| ||||||||||   |||||||||| ||||||||||||    
T  40640684 aaggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaa 40640634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 246
Target Start/End: Original strand, 40935995 - 40936113
Alignment:
Q  128 gtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttca 227  Q
    ||||||||||   ||||| |||| |||||||||||||| |||| ||| |||| |||   |||||||||| ||   ||| |||| | ||||||||||||||    
T  40935995 gtgaagtcatgagaatgatttttctggtgaagttaacactatagcatcaaaagtgttgcgagtaacacctcattgtttatacagtgacatcaaaagttca 40936094  T
Q  228 gtcattatagtattatcta 246  Q
    ||| | ||||||| |||||    
T  40936095 gtcctcatagtatcatcta 40936113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 200
Target Start/End: Complemental strand, 41585449 - 41585407
Alignment:
Q  158 agttaacattataacataaaaaatgtaatgagtaacaccccac 200  Q
    |||||||| |||||||| |||||| ||||||||||||||||||    
T  41585449 agttaacactataacatcaaaaatataatgagtaacaccccac 41585407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 11835790 - 11835741
Alignment:
Q  116 gaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaaca 165  Q
    ||||||||||| ||||||||||   ||||| |||||||||||||||||||    
T  11835790 gaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaaca 11835741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 33698218 - 33698263
Alignment:
Q  154 gtgaagttaacattataacataaaaaatgtaatgagtaacacccca 199  Q
    |||||||||||| |||||||| ||||||||  ||||||||||||||    
T  33698218 gtgaagttaacactataacatcaaaaatgttgtgagtaacacccca 33698263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 53229325 - 53229220
Alignment:
Q  128 gtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccc-caccatttgtacaattacatcaaaagttc 226  Q
    ||||||||||  |||| | |||| ||||||| |||||| |||| ||| |||| |||| |||| ||||||| ||   |||||||| || ||||||||||||    
T  53229325 gtgaagtcatgaaaattatttttctggtgaaattaacactatagcatcaaaagtgtagtgagcaacaccctcaatgtttgtacagttgcatcaaaagttc 53229226  T
Q  227 agtcat 232  Q
    ||||||    
T  53229225 agtcat 53229220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 29163839 - 29163895
Alignment:
Q  116 gaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataac 172  Q
    ||||||| ||| ||||||||||  |||||| |||| |||||||||||||| ||||||    
T  29163839 gaaaattttatggtgaagtcattaaaatgatttttctggtgaagttaacactataac 29163895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 230
Target Start/End: Original strand, 45174524 - 45174611
Alignment:
Q  145 acttttttggtgaagttaacattataacataaaaaatgt--aatgagtaacaccccaccatttgtacaattacatcaaaagttcagtc 230  Q
    ||||||||||||||||||||| |||||||| |||| |||    ||||||||||  |||  |||||||| |  ||||||||||||||||    
T  45174524 acttttttggtgaagttaacactataacatcaaaagtgttgtgtgagtaacacttcactgtttgtacagtagcatcaaaagttcagtc 45174611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 47930714 - 47930666
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaa 163  Q
    |||||||||||| ||||||||||  |||||| |||| ||||||||||||    
T  47930714 ggaaaattctatggtgaagtcatgaaaatgatttttctggtgaagttaa 47930666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 114 - 230
Target Start/End: Original strand, 18422646 - 18422762
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||||| ||| ||||||||||||||| ||||||||||     
T  18422646 aggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacatcaaaaatataacgagtaacaccccaccgtttgtacaatg 18422745  T
Q  214 acatcaaaagttcagtc 230  Q
    |||||||||||||||||    
T  18422746 acatcaaaagttcagtc 18422762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 115 - 240
Target Start/End: Complemental strand, 30327132 - 30327007
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||||||||||||||| ||||||||||||| ||||| |||||| |||||||| ||||||||||||||||| |||| ||| ||||||||||      
T  30327132 ggaaaattctatagtgaagtcataaaaatgactttttttgtgaatttaacactataacatcaaaaatgtaatgagtaatacccaaccgtttgtacaatag 30327033  T
Q  215 catcaaaagttcagtcattatagtat 240  Q
    |||||||||||||||||| |||||||    
T  30327032 catcaaaagttcagtcatcatagtat 30327007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 113 - 232
Target Start/End: Original strand, 15382927 - 15383046
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||| ||||||||||||||||||| |||||| ||||||||||    
T  15382927 aaggaaaattctatggtgaagttataaaaatgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatcccaccgtttgtacaat 15383026  T
Q  213 tacatcaaaagttcagtcat 232  Q
      ||||||||||||||||||    
T  15383027 gtcatcaaaagttcagtcat 15383046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 144 - 240
Target Start/End: Original strand, 51128884 - 51128980
Alignment:
Q  144 gacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtcattatagtat 240  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||    
T  51128884 gacttttttagtgaagttaacactataacataaaaaatgtaatgagtaacactccaccgtttgtacaatgacatcaaaagttcagtcattatagtat 51128980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 32267028 - 32267171
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||| ||| |||||||||||  |||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||  ||||||||||    
T  32267028 aaggaaaattttatggtgaagtcataagaatgactttttttgtgaagttaacaatataacatcaaaaatgtaatgagtaacaccccactgtttgtacaat 32267127  T
Q  213 tacatcaaaagttcagtcattatagtattatctacccaccagat 256  Q
     |||||||||||||| || | ||| ||| ||| ||||| |||||    
T  32267128 gacatcaaaagttcactcctcatattatcatcaacccatcagat 32267171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 37451295 - 37451397
Alignment:
Q  128 gtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttca 227  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||||| ||||||||||| |||||||||| ||| |||||||||| ||||||||||||||    
T  37451295 gtgaagtcataaaaatgacttttttggtaaagttaacactataacatcaaaaatgtaataagtaacaccctaccgtttgtacaatgacatcaaaagttca 37451394  T
Q  228 gtc 230  Q
    |||    
T  37451395 gtc 37451397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 115 - 244
Target Start/End: Original strand, 23999343 - 23999472
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||| ||| |||||||||||  ||||| ||||||||||||||||||| || |||||||||||| ||| |||||||||||||| ||||||| ||| |    
T  23999343 ggaaaattttatggtgaagtcataagaatgatttttttggtgaagttaacactacaacataaaaaatataacgagtaacaccccactatttgtagaatga 23999442  T
Q  215 catcaaaagttcagtcattatagtattatc 244  Q
    |||||||||||||| | | |||||||||||    
T  23999443 catcaaaagttcagccctcatagtattatc 23999472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 15752027 - 15752150
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||||||| ||||||||||   ||||||||||||||||||||||||| ||||||||||||||| || ||||||||||| |||  ||||||||||  ||    
T  15752027 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatatagtgagtaacacctcactgtttgtacaatggca 15752126  T
Q  217 tcaaaagttcagtcattatagtat 240  Q
    |||||||||||||| | |||||||    
T  15752127 tcaaaagttcagtcctcatagtat 15752150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 240
Target Start/End: Original strand, 10922724 - 10922848
Alignment:
Q  116 gaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattac 215  Q
    ||||||| ||| ||||| ||||   ||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||  |||||||||| ||    
T  10922724 gaaaattttatggtgaaatcatgagaatgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaagaccccactgtttgtacaatgac 10922823  T
Q  216 atcaaaagttcagtcattatagtat 240  Q
    |||||||||||| || | |||||||    
T  10922824 atcaaaagttcaatcctcatagtat 10922848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 37619078 - 37618960
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagt--aacaccccaccatttgtaca 210  Q
    |||||||||||||| ||||||| |||  ||||||||||||||||||||||||| |||||||| |||||| ||||||||  ||||||||||  |||||| |    
T  37619078 aaggaaaattctatggtgaagttataagaatgacttttttggtgaagttaacactataacatcaaaaatttaatgagtaaaacaccccactgtttgtaaa 37618979  T
Q  211 attacatcaaaagttcagt 229  Q
    || ||||||||||||||||    
T  37618978 atgacatcaaaagttcagt 37618960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 114 - 227
Target Start/End: Complemental strand, 19899950 - 19899837
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| |||||||||||  ||||| ||||||||||||||||||| |||||||| |||||||||| |||||||||| |||  |||||| |||     
T  19899950 aggaaaattctatggtgaagtcataataatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacacctcactgtttgtagaatg 19899851  T
Q  214 acatcaaaagttca 227  Q
     |||||||||||||    
T  19899850 gcatcaaaagttca 19899837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 114 - 230
Target Start/End: Original strand, 30254419 - 30254534
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| ||||||| |||  ||||||||||||| ||||||||||| |||||||| ||||||||||||||||| | | |||  ||||||||||     
T  30254419 aggaaaattctatggtgaagttataagaatgacttttttgttgaagttaacaatataacatcaaaaatgtaatgagtaata-cacactgtttgtacaatg 30254517  T
Q  214 acatcaaaagttcagtc 230  Q
    |||||||||||||||||    
T  30254518 acatcaaaagttcagtc 30254534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 28769651 - 28769773
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||||||| ||||||||||| |||| |||||||| |||||||||||| ||| |||| ||||||||||||||||||| |||||| ||||||||||  ||    
T  28769651 aaaattctatggtgaagtcataaaaataactttttttgtgaagttaacactatgacatcaaaaatgtaatgagtaaca-cccaccgtttgtacaatggca 28769749  T
Q  217 tcaaaagttcagtcattatagtat 240  Q
    ||||| |||| ||| | |||||||    
T  28769750 tcaaaggttcggtcctcatagtat 28769773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 8222125 - 8222238
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||  ||||||||||| ||||||| ||||| |||||||||||| |||||||| ||||||||||||||||||||| |||| |   ||||||    
T  8222125 aaggaaaattctacggtgaagtcataaaaatgacctttttagtgaagttaacactataacatcaaaaatgtaatgagtaacaccacaccgt---tacaat 8222221  T
Q  213 tacatcaaaagttcagt 229  Q
      |||||||||||||||    
T  8222222 ggcatcaaaagttcagt 8222238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 114 - 240
Target Start/End: Complemental strand, 10182189 - 10182063
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||||||| | | ||||||||||||| || || ||||||| ||||  |||||||| |     
T  10182189 aggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactgtaacataaaaaatatagtgcgtaacacgccactgtttgtacagtg 10182090  T
Q  214 acatcaaaagttcagtcattatagtat 240  Q
     |||||||||||||||| | |||||||    
T  10182089 gcatcaaaagttcagtcctcatagtat 10182063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 1547281 - 1547397
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| ||||||||||   |||||||||| |||||||||||||| |||||||||||||||||  |||||||||| ||||  ||||| || |    
T  1547281 aaggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgttgtgagtaacactccactgtttgtgcagt 1547380  T
Q  213 tacatcaaaagttcagt 229  Q
      |||||||||||||||    
T  1547381 ggcatcaaaagttcagt 1547397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 114 - 230
Target Start/End: Original strand, 2959743 - 2959859
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| ||||||||||  ||||||||||| || ||||||||||| |||||||| |||| |||| | ||||||| |||||  |||||||| |     
T  2959743 aggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtaagtaacatcccactgtttgtacagtg 2959842  T
Q  214 acatcaaaagttcagtc 230  Q
    |||||||||||||||||    
T  2959843 acatcaaaagttcagtc 2959859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 28564936 - 28564836
Alignment:
Q  140 aaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtcattatagta 239  Q
    |||||| ||||||| ||||||||||| |||||||| |||||||||||||||||||||  ||  |||||||||| ||||||||||||||||| | ||||||    
T  28564936 aaatgatttttttgatgaagttaacactataacatcaaaaatgtaatgagtaacaccttactgtttgtacaatgacatcaaaagttcagtcctcatagta 28564837  T
Q  240 t 240  Q
    |    
T  28564836 t 28564836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 115 - 227
Target Start/End: Original strand, 42721035 - 42721147
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||||||  |||||| |||||||||||||||| |  |||| |||||||||| || |||||||||||||||  |||||||| | |    
T  42721035 ggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttagccctatatcataaaaaatatagtgagtaacaccccactgtttgtacagtaa 42721134  T
Q  215 catcaaaagttca 227  Q
    |||||||||||||    
T  42721135 catcaaaagttca 42721147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 113 - 230
Target Start/End: Original strand, 48620631 - 48620748
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    ||||||||||||||  |||||| ||  ||||||||||| | |||||||||||| |||||||| |||| |||  |||||||||||||||  |||||||| |    
T  48620631 aaggaaaattctatgttgaagttattaaaatgacttttcttgtgaagttaacaatataacatcaaaagtgttgtgagtaacaccccactgtttgtacagt 48620730  T
Q  213 tacatcaaaagttcagtc 230  Q
     |||||||||||||||||    
T  48620731 gacatcaaaagttcagtc 48620748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 30254853 - 30254936
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccc 197  Q
    ||||||||||||| |||||||||||  ||||||||||||| ||||||||||| |||||||| ||||||||||||  ||||||||    
T  30254853 aggaaaattctatggtgaagtcataataatgacttttttgatgaagttaacactataacatcaaaaatgtaatggataacaccc 30254936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 230
Target Start/End: Complemental strand, 238690 - 238578
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    ||||||||||||||||||||   |||| ||||||||||||||||||||| ||||  || ||||||||  |||||||||  ||||  |||||||||| |||    
T  238690 aaaattctatagtgaagtcacgaaaataacttttttggtgaagttaacactatagtattaaaaatgttgtgagtaaca-tccactgtttgtacaatgaca 238592  T
Q  217 tcaaaagttcagtc 230  Q
    ||||||||||||||    
T  238591 tcaaaagttcagtc 238578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 227
Target Start/End: Complemental strand, 9903209 - 9903122
Alignment:
Q  140 aaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttca 227  Q
    |||||||||||||| ||||||||||| |||||||| |||| |||| ||||||||||||| |  |||||||| | ||||||||||||||    
T  9903209 aaatgacttttttgatgaagttaacactataacatcaaaactgtagtgagtaacaccccgctgtttgtacagtgacatcaaaagttca 9903122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 232
Target Start/End: Complemental strand, 34012559 - 34012440
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| ||||||||||  ||||||| ||| || ||||||||||| |||||||| || | |||| |||||||||| ||||  |||||| | |    
T  34012559 aaggaaaattctatggtgaagtcatgaaaatgacgtttatgatgaagttaacactataacatcaacactgtagtgagtaacactccactgtttgtaaagt 34012460  T
Q  213 tacatcaaaagttcagtcat 232  Q
      ||||||||||||||||||    
T  34012459 ggcatcaaaagttcagtcat 34012440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 227
Target Start/End: Original strand, 38823210 - 38823322
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||||||   |||||||||| |||| ||||||||| |||| ||| |||| |||   |||||||||||||| ||||||||| |      
T  38823210 ggaaaattctatggtgaagtcatgagaatgacttttctggttaagttaacactatagcatcaaaattgttgcgagtaacaccccactatttgtacagtgt 38823309  T
Q  215 catcaaaagttca 227  Q
    |||||||||||||    
T  38823310 catcaaaagttca 38823322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 240
Target Start/End: Original strand, 21289661 - 21289793
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataa-------aaaatgtaatgagtaacaccccaccatttgt 207  Q
    |||||| ||||| ||||||||||   |||||||||| |||||||||||||| |||| |||||       |||||||| |||||||||||||||  |||||    
T  21289661 ggaaaaatctattgtgaagtcatgagaatgacttttctggtgaagttaacactatatcataaataataaaaaatgtagtgagtaacaccccactgtttgt 21289760  T
Q  208 acaattacatcaaaagttcagtcattatagtat 240  Q
    ||| |  ||||||||||||||||  ||||||||    
T  21289761 acagtggcatcaaaagttcagtccctatagtat 21289793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 32216088 - 32216166
Alignment:
Q  152 tggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtc 230  Q
    |||||||||||||| |||||||| ||||||||| |||||||||| ||||  ||||||||||  | ||||||||||||||    
T  32216088 tggtgaagttaacactataacatcaaaaatgtagtgagtaacacaccactgtttgtacaatggcgtcaaaagttcagtc 32216166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 113 - 230
Target Start/End: Complemental strand, 11742532 - 11742415
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||| ||| ||||||| ||   |||||||||| |||||||||||||| ||||  || |||| |||  | |||||||||||||  |||||||| |    
T  11742532 aaggaaaattttatcgtgaagttatgagaatgacttttctggtgaagttaacactatattatcaaaagtgttgtaagtaacaccccactgtttgtacagt 11742433  T
Q  213 tacatcaaaagttcagtc 230  Q
     |||||||||||||||||    
T  11742432 gacatcaaaagttcagtc 11742415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 16415638 - 16415723
Alignment:
Q  112 caaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccc 197  Q
    ||||||||||||||  ||||||||||   |||||||||| |||||||||||||| |||| ||| |||| |||| ||||||||||||    
T  16415638 caaggaaaattctaaggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacaccc 16415723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 240
Target Start/End: Original strand, 47279198 - 47279310
Alignment:
Q  128 gtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttca 227  Q
    ||||||||||   ||||| ||||||||||||||||||||||||  || |||| |||  |||||||||||||||  |||||||| |  |||| ||||||||    
T  47279198 gtgaagtcatgagaatgatttttttggtgaagttaacattatactatcaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcgaaagttca 47279297  T
Q  228 gtcattatagtat 240  Q
    ||| | |||||||    
T  47279298 gtcctcatagtat 47279310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 201
Target Start/End: Original strand, 25160365 - 25160451
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccacc 201  Q
    ||||||||||||   |||||||||| ||||||  |||||| |||| ||||||| ||||||||||||||||||||||||| | ||||||    
T  25160365 aggaaaattctacgatgaagtcataaaaatgatatttttgatgaaattaacat-ataacataaaaaatgtaatgagtaatatcccacc 25160451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 240
Target Start/End: Complemental strand, 7079254 - 7079118
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccacca-----------t 203  Q
    |||||||| ||| || |||||||   ||||||||||||||||||||||||| ||||| || |||| |||  ||||||||||||||| |           |    
T  7079254 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaacactataatatcaaaagtgttgtgagtaacaccccactaacacctcactgt 7079155  T
Q  204 ttgtacaattacatcaaaagttcagtcattatagtat 240  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  7079154 ttgtacaatgacatcaaaagttcagtcatcatagtat 7079118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 27763458 - 27763408
Alignment:
Q  147 ttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccc 197  Q
    |||||| |||||||||||| |||||||| ||||||||||||||||||||||    
T  27763458 tttttttgtgaagttaacactataacatcaaaaatgtaatgagtaacaccc 27763408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 46931439 - 46931492
Alignment:
Q  147 ttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccac 200  Q
    |||||| |||||||||||| |||||||| ||||||||||||||||| |||||||    
T  46931439 tttttttgtgaagttaacactataacatcaaaaatgtaatgagtaataccccac 46931492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 230
Target Start/End: Complemental strand, 27267376 - 27267264
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||| ||| ||||||||||   ||||| ||||||||||||||||||| ||   ||||||||||||| ||||| |||||||||  |||||||| |      
T  27267376 ggaaaattatat-gtgaagtcatgagaatgatttttttggtgaagttaacactag--cataaaaaatgtagtgagtgacaccccactgtttgtacagtgg 27267280  T
Q  215 catcaaaagttcagtc 230  Q
    ||| ||||||||||||    
T  27267279 cattaaaagttcagtc 27267264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 3309144 - 3309226
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccc 197  Q
    |||||||||||| || |||||||   |||||||||| |||| ||||||||| |||||||| |||| |||  ||||||||||||    
T  3309144 ggaaaattctatggtaaagtcatgagaatgacttttctggtaaagttaacactataacatcaaaagtgttgtgagtaacaccc 3309226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 27564053 - 27563971
Alignment:
Q  147 ttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagt 229  Q
    |||||| |||||||||||| |||||| | |||||| || |||||||||| ||||  |||||| | | ||||||||||||||||    
T  27564053 ttttttagtgaagttaacactataactttaaaaatatagtgagtaacactccactgtttgtatagtgacatcaaaagttcagt 27563971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 230
Target Start/End: Original strand, 3534926 - 3535043
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    ||||||||||||||  |||||||||   ||| | |||| | |||||||||||| |||||||| |||| |||  |||||||||||  ||  ||||| || |    
T  3534926 aaggaaaattctattatgaagtcattagaattaattttctagtgaagttaacactataacatcaaaagtgttgtgagtaacaccttactgtttgtgcagt 3535025  T
Q  213 tacatcaaaagttcagtc 230  Q
     |||||||||||||||||    
T  3535026 gacatcaaaagttcagtc 3535043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 45319610 - 45319654
Alignment:
Q  118 aaattctatagtgaagtcatacaaatgacttttttggtgaagtta 162  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||    
T  45319610 aaattctatggtgaagtcattcaattgacttttttggtgaagtta 45319654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 230
Target Start/End: Complemental strand, 31621733 - 31621618
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||  ||||||||||   |||||||||| | ||||||| |||| |||||||| |||  |||| |||||| |||||| | ||||||||  |      
T  31621733 ggaaaattctacggtgaagtcatgagaatgacttttctagtgaagtcaacactataacatcaaaggtgtattgagtagcaccccgctatttgtacggtgg 31621634  T
Q  215 catcaaaagttcagtc 230  Q
    |||||||| |||||||    
T  31621633 catcaaaaattcagtc 31621618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 14758050 - 14758152
Alignment:
Q  128 gtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttca 227  Q
    ||||||||||   |||||||||| ||||||||| |||| |||||||| |||| |||| |||||| ||| | ||  |||||||  |  |||||||||||||    
T  14758050 gtgaagtcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcacacaactgtttgtacggtggcatcaaaagttca 14758149  T
Q  228 gtc 230  Q
    |||    
T  14758150 gtc 14758152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 22170748 - 22170814
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaa 179  Q
    |||||||||||||| ||||| ||||  ||||||||||| |  ||||||||||| |||||||| ||||    
T  22170748 aaggaaaattctatggtgaaatcatgaaaatgacttttctaatgaagttaacactataacatcaaaa 22170814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 27227657 - 27227607
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaaca 165  Q
    |||||||||||| ||||||||||   ||||| |||||||||||||||||||    
T  27227657 ggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaaca 27227607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 13876968 - 13876919
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaa 163  Q
    ||||||||||||| ||||||| ||  ||||||||||| ||||||||||||    
T  13876968 aggaaaattctatggtgaagttatgaaaatgacttttatggtgaagttaa 13876919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 240
Target Start/End: Original strand, 40884841 - 40884934
Alignment:
Q  147 ttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtcattatagtat 240  Q
    |||| ||||||||| ||||  ||||||| |||| |||| |||||| ||||||||  |||||||  |  ||||||||||||||||  ||||||||    
T  40884841 ttttctggtgaagtcaacaccataacatcaaaagtgtagtgagtagcaccccactgtttgtacggtggcatcaaaagttcagtccctatagtat 40884934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 47682673 - 47682595
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacac 195  Q
    |||||||| ||| ||||||||||   | |||||||||||||||||||||||   || ||||||||||||  ||||||||||    
T  47682673 ggaaaattttatggtgaagtcatgagagtgacttttttggtgaagttaaca--ctagcataaaaaatgttgtgagtaacac 47682595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 49410607 - 49410558
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagtta 162  Q
    |||||||||||||| |||||||  | ||||||||||||| ||||||||||    
T  49410607 aaggaaaattctatggtgaagttcttcaaatgactttttcggtgaagtta 49410558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 15168083 - 15168179
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtac 209  Q
    |||||||||||||| ||||||| ||   ||||  |||| ||||||||| |||| |||| ||| |||| |||| |||||| ||||||||  |||||||    
T  15168083 aaggaaaattctatcgtgaagtgatgagaatgctttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcaccccactgtttgtac 15168179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 7e-40; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 113 - 244
Target Start/End: Original strand, 5627389 - 5627520
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||  |||||||||||  ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||| |||    
T  5627389 aaggaaaattctaaggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatataatgagtaacaccccactatttgtagaat 5627488  T
Q  213 tacatcaaaagttcagtcattatagtattatc 244  Q
     ||||||||||||||| | | |||||||||||    
T  5627489 gacatcaaaagttcagccctcatagtattatc 5627520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 1945831 - 1945947
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgactttt-ttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaa 211  Q
    |||||||||||||  |||||||||||  |||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||  |||||| ||    
T  1945831 aaggaaaattctacggtgaagtcataagaatgactttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtagaa 1945930  T
Q  212 ttacatcaaaagttcag 228  Q
    | |||||||||||||||    
T  1945931 tgacatcaaaagttcag 1945947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 4319009 - 4318895
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| ||||||||||   ||||||||||||||||||||||||| |||||||| |||| ||| ||||||||||||||||  |||||||| |    
T  4319009 aaggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaagtgttatgagtaacaccccactgtttgtacagt 4318910  T
Q  213 tacatcaaaagttca 227  Q
     ||||||||||||||    
T  4318909 gacatcaaaagttca 4318895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 114 - 228
Target Start/End: Complemental strand, 7055400 - 7055286
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||| ||| |||||||||||  ||||| ||||||||||||||||||| ||||||||||||||| |||| ||||||||| ||| ||||||| |||     
T  7055400 aggaaaattttatggtgaagtcataagaatgatttttttggtgaagttaacactataacataaaaaatataattagtaacacctcactatttgtagaatg 7055301  T
Q  214 acatcaaaagttcag 228  Q
    |||||||||||||||    
T  7055300 acatcaaaagttcag 7055286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 114 - 230
Target Start/End: Original strand, 8513232 - 8513348
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| ||||||||||   |||||||||| |||||||||||||| ||||| || |||| |||  |||||||||||||||  |||||||| |     
T  8513232 aggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataatatcaaaagtgttgtgagtaacaccccactgtttgtacagtg 8513331  T
Q  214 acatcaaaagttcagtc 230  Q
    |||||||||||||||||    
T  8513332 acatcaaaagttcagtc 8513348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 21017300 - 21017181
Alignment:
Q  111 acaaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtaca 210  Q
    ||||| |||||| ||  |||||||||   |||||||||||||||||||||||||||| ||  |||||||||||  ||||||||||||||  |||||||||    
T  21017300 acaagaaaaattatacggtgaagtcacgaaaatgacttttttggtgaagttaacattgtagtataaaaaatgttgtgagtaacaccccattatttgtaca 21017201  T
Q  211 attacatcaaaagttcagtc 230  Q
    ||  ||||||||||||||||    
T  21017200 atggcatcaaaagttcagtc 21017181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 227
Target Start/End: Complemental strand, 3880124 - 3880011
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| |||||||||    |||||||||| |||||||||||||||||||  || |||| |||  |||||||||||| ||  ||||||||||     
T  3880124 aggaaaattctatggtgaagtcacgagaatgacttttctggtgaagttaacattatagtatcaaaagtgttgtgagtaacaccctactgtttgtacaatg 3880025  T
Q  214 acatcaaaagttca 227  Q
    ||||||||||||||    
T  3880024 acatcaaaagttca 3880011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 113 - 240
Target Start/End: Original strand, 18498431 - 18498559
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaaca-ccccaccatttgtacaa 211  Q
    |||||||| ||||||||||||||||   |||||||||  ||||||||||||||||||| ||| |||| |||| |||| |||| ||||||  ||||||||     
T  18498431 aaggaaaaatctatagtgaagtcatgagaatgactttcctggtgaagttaacattatagcatcaaaagtgtagtgagcaacacccccacagtttgtacag 18498530  T
Q  212 ttacatcaaaagttcagtcattatagtat 240  Q
    |  |||||||||||||||| | |||||||    
T  18498531 tggcatcaaaagttcagtcctcatagtat 18498559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 6091363 - 6091253
Alignment:
Q  118 aaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacat 217  Q
    ||||||||| ||||||||||  |||| | ||||||||| ||||||||||  |||||||||||||||| |||||||||| |||   ||||||||||  |||    
T  6091363 aaattctattgtgaagtcatgaaaataatttttttggtaaagttaacatg-taacataaaaaatgtagtgagtaacacaccattgtttgtacaatgccat 6091265  T
Q  218 caaaagttcagt 229  Q
    ||||||||||||    
T  6091264 caaaagttcagt 6091253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 230
Target Start/End: Complemental strand, 33893186 - 33893071
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| || |||||||   ||| | |||||| |||||||||||| |||||||| |||| |||  ||||||||||||||| ||||||||||| |    
T  33893186 ggaaaattctatggtaaagtcattagaataatttttttagtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactatttgtacaatga 33893087  T
Q  215 catcaaaagttcagtc 230  Q
     || ||||||||||||    
T  33893086 tattaaaagttcagtc 33893071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 15491641 - 15491728
Alignment:
Q  141 aatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcag 228  Q
    |||||||||| | |||||||||||||| |||||| |||| |||  ||||||||||||||| ||||||||| |  ||||||||||||||    
T  15491641 aatgacttttctcgtgaagttaacattgtaacatcaaaagtgttgtgagtaacaccccactatttgtacagtggcatcaaaagttcag 15491728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 115 - 244
Target Start/End: Complemental strand, 7235218 - 7235090
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||| ||   ||||||||||  |||||||| |||| |||||||| |||| |||| |||||| ||||||||  |||||||  |      
T  7235218 ggaaaattctatggtgaagttatgagaatgacttttccggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactgtttgtacggtgc 7235119  T
Q  215 catcaaaagttcagtcattatagtattatc 244  Q
    |||||||||||||||| | |||||||||||    
T  7235118 catcaaaagttcagtc-tcatagtattatc 7235090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 117 - 179
Target Start/End: Complemental strand, 30353540 - 30353478
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaa 179  Q
    |||||||||| ||||||||||   |||||||||| ||||||||||||||||||||||| ||||    
T  30353540 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacattataacatcaaaa 30353478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 19631744 - 19631797
Alignment:
Q  110 tacaaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaa 163  Q
    ||||||||||||||||| |||||||||||  |||||||||| ||||||||||||    
T  19631744 tacaaggaaaattctatggtgaagtcataagaatgacttttctggtgaagttaa 19631797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 230
Target Start/End: Original strand, 29182165 - 29182278
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||| ||| ||||||||||   ||||| ||| ||| ||||||||||| |||||||| |||| |||  |||||||||||||||  ||| |||| |  ||    
T  29182165 aaaattttatggtgaagtcatgagaatgattttattgatgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttatacagtgtca 29182264  T
Q  217 tcaaaagttcagtc 230  Q
    ||||||||||||||    
T  29182265 tcaaaagttcagtc 29182278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 6088910 - 6089033
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||||||| ||||||||||   ||||| |||| |||||||||||||| ||||  || |||| |||  |||||||| ||||||  |||||| | |  ||    
T  6088910 aaaattctatggtgaagtcatgagaatgatttttctggtgaagttaacactatagtatcaaaagtgttgtgagtaacgccccactgtttgtaaagtggca 6089009  T
Q  217 tcaaaagttcagtcattatagtat 240  Q
    |||||||||||||||  |||||||    
T  6089010 tcaaaagttcagtcaccatagtat 6089033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 26301975 - 26301923
Alignment:
Q  111 acaaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaa 163  Q
    |||||||||||| ||| ||||||||||| |||||| |||||| ||||||||||    
T  26301975 acaaggaaaattatatggtgaagtcataaaaatgatttttttcgtgaagttaa 26301923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 20768087 - 20768162
Alignment:
Q  116 gaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagta 191  Q
    ||||||||||| ||||||||||   |||||||||| ||||||||| |||| |||| ||| |||| |||| ||||||    
T  20768087 gaaaattctatggtgaagtcatgagaatgacttttctggtgaagtcaacactatagcatcaaaagtgtagtgagta 20768162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 111 - 228
Target Start/End: Complemental strand, 34361706 - 34361589
Alignment:
Q  111 acaaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtaca 210  Q
    |||||||||||||||| |||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||| |    
T  34361706 acaaggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccactgtttgtaga 34361607  T
Q  211 attacatcaaaagttcag 228  Q
    || |||| ||||||||||    
T  34361606 atgacattaaaagttcag 34361589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 4396322 - 4396418
Alignment:
Q  111 acaaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgt 207  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  4396322 acaaggaaaattctatagtgaagtcataaaaatgacttttttagtgaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgt 4396418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 113 - 240
Target Start/End: Original strand, 3042609 - 3042736
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| ||||| ||||| |||||| ||||||||||||||||||| ||||||||| |||||||||||||||| |||||||| ||| ||||||    
T  3042609 aaggaaaattctatggtgaaatcataaaaatgatttttttggtgaagttaacactataacatacaaaatgtaatgagtaataccccaccgtttatacaat 3042708  T
Q  213 tacatcaaaagttcagtcattatagtat 240  Q
     ||||||||| ||||||||||| |||||    
T  3042709 gacatcaaaaattcagtcattagagtat 3042736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 105 - 228
Target Start/End: Complemental strand, 32912801 - 32912678
Alignment:
Q  105 ataattacaaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatt 204  Q
    ||||| |||||||||||||||| |||||||||||  ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |  |||    
T  32912801 ataatcacaaggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccctagtatt 32912702  T
Q  205 tgtacaattacatcaaaagttcag 228  Q
    |||| ||| | |||||||||||||    
T  32912701 tgtagaatgatatcaaaagttcag 32912678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 114 - 240
Target Start/End: Complemental strand, 37663951 - 37663827
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| |||||||||||  ||||||||||||| ||||||||||| ||  |||| |||| ||||||||||||||||||||  ||||||||||     
T  37663951 aggaaaattctatggtgaagtcataagaatgacttttttgatgaagttaacacta--acattaaaactgtaatgagtaacaccccactgtttgtacaatg 37663854  T
Q  214 acatcaaaagttcagtcattatagtat 240  Q
    ||||||||||||||||| | |||||||    
T  37663853 acatcaaaagttcagtcctcatagtat 37663827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 50697240 - 50697354
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||  ||||||||||| |||||| |||||| ||||||| |||| ||||||||||||||| ||| ||||||||||| ||| ||||||||||    
T  50697240 aaggaaaattctacggtgaagtcataaaaatgatttttttagtgaagtaaacactataacataaaaaatataacgagtaacaccctaccgtttgtacaat 50697339  T
Q  213 tacatcaaaagttca 227  Q
     ||||||||||||||    
T  50697340 gacatcaaaagttca 50697354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 115 - 240
Target Start/End: Complemental strand, 19089664 - 19089539
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| |||||||||||  ||| ||||||||| ||||||||||| ||||| || |||| ||||||||||||||||||||  |||||| ||| |    
T  19089664 ggaaaattctatggtgaagtcataagaataacttttttgatgaagttaacactataatatcaaaattgtaatgagtaacaccccactgtttgtataatga 19089565  T
Q  215 catcaaaagttcagtcattatagtat 240  Q
    |||||||||||||||| | |||||||    
T  19089564 catcaaaagttcagtcctcatagtat 19089539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 113 - 240
Target Start/End: Complemental strand, 25701270 - 25701143
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||| ||| ||||||||||   ||||||||||||||| |||||||||||||||||| |||| |||| |||||||||||| ||  |||||||| |    
T  25701270 aaggaaaattttatggtgaagtcatgataatgacttttttggtaaagttaacattataacatcaaaagtgtagtgagtaacaccctactgtttgtacagt 25701171  T
Q  213 tacatcaaaagttcagtcattatagtat 240  Q
     ||||||||||||||||| | |||||||    
T  25701170 gacatcaaaagttcagtcctcatagtat 25701143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 114 - 240
Target Start/End: Original strand, 25184112 - 25184238
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| ||||||||||   ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| | ||  ||||||||||     
T  25184112 aggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaacactctactgtttgtacaatg 25184211  T
Q  214 acatcaaaagttcagtcattatagtat 240  Q
    ||||| |||||||| || | |||||||    
T  25184212 acatccaaagttcaatcttcatagtat 25184238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 35021248 - 35021151
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtaca 210  Q
    |||||||||||||| ||||||||||  ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||| ||||  ||||||||    
T  35021248 aaggaaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacattataacatcaaaaatgtagtgagtaacacaccactgtttgtaca 35021151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 115 - 230
Target Start/End: Complemental strand, 19440860 - 19440744
Alignment:
Q  115 ggaaaattctatagtgaa-gtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    |||||||||||| ||||| |||||   ||||||||||||||||| ||||||| |||||||| ||||||||||||| |||||| ||||| ||||||||||     
T  19440860 ggaaaattctatggtgaaagtcatgagaatgacttttttggtgatgttaacactataacatcaaaaatgtaatgattaacactccaccgtttgtacaatg 19440761  T
Q  214 acatcaaaagttcagtc 230  Q
     ||||||||||||||||    
T  19440760 gcatcaaaagttcagtc 19440744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 9139245 - 9139357
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| ||||||||||  || |||||||||||||||||||||| ||||| |||||||||  || |||||||||||||||| |||||||| |    
T  9139245 aaggaaaattctatggtgaagtcatgaaattgacttttttggtgaagttaacgttatagcataaaaaa--tagtgagtaacaccccaccgtttgtacagt 9139342  T
Q  213 tacatcaaaagttca 227  Q
     |||| |||||||||    
T  9139343 gacataaaaagttca 9139357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 113 - 240
Target Start/End: Complemental strand, 55478108 - 55477977
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccac----catttgta 208  Q
    |||||||||||||| ||||||||||   ||||| ||||||||||||||||||| |||||||| |||||||||| ||||||||| ||||      ||||||    
T  55478108 aaggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacactccactgtttgtttgta 55478009  T
Q  209 caattacatcaaaagttcagtcattatagtat 240  Q
    |||| ||||||||||||||||| | |||||||    
T  55478008 caatgacatcaaaagttcagtcctcatagtat 55477977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 117 - 225
Target Start/End: Original strand, 27396618 - 27396726
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||||||| ||||||||||   |||||||||| ||||||||||||||||||| ||| |||| ||| ||||||||||||| ||  |||||||||| |||    
T  27396618 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacattatagcattaaaagtgttatgagtaacaccctactgtttgtacaatgaca 27396717  T
Q  217 tcaaaagtt 225  Q
    |||||||||    
T  27396718 tcaaaagtt 27396726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 115 - 230
Target Start/End: Original strand, 39397918 - 39398033
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||||||   |||||||||| |||||||||||||| |||||||| |||| |||  ||||||||||||||   |||||||| | |    
T  39397918 ggaaaattctatggtgaagtcattagaatgacttttatggtgaagttaacactataacattaaaagtgttgtgagtaacaccccattgtttgtacagtga 39398017  T
Q  215 catcaaaagttcagtc 230  Q
    ||||||||||||||||    
T  39398018 catcaaaagttcagtc 39398033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 227
Target Start/End: Original strand, 17167715 - 17167825
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||||||| ||||||| |   ||||||||||| || ||||||||||||||||| || ||||||||  |||||||||||||||  |||||||||| |||    
T  17167715 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatgaca 17167814  T
Q  217 tcaaaagttca 227  Q
    |||||||||||    
T  17167815 tcaaaagttca 17167825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 227
Target Start/End: Original strand, 17173292 - 17173402
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||||||| ||||||| |   ||||||||||| || ||||||||||||||||| || ||||||||  |||||||||||||||  |||||||||| |||    
T  17173292 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatgaca 17173391  T
Q  217 tcaaaagttca 227  Q
    |||||||||||    
T  17173392 tcaaaagttca 17173402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 228
Target Start/End: Original strand, 42199728 - 42199842
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||| ||||| ||||| |||||  ||||| ||||||||||||||||| | |||||||| ||||||||||||||||| ||||||  ||||||| |||     
T  42199728 aggaaaaatctatggtgaaatcataagaatgatttttttggtgaagttaatactataacatcaaaaatgtaatgagtaataccccattatttgtagaatg 42199827  T
Q  214 acatcaaaagttcag 228  Q
    |||| ||||||||||    
T  42199828 acataaaaagttcag 42199842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 117 - 230
Target Start/End: Complemental strand, 36493897 - 36493784
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||||||| ||||||||||  |||| ||||||||||||||||||| | |||| ||| |||||| || ||||||||||||||   |||||||| | |||    
T  36493897 aaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactataccatcaaaaatatagtgagtaacaccccattgtttgtacagtgaca 36493798  T
Q  217 tcaaaagttcagtc 230  Q
    ||||||||||||||    
T  36493797 tcaaaagttcagtc 36493784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 240
Target Start/End: Complemental strand, 29584411 - 29584286
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| |||||||| |   |||||||||| |||||||||||||| |||||||| |||| |||  ||||||||||| |||  ||||||||||    
T  29584411 aaggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaagtgt--tgagtaacacctcactgtttgtacaat 29584314  T
Q  213 tacatcaaaagttcagtcattatagtat 240  Q
      |||||||||||||||| | |||||||    
T  29584313 ggcatcaaaagttcagtcttcatagtat 29584286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 46884245 - 46884175
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaa 185  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||   |||||||||||||||||    
T  46884245 ggaaaattctatagtgaagtcataaaaatgacttttttggcgaagttaacaccgtaacataaaaaatgtaa 46884175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 200
Target Start/End: Original strand, 53124287 - 53124372
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccac 200  Q
    |||||||| |||  |||||||||  |||||| ||||||||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  53124287 ggaaaattatatgatgaagtcattaaaatgatttttttggtgaagttaacactataacatcaaaaatataatgagtaacaccccac 53124372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 113 - 197
Target Start/End: Complemental strand, 7152319 - 7152235
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccc 197  Q
    |||||||||||||| |||||||||| | |||||||||| |||| |||||||||||||||||| |||| | || ||||||||||||    
T  7152319 aaggaaaattctatggtgaagtcatgctaatgacttttctggtaaagttaacattataacatcaaaagtatagtgagtaacaccc 7152235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 54499424 - 54499324
Alignment:
Q  141 aatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtac-aattacatcaaaagttcagtcattatagta 239  Q
    |||||||||| |||||||||||||| |||| ||| |||| |||  |||||||||||||||| ||||||| ||| |||||||||||||||||  |||||||    
T  54499424 aatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccaccgtttgtactaatgacatcaaaagttcagtctctatagta 54499325  T
Q  240 t 240  Q
    |    
T  54499324 t 54499324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 225
Target Start/End: Complemental strand, 879760 - 879649
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||| ||  ||||||||||   ||| | |||||||||||||| |||| |||||||| ||||||||||||||||||||| ||   ||||||||||     
T  879760 aggaaaattttaaggtgaagtcatgagaataatttttttggtgaagtaaacactataacatcaaaaatgtaatgagtaacacctcattgtttgtacaatg 879661  T
Q  214 acatcaaaagtt 225  Q
    ||||||||||||    
T  879660 acatcaaaagtt 879649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 220
Target Start/End: Original strand, 4205114 - 4205221
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| |||||||||   ||||||||||| || ||||||||||| ||||| || ||||||||  ||| |||||||||||  ||||||||||    
T  4205114 aaggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttctgaataacaccccactgtttgtacaat 4205213  T
Q  213 tacatcaa 220  Q
     |||||||    
T  4205214 gacatcaa 4205221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 37775670 - 37775780
Alignment:
Q  116 gaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattac 215  Q
    ||||||||||  ||||||||||  |||||| |||||||||||||||| || ||||| || ||||||||  |||||||||||||||  |||||||| |  |    
T  37775670 gaaaattctacggtgaagtcattaaaatgatttttttggtgaagttagcactataatattaaaaatgttgtgagtaacaccccactgtttgtacagtggc 37775769  T
Q  216 atcaaaagttc 226  Q
    |||||||||||    
T  37775770 atcaaaagttc 37775780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 115 - 240
Target Start/End: Original strand, 49375966 - 49376092
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttt-tggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    |||||||||||  ||||||||||   ||||||||||| ||||||||||||||||||| ||| |||| |||  |||||||||||||||   ||||||| |     
T  49375966 ggaaaattctacggtgaagtcatgagaatgactttttctggtgaagttaacattatagcatcaaaagtgtcgtgagtaacaccccactgcttgtacagtg 49376065  T
Q  214 acatcaaaagttcagtcattatagtat 240  Q
     |||||||||||||||| | |||||||    
T  49376066 gcatcaaaagttcagtcttcatagtat 49376092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 240
Target Start/End: Complemental strand, 28003197 - 28003072
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||||||   |||||||||| ||||||||| |||| |||| ||| |||| |||| | ||||  || ||||  |||||||| | |    
T  28003197 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagtcaacactatagcatcaaaagtgtagtcagtagtactccactgtttgtacagtga 28003098  T
Q  215 catcaaaagttcagtcattatagtat 240  Q
    |||||||||||||||||| |||||||    
T  28003097 catcaaaagttcagtcatcatagtat 28003072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 113 - 230
Target Start/End: Complemental strand, 30002837 - 30002720
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||| ||||| ||||||||||  |||||| |||| |||||||||||||| | || ||| |||| |||  ||||||||||| |||  |||||||| |    
T  30002837 aaggaaaactctatggtgaagtcattaaaatgatttttctggtgaagttaacactgtagcatcaaaagtgttgtgagtaacacctcactgtttgtacagt 30002738  T
Q  213 tacatcaaaagttcagtc 230  Q
     |||||||||||||||||    
T  30002737 gacatcaaaagttcagtc 30002720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 6864061 - 6864160
Alignment:
Q  141 aatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtcattatagtat 240  Q
    |||||||||||||||||||||| || |||||||| |||||| |||||| ||||| || ||  ||||||||||  |||||||||| ||||| | |||||||    
T  6864061 aatgacttttttggtgaagttatcactataacatcaaaaatttaatgaataacatccaactttttgtacaatagcatcaaaagtccagtcctcatagtat 6864160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 115 - 230
Target Start/End: Original strand, 7703517 - 7703632
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    ||||||||||||  | |||||||   |||||||||| |||||||||||||| |||||||| |||| |||  | |||||||||||||  |||||||  | |    
T  7703517 ggaaaattctatgttaaagtcatgagaatgacttttctggtgaagttaacactataacatcaaaagtgttgtcagtaacaccccactgtttgtacggtga 7703616  T
Q  215 catcaaaagttcagtc 230  Q
    ||||||||||||||||    
T  7703617 catcaaaagttcagtc 7703632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 47253751 - 47253873
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||||||| ||||||||||   ||||||||||||||||||||||||| |||| ||| |||| |||  |||||||||||| |   ||| |||| | |||    
T  47253751 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactatatcatcaaaagtgttgtgagtaacaccc-attgtttatacagtgaca 47253849  T
Q  217 tcaaaagttcagtcattatagtat 240  Q
    |||||||||||||| | |||||||    
T  47253850 tcaaaagttcagtcctcatagtat 47253873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 230
Target Start/End: Original strand, 4597994 - 4598107
Alignment:
Q  116 gaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattac 215  Q
    ||||||| ||| ||||||||||   |||||||||| |||||||||||||| ||||||||  ||| |||  |||||||||||||||  |||||||| |  |    
T  4597994 gaaaattttatggtgaagtcattagaatgacttttctggtgaagttaacactataacat-caaagtgttgtgagtaacaccccactgtttgtacagtggc 4598092  T
Q  216 atcaaaagttcagtc 230  Q
    |||||||||||||||    
T  4598093 atcaaaagttcagtc 4598107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 227
Target Start/End: Original strand, 37287732 - 37287846
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgactttttt-ggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    ||||||||||||| ||||||| ||   |||||||||||| ||| ||||||||| |||||||| |||| |||  |||||||||||||||  |||||||| |    
T  37287732 aggaaaattctatggtgaagtaatgagaatgactttttttggtaaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtacagt 37287831  T
Q  213 tacatcaaaagttca 227  Q
      |||||||||||||    
T  37287832 ggcatcaaaagttca 37287846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 117 - 230
Target Start/End: Complemental strand, 34948306 - 34948193
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||| ||| ||||||||||   |||||||||| ||| |||||||||| |||||||| |||| |||  |||||||||||||||  |||||| | |  ||    
T  34948306 aaaattttatggtgaagtcatgagaatgacttttctggcgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtaaagtggca 34948207  T
Q  217 tcaaaagttcagtc 230  Q
    ||||||||||||||    
T  34948206 tcaaaagttcagtc 34948193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 113 - 230
Target Start/End: Original strand, 38011852 - 38011969
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| ||||| ||||   |||||||||| ||||||||| |||| |||||||| |||| |||| ||| || ||||||||  |||||||  |    
T  38011852 aaggaaaattctatggtgaaatcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgaatagcaccccactgtttgtacggt 38011951  T
Q  213 tacatcaaaagttcagtc 230  Q
      ||||||||||||||||    
T  38011952 gccatcaaaagttcagtc 38011969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 230
Target Start/End: Complemental strand, 35025800 - 35025684
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    |||||||||||||  |||||||||  |||||| |||| ||||||||| |||| |||| ||| |||| |||| |||||| ||||||||  ||| |||  |     
T  35025800 aggaaaattctatgctgaagtcatgaaaatgatttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcaccccactgtttatacgttg 35025701  T
Q  214 acatcaaaagttcagtc 230  Q
    |||||||||||||||||    
T  35025700 acatcaaaagttcagtc 35025684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 51204580 - 51204628
Alignment:
Q  116 gaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaac 164  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||||||    
T  51204580 gaaaattctatggtgaagtcataaaaatgacttttctggtgaagttaac 51204628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 230
Target Start/End: Complemental strand, 55241315 - 55241200
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||||||   |||||||||| | |||||||||| | ||||  || |||| |||   ||||||||||||||  |||||||| |      
T  55241315 ggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaatactatattatcaaaattgttgcgagtaacaccccactgtttgtacagtgg 55241216  T
Q  215 catcaaaagttcagtc 230  Q
    ||||||||||||||||    
T  55241215 catcaaaagttcagtc 55241200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 17272009 - 17272075
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaa 179  Q
    |||||||||||||| |||||||| |   |||||||||| |||||||||||||| |||||||| ||||    
T  17272009 aaggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaa 17272075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 46888343 - 46888253
Alignment:
Q  140 aaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtc 230  Q
    |||| |||||| || ||||||||| | |||||||| |||| |||| ||||||| ||||||| |||||||||    ||||||||||||||||    
T  46888343 aaataacttttctgatgaagttaatactataacatcaaaattgtagtgagtaataccccactatttgtacagcggcatcaaaagttcagtc 46888253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 42063001 - 42063050
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagtta 162  Q
    |||| ||||||||| |||||||||| ||| ||||||||||||||||||||    
T  42063001 aagggaaattctatggtgaagtcattcaattgacttttttggtgaagtta 42063050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 47028103 - 47028147
Alignment:
Q  118 aaattctatagtgaagtcatacaaatgacttttttggtgaagtta 162  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||    
T  47028103 aaattctatggtgaagtcattcaattgacttttttggtgaagtta 47028147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 47073707 - 47073656
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaac 164  Q
    |||||||||||||| || |||||||   ||||||||||||||||||||||||    
T  47073707 aaggaaaattctatggtaaagtcatgataatgacttttttggtgaagttaac 47073656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 2704510 - 2704560
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaa 163  Q
    |||||||||| ||| ||||||||||  ||||||||||| ||||||||||||    
T  2704510 aaggaaaattttatggtgaagtcatgaaaatgacttttctggtgaagttaa 2704560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 32579470 - 32579528
Alignment:
Q  141 aatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacacccca 199  Q
    |||||||||| ||||||||| ||||||||||||| |||| || | |||||| |||||||    
T  32579470 aatgacttttctggtgaagtcaacattataacatcaaaagtgcagtgagtagcacccca 32579528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 38812310 - 38812260
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaa 163  Q
    |||||||||||||| ||||||||||   |||||||||| ||||||||||||    
T  38812310 aaggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaa 38812260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 23761114 - 23761187
Alignment:
Q  157 aagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtc 230  Q
    ||||||||| |||||||| |||| |||  ||||||||||| |||  |||||| | | |||||||||||||||||    
T  23761114 aagttaacactataacatcaaaagtgttgtgagtaacacctcactgtttgtatagtgacatcaaaagttcagtc 23761187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 5048174 - 5048062
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    ||||||||||| |||||| ||   ||||| |||| ||||||||| |||  |||||||| |||| |||| ||||||  ||| |||  ||||||| || | |    
T  5048174 aaaattctataatgaagttatgagaatgatttttctggtgaagtcaactctataacatcaaaagtgtagtgagtaggaccacactgtttgtacgatgata 5048075  T
Q  217 tcaaaagttcagt 229  Q
    |||||||||||||    
T  5048074 tcaaaagttcagt 5048062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 230
Target Start/End: Original strand, 32592096 - 32592208
Alignment:
Q  118 aaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacat 217  Q
    ||||| ||| ||||||||||   ||||||||||||| ||||||||||| || |  || |||| |||   ||||||||| ||||  |||||| | | ||||    
T  32592096 aaattttattgtgaagtcattataatgacttttttgatgaagttaacactacagtatcaaaagtgttgagagtaacactccactgtttgtatagtgacat 32592195  T
Q  218 caaaagttcagtc 230  Q
    |||||||||||||    
T  32592196 caaaagttcagtc 32592208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 240
Target Start/End: Original strand, 50764762 - 50764855
Alignment:
Q  145 acttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtcattatagtat 240  Q
    ||||||||| ||||||||||| ||  |||| |||| |||  |||||||||||||||  |||||||  | |||||||||||||| || | |||||||    
T  50764762 acttttttgatgaagttaacacta--acatcaaaagtgttgtgagtaacaccccactgtttgtacggtgacatcaaaagttcaatcctcatagtat 50764855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 52516599 - 52516655
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataaca 173  Q
    |||||| ||| ||||||||||   |||||||||| |||||||||||||| |||||||    
T  52516599 aaaattttatggtgaagtcatgagaatgacttttatggtgaagttaacactataaca 52516655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 1e-38; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 115 - 240
Target Start/End: Original strand, 37905709 - 37905833
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||| ||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||| |    
T  37905709 ggaaaattctatggtgaagttataaaaatga-ttttttggtgaagttaacactataacataaaaaatgtaacgagtaacaccccaccgtttgtacaatga 37905807  T
Q  215 catcaaaagttcagtcattatagtat 240  Q
    |||||||||||||||| | |||||||    
T  37905808 catcaaaagttcagtcctcatagtat 37905833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 115 - 228
Target Start/End: Original strand, 35958909 - 35959022
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||  || ||||||||||||||||||||||| ||||||||||  |||||||||| |    
T  35958909 ggaaaattctatgatgaagtcataaaaatgacttttttggtgaagttgccactataacataaaaaatgtaatgagcaacaccccactgtttgtacaatga 35959008  T
Q  215 catcaaaagttcag 228  Q
    ||| ||||||||||    
T  35959009 cattaaaagttcag 35959022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 114 - 228
Target Start/End: Complemental strand, 11366585 - 11366471
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| ||||| |||||  |||||||||||||||||| |||||| |||||||| ||||||||||||||||||| | ||| ||||||| |||     
T  11366585 aggaaaattctatggtgaaatcataagaatgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatctcactatttgtataatg 11366486  T
Q  214 acatcaaaagttcag 228  Q
    |||||||||||||||    
T  11366485 acatcaaaagttcag 11366471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 115 - 240
Target Start/End: Complemental strand, 33551189 - 33551064
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||  ||||||||||   |||||||||||| |||||||||||| |||||||| ||||||||| |||||||||||||||  |||||||||| |    
T  33551189 ggaaaattctacggtgaagtcatgagaatgacttttttagtgaagttaacactataacatcaaaaatgtagtgagtaacaccccactgtttgtacaatga 33551090  T
Q  215 catcaaaagttcagtcattatagtat 240  Q
    |||||||||||| ||| | |||||||    
T  33551089 catcaaaagttcggtcttcatagtat 33551064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 114 - 226
Target Start/End: Complemental strand, 17071941 - 17071829
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||||||||| |||||||  ||||||||| | ||||||| | ||  |||||||||||     
T  17071941 aggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaacactataacaacaaaaatgtagtaagtaacatctcattatttgtacaatg 17071842  T
Q  214 acatcaaaagttc 226  Q
    |||||||||||||    
T  17071841 acatcaaaagttc 17071829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 43648415 - 43648323
Alignment:
Q  148 tttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtcattatagtat 240  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||| |||  |||||| ||| ||||||||||||||||||| |||||||    
T  43648415 tttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacctcactgtttgtataatgacatcaaaagttcagtcatcatagtat 43648323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 230
Target Start/End: Original strand, 4166920 - 4167037
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| |||||||||   ||||||||||| |||||||||||||||||||  || |||||| |  |||||||||||||||  ||||||||||    
T  4166920 aaggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacattatagtatcaaaaatattgtgagtaacaccccactgtttgtacaat 4167019  T
Q  213 tacatcaaaagttcagtc 230  Q
      ||||||||||||||||    
T  4167020 ggcatcaaaagttcagtc 4167037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 113 - 225
Target Start/End: Complemental strand, 19289523 - 19289416
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| |||||||||     |||||||||||| ||||||||||| |||||||| |||||| |||||||||||||||||   ||||||||||    
T  19289523 aaggaaaattctatggtgaagtca-----atgacttttttgatgaagttaacactataacatcaaaaatataatgagtaacaccccattgtttgtacaat 19289429  T
Q  213 tacatcaaaagtt 225  Q
     ||||||||||||    
T  19289428 gacatcaaaagtt 19289416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 113 - 240
Target Start/End: Complemental strand, 29242343 - 29242216
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| ||||||||||  |||||  ||||||||||||||||| | ||||||||||||||| || || ||||||||||||  |||||||| |    
T  29242343 aaggaaaattctatggtgaagtcatgaaaatggtttttttggtgaagttaaaactataacataaaaaatatagtgcgtaacaccccactgtttgtacagt 29242244  T
Q  213 tacatcaaaagttcagtcattatagtat 240  Q
       ||||||||||||||| | |||||||    
T  29242243 ggtatcaaaagttcagtcttcatagtat 29242216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 230
Target Start/End: Original strand, 13711465 - 13711579
Alignment:
Q  116 gaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattac 215  Q
    ||||||||||| ||||||||||   |||||||||| ||||||||||||||||||| ||| |||| |||  |||||||||||||||  |||||||| | ||    
T  13711465 gaaaattctatggtgaagtcatcagaatgacttttctggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccccacagtttgtacagtgac 13711564  T
Q  216 atcaaaagttcagtc 230  Q
    |||||||||| ||||    
T  13711565 atcaaaagtttagtc 13711579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 224
Target Start/End: Complemental strand, 17054300 - 17054190
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||||||| | |||||||| ||||||||| | ||||||| | ||   ||||||||||     
T  17054300 aggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaatactataacatcaaaaatgtagtaagtaacatctcattgtttgtacaatg 17054201  T
Q  214 acatcaaaagt 224  Q
    |||||||||||    
T  17054200 acatcaaaagt 17054190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 26357577 - 26357691
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||| ||| ||||||||||  ||||||||||| || ||||||||||| |||||||| |||| |||| ||||||||| |||||  |||||||| | |    
T  26357577 ggaaaattttatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtgagtaacatcccactgtttgtacagtga 26357676  T
Q  215 catcaaaagttcagt 229  Q
    |||||||||||||||    
T  26357677 catcaaaagttcagt 26357691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 113 - 240
Target Start/End: Complemental strand, 2325575 - 2325448
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| ||||||| ||   |||||||||| | |||||||||||| |||||||| | ||||||| ||||||||||||||   |||||||| |    
T  2325575 aaggaaaattctatggtgaagttatgtgaatgacttttctcgtgaagttaacaatataacatcataaatgtattgagtaacaccccattgtttgtacact 2325476  T
Q  213 tacatcaaaagttcagtcattatagtat 240  Q
      |||||||||||||||| | |||||||    
T  2325475 ggcatcaaaagttcagtcctcatagtat 2325448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 115 - 230
Target Start/End: Original strand, 19313852 - 19313967
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||||||   |||||||||| ||||||||||||||||||| ||| |||| |||  |||||||||||  || |||| |||| | |    
T  19313852 ggaaaattctatggtgaagtcattagaatgacttttctggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccttactatttatacagtga 19313951  T
Q  215 catcaaaagttcagtc 230  Q
    ||||||||||||||||    
T  19313952 catcaaaagttcagtc 19313967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 114 - 244
Target Start/End: Complemental strand, 4264281 - 4264151
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| ||||||||||   |||||||||| |||| ||||||||| |||| ||| |||| |||  ||||||||| |||||  |||||||| |     
T  4264281 aggaaaattctatggtgaagtcatcataatgacttttctggtaaagttaacactatagcatcaaaagtgttgtgagtaacatcccactgtttgtacagtg 4264182  T
Q  214 acatcaaaagttcagtcattatagtattatc 244  Q
    |||||||||||||||||   |||||||||||    
T  4264181 acatcaaaagttcagtctccatagtattatc 4264151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 115 - 230
Target Start/End: Original strand, 33902068 - 33902181
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    ||||||||||||  ||||||| |   |||||||||| |||||||||||||| ||  |||||||||||||| ||||||| |||||||  |||||| ||| |    
T  33902068 ggaaaattctatgatgaagtcgttagaatgacttttctggtgaagttaacacta--acataaaaaatgtagtgagtaataccccactgtttgtaaaatga 33902165  T
Q  215 catcaaaagttcagtc 230  Q
    ||||||||||||||||    
T  33902166 catcaaaagttcagtc 33902181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 115 - 240
Target Start/End: Original strand, 4478368 - 4478494
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaa-tgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    |||||||||||||||||||||||| ||| |||  |||||||||||||||||| |||||||| |||| |||  |||||||||| |||   |||||||| |     
T  4478368 ggaaaattctatagtgaagtcatagaaaatgatatttttggtgaagttaacactataacatcaaaagtgttgtgagtaacactccattgtttgtacagtg 4478467  T
Q  214 acatcaaaagttcagtcattatagtat 240  Q
     ||||||||||| |||| | |||||||    
T  4478468 gcatcaaaagtttagtcctcatagtat 4478494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 41960881 - 41960947
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaa 179  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||||||| ||||    
T  41960881 aaggaaaattctatggtgaagtcatagaaatgacttttttgatgaagttaacactataacatcaaaa 41960947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 114 - 230
Target Start/End: Complemental strand, 27350143 - 27350026
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgac-ttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    ||||||||| ||| ||||||||||  |||| |  ||||||||||||||||||| |||| ||| ||||||||  ||||||||||| |||  |||||||| |    
T  27350143 aggaaaattttatggtgaagtcattaaaataatattttttggtgaagttaacactatagcatcaaaaatgttgtgagtaacaccacactgtttgtacagt 27350044  T
Q  213 tacatcaaaagttcagtc 230  Q
     |||||||||||||||||    
T  27350043 gacatcaaaagttcagtc 27350026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 230
Target Start/End: Complemental strand, 33660569 - 33660456
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||||||| ||||||||||  ||||||||||| | || ||||||||| |||||||| |||| |||  |||||||||||| ||  |||||||| |  ||    
T  33660569 aaaattctatggtgaagtcattaaaatgacttttctagttaagttaacactataacatcaaaagtgttgtgagtaacacccaactgtttgtacagtggca 33660470  T
Q  217 tcaaaagttcagtc 230  Q
    ||||||||||||||    
T  33660469 tcaaaagttcagtc 33660456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 230
Target Start/End: Complemental strand, 43771039 - 43770927
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||||||| ||||||||||   ||||| ||||||||||||||||||| |||||||| |||| |||  |||||||||||||||  ||| |||| |  ||    
T  43771039 aaaattctatggtgaagtcattagaatga-ttttttggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttatacagtggca 43770941  T
Q  217 tcaaaagttcagtc 230  Q
    ||||||||||||||    
T  43770940 tcaaaagttcagtc 43770927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 200
Target Start/End: Complemental strand, 18494478 - 18494386
Alignment:
Q  108 attacaaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccac 200  Q
    |||| |||||||||||| | ||||||||||  ||||||||||| |||||||||||||| |||| ||| |||| |||  |||||||||||||||    
T  18494478 attaaaaggaaaattctgtggtgaagtcatgaaaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccac 18494386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 3176941 - 3177064
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||||||| ||||||| |   ||||||||||| || ||||||||| | ||||| || ||||||||  |||||||||| | ||  |||||||||| |||    
T  3176941 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaatactataatatcaaaaatgttttgagtaacacgcaactgtttgtacaatgaca 3177040  T
Q  217 tcaaaagttcagtcattatagtat 240  Q
    |||||||||||||| | |||||||    
T  3177041 tcaaaagttcagtcctcatagtat 3177064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 230
Target Start/End: Complemental strand, 31570940 - 31570822
Alignment:
Q  112 caaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaa 211  Q
    ||||||||||||||| ||||||| ||   ||| |||||| ||||||| |||||| |||||||| |||| |||  | ||||||||||||| |||| || |     
T  31570940 caaggaaaattctatggtgaagttatgagaataacttttctggtgaaattaacactataacattaaaagtgttgtaagtaacaccccactatttttatag 31570841  T
Q  212 ttacatcaaaagttcagtc 230  Q
    | |||||||||||||||||    
T  31570840 tgacatcaaaagttcagtc 31570822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 4763628 - 4763745
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacat---tataacataaaaaatgtaatgagtaacaccccaccatttgtacaa 211  Q
    ||||||||||||  |||||||||  ||||||||||| || |||||||||||    |||| ||  |||| |||| |||||||||||||||  ||||||||     
T  4763628 ggaaaattctatgatgaagtcatgaaaatgacttttctgatgaagttaacaacactatatcaacaaaactgtagtgagtaacaccccactgtttgtacag 4763727  T
Q  212 ttacatcaaaagttcagt 229  Q
    | ||||||||||||||||    
T  4763728 tgacatcaaaagttcagt 4763745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 36641988 - 36642111
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||||||| ||||||||||   |||||||||| ||||||| |||| | |||| ||| |||| |||   |||||||||| |||  |||||||| | |||    
T  36641988 aaaattctatggtgaagtcatgagaatgacttttctggtgaaattaatactatagcatcaaaagtgttgcgagtaacacctcactgtttgtacagtgaca 36642087  T
Q  217 tcaaaagttcagtcattatagtat 240  Q
    |||||||||||||| | |||||||    
T  36642088 tcaaaagttcagtcctcatagtat 36642111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 230
Target Start/End: Original strand, 5881533 - 5881654
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacat-----aaaaaatgtaatgagtaacaccccaccatttgta 208  Q
    ||||||||| ||| ||||||||||  ||||||||||| |||||||||| | ||||||||||      |||| |||  |||||||||||||||  ||||||    
T  5881533 aggaaaattttattgtgaagtcattaaaatgacttttctggtgaagttgatattataacatcaaaacaaaagtgttgtgagtaacaccccactgtttgta 5881632  T
Q  209 caattacatcaaaagttcagtc 230  Q
    || | |||||||||||| ||||    
T  5881633 cagtgacatcaaaagttgagtc 5881654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 19424832 - 19424747
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacacccca 199  Q
    ||||||||| ||| ||||||||||   |||| ||||| |||||||||||||| |||||||| |||| |||  ||||||||||||||    
T  19424832 aggaaaattttatggtgaagtcatgagaatggcttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacacccca 19424747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 240
Target Start/End: Complemental strand, 39167569 - 39167441
Alignment:
Q  112 caaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaa 211  Q
    ||||||||||| ||| |||||||||    ||||| ||||||| |||||||||||  |||  || |||| | |  ||||||||||| |||  |||||||||    
T  39167569 caaggaaaattttatggtgaagtcacgagaatgatttttttgatgaagttaacagaatagtatcaaaagtattgtgagtaacacctcactgtttgtacaa 39167470  T
Q  212 ttacatcaaaagttcagtcattatagtat 240  Q
    | ||||||||||||||||| | |||||||    
T  39167469 tgacatcaaaagttcagtcctcatagtat 39167441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 240
Target Start/End: Complemental strand, 41464051 - 41463928
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||||||| |||||||| |   |||||| |||||||||||||||| | ||||| || |||| |||  ||||||||||| |||  |||||||| |  ||    
T  41464051 aaaattctatggtgaagtcgtgagaatgacatttttggtgaagttaatactataaaatcaaaagtgttgtgagtaacacctcactgtttgtacagtggca 41463952  T
Q  217 tcaaaagttcagtcattatagtat 240  Q
    ||||||||||| || | |||||||    
T  41463951 tcaaaagttcaatcctcatagtat 41463928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 34441971 - 34441921
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaa 163  Q
    |||||||||||||| ||||||||||  |||||||||||||||| |||||||    
T  34441971 aaggaaaattctatggtgaagtcatgaaaatgacttttttggtaaagttaa 34441921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 41465509 - 41465591
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccc 197  Q
    |||||||||||| ||||||||||   |||||||||| |||||||||||||| |||| ||| |||  |||| |||||| |||||    
T  41465509 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaggtgtagtgagtagcaccc 41465591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 33709403 - 33709320
Alignment:
Q  147 ttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtc 230  Q
    |||| |||||||||||||| |||||||| |||| |||   ||||||||| ||||  || ||||| | |||||||||||||||||    
T  33709403 ttttatggtgaagttaacactataacatcaaaagtgttgcgagtaacactccactgttagtacagtgacatcaaaagttcagtc 33709320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 163
Target Start/End: Original strand, 42005390 - 42005437
Alignment:
Q  116 gaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaa 163  Q
    ||||||||||| ||||||||||  |||||| |||||||||||||||||    
T  42005390 gaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttaa 42005437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 169
Target Start/End: Original strand, 31861895 - 31861949
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattat 169  Q
    |||||||||||| ||||||| ||   ||||||||||||||||||||||| |||||    
T  31861895 ggaaaattctatggtgaagttatgagaatgacttttttggtgaagttaatattat 31861949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 41643874 - 41643920
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaa 163  Q
    |||||||||| ||||||||||   |||||||||||||||||||||||    
T  41643874 aaaattctatggtgaagtcatgataatgacttttttggtgaagttaa 41643920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 18514819 - 18514771
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaa 163  Q
    |||||||| ||||||||||||||   ||||||||||||| |||||||||    
T  18514819 ggaaaattttatagtgaagtcatgagaatgacttttttgatgaagttaa 18514771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 43446511 - 43446463
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagtta 162  Q
    ||||||||||||| ||||||||||   ||||||||||| ||||||||||    
T  43446511 aggaaaattctatggtgaagtcatgagaatgactttttcggtgaagtta 43446463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 6e-37; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 114 - 240
Target Start/End: Complemental strand, 1150297 - 1150171
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||||||||  |||||||| ||||||||||||||||||| |||||  |||||||||      
T  1150297 aggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacgctataacatcaaaaatgtaatgagtaacatcccactgtttgtacaacg 1150198  T
Q  214 acatcaaaagttcagtcattatagtat 240  Q
    ||||||||||||||||||| |||||||    
T  1150197 acatcaaaagttcagtcatcatagtat 1150171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 115 - 240
Target Start/End: Complemental strand, 10555393 - 10555268
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||  ||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||  |||||||||| |    
T  10555393 ggaaaattctacggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacactccactgtttgtacaatga 10555294  T
Q  215 catcaaaagttcagtcattatagtat 240  Q
    ||||||||||||| || | |||||||    
T  10555293 catcaaaagttcaatcctcatagtat 10555268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 114 - 228
Target Start/End: Complemental strand, 8803998 - 8803888
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| |||||||||||    ||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||| ||||||| |||     
T  8803998 aggaaaattctatggtgaagtcata----tgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacactccactatttgtagaatg 8803903  T
Q  214 acatcaaaagttcag 228  Q
    |||||||||||||||    
T  8803902 acatcaaaagttcag 8803888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 115 - 240
Target Start/End: Complemental strand, 23854622 - 23854497
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||| ||||  ||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||| |||| |    
T  23854622 ggaaaagtctacggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacccaactgtttgtgcaatga 23854523  T
Q  215 catcaaaagttcagtcattatagtat 240  Q
    |||||||||||||||| | |||||||    
T  23854522 catcaaaagttcagtcctcatagtat 23854497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 228
Target Start/End: Complemental strand, 37970704 - 37970597
Alignment:
Q  121 ttctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaa 220  Q
    |||||| ||||||||||   ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||  ||||||||||  ||||||    
T  37970704 ttctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtacaatgccatcaa 37970605  T
Q  221 aagttcag 228  Q
    ||||||||    
T  37970604 aagttcag 37970597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 114 - 228
Target Start/End: Complemental strand, 30654775 - 30654661
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||| ||| |||||||||||  | ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||  |||     
T  30654775 aggaaaattttatggtgaagtcataagagtgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccactgtttgttgaatg 30654676  T
Q  214 acatcaaaagttcag 228  Q
    |||||||||||||||    
T  30654675 acatcaaaagttcag 30654661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 113 - 240
Target Start/End: Original strand, 1204924 - 1205051
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||| ||  ||||||||||   |||||||||| |||||||||||||| |||||||||||||||||| ||||||||||  |||  ||||||||||    
T  1204924 aaggaaaattttacggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgtagtgagtaacacatcactgtttgtacaat 1205023  T
Q  213 tacatcaaaagttcagtcattatagtat 240  Q
     ||||||||||||||||| | |||||||    
T  1205024 gacatcaaaagttcagtcctcatagtat 1205051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 113 - 240
Target Start/End: Complemental strand, 43643788 - 43643661
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| ||||||||||   ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| | ||  ||||||||||    
T  43643788 aaggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaacactctactgtttgtacaat 43643689  T
Q  213 tacatcaaaagttcagtcattatagtat 240  Q
     ||||| |||||||| || | |||||||    
T  43643688 gacatccaaagttcaatcttcatagtat 43643661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 113 - 230
Target Start/End: Original strand, 9864145 - 9864262
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    ||||||||||||||| ||||||||   ||||||||||||||||||| |||||| ||||  || ||||||||  |||||||||||||||  ||||||||||    
T  9864145 aaggaaaattctataatgaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacaccccactgtttgtacaat 9864244  T
Q  213 tacatcaaaagttcagtc 230  Q
     |||||||||||||||||    
T  9864245 gacatcaaaagttcagtc 9864262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 113 - 230
Target Start/End: Complemental strand, 36695159 - 36695042
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| |||||||||   ||||||||||| || ||||||||||| ||||| || ||||||||  |||||||||||||||  ||||||||||    
T  36695159 aaggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttgtgagtaacaccccactgtttgtacaat 36695060  T
Q  213 tacatcaaaagttcagtc 230  Q
     |||||||||||||||||    
T  36695059 gacatcaaaagttcagtc 36695042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 116 - 240
Target Start/End: Complemental strand, 31934076 - 31933952
Alignment:
Q  116 gaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattac 215  Q
    ||||||||||  ||||||| ||   ||||| ||||||||||||||||||| ||| | || |||||| ||||||||||||||||||  ||| |||||| ||    
T  31934076 gaaaattctaacgtgaagttatgagaatgatttttttggtgaagttaacactatgatatcaaaaatataatgagtaacaccccactctttatacaatgac 31933977  T
Q  216 atcaaaagttcagtcattatagtat 240  Q
    |||||||||||||||||||||||||    
T  31933976 atcaaaagttcagtcattatagtat 31933952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 115 - 230
Target Start/End: Complemental strand, 6098709 - 6098594
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||||||  |||| ||||||||||||||||||| | |||| ||| |||||| || |||||||||||||||  |||||||| | |    
T  6098709 ggaaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactatagcatcaaaaatatagtgagtaacaccccactgtttgtacagtga 6098610  T
Q  215 catcaaaagttcagtc 230  Q
    ||||||||||||||||    
T  6098609 catcaaaagttcagtc 6098594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 113 - 230
Target Start/End: Original strand, 40862416 - 40862534
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacat-aaaaaatgtaatgagtaacaccccaccatttgtacaa 211  Q
    ||||||||||||||||||||||||   |||| |||||| |||||||||||||| ||||| || |||||||||  |||||||||||||||  |||||||||    
T  40862416 aaggaaaattctatagtgaagtcacgaaaataacttttctggtgaagttaacactataatatcaaaaaatgttgtgagtaacaccccactgtttgtacaa 40862515  T
Q  212 ttacatcaaaagttcagtc 230  Q
    |  ||||||||||||||||    
T  40862516 tggcatcaaaagttcagtc 40862534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 115 - 240
Target Start/End: Original strand, 12876108 - 12876233
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| || ||||||   ||||||||||| || ||||||||||| ||||| |||||||||||  |||||||||||| ||  |||||||||| |    
T  12876108 ggaaaattctatggttaagtcacgaaaatgacttttctgatgaagttaacactataatataaaaaatgttgtgagtaacacccaactgtttgtacaatga 12876207  T
Q  215 catcaaaagttcagtcattatagtat 240  Q
    |||||||||||||||| | |||||||    
T  12876208 catcaaaagttcagtcctcatagtat 12876233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 115 - 244
Target Start/End: Original strand, 13307622 - 13307751
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||||||   ||||| |||| |||||||||||||| |||||||| |||| |||  ||||||||||| ||| ||||||||| | |    
T  13307622 ggaaaattctatggtgaagtcatgagaatgatttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacacctcactatttgtacagtga 13307721  T
Q  215 catcaaaagttcagtcattatagtattatc 244  Q
    ||||||||||||||||   |||||||||||    
T  13307722 catcaaaagttcagtccccatagtattatc 13307751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 111 - 240
Target Start/End: Original strand, 16222858 - 16222987
Alignment:
Q  111 acaaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtaca 210  Q
    |||||||||||||||  ||||| ||||   |||||||||| ||||||| |||||| ||||||||||||||| || ||||||   ||||||  ||||||||    
T  16222858 acaaggaaaattctacggtgaaatcatgagaatgacttttctggtgaatttaacactataacataaaaaatatagtgagtagttccccacagtttgtaca 16222957  T
Q  211 attacatcaaaagttcagtcattatagtat 240  Q
    || ||||||||||||||||| | |||||||    
T  16222958 atgacatcaaaagttcagtcctcatagtat 16222987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 230
Target Start/End: Complemental strand, 16447067 - 16446951
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| ||||||||||  ||||||||||| || | ||||||||| |||||||| |||| |||| |||||||||||||||  |||||| |||     
T  16447067 aggaaaattctatggtgaagtcatgaaaatgacttttctgataaagttaacactataacatcaaaattgtagtgagtaacaccccactgtttgtataatg 16446968  T
Q  214 acatcaaaagttcagtc 230  Q
     ||||||||||| ||||    
T  16446967 gcatcaaaagtttagtc 16446951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 230
Target Start/End: Complemental strand, 34952223 - 34952107
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    |||||||||||||||| |||||||  ||||||||||| |||| ||||||||| |||| ||| |||| |||  ||||||||| |||||  |||||||| |     
T  34952223 aggaaaattctatagtaaagtcattaaaatgacttttctggtcaagttaacactatatcatcaaaagtgttgtgagtaacagcccactgtttgtacagtg 34952124  T
Q  214 acatcaaaagttcagtc 230  Q
    |||||||||||||||||    
T  34952123 acatcaaaagttcagtc 34952107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 113 - 232
Target Start/End: Original strand, 34894964 - 34895083
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| ||||||||||  ||||||||||| || ||||||||||| |||||||| || | |||| |||||||||| ||||  |||||| | |    
T  34894964 aaggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaacactgtagtgagtaacactccactgtttgtaaagt 34895063  T
Q  213 tacatcaaaagttcagtcat 232  Q
      ||||||||||||||||||    
T  34895064 ggcatcaaaagttcagtcat 34895083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 115 - 228
Target Start/End: Original strand, 41362517 - 41362627
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||| ||  ||||||||||||||||||||||||||   || ||| ||||||||| ||||||||||||||| ||||||| | | |    
T  41362517 ggaaaattctatggtgaagttatgaaaatgacttttttggtgaagttaaca--ctagcat-aaaaatgtagtgagtaacaccccactatttgtatagtga 41362613  T
Q  215 catcaaaagttcag 228  Q
    ||||||||||||||    
T  41362614 catcaaaagttcag 41362627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 38643969 - 38644092
Alignment:
Q  107 aattacaaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttg 206  Q
    ||||| |||||||||||||| ||||| ||||   ||||||||||||||| ||||||||| |||||||| |||| |||  |||||||||||||||  ||||    
T  38643969 aattagaaggaaaattctatggtgaaatcatgagaatgacttttttggtcaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttg 38644068  T
Q  207 tacaattacatcaaaagttcagtc 230  Q
    |  | |  ||||||||||||||||    
T  38644069 tctagtggcatcaaaagttcagtc 38644092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 114 - 240
Target Start/End: Complemental strand, 27083030 - 27082904
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| ||||||||||   | |||||||| |||||||||||||| |||| ||| |||| |||| |||||||||||||||  ||||| || |     
T  27083030 aggaaaattctatggtgaagtcatcagactgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacaccccactgtttgtgcagtg 27082931  T
Q  214 acatcaaaagttcagtcattatagtat 240  Q
     ||| |||||||||||| | |||||||    
T  27082930 gcattaaaagttcagtcctcatagtat 27082904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 230
Target Start/End: Original strand, 465843 - 465956
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||| ||| ||||||||||  ||||||||||| ||||||||||||||  ||||||| |||| |||  |||||||||||||||  |||||||| |  ||    
T  465843 aaaattttatggtgaagtcattaaaatgacttttgtggtgaagttaacacgataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtggca 465942  T
Q  217 tcaaaagttcagtc 230  Q
    |||||| |||||||    
T  465943 tcaaaaattcagtc 465956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 15009241 - 15009306
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaa 180  Q
    |||||||||||| |||||||||||  ||||||||||||||||||||||||| |||||||| |||||    
T  15009241 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaa 15009306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 141 - 230
Target Start/End: Original strand, 11727049 - 11727138
Alignment:
Q  141 aatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtc 230  Q
    ||||| ||||||||||||||||||| |||||||| |||| |||  | ||||||||||||| ||||||| | |  ||||||||||||||||    
T  11727049 aatgatttttttggtgaagttaacactataacatcaaaagtgttgtaagtaacaccccactatttgtatagtggcatcaaaagttcagtc 11727138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 240
Target Start/End: Complemental strand, 5300137 - 5300012
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||||||   ||||||||||||  ||||||||||| |||| ||| |||| |||  | |||| ||| | ||  |||||||| |      
T  5300137 ggaaaattctatggtgaagtcatgagaatgacttttttaatgaagttaacactatagcatcaaaagtgttgtaagtagcactctactgtttgtacagtgg 5300038  T
Q  215 catcaaaagttcagtcattatagtat 240  Q
    |||||||||||||||| |||||||||    
T  5300037 catcaaaagttcagtccttatagtat 5300012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 1149762 - 1149698
Alignment:
Q  176 aaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtcattatagtat 240  Q
    ||||||||||||||||||| |||||  |||||||||| ||||||||||||| ||| | |||||||    
T  1149762 aaaaatgtaatgagtaacaacccactgtttgtacaatgacatcaaaagttctgtcctcatagtat 1149698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 7891137 - 7891073
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaat 181  Q
    |||||||||| ||||||||||   |||||||||||| |||||||||||| |||||||| ||||||    
T  7891137 aaaattctatggtgaagtcatgagaatgactttttttgtgaagttaacactataacatcaaaaat 7891073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 200
Target Start/End: Complemental strand, 24823437 - 24823378
Alignment:
Q  141 aatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccac 200  Q
    ||||||||||||||||||||||||| ||||| || |||| ||| | | ||||||||||||    
T  24823437 aatgacttttttggtgaagttaacactataatatcaaaagtgttaagtgtaacaccccac 24823378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 4108962 - 4108912
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaa 163  Q
    |||||||||| ||| ||||||||||  |||||||||||||||| |||||||    
T  4108962 aaggaaaattttatggtgaagtcatgaaaatgacttttttggtaaagttaa 4108912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 23176805 - 23176763
Alignment:
Q  121 ttctatagtgaagtcatacaaatgacttttttggtgaagttaa 163  Q
    |||||| ||||||||||  ||||||||||||||||||||||||    
T  23176805 ttctatggtgaagtcatgaaaatgacttttttggtgaagttaa 23176763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 35736030 - 35735984
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaa 163  Q
    |||||||||| ||||||||||   |||||||||||||||||||||||    
T  35736030 aaaattctatggtgaagtcattagaatgacttttttggtgaagttaa 35735984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 239
Target Start/End: Complemental strand, 4133199 - 4133077
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||| ||| || |||||||   |||||||||||||||||||||||||   || |||||||||  || ||||||| |||  ||  |||||||| |      
T  4133199 ggaaaattttatggtcaagtcatcagaatgacttttttggtgaagttaaca--ctagcataaaaaagatagtgagtaatacctgactgtttgtacagtgg 4133102  T
Q  215 catcaaaagttcagtcattatagta 239  Q
    |||||||||||||||| | ||||||    
T  4133101 catcaaaagttcagtcctcatagta 4133077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 35459888 - 35459823
Alignment:
Q  116 gaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaat 181  Q
    ||||||||||| ||||||||||   |||||||||||| || ||||||| | ||||| |||||||||    
T  35459888 gaaaattctatggtgaagtcatgagaatgacttttttcgtaaagttaatactataatataaaaaat 35459823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 41191070 - 41191018
Alignment:
Q  111 acaaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaac 164  Q
    |||||||||||| ||| ||||||| ||  |||||||||||||||||||||||||    
T  41191070 acaaggaaaatt-tatggtgaagttatgaaaatgacttttttggtgaagttaac 41191018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 44869495 - 44869559
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaa 179  Q
    |||||||||||  ||||| | |||  ||| ||||||||||||||||||||| |||||||| ||||    
T  44869495 ggaaaattctacggtgaaattataagaataacttttttggtgaagttaacactataacattaaaa 44869559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 22255179 - 22255296
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacat-aaaaaatgtaatgagtaacaccccaccatttgtacaa 211  Q
    |||||||| ||||  ||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  22255179 aaggaaaactctacggtgaagtcataaaaataacttttttggtgaagttaacattataacatcaaaaaatgtaatgagtaacaccccaccgtttgtacaa 22255278  T
Q  212 ttacatcaaaagttcagt 229  Q
    |  |||||||||||||||    
T  22255279 tggcatcaaaagttcagt 22255296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 114 - 240
Target Start/End: Complemental strand, 17158209 - 17158081
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttg---gtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtaca 210  Q
    ||||||||||||| ||||||||||| |||||| ||||||    |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  17158209 aggaaaattctatggtgaagtcataaaaatgatttttttttttgtgaagttaacactataacataaaaaatgtaatgagtaacactccaccgtttgtaca 17158110  T
Q  211 attacatcaaaagttcagtcattatagtat 240  Q
    || ||||||||||||| |||||||||||||    
T  17158109 atgacatcaaaagttc-gtcattatagtat 17158081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 116 - 230
Target Start/End: Complemental strand, 31705785 - 31705671
Alignment:
Q  116 gaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattac 215  Q
    ||||||||||| ||||||||||| |||||| ||||||||||||||||||| |||||||| |||||||||| ||||||||||| ||| |||||||||| ||    
T  31705785 gaaaattctatggtgaagtcataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacaccctaccgtttgtacaatgac 31705686  T
Q  216 atcaaaagttcagtc 230  Q
    ||||||||| |||||    
T  31705685 atcaaaagtccagtc 31705671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 27172525 - 27172636
Alignment:
Q  1 tatatatttgattttggtgttttnnnnnnnntgtaattcttttttataagcaagagaatttcattagtgggaccataaagggtaaattagtcaaaacata 100  Q
    |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||| ||    
T  27172525 tatatatttgattttggtgttttaaaaaaaatgtaattcttttttataagcaagagaatttcattagtgggac--tatagggtaaattagtcaaaaccta 27172622  T
Q  101 atctataattacaa 114  Q
    ||||||||||||||    
T  27172623 atctataattacaa 27172636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 5112493 - 5112373
Alignment:
Q  110 tacaaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtac 209  Q
    ||||||||||||| ||| ||||||||||  |||||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||  |||||||    
T  5112493 tacaaggaaaattttatggtgaagtcatgaaaatgacttttttggtgaagttaatactataacataaaaaatatagtgagtaacaccccactgtttgtac 5112394  T
Q  210 aattacatcaaaagttcagtc 230  Q
    | |  ||||||||||||||||    
T  5112393 agtggcatcaaaagttcagtc 5112373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 115 - 240
Target Start/End: Original strand, 5829897 - 5830026
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataa----cataaaaaatgtaatgagtaacaccccaccatttgtaca 210  Q
    |||||||||||  |||||||| || |||||| |||||||||||||||||||||||||    |||||||||||||||||||||||||| ||| ||||||||    
T  5829897 ggaaaattctagggtgaagtcgtaaaaatgatttttttggtgaagttaacattataattaacataaaaaatgtaatgagtaacaccctaccgtttgtaca 5829996  T
Q  211 attacatcaaaagttcagtcattatagtat 240  Q
    || |||||||||||| |||| | |||||||    
T  5829997 atgacatcaaaagtttagtcctcatagtat 5830026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 117 - 230
Target Start/End: Complemental strand, 7209037 - 7208923
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgactttttt-ggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattac 215  Q
    |||||||||  ||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| || ||||||||||| ||| |||||||| | ||    
T  7209037 aaaattctacggtgaagtcataaaaatgactttttttggtgaagttaacattgtaacataaaaaatgcaacgagtaacaccctaccgtttgtacattgac 7208938  T
Q  216 atcaaaagttcagtc 230  Q
    |||||||||||||||    
T  7208937 atcaaaagttcagtc 7208923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 108 - 227
Target Start/End: Complemental strand, 22974264 - 22974145
Alignment:
Q  108 attacaaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgt 207  Q
    |||| |||||||||||||| ||||||| ||   ||||| ||||||||||||||||||| |||||||| ||||| ||||||||||||| |||||  |||||    
T  22974264 attaaaaggaaaattctatggtgaagttatgagaatgatttttttggtgaagttaacactataacatcaaaaaagtaatgagtaacatcccactgtttgt 22974165  T
Q  208 acaattacatcaaaagttca 227  Q
    ||||| ||||||||||||||    
T  22974164 acaataacatcaaaagttca 22974145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 115 - 230
Target Start/End: Original strand, 40133385 - 40133500
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| |||||||||   ||||||||||| |||||||||||||||||||  || ||||||||  ||||||||||||||| |||||||||||      
T  40133385 ggaaaattctatggtgaagtcacgaaaatgacttttgtggtgaagttaacattatagtatcaaaaatgttgtgagtaacaccccactatttgtacaatgg 40133484  T
Q  215 catcaaaagttcagtc 230  Q
    ||||||||||||||||    
T  40133485 catcaaaagttcagtc 40133500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 113 - 240
Target Start/End: Original strand, 24886100 - 24886229
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgactttt--ttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtaca 210  Q
    |||||||||| ||| ||||| ||||   ||||||||||  ||||||||||||| | |||||||| |||||||||||||||||||||||||  ||||||||    
T  24886100 aaggaaaattttatggtgaaatcatgagaatgacttttttttggtgaagttaatactataacatcaaaaatgtaatgagtaacaccccactgtttgtaca 24886199  T
Q  211 attacatcaaaagttcagtcattatagtat 240  Q
    || ||||||||||||||||| | |||||||    
T  24886200 atgacatcaaaagttcagtcctcatagtat 24886229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 113 - 230
Target Start/End: Original strand, 36860421 - 36860538
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| |||||||||   |||||| |||| |||||||||||||| ||||  |||||||||||  |||||||||||||||  ||||||||||    
T  36860421 aaggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactatagtataaaaaatgttgtgagtaacaccccactgtttgtacaat 36860520  T
Q  213 tacatcaaaagttcagtc 230  Q
     |||||||||||||||||    
T  36860521 gacatcaaaagttcagtc 36860538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 240
Target Start/End: Complemental strand, 35826662 - 35826533
Alignment:
Q  111 acaaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtaca 210  Q
    |||||||||||||||| ||||||||||   |||||||||||| |||||||||| | |||||||| ||||||||| ||||||||||  ||   ||||||||    
T  35826662 acaaggaaaattctatggtgaagtcatgataatgactttttttgtgaagttaatactataacatcaaaaatgtactgagtaacacttcattgtttgtaca 35826563  T
Q  211 attacatcaaaagttcagtcattatagtat 240  Q
     | ||||||||||||||||| | |||||||    
T  35826562 gtgacatcaaaagttcagtcctcatagtat 35826533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 113 - 240
Target Start/End: Complemental strand, 30969501 - 30969374
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    ||||||||||||| | |||||||||   ||||| || | |||||||||||||| |||||||| |||| |||  ||||||||||||||| |||| ||||||    
T  30969501 aaggaaaattctacaatgaagtcatgagaatgatttatctggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactatttatacaat 30969402  T
Q  213 tacatcaaaagttcagtcattatagtat 240  Q
     ||||||||||||||||| | |||||||    
T  30969401 gacatcaaaagttcagtcctcatagtat 30969374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 230
Target Start/End: Complemental strand, 38528419 - 38528296
Alignment:
Q  107 aattacaaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttg 206  Q
    |||| ||||||||||||||| ||||||||||  |||||  |||| || ||||||||||| |||||||| |||| |||||||||||||||||||   |||     
T  38528419 aattgcaaggaaaattctatggtgaagtcatgaaaatggtttttctgatgaagttaacactataacatcaaaattgtaatgagtaacaccccattgttta 38528320  T
Q  207 tacaattacatcaaaagttcagtc 230  Q
    |||| | |||||||||||||||||    
T  38528319 tacagtgacatcaaaagttcagtc 38528296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 12910348 - 12910445
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtaca 210  Q
    |||||||||||||| ||||||||||  |||||||||||||||||||||||| | |||||||| |||||| || || ||||||||||||  ||||||||    
T  12910348 aaggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactataacatcaaaaatatagtgcgtaacaccccactgtttgtaca 12910445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 147 - 240
Target Start/End: Complemental strand, 14919671 - 14919578
Alignment:
Q  147 ttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtcattatagtat 240  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||| |||  ||| || ||| ||||||||||||||||| | |||||||    
T  14919671 ttttttgatgaagttaacattataacatcaaaaatgtaatgagtaacacctcactgtttatataatgacatcaaaagttcagtcctcatagtat 14919578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 115 - 200
Target Start/End: Complemental strand, 26317859 - 26317774
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccac 200  Q
    ||||||||||||  |||||||||  |||||||||||||||||||||||||| |||||||| |||||| ||| ||||||||||||||    
T  26317859 ggaaaattctatgatgaagtcatgaaaatgacttttttggtgaagttaacactataacatcaaaaatataacgagtaacaccccac 26317774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 230
Target Start/End: Complemental strand, 1429321 - 1429205
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||| ||||| ||||||||||  |||||||| ||||||||||||||||| |||| ||| |||||| || |||||||||||||||  |||||||| |     
T  1429321 aggaaaaatctatggtgaagtcatgaaaatgactcttttggtgaagttaacactatagcatcaaaaatatagtgagtaacaccccactgtttgtacactg 1429222  T
Q  214 acatcaaaagttcagtc 230  Q
     |||||||| |||||||    
T  1429221 gcatcaaaaattcagtc 1429205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 227
Target Start/End: Original strand, 7693230 - 7693342
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||||||  ||||||||||| |||||||||||||| |||||||| |||| |||  ||||||||| |||||  |||||||| |      
T  7693230 ggaaaattctatggtgaagtcattaaaatgacttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacatcccactgtttgtacagtgg 7693329  T
Q  215 catcaaaagttca 227  Q
    |||||||||||||    
T  7693330 catcaaaagttca 7693342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 230
Target Start/End: Original strand, 9200232 - 9200348
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||| ||| ||||||||||  |||| |||||| |||||||||||||| |||||||| |||| |||  |||||||||||||||  |||||||| |     
T  9200232 aggaaaattttatggtgaagtcattaaaataacttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccacagtttgtacagtg 9200331  T
Q  214 acatcaaaagttcagtc 230  Q
    |||||||||||| ||||    
T  9200332 acatcaaaagtttagtc 9200348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 699176 - 699267
Alignment:
Q  141 aatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtcat 232  Q
    |||||||||| || ||||||||||| |||| |||||||||| || |||||||||||||||  |||||||| | |||||||||||||||||||    
T  699176 aatgacttttctgatgaagttaacactatagcataaaaaatctagtgagtaacaccccactgtttgtacagtgacatcaaaagttcagtcat 699267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 115 - 230
Target Start/End: Original strand, 36866762 - 36866877
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| |||||||||   |||||| |||| |||||||||||||| ||||| || |||||| |  |||||||||||||||  ||||||||||      
T  36866762 ggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactataatatcaaaaatattgtgagtaacaccccactgtttgtacaatgg 36866861  T
Q  215 catcaaaagttcagtc 230  Q
    ||||||||||||||||    
T  36866862 catcaaaagttcagtc 36866877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 23116397 - 23116283
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| |||| |||||  |||||||||||||  |||||||||||||||||||| |||| |||| |||||| ||||||||  |||||||| |      
T  23116397 ggaaaattctatggtgacgtcatgaaaatgactttttttatgaagttaacattataacatcaaaactgtagtgagtagcaccccactgtttgtacagtgg 23116298  T
Q  215 catcaaaagttcagt 229  Q
     ||||||||||||||    
T  23116297 aatcaaaagttcagt 23116283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 230
Target Start/End: Original strand, 19119857 - 19119974
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| ||||||||||   |||||||||| |||||||||||||| |||| ||| |||| |||    |||||||||||||  |||||||| |    
T  19119857 aaggaaaattctatggtgaagtcatgagaatgacttttgtggtgaagttaacactatagcatcaaaagtgttgctagtaacaccccactgtttgtacagt 19119956  T
Q  213 tacatcaaaagttcagtc 230  Q
     |||||||||||||||||    
T  19119957 gacatcaaaagttcagtc 19119974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 225
Target Start/End: Complemental strand, 27318649 - 27318552
Alignment:
Q  128 gtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagtt 225  Q
    ||||||||||   ||||| |||| |||||||||||||| || ||||||||||||||| |||||||||| ||||  |||||||||| ||||||||||||    
T  27318649 gtgaagtcatgagaatgatttttctggtgaagttaacactaaaacataaaaaatgtagtgagtaacacaccactgtttgtacaatgacatcaaaagtt 27318552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 232
Target Start/End: Complemental strand, 35511652 - 35511535
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    ||||||| |||| ||||||||||  ||||||| ||| || |||||||||||||||||||| || | |||| |||||||||| ||||  |||||| | | |    
T  35511652 ggaaaatcctatggtgaagtcatgaaaatgacgtttctgatgaagttaacattataacatcaacactgtagtgagtaacactccactgtttgtaaagtga 35511553  T
Q  215 catcaaaagttcagtcat 232  Q
    ||||||||||||||||||    
T  35511552 catcaaaagttcagtcat 35511535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 113 - 240
Target Start/End: Original strand, 27330304 - 27330429
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaat 212  Q
    |||||||||||||| |||||||| |   |||||||||| |||||||||||||| |||||||| |||| |||  |||||||||||  ||  ||||||||||    
T  27330304 aaggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaagtgt--tgagtaacaccttactgtttgtacaat 27330401  T
Q  213 tacatcaaaagttcagtcattatagtat 240  Q
      |||||||||||||||| | |||||||    
T  27330402 ggcatcaaaagttcagtcttcatagtat 27330429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 230
Target Start/End: Original strand, 15724490 - 15724604
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    |||||||||||| ||||||| ||   ||||||||||||||||||||||||| |||||||| |||| | |  |||||||||||||||  ||| |||||| |    
T  15724490 ggaaaattctatggtgaagttatgagaatgacttttttggtgaagttaacactataacatcaaaagttttgtgagtaacaccccactgtttatacaatga 15724589  T
Q  215 catcaaaagttcagtc 230  Q
    |||| |||||||||||    
T  15724590 catc-aaagttcagtc 15724604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 113 - 230
Target Start/End: Complemental strand, 8742064 - 8741946
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaaca-ccccaccatttgtacaa 211  Q
    |||||||||||||| ||||||||||   |||||||||| |||||||||||||| |||| ||| |||| |||  ||||||||| |||||   |||||||||    
T  8742064 aaggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacacccccattgtttgtacaa 8741965  T
Q  212 ttacatcaaaagttcagtc 230  Q
    |  ||||||||||||||||    
T  8741964 tggcatcaaaagttcagtc 8741946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 116 - 230
Target Start/End: Original strand, 32563150 - 32563264
Alignment:
Q  116 gaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattac 215  Q
    ||||||||||| ||||||||||  |||||| |||| || ||||||||||| |||||||| |||| |||  |||||||||| ||||  | |||||| | ||    
T  32563150 gaaaattctatggtgaagtcattaaaatgatttttctgatgaagttaacactataacatcaaaagtgttgtgagtaacactccactgtctgtacagtgac 32563249  T
Q  216 atcaaaagttcagtc 230  Q
    |||||||||||||||    
T  32563250 atcaaaagttcagtc 32563264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 114 - 229
Target Start/End: Original strand, 39572818 - 39572933
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| ||||||||||   |||||||||| | || ||||||| | ||||| |||||||||||  |||||||||| ||||  ||||| || |     
T  39572818 aggaaaattctatggtgaagtcatgagaatgacttttctagttaagttaatactataatataaaaaatgttgtgagtaacactccactgtttgtgcagtg 39572917  T
Q  214 acatcaaaagttcagt 229  Q
    ||||||||||||||||    
T  39572918 acatcaaaagttcagt 39572933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 35504168 - 35504240
Alignment:
Q  116 gaaaattctatagtgaagtcatacaaatgacttttttggtgaag---ttaacattataacataaaaaatgtaa 185  Q
    |||||||||||  |||||||||| |||||| |||||||||||||   ||||||||||||||||||||||||||    
T  35504168 gaaaattctatgttgaagtcataaaaatgatttttttggtgaagttattaacattataacataaaaaatgtaa 35504240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 13956522 - 13956425
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtaca 210  Q
    |||||||||||||  ||||||||||  ||||||||||| |  ||||||||||| |||||||| |||| |||| ||||||||||| |||  ||||||||    
T  13956522 aaggaaaattctacggtgaagtcatgaaaatgacttttctcatgaagttaacactataacatcaaaactgtagtgagtaacacctcactgtttgtaca 13956425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 115 - 200
Target Start/End: Complemental strand, 14409501 - 14409416
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccac 200  Q
    |||||||||||| ||||||||||   ||||| |||| ||||||||| |||| |||||||| ||||||||| |||||| ||||||||    
T  14409501 ggaaaattctatggtgaagtcatgagaatgatttttctggtgaagtcaacactataacatcaaaaatgtagtgagtagcaccccac 14409416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 22255608 - 22255665
Alignment:
Q  148 tttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccattt 205  Q
    |||||| ||||||||||| |||||||| |||||||||||||||||||||||| |||||    
T  22255608 tttttgatgaagttaacactataacatcaaaaatgtaatgagtaacaccccatcattt 22255665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 117 - 230
Target Start/End: Original strand, 26268076 - 26268189
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    ||||||||| |||||||||||   ||||| |||| |||||||||||||| |||| ||| |||| |||  |||||||||||||||  |||||||  | |||    
T  26268076 aaaattctacagtgaagtcatgagaatgatttttctggtgaagttaacactatagcatcaaaagtgttttgagtaacaccccactgtttgtacggtgaca 26268175  T
Q  217 tcaaaagttcagtc 230  Q
    ||||||||| ||||    
T  26268176 tcaaaagtttagtc 26268189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 115 - 240
Target Start/End: Complemental strand, 31786821 - 31786696
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatta 214  Q
    ||||||||||||||||||||  |   ||||||||||||||||||||||||| |||| ||| ||||||||| |||| |   ||||||  |||||||| |      
T  31786821 ggaaaattctatagtgaagtagtgagaatgacttttttggtgaagttaacactatagcatgaaaaatgtagtgagcactgccccactgtttgtacagtgg 31786722  T
Q  215 catcaaaagttcagtcattatagtat 240  Q
    ||||||||||||| || | |||||||    
T  31786721 catcaaaagttcaatcctcatagtat 31786696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 147 - 240
Target Start/End: Complemental strand, 43308794 - 43308702
Alignment:
Q  147 ttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtcattatagtat 240  Q
    |||||| || |||||||||||||||||| ||||||||||||| ||||| |||||  || |||||||  |||||||||||||||| | |||||||    
T  43308794 ttttttagtaaagttaacattataacatcaaaaatgtaatgaataaca-cccactgttcgtacaatggcatcaaaagttcagtcctcatagtat 43308702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 35504427 - 35504490
Alignment:
Q  177 aaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtcattatagtat 240  Q
    |||||||||||||||||||| |||| ||||||  || |||||||||||||| ||||||||||||    
T  35504427 aaaatgtaatgagtaacacctcaccgtttgtatgatgacatcaaaagttcaatcattatagtat 35504490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 230
Target Start/End: Original strand, 5837581 - 5837670
Alignment:
Q  141 aatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtc 230  Q
    |||||||||| |||||||| ||||| |||| ||| |||| |||  |||||||||||||||  |||||||| | ||||||||| |||||||    
T  5837581 aatgacttttctggtgaaggtaacactatagcatcaaaagtgttgtgagtaacaccccactgtttgtacagtgacatcaaaatttcagtc 5837670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 230
Target Start/End: Complemental strand, 21088941 - 21088826
Alignment:
Q  115 ggaaaattctatagtgaagtcatacaaatgactttttt-ggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    |||||||||||   ||||||||   ||||||||||||| ||||||||||| | | ||  |||||||||||  ||||| |||||||||  ||||||||||     
T  21088941 ggaaaattctacgatgaagtcacgaaaatgactttttttggtgaagttaa-actgtagtataaaaaatgttgtgagtgacaccccactgtttgtacaatg 21088843  T
Q  214 acatcaaaagttcagtc 230  Q
    |||||||||||||||||    
T  21088842 acatcaaaagttcagtc 21088826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 240
Target Start/End: Complemental strand, 25501099 - 25500976
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||||||| ||||||||||   |||||||||| |||| ||||||||| |||| ||| |||| |||  ||| ||||||| |||  |||||||| |  ||    
T  25501099 aaaattctatggtgaagtcatgagaatgacttttctggtaaagttaacactatagcatcaaaagtgttgtgaataacacctcactgtttgtacactgcca 25501000  T
Q  217 tcaaaagttcagtcattatagtat 240  Q
    ||||||||| ||||  ||||||||    
T  25500999 tcaaaagttaagtccctatagtat 25500976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 192
Target Start/End: Complemental strand, 16004552 - 16004474
Alignment:
Q  115 ggaaaattctatagtgaagtcat-acaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaa 192  Q
    |||||||||||| || ||||||| | || |||||||| |||||||||||||| |||||||| ||||||||  |||||||    
T  16004552 ggaaaattctatggtaaagtcatgagaattgacttttctggtgaagttaacactataacatcaaaaatgttgtgagtaa 16004474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 22616492 - 22616542
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaa 163  Q
    |||||||||||||| ||||||||||  ||||||||||| ||||||||||||    
T  22616492 aaggaaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaa 22616542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 230
Target Start/End: Original strand, 22980819 - 22980908
Alignment:
Q  141 aatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtc 230  Q
    |||||||||| |||||||||||||| ||||  || ||||||  | ||||||| |||||||  ||||  |||| |||||||||||||||||    
T  22980819 aatgacttttctggtgaagttaacactatagtatcaaaaatacagtgagtaataccccactgtttgagcaatgacatcaaaagttcagtc 22980908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 230
Target Start/End: Original strand, 8436965 - 8437081
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    |||| |||||||  ||||||||||   ||||| |||||||||||| |||||| |||| | |  ||| |||| ||||||||| ||||   |||||||| |     
T  8436965 aggacaattctaatgtgaagtcatgagaatgatttttttggtgaaattaacactatagcttccaaagtgtagtgagtaacatcccattgtttgtacagtg 8437064  T
Q  214 acatcaaaagttcagtc 230  Q
    |||||||||||||||||    
T  8437065 acatcaaaagttcagtc 8437081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 240
Target Start/End: Original strand, 11898015 - 11898127
Alignment:
Q  128 gtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttca 227  Q
    ||||||||||   ||| |||||| |||| ||||||| |||||| ||| |||| || | |||||||||||| || | ||||||| | |||||||||||| |    
T  11898015 gtgaagtcatgataataacttttctggtaaagttaatattatagcatcaaaagtgcactgagtaacaccctactagttgtacagtgacatcaaaagttta 11898114  T
Q  228 gtcattatagtat 240  Q
    ||| | |||||||    
T  11898115 gtcctcatagtat 11898127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 163
Target Start/End: Original strand, 21320752 - 21320799
Alignment:
Q  116 gaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaa 163  Q
    ||||||||||| ||||||| ||| |||||||||||||| |||||||||    
T  21320752 gaaaattctatggtgaagtaataaaaatgacttttttgatgaagttaa 21320799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 27163550 - 27163584
Alignment:
Q  75 ataaagggtaaattagtcaaaacataatctataat 109  Q
    |||||||||||||| ||||||||||||||||||||    
T  27163550 ataaagggtaaatttgtcaaaacataatctataat 27163584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 198
Target Start/End: Original strand, 8466743 - 8466828
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacacccc 198  Q
    ||||||||||||||  ||| |||||   |||||||||| |||||||||||||| | |||||| |||| |||  ||| |||||||||    
T  8466743 aaggaaaattctatgatgaggtcatgagaatgacttttctggtgaagttaacactgtaacatcaaaagtgttgtgaataacacccc 8466828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 5748442 - 5748478
Alignment:
Q  129 tgaagtcatacaaatgacttttttggtgaagttaaca 165  Q
    |||||||||  ||||||||||||||||||||||||||    
T  5748442 tgaagtcatgaaaatgacttttttggtgaagttaaca 5748478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 7889 - 8012
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||||||| ||||||| |||  ||||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||  |||||||||| |||    
T  7889 aaaattctatggtgaagttataagaatgacttttttgatgaagttaacactataacatcaaaattgtaatgagtaacaccccactgtttgtacaatgaca 7988  T
Q  217 tcaaaagttcagtcattatagtat 240  Q
    |||||||||||||| | |||||||    
T  7989 tcaaaagttcagtcctcatagtat 8012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 117 - 228
Target Start/End: Complemental strand, 146199 - 146088
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||||||  |||||||||||  ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||    
T  146199 aaaattctacggtgaagtcataagaatgatttttttggttaagttaacattataacataaaaaatgtaatgagtaacaccccattatttgtagaatgaca 146100  T
Q  217 tcaaaagttcag 228  Q
    ||||||||||||    
T  146099 tcaaaagttcag 146088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 55; Significance: 1e-22; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 240
Target Start/End: Original strand, 133 - 259
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaatt 213  Q
    ||||||||||||| |||||||||   ||||||||||| |||||||||||||| | ||  |||||||||||  |||||||||| ||||  ||||||||||     
T  133 aggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacactgtagtataaaaaatgttgtgagtaacactccactgtttgtacaatg 232  T
Q  214 acatcaaaagttcagtcattatagtat 240  Q
     |||||||||||||||| | |||||||    
T  233 gcatcaaaagttcagtcctcatagtat 259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 225
Target Start/End: Complemental strand, 94543 - 94458
Alignment:
Q  140 aaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagtt 225  Q
    ||||||||||| || |||||||||||||||||||| |||| |||| |||||||||||||||  |||||||| |  |||||||||||    
T  94543 aaatgacttttctgatgaagttaacattataacatcaaaattgtagtgagtaacaccccactgtttgtacagtggcatcaaaagtt 94458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 408756 - 408704
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaaca 165  Q
    |||||||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  408756 aaggaaaattctatggtgaagtcataaaaatgatttttttggtgaagttaaca 408704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 408559 - 408498
Alignment:
Q  169 taacataaaaaatgtaatgagtaacaccccaccatttgtacaattacatcaaaagttcagtc 230  Q
    |||||| |||||||||||||||||||||  ||| |||||| ||| | |||||||||||||||    
T  408559 taacatcaaaaatgtaatgagtaacaccttaccgtttgtaaaatgaaatcaaaagttcagtc 408498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 43959 - 44082
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||||||| |||||||| ||  || |||||||||||||||||||||  ||||| || |||||||||||||||||||||||    ||||||||||  ||    
T  43959 aaaattctatggtgaagtcgtaagaaagacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacaccccgttgtttgtacaatggca 44058  T
Q  217 tcaaaagttcagtcattatagtat 240  Q
    | |||||||||||| | |||||||    
T  44059 taaaaagttcagtcctcatagtat 44082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 117 - 240
Target Start/End: Complemental strand, 154828 - 154705
Alignment:
Q  117 aaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttgtacaattaca 216  Q
    |||||||||| |||||||| ||  || |||||||||||||||||||||  ||||| || |||||||||||||||||||||||    ||||||||||  ||    
T  154828 aaaattctatggtgaagtcgtaagaaagacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacaccccgttgtttgtacaatggca 154729  T
Q  217 tcaaaagttcagtcattatagtat 240  Q
    | |||||||||||| | |||||||    
T  154728 taaaaagttcagtcctcatagtat 154705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 114 - 206
Target Start/End: Original strand, 42347 - 42439
Alignment:
Q  114 aggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacaccccaccatttg 206  Q
    ||||||||| ||| ||||||||||   ||| | |||| |||||||||||||| |||||||| |||| |||  ||||||||||||||| |||||    
T  42347 aggaaaattttatggtgaagtcatgagaataatttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactatttg 42439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 100819 - 100886
Alignment:
Q  113 aaggaaaattctatagtgaagtcatacaaatgacttttttggtgaagttaacattataacataaaaaa 180  Q
    |||||||||||||| ||||||||||   ||||| ||||||||||||||||||  |||||||| |||||    
T  100819 aaggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacgctataacatcaaaaa 100886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 198
Target Start/End: Original strand, 11908 - 11990
Alignment:
Q  117 aaaattctatagtgaagtcat-acaaatgacttttttggtgaagttaacattataacataaaaaatgtaatgagtaacacccc 198  Q
    |||||||||| |||||||||| | ||||||||||| ||||||| ||||||  ||||||| |||| |||  |||||||||||||    
T  11908 aaaattctatggtgaagtcatgagaaatgacttttctggtgaaattaacaccataacattaaaagtgttgtgagtaacacccc 11990  T

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Target: scaffold0662 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 6982 - 7026
Alignment:
Q  118 aaattctatagtgaagtcatacaaatgacttttttggtgaagtta 162  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||    
T  6982 aaattctatggtgaagtcattcaattgacttttttggtgaagtta 7026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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