View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0809_low_184 (Length: 251)
Name: NF0809_low_184
Description: NF0809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0809_low_184 |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 7329868 - 7330088
Alignment:
| Q |
1 |
acgaatcttacaatgaaccataacagtagcaaaaactataaatgcagcactttaatctacatagaaaagcctcaaacgacaatccctacagtagaaaaac |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
7329868 |
acgaatcttacaatgaaccataacagtagcaaaaactataaatgcagcactttaatctacatagaaaagcctcaaacgacaatccctacagtagaaaaac |
7329967 |
T |
|
| Q |
101 |
cgcgccttcacctgagaattccagtagaaaaagacagtccaggtctggttctctcccctgaacacagcagaacacaacaactataactcactacctccca |
200 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7329968 |
cgcgccttcacctgagaattccagcagaaaaagacagtccaggtctggttctctcccctgaacacagcagaacacaacaactataactcactacctccca |
7330067 |
T |
|
| Q |
201 |
aacctaaaaacagtgaacaca |
221 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
7330068 |
aacctaaaaacagtgaacaca |
7330088 |
T |
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