View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0809_low_156 (Length: 274)

Name: NF0809_low_156
Description: NF0809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0809_low_156
NF0809_low_156
[»] chr7 (24 HSPs)
chr7 (29-274)||(10193399-10193653)
chr7 (136-215)||(41387473-41387552)
chr7 (136-216)||(30610887-30610967)
chr7 (146-209)||(40121706-40121769)
chr7 (136-216)||(422742-422822)
chr7 (146-209)||(257355-257418)
chr7 (145-216)||(14092264-14092335)
chr7 (145-216)||(14402282-14402353)
chr7 (138-209)||(28909977-28910048)
chr7 (146-207)||(43167983-43168044)
chr7 (136-196)||(3973103-3973163)
chr7 (146-209)||(41670821-41670884)
chr7 (136-207)||(41709961-41710032)
chr7 (136-206)||(23721086-23721156)
chr7 (144-201)||(14091997-14092054)
chr7 (144-201)||(14402015-14402072)
chr7 (145-213)||(32000769-32000837)
chr7 (136-216)||(46753070-46753150)
chr7 (146-209)||(1661279-1661342)
chr7 (146-209)||(1663693-1663755)
chr7 (156-202)||(39079724-39079770)
chr7 (136-216)||(28359026-28359107)
chr7 (152-209)||(41389265-41389322)
chr7 (136-216)||(46870256-46870337)
[»] chr1 (26 HSPs)
chr1 (54-274)||(19459575-19459804)
chr1 (139-209)||(41590316-41590386)
chr1 (136-208)||(19811100-19811172)
chr1 (146-209)||(8520181-8520244)
chr1 (146-209)||(17419740-17419803)
chr1 (146-209)||(31305664-31305727)
chr1 (138-209)||(33879866-33879937)
chr1 (138-209)||(33964318-33964389)
chr1 (138-208)||(45264608-45264678)
chr1 (136-209)||(6868076-6868149)
chr1 (138-191)||(14623152-14623205)
chr1 (146-209)||(19937131-19937194)
chr1 (146-209)||(20735475-20735538)
chr1 (142-209)||(34626862-34626929)
chr1 (146-209)||(43423232-43423295)
chr1 (136-205)||(51515657-51515727)
chr1 (136-209)||(12410348-12410421)
chr1 (139-216)||(40566347-40566424)
chr1 (168-225)||(41590604-41590661)
chr1 (137-225)||(18998655-18998743)
chr1 (136-216)||(33248411-33248491)
chr1 (136-216)||(33268583-33268663)
chr1 (138-209)||(2697419-2697490)
chr1 (138-209)||(4022213-4022284)
chr1 (136-208)||(12581432-12581505)
chr1 (136-209)||(13978528-13978601)
[»] chr8 (19 HSPs)
chr8 (136-209)||(30590391-30590464)
chr8 (146-209)||(18905809-18905872)
chr8 (136-225)||(38887044-38887133)
chr8 (136-215)||(26639054-26639133)
chr8 (138-209)||(31766946-31767017)
chr8 (136-209)||(23027593-23027666)
chr8 (146-209)||(20298604-20298667)
chr8 (146-209)||(21085236-21085299)
chr8 (138-209)||(23027916-23027987)
chr8 (146-209)||(36997119-36997182)
chr8 (138-209)||(44933169-44933240)
chr8 (146-209)||(21653279-21653343)
chr8 (146-209)||(21653756-21653820)
chr8 (136-207)||(28488422-28488493)
chr8 (138-196)||(3184004-3184062)
chr8 (137-209)||(15157026-15157098)
chr8 (144-209)||(40754395-40754461)
chr8 (144-209)||(22277475-22277540)
chr8 (136-209)||(34529930-34530003)
[»] chr5 (17 HSPs)
chr5 (136-209)||(4796301-4796374)
chr5 (136-209)||(31973522-31973595)
chr5 (146-209)||(13843650-13843713)
chr5 (146-209)||(13843966-13844029)
chr5 (146-208)||(20811407-20811469)
chr5 (138-209)||(873784-873855)
chr5 (146-209)||(27760344-27760407)
chr5 (138-209)||(28010204-28010275)
chr5 (146-208)||(20837762-20837824)
chr5 (152-209)||(1028181-1028238)
chr5 (136-209)||(24918107-24918180)
chr5 (138-209)||(37995722-37995793)
chr5 (147-209)||(27760029-27760091)
chr5 (136-209)||(15844312-15844385)
chr5 (136-209)||(24994015-24994088)
chr5 (136-209)||(28009885-28009958)
chr5 (157-209)||(17016181-17016233)
[»] chr2 (20 HSPs)
chr2 (155-216)||(3003988-3004049)
chr2 (146-209)||(3976559-3976622)
chr2 (138-209)||(15820189-15820260)
chr2 (146-209)||(43169195-43169258)
chr2 (136-205)||(18183409-18183478)
chr2 (136-209)||(26760914-26760987)
chr2 (137-209)||(18959505-18959577)
chr2 (146-209)||(3976243-3976306)
chr2 (146-209)||(3977091-3977154)
chr2 (146-209)||(18901952-18902015)
chr2 (146-209)||(21213973-21214036)
chr2 (146-209)||(43195737-43195800)
chr2 (136-188)||(21373926-21373978)
chr2 (149-209)||(23054282-23054342)
chr2 (138-209)||(5424844-5424915)
chr2 (146-209)||(17509062-17509125)
chr2 (146-209)||(21214289-21214352)
chr2 (147-216)||(11339777-11339846)
chr2 (136-215)||(9889407-9889487)
chr2 (149-209)||(30166167-30166227)
[»] chr3 (23 HSPs)
chr3 (136-208)||(662669-662741)
chr3 (136-225)||(25568440-25568529)
chr3 (146-209)||(4256187-4256250)
chr3 (146-209)||(44573279-44573342)
chr3 (146-209)||(13769379-13769442)
chr3 (138-205)||(24860152-24860219)
chr3 (146-209)||(41380677-41380740)
chr3 (146-209)||(43101459-43101522)
chr3 (146-209)||(45443233-45443296)
chr3 (146-209)||(50203945-50204008)
chr3 (146-209)||(54368992-54369055)
chr3 (136-209)||(14170087-14170160)
chr3 (136-209)||(34250440-34250513)
chr3 (146-203)||(44573908-44573965)
chr3 (138-209)||(3985718-3985789)
chr3 (146-209)||(4255463-4255526)
chr3 (150-209)||(27219286-27219345)
chr3 (136-216)||(39225106-39225190)
chr3 (141-204)||(54861473-54861536)
chr3 (146-209)||(44573595-44573655)
chr3 (136-216)||(51917823-51917903)
chr3 (146-209)||(34715543-34715606)
chr3 (152-209)||(48685405-48685463)
[»] chr4 (29 HSPs)
chr4 (146-209)||(991157-991220)
chr4 (146-209)||(50857965-50858028)
chr4 (146-209)||(50858281-50858344)
chr4 (138-209)||(53738296-53738367)
chr4 (146-209)||(53740135-53740198)
chr4 (140-205)||(30491043-30491108)
chr4 (138-209)||(15665097-15665169)
chr4 (146-209)||(990500-990563)
chr4 (146-205)||(990991-991050)
chr4 (146-209)||(45427340-45427403)
chr4 (146-209)||(52214568-52214631)
chr4 (144-209)||(43972306-43972371)
chr4 (137-205)||(26942679-26942747)
chr4 (137-220)||(52043155-52043238)
chr4 (138-205)||(56509554-56509621)
chr4 (138-208)||(43971984-43972054)
chr4 (136-185)||(44898834-44898883)
chr4 (152-209)||(45427024-45427081)
chr4 (136-216)||(48046299-48046380)
chr4 (137-209)||(26942959-26943031)
chr4 (146-209)||(29669451-29669513)
chr4 (146-209)||(29669766-29669828)
chr4 (146-209)||(29734514-29734577)
chr4 (146-209)||(32988358-32988421)
chr4 (138-209)||(36558554-36558625)
chr4 (144-208)||(22867035-22867099)
chr4 (137-205)||(23311562-23311629)
chr4 (137-205)||(26942464-26942532)
chr4 (136-208)||(46332622-46332694)
[»] chr6 (18 HSPs)
chr6 (146-209)||(10418426-10418489)
chr6 (146-209)||(24055197-24055260)
chr6 (136-206)||(9602078-9602148)
chr6 (136-205)||(1205956-1206025)
chr6 (152-209)||(1408970-1409027)
chr6 (136-224)||(16509719-16509808)
chr6 (136-208)||(1205639-1205711)
chr6 (141-203)||(130761-130824)
chr6 (146-209)||(19054446-19054509)
chr6 (146-207)||(21043871-21043932)
chr6 (146-207)||(21067147-21067208)
chr6 (146-207)||(21088938-21088999)
chr6 (138-207)||(32215853-32215922)
chr6 (153-209)||(10733526-10733582)
chr6 (146-209)||(1744930-1744993)
chr6 (138-209)||(12134571-12134642)
chr6 (146-209)||(19753692-19753755)
chr6 (143-205)||(31965-32027)


Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 29 - 274
Target Start/End: Complemental strand, 10193653 - 10193399
Alignment:
Q  29 agtggactttgttctcttccttgccaaggaccttagtctttatgattgaattttgacatacaccctgttggaaattccgccttaattggtgtttgcccta 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10193653 agtggactttgttctcttccttgccaaggaccttagtctttatgattgaattttgacatacaccctgttggaaattccgccttaattggtgtttgcccta 10193554  T
Q  129 gctgcctcatttg---------ggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccacaatgcctaaag 219  Q
    |||||||||||||         |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||    
T  10193553 gctgcctcatttgcggcatttgggttgccttaattgcagcctccaactcctttattgtgttgtgtgtgagggggtgggtttagtcccgcaatgtctaaag 10193454  T
Q  220 acatgaactaaacagggcataggaagcttggacaatcttcaccttaaaagtcaat 274  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10193453 acatgaactaaacagggcataggaagcttggacaatcttcaccttacaagtcaat 10193399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 41387473 - 41387552
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccacaatgcct 215  Q
    ||||||||||||||| |||||| |||||||| |||| |||||||| ||| ||| |||||||||||||||||||| |||||    
T  41387473 catttgggttgccttcattgcaacctccaacaccttcattgtgttaggtatgaaggggtgggtttagtcccacattgcct 41387552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 30610967 - 30610887
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccacaatgccta 216  Q
    ||||||||||||||| ||||||||||||||| |||| ||||||||||||| || ||||||| |||| || |||| ||||||    
T  30610967 catttgggttgccttcattgcagcctccaacaccttcattgtgttgggtgggaaggggtggatttaatctcacattgccta 30610887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 40121769 - 40121706
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||| |||||    
T  40121769 gccttaattgcagcctccaacacctttattgtgttggctttgagggggtggatttagttccaca 40121706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 422822 - 422742
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccacaatgccta 216  Q
    ||||||||||||||  |||||||| |||||| |||| |||||||||||||||| ||||||  |||| ||||||| ||||||    
T  422822 catttgggttgcctccattgcagcttccaacaccttcattgtgttgggtgtgaaggggtgactttaatcccacattgccta 422742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 257418 - 257355
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  257418 gccttcattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 257355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 216
Target Start/End: Complemental strand, 14092335 - 14092264
Alignment:
Q  145 tgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccacaatgccta 216  Q
    |||||||||| |||| |||| | |||| |||||| ||| |||||||||||||||||||||||||| ||||||    
T  14092335 tgccttaatttcagcttccatcaccttcattgtgctggatgtgagggggtgggtttagtcccacattgccta 14092264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 216
Target Start/End: Complemental strand, 14402353 - 14402282
Alignment:
Q  145 tgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccacaatgccta 216  Q
    |||||||||| |||| |||| | |||| |||||| ||| |||||||||||||||||||||||||| ||||||    
T  14402353 tgccttaatttcagcttccatcaccttcattgtgctggatgtgagggggtgggtttagtcccacattgccta 14402282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 28909977 - 28910048
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| |||| || ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  28909977 tttggtttgctttcattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 28910048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 43168044 - 43167983
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtccca 207  Q
    ||||| ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||    
T  43168044 gccttcattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtccca 43167983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 3973103 - 3973163
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgg 196  Q
    ||||||||||||||| |||||||||| |||| |||| || ||||||||| |||||||||||    
T  3973103 catttgggttgccttcattgcagccttcaacaccttcatcgtgttgggtttgagggggtgg 3973163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 41670821 - 41670884
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| || | |||||||||| | ||||||||||| ||||||||||||    
T  41670821 gccttcattgcagcctccaacaccctcattgtgttggctttgagggggtggatttagtcccaca 41670884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 41709961 - 41710032
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtccca 207  Q
    ||||| ||||| ||| |||||| |||||||| |||| |||||||||| | ||||||||||| ||||||||||    
T  41709961 catttaggttgtcttcattgcaacctccaacaccttcattgtgttggctttgagggggtggatttagtccca 41710032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 23721086 - 23721156
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtccc 206  Q
    ||||||||||||||| |||||||||||||||  | | ||||||||||   ||| |||||||||||||||||    
T  23721086 catttgggttgccttcattgcagcctccaacaacatcattgtgttggacttgaaggggtgggtttagtccc 23721156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 14092054 - 14091997
Alignment:
Q  144 ttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggttta 201  Q
    ||||||| ||||||||||||||| |||| |||||||||||||||| ||| | ||||||    
T  14092054 ttgccttcattgcagcctccaacaccttcattgtgttgggtgtgacgggttaggttta 14091997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 14402072 - 14402015
Alignment:
Q  144 ttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggttta 201  Q
    ||||||| ||||||||||||||| |||| |||||||||||||||| ||| | ||||||    
T  14402072 ttgccttcattgcagcctccaacaccttcattgtgttgggtgtgacgggttaggttta 14402015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 32000769 - 32000837
Alignment:
Q  145 tgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccacaatgc 213  Q
    |||||| |||||||||| |||| |||| || ||||||| | ||||||| ||| ||||||||||||||||    
T  32000769 tgccttcattgcagccttcaacaccttcatggtgttggctttgaggggatggatttagtcccacaatgc 32000837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 46753070 - 46753150
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccacaatgccta 216  Q
    ||||||||||||||| || ||||||||||||   ||  ||||||||||||||| ||||| | |||||||| ||| ||||||    
T  46753070 catttgggttgccttcatcgcagcctccaacatgttccttgtgttgggtgtgaaggggtagatttagtccaacattgccta 46753150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 1661342 - 1661279
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||| ||||| | ||| ||||||| ||||||||||||    
T  1661342 gccttcattgcagcctccaacaccttcattgcgttggctttgacggggtggatttagtcccaca 1661279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 1663755 - 1663693
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||| | ||| ||||||| ||||||||||||    
T  1663755 gccttcattgcagcctccaacaccttcattgtgttggctttga-ggggtggatttagtcccaca 1663693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 39079770 - 39079724
Alignment:
Q  156 cagcctccaactcctttattgtgttgggtgtgagggggtgggtttag 202  Q
    ||||||||||| |||| |||||||||||||||| ||||||| |||||    
T  39079770 cagcctccaacaccttcattgtgttgggtgtgaaggggtggatttag 39079724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 28359026 - 28359107
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtg-agggggtgggtttagtcccacaatgccta 216  Q
    |||||||||| |||| ||||||||||||||| |||| ||| | ||||||||| |  |||||| || ||||||||| ||||||    
T  28359026 catttgggtttccttcattgcagcctccaacaccttcattattttgggtgtgaaatgggtggattcagtcccacattgccta 28359107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 41389265 - 41389322
Alignment:
Q  152 attgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    |||||||||  |||| |||| |||||||| ||||||| ||||||| ||||||||||||    
T  41389265 attgcagccatcaacaccttcattgtgttaggtgtgaaggggtggatttagtcccaca 41389322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 46870256 - 46870337
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtga-gggggtgggtttagtcccacaatgccta 216  Q
    |||||||| |||| |  |||||||||||||| | || ||||| | |||||||| |||||||| |||||||||||| ||||||    
T  46870256 catttgggctgccatctttgcagcctccaacactttcattgtttagggtgtgaagggggtggatttagtcccacattgccta 46870337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 158; Significance: 4e-84; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 54 - 274
Target Start/End: Original strand, 19459575 - 19459804
Alignment:
Q  54 aaggaccttagtctttatgattgaattttgacatacaccctgttggaaattccgccttaattggtgtttgccctagctgcct---------catttgggt 144  Q
    |||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||         |||||||||    
T  19459575 aaggacctcagcctttatgattgaattttgacatacaccttgttggaaattccgccttaattggtgtctgccctagctgccttacttgcggcatttgggt 19459674  T
Q  145 tgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccacaatgcctaaagacatgaactaaacagggcataggaa 244  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  19459675 tgcctaaattgcagcctccaactccttcattgtgttgggtgtgagggggtgggtttagtcccacaatgcctaaagtcatgacctaaacagagcataggaa 19459774  T
Q  245 gcttggacaatcttcaccttaaaagtcaat 274  Q
    ||||||||||||||||||||| ||||||||    
T  19459775 gcttggacaatcttcaccttacaagtcaat 19459804  T

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Target: chr1; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 139 - 209
Target Start/End: Complemental strand, 41590386 - 41590316
Alignment:
Q  139 ttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    |||||||||||| ||||||||||||||| |||| ||||||| |||||||| |||||||||||||| |||||    
T  41590386 ttgggttgccttcattgcagcctccaacaccttcattgtgtcgggtgtgaaggggtgggtttagttccaca 41590316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 19811172 - 19811100
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccac 208  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||||||||||| |  |||| |||||||||||    
T  19811172 catttgggttgccttcattgcagcctccaactccttcgttgtgttgggtgtgaagatgtggatttagtcccac 19811100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 8520244 - 8520181
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  8520244 gccttcattgcagcctccaaccccttcattgtgttggctttgagggggtggatttagtcccaca 8520181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 17419740 - 17419803
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||||| ||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  17419740 gccttaattgcagcctcaaacaccttcattgtgttggctttgagggggtggatttagtcccaca 17419803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 31305664 - 31305727
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  31305664 gccttcattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 31305727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 33879937 - 33879866
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||| ||||||||||||||| |||| |||||||||| | |||| |||||| ||||||||||||    
T  33879937 tttggtttgccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcccaca 33879866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 33964318 - 33964389
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||| ||||||||||||||| |||| |||||||||| | |||| |||||| ||||||||||||    
T  33964318 tttggtttgccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcccaca 33964389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 208
Target Start/End: Original strand, 45264608 - 45264678
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccac 208  Q
    ||||| |||||||  |||||||||||||| |||| |||||||||| | ||||||||||| |||||||||||    
T  45264608 tttggtttgccttctttgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccac 45264678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 6868076 - 6868149
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||| | | ||||||||||||| |||| ||| |||||||| ||| ||||||| ||||||||||||    
T  6868076 catttgggttgccctcactgcagcctccaacaccttcattttgttgggtttgaaggggtggatttagtcccaca 6868149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 14623152 - 14623205
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgaggg 191  Q
    ||||||||||||| ||||||||||||||| |||| |||||||||||||| ||||    
T  14623152 tttgggttgccttcattgcagcctccaacaccttcattgtgttgggtgtaaggg 14623205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 19937194 - 19937131
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    |||||||||||| |||||||| |||| |||||||||| | ||| ||||||| ||||||||||||    
T  19937194 gccttaattgcatcctccaacaccttcattgtgttggctttgatggggtggatttagtcccaca 19937131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 20735475 - 20735538
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||| | ||||||||||| |||| |||||||    
T  20735475 gccttcattgcagcctccaacaccttcattgtgttggctttgagggggtggatttaatcccaca 20735538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 34626929 - 34626862
Alignment:
Q  142 ggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||| ||||||||||||||| |||| ||| |||||||||||| || |||| ||||||| ||||    
T  34626929 ggttgccttcattgcagcctccaacaccttcattctgttgggtgtgaaggagtggatttagtctcaca 34626862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 43423232 - 43423295
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    |||| |||||||||||||||| |||| |||||||||| | ||||||||||| |||| |||||||    
T  43423232 gcctaaattgcagcctccaacaccttcattgtgttggctttgagggggtggatttattcccaca 43423295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 51515657 - 51515727
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtg-agggggtgggtttagtcc 205  Q
    ||||||| ||||||| ||||| ||||||||| |||| ||||||||||||||| | ||||||| ||||||||    
T  51515657 catttggattgccttcattgctgcctccaacaccttcattgtgttgggtgtgaaaggggtggatttagtcc 51515727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 12410348 - 12410421
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    |||||||||| ||||  |||||||||||||| |||| || ||||||||||||| || || | ||||||||||||    
T  12410348 catttgggttacctttgttgcagcctccaacaccttcatcgtgttgggtgtgaaggagttgatttagtcccaca 12410421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 216
Target Start/End: Complemental strand, 40566424 - 40566347
Alignment:
Q  139 ttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccacaatgccta 216  Q
    |||||||||||| ||| |||| |||||| |||| |||||||||||||||| ||| ||| || ||||||| | ||||||    
T  40566424 ttgggttgccttcattacagcttccaacaccttcattgtgttgggtgtgaagggatggattcagtcccatattgccta 40566347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 41590661 - 41590604
Alignment:
Q  168 cctttattgtgttgggtgtgagggggtgggtttagtcccacaatgcctaaagacatga 225  Q
    |||| |||||||||||||||||||||||  |||||||||||| |||||| ||| ||||    
T  41590661 ccttcattgtgttgggtgtgagggggtgaatttagtcccacattgcctagagatatga 41590604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 225
Target Start/End: Original strand, 18998655 - 18998743
Alignment:
Q  137 atttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccacaatgcctaaagacatga 225  Q
    |||||||||  ||| ||||||||| ||||| ||||   ||||||||||||||  |||||| |||||||||||| |||||| ||| ||||    
T  18998655 atttgggttttcttcattgcagccaccaacaccttcgatgtgttgggtgtgaaagggtggatttagtcccacattgcctagagatatga 18998743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 33248491 - 33248411
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccacaatgccta 216  Q
    |||| ||||||| |||||||||  ||||||| |||| |||||||||||||| |  |||||| ||||||| |||| ||||||    
T  33248491 cattcgggttgcattaattgcaatctccaacaccttcattgtgttgggtgttaacgggtggatttagtctcacattgccta 33248411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 33268663 - 33268583
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccacaatgccta 216  Q
    |||| ||||||| |||||||||  ||||||| |||| |||||||||||||| |  |||||| ||||||| |||| ||||||    
T  33268663 cattcgggttgcattaattgcaatctccaacaccttcattgtgttgggtgttaacgggtggatttagtctcacattgccta 33268583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 2697490 - 2697419
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||| ||| ||||||||||||||| |||| ||||||  || | ||||||||||| ||||||||||||    
T  2697490 tttggtttgtcttcattgcagcctccaacaccttcattgtgacggctttgagggggtggatttagtcccaca 2697419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 4022284 - 4022213
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| |||||||  | ||| |||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  4022284 tttggtttgccttcgtcgcaacctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 4022213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 12581505 - 12581432
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtg-agggggtgggtttagtcccac 208  Q
    |||||||||||||||  || |||| |||||| |||| ||||||||||||||| |  |||||| |||||||||||    
T  12581505 catttgggttgcctttgtttcagcttccaacaccttcattgtgttgggtgtgaaatgggtggatttagtcccac 12581432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 13978528 - 13978601
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    |||||| |||||||| |||||| |||||||  | || |||||||||||||||| ||| ||  ||||||||||||    
T  13978528 catttgtgttgccttcattgcatcctccaatacgttcattgtgttgggtgtgaagggatgtctttagtcccaca 13978601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 30590391 - 30590464
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||| ||||||||||||||| |||| |||||||| ||||||| ||||||| ||||||||||||    
T  30590391 catttgggttgccttcattgcagcctccaacaccttcattgtgtttggtgtgaaggggtggatttagtcccaca 30590464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 18905809 - 18905872
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||    
T  18905809 gccttaattgcagcctccaacacctttattgtgttggctttgagggggtggatttagtcccaca 18905872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 225
Target Start/End: Original strand, 38887044 - 38887133
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccacaatgcctaaagacatga 225  Q
    |||||||||||||||  |||||||||||||| |||| |||||||||||||||| ||||| | |||| ||||||| |||||| ||| ||||    
T  38887044 catttgggttgccttcgttgcagcctccaacaccttcattgtgttgggtgtgaaggggttgatttaatcccacattgcctagagatatga 38887133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 26639054 - 26639133
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccacaatgcct 215  Q
    |||||||||| |||| ||||||| | ||||| |||| ||||||||| |||||||||||||| |||||||||||| |||||    
T  26639054 catttgggtttccttcattgcagtccccaacaccttcattgtgttgagtgtgagggggtggatttagtcccacattgcct 26639133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 31766946 - 31767017
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||| ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  31766946 tttggtttgccttcattgcagcctccaaccccttcattgtgttggctttgagggggtggatttagtcccaca 31767017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 209
Target Start/End: Complemental strand, 23027666 - 23027593
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||| ||||||| ||||||||||| ||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  23027666 catttggcttgccttcattgcagcctcaaacaccttcattgtgttggctttgagggggtggatttagtcccaca 23027593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 20298667 - 20298604
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  20298667 gccttcattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 20298604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 21085299 - 21085236
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  21085299 gccttcattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 21085236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 23027987 - 23027916
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||| |||||||||| |||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  23027987 tttggcttgccttcattgcagccttcaacaccttcattgtgttggctttgagggggtggatttagtcccaca 23027916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 36997119 - 36997182
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||||||||| |||| |||||||||| | |||||||||||  |||||||||||    
T  36997119 gccttaattgcagcctccaacaccttcattgtgttggctttgagggggtggaattagtcccaca 36997182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 44933240 - 44933169
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||| |||||| |||||||| |||| |||||||||||| ||| ||||||| ||||||| ||||    
T  44933240 tttgggttgccttcattgcaccctccaacaccttcattgtgttgggtttgaaggggtggatttagtctcaca 44933169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 21653279 - 21653343
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtga-gggggtgggtttagtcccaca 209  Q
    ||||||||||||||||||||| |||| |||||||||| | ||| |||||||| ||||||||||||    
T  21653279 gccttaattgcagcctccaacaccttcattgtgttggctttgaggggggtggatttagtcccaca 21653343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 21653756 - 21653820
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtga-gggggtgggtttagtcccaca 209  Q
    ||||||||||||||||||||| |||| |||||||||| | ||| |||||||| ||||||||||||    
T  21653756 gccttaattgcagcctccaacaccttcattgtgttggctttgaggggggtggatttagtcccaca 21653820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 28488493 - 28488422
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtccca 207  Q
    |||||| |||||||| ||||||||||  ||| |||| |||||||||||| ||| ||||||| ||||||||||    
T  28488493 catttgagttgccttcattgcagccttaaacaccttcattgtgttgggtttgaaggggtggatttagtccca 28488422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 3184062 - 3184004
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgg 196  Q
    ||||| ||||||| ||||||||||||||| |||| |||||||||| | |||||||||||    
T  3184062 tttggtttgccttcattgcagcctccaacaccttcattgtgttggctttgagggggtgg 3184004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 15157026 - 15157098
Alignment:
Q  137 atttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||| ||||||||||||||||||   | ||  |||||||||||||||  |||||| ||||||||||||    
T  15157026 atttgggttcccttaattgcagcctccattgcgttcgttgtgttgggtgtgaaagggtggatttagtcccaca 15157098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 40754395 - 40754461
Alignment:
Q  144 ttgccttaattgcagcctccaactcctttattgtgttgggtgtga-gggggtgggtttagtcccaca 209  Q
    ||||||| ||||||||||||||| |||| |||||||||| | ||| ||||||||  |||||||||||    
T  40754395 ttgccttcattgcagcctccaacaccttcattgtgttggctttgaggggggtggacttagtcccaca 40754461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 22277475 - 22277540
Alignment:
Q  144 ttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||| ||||||||||||||| | || ||| |||||| | ||||||||||  ||||||||||||    
T  22277475 ttgccttcattgcagcctccaacactttcattttgttggctttgagggggtgaatttagtcccaca 22277540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 34529930 - 34530003
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||| |||  ||||||| |  |||| |||||||||||||| | |||| || ||||||||||||    
T  34529930 catttgggttgccttcatttaagcctcctataccttcattgtgttgggtgtaaaggggcggatttagtcccaca 34530003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 4796301 - 4796374
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||| ||||||||||||||| |||| |||||||||||||||| ||||||| ||||||| ||||    
T  4796301 catttgggttgccttcattgcagcctccaacaccttcattgtgttgggtgtgaaggggtggatttagtcacaca 4796374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 209
Target Start/End: Complemental strand, 31973595 - 31973522
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    |||||| |||||||| ||||||||||||||| |||| ||||||||||||||||  |||||| ||||||||||||    
T  31973595 catttgagttgcctttattgcagcctccaacaccttcattgtgttgggtgtgaaagggtggatttagtcccaca 31973522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 13843650 - 13843713
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  13843650 gccttaattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 13843713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 13843966 - 13844029
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  13843966 gccttaattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 13844029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 20811407 - 20811469
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccac 208  Q
    ||||||||||||||||||||| |||| |||||||||| | ||||||||||| |||||||||||    
T  20811407 gccttaattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccac 20811469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 873855 - 873784
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||| |||||||| |||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  873855 tttggtttgccttcattgcagcttccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 873784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 27760344 - 27760407
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  27760344 gccttcattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 27760407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 28010275 - 28010204
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||| |||||||||| |||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  28010275 tttggcttgccttcattgcagccttcaacaccttcattgtgttggctttgagggggtggatttagtcccaca 28010204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 20837762 - 20837824
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccac 208  Q
    |||||||||||||| |||||| |||| |||||||||| | ||||||||||| |||||||||||    
T  20837762 gccttaattgcagcatccaacaccttcattgtgttggctttgagggggtggatttagtcccac 20837824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 1028238 - 1028181
Alignment:
Q  152 attgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  1028238 attgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 1028181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 24918107 - 24918180
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||| ||||||| |||||| | |||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  24918107 catttggtttgccttcattgcaacttccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 24918180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 37995793 - 37995722
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||| ||| |||| |||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  37995793 tttggtttgccttcattccagcttccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 37995722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 27760029 - 27760091
Alignment:
Q  147 ccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    |||| ||||||||||||||| | || |||||||||| | ||||||||||| ||||||||||||    
T  27760029 ccttcattgcagcctccaacactttcattgtgttggctttgagggggtggatttagtcccaca 27760091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 209
Target Start/End: Complemental strand, 15844385 - 15844312
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    |||||||||| ||||  ||||| ||| |||| |||| ||||||||| |||||| ||||||| ||||||||||||    
T  15844385 catttgggttaccttcgttgcaacctacaacaccttcattgtgttgagtgtgaaggggtggatttagtcccaca 15844312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 24994015 - 24994088
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||| || |||| |||||| | |||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  24994015 catttggtttaccttcattgcaacttccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 24994088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 209
Target Start/End: Complemental strand, 28009958 - 28009885
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||| ||||||| ||||||||||| ||| ||||  ||||||||| | |||||| |||| ||||||||||||    
T  28009958 catttggcttgccttcattgcagcctcaaacaccttctttgtgttggctttgagggcgtggatttagtcccaca 28009885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 17016233 - 17016181
Alignment:
Q  157 agcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    |||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  17016233 agcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 17016181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 3004049 - 3003988
Alignment:
Q  155 gcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccacaatgccta 216  Q
    |||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||    
T  3004049 gcagcctccaacaccttcattgtgttgggtgtgaggggatgggtttagtcccacaatgccta 3003988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 3976622 - 3976559
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  3976622 gccttaattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 3976559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 15820260 - 15820189
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||| ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  15820260 tttggtttgcctttattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 15820189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 43169195 - 43169258
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  43169195 gccttaattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 43169258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 18183409 - 18183478
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcc 205  Q
    |||||| |||||||| ||||||||||||||| |||| |||||||||||||||| ||| ||| ||||||||    
T  18183409 catttgagttgccttcattgcagcctccaacaccttcattgtgttgggtgtgatgggatggatttagtcc 18183478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 209
Target Start/End: Complemental strand, 26760987 - 26760914
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||| || ||||| | |||| |||||||||||||| || ||| ||||||||||||||||||||    
T  26760987 catttgggttgccttgatggcagcattcaacacctttattgtgttgagtttgaaggggtgggtttagtcccaca 26760914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 18959505 - 18959577
Alignment:
Q  137 atttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||| |||| ||||||||| ||| | |||| |||||| ||||||||||||||||||||||||| ||||    
T  18959505 atttgggttcccttcattgcagccaccagcgccttcattgtgctgggtgtgagggggtgggtttagtctcaca 18959577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 3976306 - 3976243
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||||||||| |||| ||| |||||| | ||||||||||| ||||||||||||    
T  3976306 gccttaattgcagcctccaacaccttcattatgttggctttgagggggtggatttagtcccaca 3976243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 3977154 - 3977091
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||||| ||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  3977154 gccttaattgcagcctctaacaccttcattgtgttggctctgagggggtggatttagtcccaca 3977091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 18902015 - 18901952
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  18902015 gccttcattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 18901952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 21214036 - 21213973
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||| ||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  21214036 gccttaattgccgcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 21213973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 43195737 - 43195800
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||||||||| |||| |||||||||| | ||||||||| | ||||||||||||    
T  43195737 gccttaattgcagcctccaacaccttcattgtgttggctttgagggggtagatttagtcccaca 43195800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 21373926 - 21373978
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtga 188  Q
    |||||| |||||||| ||||||||||||||| || ||||||||||||||||||    
T  21373926 catttgtgttgccttcattgcagcctccaacaccattattgtgttgggtgtga 21373978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 23054282 - 23054342
Alignment:
Q  149 ttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    |||||||||||||||||| |||| | |||||||| | ||||||||||| ||||||||||||    
T  23054282 ttaattgcagcctccaacaccttcaatgtgttggctttgagggggtggatttagtcccaca 23054342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 5424915 - 5424844
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| || |||| ||||||||||||||| |||| |||||||||  | |||| |||||||||||||||||||    
T  5424915 tttggttttccttcattgcagcctccaacaccttcattgtgttgcctttgagagggtgggtttagtcccaca 5424844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 17509062 - 17509125
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||| | ||||||||||| ||||| ||||||    
T  17509062 gccttcattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagccccaca 17509125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 21214352 - 21214289
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||| ||||||||  |||| |||||||||| | ||||||||||| ||||||||||||    
T  21214352 gccttaattgccgcctccaaaaccttcattgtgttggctttgagggggtggatttagtcccaca 21214289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 11339846 - 11339777
Alignment:
Q  147 ccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccacaatgccta 216  Q
    |||| ||||||||||||||| |||| |||||||| |||| ||  |||||| |||||||||||| ||||||    
T  11339846 cctttattgcagcctccaacaccttcattgtgttaggtgcgaaagggtggatttagtcccacactgccta 11339777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 215
Target Start/End: Complemental strand, 9889487 - 9889407
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgg-gtttagtcccacaatgcct 215  Q
    ||||||||||||||| |||||| ||||| ||  ||| ||||| |||||||||| ||| |||  |||||||||||| |||||    
T  9889487 catttgggttgccttcattgcaacctccgacatcttcattgtattgggtgtgaagggatggattttagtcccacattgcct 9889407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 30166227 - 30166167
Alignment:
Q  149 ttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    |||||||||| ||||||| |||| | | |||||| | ||||||||||| ||||||||||||    
T  30166227 ttaattgcagtctccaacaccttcactatgttggctttgagggggtggatttagtcccaca 30166167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 662669 - 662741
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccac 208  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| ||||| | |||||||||||    
T  662669 catttgggttgccttcattgcagcctccaacacctttattgtgttgggtttgaaggggtcgatttagtcccac 662741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 225
Target Start/End: Original strand, 25568440 - 25568529
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccacaatgcctaaagacatga 225  Q
    ||||||||||||||  ||||||||||||||| ||||   |||||||||||||| |||||||||||||  ||||| |||||| ||||||||    
T  25568440 catttgggttgcctacattgcagcctccaacaccttctctgtgttgggtgtgaaggggtgggtttagcaccacattgcctagagacatga 25568529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 4256187 - 4256250
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||    
T  4256187 gccttcattgcagcctccaacacctttattgtgttggctttgagggggtggatttagtcccaca 4256250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 44573279 - 44573342
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  44573279 gccttaattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 44573342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 13769442 - 13769379
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  13769442 gccttcattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 13769379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 24860219 - 24860152
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcc 205  Q
    ||||| ||||||| ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||    
T  24860219 tttggtttgccttcattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcc 24860152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 41380677 - 41380740
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  41380677 gccttcattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 41380740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 43101522 - 43101459
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  43101522 gccttcattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 43101459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 45443233 - 45443296
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  45443233 gccttcattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 45443296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 50204008 - 50203945
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||| | ||||||||||||||||||| ||||    
T  50204008 gccttcattgcagcctccaacaccttcattgtgttggctttgagggggtgggtttagtctcaca 50203945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 54368992 - 54369055
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  54368992 gccttcattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 54369055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 209
Target Start/End: Complemental strand, 14170160 - 14170087
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||| ||||||| ||||||||||||| | |||| |||||||||| | ||||||| ||| ||||||||||||    
T  14170160 catttggtttgccttcattgcagcctccatcaccttcattgtgttggctttgaggggctggatttagtcccaca 14170087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 209
Target Start/End: Complemental strand, 34250513 - 34250440
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||| ||||||||||||||| |||| |||||||| ||| ||| ||||||  ||| ||||||||    
T  34250513 catttgggttgccttcattgcagcctccaacaccttaattgtgttaggtttgaaggggtgaatttcgtcccaca 34250440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 44573908 - 44573965
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagt 203  Q
    ||||||||||||||||||||| |||| |||||||||| | ||||||||||| ||||||    
T  44573908 gccttaattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagt 44573965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 3985718 - 3985789
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||| || |||||||||||| |||| | |||||||| | ||||||||||| ||||||||||||    
T  3985718 tttggtttgccttcatagcagcctccaacaccttcactgtgttggctttgagggggtggatttagtcccaca 3985789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 4255463 - 4255526
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| |||| |||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  4255463 gccttcattgtagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 4255526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 27219286 - 27219345
Alignment:
Q  150 taattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||||| |||| || ||||||| | ||||||||||| ||||||||||||    
T  27219286 taattgcagcctccaacaccttcatcgtgttggctttgagggggtggatttagtcccaca 27219345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 39225190 - 39225106
Alignment:
Q  136 catttgggttgccttaattgcagcctccaact----cctttattgtgttgggtgtgagggggtgggtttagtcccacaatgccta 216  Q
    ||||||||||||||| | |||||||||||||     |||| |||||||||||||||| || |||||||||||||| || ||||||    
T  39225190 catttgggttgccttcactgcagcctccaacatacaccttcattgtgttgggtgtgaaggcgtgggtttagtcccgcattgccta 39225106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 54861473 - 54861536
Alignment:
Q  141 gggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtc 204  Q
    |||||| ||| ||||||||||||||| ||||  ||||||||||||||| ||||||| |||||||    
T  54861473 gggttgtcttcattgcagcctccaacaccttcgttgtgttgggtgtgaaggggtggatttagtc 54861536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 44573595 - 44573655
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||||||||| ||   |||||||||| | ||||||||||| ||||||||||||    
T  44573595 gccttaattgcagcctccaacacc---attgtgttggctttgagggggtggatttagtcccaca 44573655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 51917823 - 51917903
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccacaatgccta 216  Q
    ||||||||||||||| |||||| ||| |||| |||| ||| ||||| ||||||  |||||| |||||||| ||| ||||||    
T  51917823 catttgggttgccttcattgcaaccttcaacgccttcattatgttgagtgtgaaagggtggatttagtcctacattgccta 51917903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 34715606 - 34715543
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| || |||||||||||| |||| | |||||||| | ||||||||||| ||||||||||||    
T  34715606 gccttcatcgcagcctccaacaccttcactgtgttggctttgagggggtggatttagtcccaca 34715543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 48685463 - 48685405
Alignment:
Q  152 attgcagcctccaactcctttattgtgttgggtgtga-gggggtgggtttagtcccaca 209  Q
    ||||||||||||||| |||| |||||||||| | ||| |||||||| ||||||||||||    
T  48685463 attgcagcctccaacaccttcattgtgttggctttgaggggggtggatttagtcccaca 48685405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 991157 - 991220
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  991157 gccttaattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 991220  T

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Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 50857965 - 50858028
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  50857965 gccttaattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 50858028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 50858281 - 50858344
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  50858281 gccttaattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 50858344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 53738367 - 53738296
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||| ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  53738367 tttggtttgccttcattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 53738296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 53740135 - 53740198
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  53740135 gccttaattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 53740198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 30491108 - 30491043
Alignment:
Q  140 tgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcc 205  Q
    ||||||||||| ||||||||||||||| |||| | |||||||||||||| ||||||| ||||||||    
T  30491108 tgggttgccttcattgcagcctccaacaccttcaatgtgttgggtgtgaaggggtggatttagtcc 30491043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 15665097 - 15665169
Alignment:
Q  138 tttgggtt-gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    |||||||| ||||| ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  15665097 tttgggttagccttcattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 15665169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 990500 - 990563
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||||||||| |||| |||||||||| | ||||||||||  ||||||||||||    
T  990500 gccttaattgcagcctccaacaccttcattgtgttggctttgagggggtgaatttagtcccaca 990563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 990991 - 991050
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcc 205  Q
    ||||||||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||    
T  990991 gccttaattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcc 991050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 45427403 - 45427340
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  45427403 gccttcattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 45427340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 52214568 - 52214631
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||||||||| |||| |||||||||| | |||||||||||  |||||||||||    
T  52214568 gccttaattgcagcctccaacaccttcattgtgttggctttgagggggtggaattagtcccaca 52214631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 43972306 - 43972371
Alignment:
Q  144 ttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||| ||||||||||||||| |||| |||||||||| | ||||||||||  ||||||||||||    
T  43972306 ttgccttcattgcagcctccaacaccttcattgtgttggttttgagggggtgaatttagtcccaca 43972371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 26942747 - 26942679
Alignment:
Q  137 atttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcc 205  Q
    |||||||||| ||| |||||| |||||||| | || |||||||||||||||| ||||||| ||||||||    
T  26942747 atttgggttgtcttcattgcaacctccaacacattcattgtgttgggtgtgaaggggtggatttagtcc 26942679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 52043238 - 52043155
Alignment:
Q  137 atttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccacaatgcctaaaga 220  Q
    ||||| |||| ||| ||||||||||||||| |||| ||||| | |||||||| ||||||| ||||||| |||| |||| |||||    
T  52043238 atttgtgttgtcttcattgcagcctccaacaccttcattgtatcgggtgtgaaggggtggatttagtctcacattgccaaaaga 52043155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 56509554 - 56509621
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcc 205  Q
    ||||| ||||||| |||||||| |||||| |||| |||||||||| | ||||||||||| ||||||||    
T  56509554 tttggtttgccttcattgcagcttccaacaccttcattgtgttggctttgagggggtggatttagtcc 56509621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 208
Target Start/End: Original strand, 43971984 - 43972054
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccac 208  Q
    ||||| || |||| ||||||||||||||| |||| |||||||||| | | ||||||||| |||||||||||    
T  43971984 tttggtttaccttcattgcagcctccaacaccttcattgtgttggctttaagggggtggatttagtcccac 43972054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 44898883 - 44898834
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtg 185  Q
    |||||||| |||||| ||||||||||||||| |||| |||||||||||||    
T  44898883 catttgggctgccttcattgcagcctccaacaccttcattgtgttgggtg 44898834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 45427081 - 45427024
Alignment:
Q  152 attgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||| |||| |||||||||| | ||||||||||| ||||| ||||||    
T  45427081 attgcagcctccaacaccttcattgtgttggctttgagggggtggatttagccccaca 45427024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 48046299 - 48046380
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtg-agggggtgggtttagtcccacaatgccta 216  Q
    |||| |||||||||| |||||| |||||||| |||| | | ||||||||||| | ||||||| |||||||||||| ||||||    
T  48046299 cattggggttgccttcattgcaacctccaacaccttcactatgttgggtgtgaaaggggtggatttagtcccacattgccta 48046380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 209
Target Start/End: Complemental strand, 26943031 - 26942959
Alignment:
Q  137 atttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    |||||| ||| ||| |||||||||| |||| ||||||||||||||||||||| | ||||  ||||||| ||||    
T  26943031 atttggattgtcttcattgcagccttcaacacctttattgtgttgggtgtgaagaggtgaatttagtctcaca 26942959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 29669513 - 29669451
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||| | ||| ||||||| ||||||||||||    
T  29669513 gccttcattgcagcctccaacaccttcattgtgttggctttga-ggggtggatttagtcccaca 29669451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 29669828 - 29669766
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||| | ||| ||||||| ||||||||||||    
T  29669828 gccttcattgcagcctccaacaccttcattgtgttggctttga-ggggtggatttagtcccaca 29669766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 29734514 - 29734577
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||  | ||||||||||  ||||||||||||    
T  29734514 gccttcattgcagcctccaacaccttcattgtgttgactttgagggggtgaatttagtcccaca 29734577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 32988421 - 32988358
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||| ||||| |||| |||||||||| | ||||| ||||| ||||||||||||    
T  32988421 gccttcattgcagcccccaacaccttcattgtgttggctttgaggtggtggatttagtcccaca 32988358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 36558625 - 36558554
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||| || ||| |||||||| |||| | |||||||| | ||||||||||| ||||||||||||    
T  36558625 tttggtttgccttcatagcaacctccaacaccttcactgtgttggctttgagggggtggatttagtcccaca 36558554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 22867035 - 22867099
Alignment:
Q  144 ttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccac 208  Q
    ||||||| |||||||| |||||| ||||  ||||| ||| | ||||||||||| |||||||||||    
T  22867035 ttgccttcattgcagcttccaacaccttcgttgtgctggctttgagggggtggatttagtcccac 22867099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 23311629 - 23311562
Alignment:
Q  137 atttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcc 205  Q
    |||||| |||||||  |||||||||||||| |||||  |||||||||| ||| ||||||| ||||||||    
T  23311629 atttggtttgccttctttgcagcctccaacaccttt-gtgtgttgggtttgaaggggtggatttagtcc 23311562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 26942532 - 26942464
Alignment:
Q  137 atttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcc 205  Q
    |||||||||| ||| |||||| |||||||| | || |||||||||||| ||| ||||||| ||| ||||    
T  26942532 atttgggttgtcttcattgcaacctccaacacattcattgtgttgggtatgaaggggtggattttgtcc 26942464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 46332694 - 46332622
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccac 208  Q
    ||||||||||||||| |||||||||| |||| | || ||||  |||||| | | ||||||| |||||||||||    
T  46332694 catttgggttgccttcattgcagccttcaacacgttcattggattgggttttaaggggtggatttagtcccac 46332622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 10418489 - 10418426
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  10418489 gccttcattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 10418426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 24055260 - 24055197
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  24055260 gccttcattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 24055197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 9602148 - 9602078
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtccc 206  Q
    ||||||| ||||||| ||| |||| |||||| |||| |||||||||||||||| ||||||| |||||||||    
T  9602148 catttggattgccttcattccagcttccaacaccttcattgtgttgggtgtgaaggggtggatttagtccc 9602078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 1206025 - 1205956
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcc 205  Q
    ||||||||||||||| ||||||||||||| | |||| || ||||| ||||||| ||||||| ||||||||    
T  1206025 catttgggttgccttcattgcagcctccagcaccttcatcgtgttaggtgtgaaggggtggatttagtcc 1205956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 1408970 - 1409027
Alignment:
Q  152 attgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||| |||| |||||||||| | ||||||||||| ||||||||||||    
T  1408970 attgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccaca 1409027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 16509719 - 16509808
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttatt-gtgttgggtgtgagggggtgggtttagtcccacaatgcctaaagacatg 224  Q
    ||||||||||||||| |||||||| | |||| |||| ||| ||| ||| |||||  |||||| |||||||||||| ||||||||||||||    
T  16509719 catttgggttgccttcattgcagctttcaacgccttcatttgtgatggatgtgaacgggtggatttagtcccacattgcctaaagacatg 16509808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 1205711 - 1205639
Alignment:
Q  136 catttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccac 208  Q
    |||||||||| |||| |||||||||| |||| | || |||||||||||||||| ||||||| || ||||||||    
T  1205711 catttgggtttccttcattgcagcctacaacactttcattgtgttgggtgtgaaggggtggattcagtcccac 1205639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 130824 - 130761
Alignment:
Q  141 gggttgccttaattgcagcctccaact-cctttattgtgttgggtgtgagggggtgggtttagt 203  Q
    |||||||||| |||||||||||||||  |||| |||||||||||||||| ||||||| ||||||    
T  130824 gggttgccttcattgcagcctccaacaaccttcattgtgttgggtgtgaaggggtggatttagt 130761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 19054446 - 19054509
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||||| | |||||||||||  |||||||||||    
T  19054446 gccttcattgcagcctccaacaccttcattgtgttggctttgagggggtggaattagtcccaca 19054509  T

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Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 21043932 - 21043871
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtccca 207  Q
    ||||| ||||||||||||||| |||| |||||||| | | ||||||||||| ||||||||||    
T  21043932 gccttcattgcagcctccaacaccttcattgtgtttgctttgagggggtggatttagtccca 21043871  T

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Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 21067208 - 21067147
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtccca 207  Q
    ||||| ||||||||||||||| |||| |||||||| | | ||||||||||| ||||||||||    
T  21067208 gccttcattgcagcctccaacaccttcattgtgtttgctttgagggggtggatttagtccca 21067147  T

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Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 21088999 - 21088938
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtccca 207  Q
    ||||| ||||||||||||||| |||| |||||||| | | ||||||||||| ||||||||||    
T  21088999 gccttcattgcagcctccaacaccttcattgtgtttgctttgagggggtggatttagtccca 21088938  T

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Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 32215853 - 32215922
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtccca 207  Q
    ||||| ||||||| ||||||||||||||| |||| ||| |||||| | |||| |||||| ||||||||||    
T  32215853 tttggtttgccttcattgcagcctccaacaccttcattatgttggttttgagagggtggatttagtccca 32215922  T

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Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 10733582 - 10733526
Alignment:
Q  153 ttgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||||||||||||  ||| |||||||||| | ||||||||||| ||||||||||||    
T  10733582 ttgcagcctccaacatcttcattgtgttggctttgagggggtggatttagtcccaca 10733526  T

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Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 1744993 - 1744930
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||||||||||| |||| |||||||| | | |||||||||||  |||||||||||    
T  1744993 gccttcattgcagcctccaacaccttcattgtgtttgctttgagggggtggagttagtcccaca 1744930  T

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Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 12134642 - 12134571
Alignment:
Q  138 tttgggttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| ||||||| ||||||||||||||  |||| |||||||||| | ||| |||||||  |||||||||||    
T  12134642 tttggtttgccttcattgcagcctccaataccttcattgtgttggctttgacggggtggacttagtcccaca 12134571  T

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Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 19753755 - 19753692
Alignment:
Q  146 gccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcccaca 209  Q
    ||||| |||||||||| |||| |||| |||||||| | | ||||||||||| ||||||||||||    
T  19753755 gcctttattgcagcctgcaacaccttcattgtgttagctttgagggggtggatttagtcccaca 19753692  T

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Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 32027 - 31965
Alignment:
Q  143 gttgccttaattgcagcctccaactcctttattgtgttgggtgtgagggggtgggtttagtcc 205  Q
    |||||||| ||||||| ||||||| |||| ||| |||||| | ||||||||||| ||||||||    
T  32027 gttgccttcattgcagtctccaacaccttcattttgttggctttgagggggtggatttagtcc 31965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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