View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0809_low_167 (Length: 252)
Name: NF0809_low_167
Description: NF0809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0809_low_167 |
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Alignment Details
Target: chr8 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 8 - 241
Target Start/End: Original strand, 5417352 - 5417581
Alignment:
| Q |
8 |
cgaataatataaattcatgttttcttttnnnnnnnntctctaattgaagtaagactgatactacaattgaatattgtcgaatatgactcatagaagtaat |
107 |
Q |
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| T |
5417352 |
cgaataatataaattcatgttttctttaaaaaaaattctttaattaaagtaagactgatactacacttgaatattgtcgaatatgactcatagaagtaat |
5417451 |
T |
|
| Q |
108 |
gctgcaatccaaacgacatgtattttaatacaagttgtacactattgtaaacctatgacattgaaataattgaatatttatattaatttgtaatgcacgg |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||| |
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| T |
5417452 |
gctgcaatccaaacgacatgtattttaatacaagttgtacactatcgtaaacctatgccattgaaataattgaa----tatattaatttgtaatgcacgg |
5417547 |
T |
|
| Q |
208 |
tcgatacacattatatataaaattcaattgtaaa |
241 |
Q |
| |
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|||||||||||||||||||||||||||||||||| |
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| T |
5417548 |
tcgatacacattatatataaaattcaattgtaaa |
5417581 |
T |
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