View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0809_low_61 (Length: 428)

Name: NF0809_low_61
Description: NF0809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0809_low_61
NF0809_low_61
[»] chr5 (19 HSPs)
chr5 (30-344)||(30346608-30346922)
chr5 (30-339)||(24629930-24630239)
chr5 (30-344)||(10024904-10025218)
chr5 (30-315)||(25542886-25543171)
chr5 (30-315)||(14192905-14193190)
chr5 (29-315)||(27880924-27881210)
chr5 (29-315)||(8428667-8428953)
chr5 (29-315)||(37372776-37373062)
chr5 (29-315)||(39883023-39883309)
chr5 (30-316)||(37261156-37261442)
chr5 (30-313)||(3689818-3690101)
chr5 (30-313)||(3876686-3876969)
chr5 (30-209)||(6089051-6089230)
chr5 (177-315)||(17871730-17871868)
chr5 (29-150)||(4051646-4051767)
chr5 (30-150)||(15032839-15032959)
chr5 (29-150)||(30314037-30314158)
chr5 (30-149)||(2261273-2261392)
chr5 (113-141)||(15032720-15032748)
[»] chr7 (8 HSPs)
chr7 (30-344)||(42231925-42232239)
chr7 (37-315)||(21070155-21070433)
chr7 (30-315)||(5828648-5828933)
chr7 (29-315)||(9001238-9001524)
chr7 (29-315)||(12781241-12781528)
chr7 (29-312)||(7036560-7036843)
chr7 (29-315)||(12786071-12786358)
chr7 (177-315)||(22843792-22843930)
[»] chr4 (10 HSPs)
chr4 (30-344)||(55559102-55559416)
chr4 (30-315)||(1860518-1860803)
chr4 (29-315)||(49710013-49710299)
chr4 (29-315)||(35855747-35856033)
chr4 (29-315)||(38517936-38518222)
chr4 (29-315)||(49786921-49787207)
chr4 (30-150)||(787721-787841)
chr4 (30-141)||(31921314-31921425)
chr4 (274-315)||(13337320-13337361)
chr4 (113-141)||(787932-787960)
[»] chr1 (12 HSPs)
chr1 (30-339)||(52500510-52500819)
chr1 (30-315)||(2329010-2329295)
chr1 (29-315)||(16041865-16042151)
chr1 (30-315)||(18148529-18148814)
chr1 (29-315)||(6311087-6311374)
chr1 (30-315)||(2453210-2453493)
chr1 (29-315)||(37390245-37390524)
chr1 (30-315)||(36207056-36207341)
chr1 (30-315)||(48238570-48238855)
chr1 (30-313)||(48775430-48775713)
chr1 (29-150)||(25074113-25074234)
chr1 (54-91)||(12451185-12451222)
[»] scaffold0118 (1 HSPs)
scaffold0118 (30-344)||(28698-29012)
[»] chr2 (12 HSPs)
chr2 (30-315)||(24269163-24269448)
chr2 (30-315)||(17683922-17684207)
chr2 (30-315)||(27509215-27509500)
chr2 (29-315)||(21395210-21395496)
chr2 (30-315)||(35609526-35609811)
chr2 (30-315)||(27192330-27192615)
chr2 (30-315)||(27842144-27842429)
chr2 (29-315)||(41920266-41920552)
chr2 (29-315)||(28666265-28666552)
chr2 (29-315)||(37825099-37825386)
chr2 (176-315)||(24245812-24245951)
chr2 (30-121)||(24245693-24245784)
[»] chr8 (9 HSPs)
chr8 (30-315)||(21113837-21114122)
chr8 (29-315)||(25218658-25218944)
chr8 (29-315)||(25209125-25209411)
chr8 (29-315)||(30307017-30307303)
chr8 (29-315)||(31978620-31978906)
chr8 (29-315)||(7821678-7821964)
chr8 (30-141)||(33861647-33861758)
chr8 (30-149)||(14714106-14714225)
chr8 (32-92)||(14767406-14767466)
[»] scaffold0262 (1 HSPs)
scaffold0262 (30-315)||(18847-19132)
[»] scaffold0134 (1 HSPs)
scaffold0134 (30-312)||(5355-5637)
[»] chr6 (11 HSPs)
chr6 (30-315)||(2202272-2202557)
chr6 (30-315)||(10187385-10187670)
chr6 (29-315)||(12517228-12517514)
chr6 (30-315)||(18343966-18344251)
chr6 (29-315)||(15333482-15333769)
chr6 (82-315)||(31510292-31510525)
chr6 (82-315)||(29640121-29640355)
chr6 (177-315)||(30881315-30881453)
chr6 (30-150)||(12519448-12519568)
chr6 (29-87)||(29641668-29641726)
chr6 (29-87)||(31511832-31511890)
[»] chr3 (15 HSPs)
chr3 (31-315)||(10110442-10110726)
chr3 (30-315)||(10000248-10000533)
chr3 (30-315)||(10237398-10237681)
chr3 (30-315)||(10968874-10969159)
chr3 (30-315)||(50410013-50410298)
chr3 (30-315)||(10038481-10038766)
chr3 (30-315)||(46912912-46913197)
chr3 (30-313)||(11368487-11368771)
chr3 (31-314)||(47692811-47693094)
chr3 (30-315)||(11362099-11362385)
chr3 (31-315)||(13529882-13530165)
chr3 (76-315)||(32658-32897)
chr3 (117-315)||(52917994-52918192)
chr3 (30-141)||(41763629-41763740)
chr3 (32-92)||(15328879-15328939)
[»] scaffold0017 (1 HSPs)
scaffold0017 (30-315)||(186398-186680)
[»] scaffold0356 (1 HSPs)
scaffold0356 (30-307)||(17970-18247)
[»] scaffold0073 (2 HSPs)
scaffold0073 (29-315)||(19297-19583)
scaffold0073 (29-315)||(31773-32058)
[»] scaffold0002 (1 HSPs)
scaffold0002 (29-315)||(321429-321715)
[»] scaffold0550 (1 HSPs)
scaffold0550 (29-315)||(665-951)
[»] scaffold0003 (2 HSPs)
scaffold0003 (30-313)||(182652-182935)
scaffold0003 (30-315)||(165371-165657)
[»] scaffold0090 (1 HSPs)
scaffold0090 (29-315)||(49029-49316)
[»] scaffold1139 (1 HSPs)
scaffold1139 (30-315)||(841-1126)
[»] scaffold0888 (1 HSPs)
scaffold0888 (30-286)||(24-280)
[»] scaffold0025 (1 HSPs)
scaffold0025 (30-315)||(16526-16810)
[»] scaffold1424 (2 HSPs)
scaffold1424 (113-244)||(1572-1703)
scaffold1424 (30-83)||(1522-1575)
[»] scaffold0012 (1 HSPs)
scaffold0012 (30-149)||(97082-97201)
[»] scaffold0022 (1 HSPs)
scaffold0022 (30-141)||(126070-126181)


Alignment Details
Target: chr5 (Bit Score: 299; Significance: 1e-168; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 30 - 344
Target Start/End: Complemental strand, 30346922 - 30346608
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30346922 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 30346823  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30346822 taataccattaaggaattccgttgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 30346723  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaataatcttcaggaattt 329  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30346722 acctggaatcagtgacatcatatattcgttaacatgttcaacttaatcaagtgttggtgcgagtattcccctttcttggaaaaataatcttcaggaattt 30346623  T
Q  330 ctaccttcatctcac 344  Q
    |||||||||| ||||    
T  30346622 ctaccttcatttcac 30346608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 30 - 339
Target Start/End: Complemental strand, 24630239 - 24629930
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24630239 gtaccattacacagtccattggcctgatcgatgtttctcatcagcacaactggacatcccacctttagtttcaaccggtgatttggaattccaaagctct 24630140  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24630139 taataccattaaggaattccgttgtgaaccgctcattttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 24630040  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaataatcttcaggaattt 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24630039 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaataatcttcaggaattt 24629940  T
Q  330 ctaccttcat 339  Q
    ||||||||||    
T  24629939 ctaccttcat 24629930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 30 - 344
Target Start/End: Original strand, 10024904 - 10025218
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10024904 gtaccattacacagttcattggcctgatccatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaataccagagctct 10025003  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10025004 taataccattaaggaattccgttgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 10025103  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaataatcttcaggaattt 329  Q
    || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10025104 acttggaatcaatgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaataatctttaggaattt 10025203  T
Q  330 ctaccttcatctcac 344  Q
    |||||||||| ||||    
T  10025204 ctaccttcatttcac 10025218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 30 - 315
Target Start/End: Complemental strand, 25543171 - 25542886
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25543171 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacccttagtttcaaccggtgatttggaattccagagctct 25543072  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    |||||||||||||||||| | ||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  25543071 taataccattaaggaatttcgttgtgaaccactcgctttggacatcataattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttc 25542972  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25542971 acctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 25542886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 30 - 315
Target Start/End: Complemental strand, 14193190 - 14192905
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  14193190 gtaccactacacagtccattggcctgatcaatgtttctcatcagcataactggacatccaacccttagtttcaaccggtgatttggaattccagagctct 14193091  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||| | |||||| | ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  14193090 taataccattacgaaattccgtcgtgaaccactcgctttggacatcagaattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttc 14192991  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14192990 acctggaatcagtgacatcatatattcgttaacatgctcaactgaattaagcgttggtgcgagtattcccctttcttggaaaaata 14192905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 29 - 315
Target Start/End: Original strand, 27880924 - 27881210
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27880924 agtaccattacacagtccattagcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaacctgtgatttggaattccagagctc 27881023  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    |||||||||||||| ||||||| |||||||||||| |||||||||||| ||||||||||||| | ||||| |||||||||| ||||||||||||||||||    
T  27881024 ttaataccattaagaaattccagtgtgaaccactcgctttggacatcataattttcacccgatctacaaatagaatcagagcttaaatactctttctctt 27881123  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||| ||||||||| ||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  27881124 cacttggaatcagcgacatcataaattcgttaacatgctcagctgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 27881210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 29 - 315
Target Start/End: Complemental strand, 8428953 - 8428667
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8428953 agtaccattacacagtccattggcctgatcgatgtttctcaacagcataactggacatcccacctttagtttcaacctgtgatttggaattccagagctc 8428854  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    |||||||||||||| |||||   |||||||||||| |||||||||||||||| ||||||||| | | ||| |||||||||| ||||||||||||||||||    
T  8428853 ttaataccattaagaaattctggtgtgaaccactcgctttggacatcagaatattcacccgatctaaaaatagaatcagaggttaaatactctttctctt 8428754  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||| ||||||||| ||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||    
T  8428753 cacctggaatcagcgacatcataaattcgttaacatgctcaattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaata 8428667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 29 - 315
Target Start/End: Original strand, 37372776 - 37373062
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  37372776 agtaccattacacagtccattggcctaatcgatgtttctcatcagcataactggacatcccacctttagtttcaacctgtgatttggaattccaaagctc 37372875  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    |||||||||||||| |||||   |||||||||||| ||||||||||||||||| |||||||| | | ||| |||||||||| ||||||||||||||||||    
T  37372876 ttaataccattaagaaattctggtgtgaaccactcgctttggacatcagaattatcacccgatctaaaaatagaatcagagcttaaatactctttctctt 37372975  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37372976 cacctggaatcagtgacatcataaattggttaacatgctcaactgaatcaagcgttggtgcgagtattcccctttcttcgaaaaata 37373062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 29 - 315
Target Start/End: Original strand, 39883023 - 39883309
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  39883023 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttaatttcaacatgtgatttggaattccagagctc 39883122  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    |||||||||||||| ||||||  |||||||||||| |||||||||||| |||| |||||||| | |||||||||||||||| ||||||||||||||||||    
T  39883123 ttaataccattaagaaattccgatgtgaaccactcgctttggacatcataattgtcacccgatctacaaacagaatcagagcttaaatactctttctctt 39883222  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||| ||||||||  ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39883223 cacttggaatcaacgacatcataaattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcccctttcttggcaaaata 39883309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 30 - 316
Target Start/End: Original strand, 37261156 - 37261442
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37261156 gtaccactacatagtccattggcctgatcaatgtttctcatcagcataactggacatcccacccttagtttcaaccggtgatttggaattccagagctct 37261255  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| |||||| |||||||||| || |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||| |||||||||    
T  37261256 taataccattaagaaattcctttgtgaaccattcgctttggacatcaaaattttcacccgatcgacaaacagaatcagagcttaaatactatttctcttc 37261355  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaataa 316  Q
    ||||||||||||||||||||||||||| |||| ||| |||||||||||||| ||||| || ||||||||||||||||| ||||||||    
T  37261356 acctggaatcagtgacatcatatattcattaatatgctcaactgaatcaagtgttggcgcaagtattcccctttcttgaaaaaataa 37261442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 30 - 313
Target Start/End: Original strand, 3689818 - 3690101
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3689818 gtaccattacacagtccattgacctgatcgatgtttctcatcagcataactggacatcccaccattagtttcaaccggtgatttggaattccagagctct 3689917  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| |||||| ||||||||||||| || | || |||||||||||| ||||| |||||||| ||||||||| ||||||||||||||||| |    
T  3689918 taataccattaagaaattccgttgtgaaccactcgctctagagatcagaattttcgcccgatcgacaaactgaatcagagcttaaatactctttctctcc 3690017  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaa 313  Q
    || |||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| | ||||||| |||||    
T  3690018 acttggaatcactgacatcatatattcgttaacatgctcaaccgaatcaagcgttggtgcgagtattcacttttcttgaaaaaa 3690101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 30 - 313
Target Start/End: Complemental strand, 3876969 - 3876686
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3876969 gtaccattacacagtccattgacctgatcgatgtttctcatcagcataactggacatcccaccattagtttcaaccggtgatttggaattccagagctct 3876870  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| |||||| ||||||||||||| || | || |||||||||||| ||||| |||||||| ||||||||| ||||||||||||||||| |    
T  3876869 taataccattaagaaattccgttgtgaaccactcgctctagagatcagaattttcgcccgatcgacaaactgaatcagagcttaaatactctttctctcc 3876770  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaa 313  Q
    || |||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| | ||||||| |||||    
T  3876769 acttggaatcactgacatcatatattcgttaacatgctcaaccgaatcaagcgttggtgcgagtattcacttttcttgaaaaaa 3876686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 30 - 209
Target Start/End: Original strand, 6089051 - 6089230
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||| ||| ||||||||||    
T  6089051 gtaccattacacagttcattggcctgatcgatgtttctcatcagcataactggacatcccacccttagtttcaactagtgatttgaaatcccagagctct 6089150  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagag 209  Q
    ||||||||||||| |||||| ||||||||||||||| ||||| || | ||||||||||||| ||||||||||||||||||    
T  6089151 taataccattaagaaattccgttgtgaaccactcaccttggatattaaaattttcacccgatcgacaaacagaatcagag 6089230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 177 - 315
Target Start/End: Complemental strand, 17871868 - 17871730
Alignment:
Q  177 gaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttcaactgaat 276  Q
    |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  17871868 gaattttcacccgatcgacaaacagaaccagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaacagaat 17871769  T
Q  277 caagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  17871768 caagcgttggtgcgagtatttccctttcttggaaaaata 17871730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 4051646 - 4051767
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    ||||| ||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4051646 agtactattacacagtccatttgtctgatcgatgtttctcatcagcataattggacatcccacccttagtttcaaccggtgatttggaattccagagctc 4051745  T
Q  129 ttaataccattaaggaattcca 150  Q
    |||||||||||||| |||||||    
T  4051746 ttaataccattaagaaattcca 4051767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 15032959 - 15032839
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||| ||||||||||||| ||||||||    
T  15032959 gtaccattacacggtccattggcctgatcgatgtttctcatcagcataattggacatcacacccttagtttcaaccgatgatttggaattctagagctct 15032860  T
Q  130 taataccattaaggaattcca 150  Q
    ||||||||||||| |||||||    
T  15032859 taataccattaagaaattcca 15032839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 30314037 - 30314158
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    ||||| ||||||||||||||| |  ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||| ||    
T  30314037 agtactattacacagtccatttgtttgatcgatgtttctcatcagcataattggacatcccacccttagtttcaatcggtgatttggaattccagaggtc 30314136  T
Q  129 ttaataccattaaggaattcca 150  Q
    |||||||||| ||| |||||||    
T  30314137 ttaataccatgaagaaattcca 30314158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 2261392 - 2261273
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||||||| |||||| ||| ||| ||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||| ||| ||||||    
T  2261392 gtaccattacacagaccattgacctcatcaatgtttctcatcagcctaactggacatcccacccttagtttcaacctgtgatttggaatgccaaagctct 2261293  T
Q  130 taataccattaaggaattcc 149  Q
    ||||||||||||| ||||||    
T  2261292 taataccattaagaaattcc 2261273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 141
Target Start/End: Complemental strand, 15032748 - 15032720
Alignment:
Q  113 tggaattccagagctcttaataccattaa 141  Q
    |||||||||||||||||||||||||||||    
T  15032748 tggaattccagagctcttaataccattaa 15032720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 291; Significance: 1e-163; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 30 - 344
Target Start/End: Original strand, 42231925 - 42232239
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42231925 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 42232024  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
     ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42232025 aaataccattaaggaattcagttgtgaaccactcactttggacatcagaattttcacccgagcgacaaacaaaatcagagtttaaatactctttctcttc 42232124  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaataatcttcaggaattt 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42232125 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgagagtattcccctttcttggaaaaataatcttcaggaattt 42232224  T
Q  330 ctaccttcatctcac 344  Q
    |||||||||| ||||    
T  42232225 ctaccttcatttcac 42232239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 37 - 315
Target Start/End: Complemental strand, 21070433 - 21070155
Alignment:
Q  37 tacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctcttaatacc 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  21070433 tacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacccttagtttcaaccggtgatttggaatttcagagctcttaatacc 21070334  T
Q  137 attaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctgga 236  Q
    |||||| |||||| |||||||||||||||||||||||||  ||||||||||||| | |||||||||||||||| |||||||||||||||||||||| |||    
T  21070333 attaagaaattccgttgtgaaccactcactttggacatctaaattttcacccgatcaacaaacagaatcagagcttaaatactctttctcttcaccagga 21070234  T
Q  237 atcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21070233 atcagtgacatcatatattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 21070155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 30 - 315
Target Start/End: Complemental strand, 5828933 - 5828648
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5828933 gtaccattacgcagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctctagtttcaaccggtgatttggaattccagagctct 5828834  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| |||| || |||||||||||| |||||||||||| ||||||||||||| | |||||||||||||||| |||||||||||||||||||    
T  5828833 taataccattaagaaattacaatgtgaaccactcgctttggacatcataattttcacccgatctacaaacagaatcagagcttaaatactctttctcttc 5828734  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  5828733 acctggaatcagtgacatcatatattcgttaacatgctcaactgagtcaagtgttggtgcgagtattcccctttcttggaaaaata 5828648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 29 - 315
Target Start/End: Complemental strand, 9001524 - 9001238
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||    
T  9001524 agtaccattacgcagtccattggcctgatcgatgtttctcatcagcataactggatatcccacctttagtttcaacctgtgatttggaatttcagagctc 9001425  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    |||||||||||||| ||||||  |||||||||||| |||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||    
T  9001424 ttaataccattaagaaattccggtgtgaaccactcgctttggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctctt 9001325  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||| ||||||| ||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9001324 cacctagaatcagcgacatcataaattcgttaacatgctcaactgaatcaagcgttagtgcgagtattcccctttcttggaaaaata 9001238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 29 - 315
Target Start/End: Complemental strand, 12781528 - 12781241
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||    
T  12781528 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccaccattagtttcaacctgtgatttggaattccatagctc 12781429  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagc-gacaaacagaatcagagtttaaatactctttctct 227  Q
    |||||||||||||| |||||   |||||||||||| |||||||||||||||||||||||||| |  | ||| |||||||||| |||||||||||||||||    
T  12781428 ttaataccattaagaaattctggtgtgaaccactcgctttggacatcagaattttcacccgatctcaaaaatagaatcagaggttaaatactctttctct 12781329  T
Q  228 tcacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12781328 tcacctggaatcagcgacatcataaattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 12781241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 29 - 312
Target Start/End: Original strand, 7036560 - 7036843
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||    
T  7036560 agtaccattacacagtccattgccttgatcgatgtttctcatcagcataaccggacatcccacctttagtttcaacctgtgatttggaattccaaagctc 7036659  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    |||||||||||||| |||||   |||||||||||| |||||||||||||||||||||||||| | | ||| |||||||||| ||||||||||||||||||    
T  7036660 ttaataccattaagaaattctggtgtgaaccactcgctttggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctctt 7036759  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaa 312  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7036760 cacctggaatcagcgacatcataaattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaa 7036843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 29 - 315
Target Start/End: Complemental strand, 12786358 - 12786071
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccaccttt-agtttcaaccggtgatttggaattccagagct 127  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  12786358 agtaccattacacagtccattggcctgatcgatgtttctcaacagcataactggacatcccaccttttagtttcaacctgtgatttggaattccagagct 12786259  T
Q  128 cttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctct 227  Q
    ||||||||||||||| |||||   |||||||||||| ||||||||||||||||||||||| || | | ||| |||||||||| |||||||||||||||||    
T  12786258 cttaataccattaagaaattctggtgtgaaccactcgctttggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctct 12786159  T
Q  228 tcacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||| ||||||| ||||||||| ||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||    
T  12786158 tcacctagaatcagcgacatcataaattcgttaacatgctcaattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaata 12786071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 177 - 315
Target Start/End: Original strand, 22843792 - 22843930
Alignment:
Q  177 gaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttcaactgaat 276  Q
    |||||||||||||| |||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  22843792 gaattttcacccgatcgacaaacagaaacagaacttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaacagaat 22843891  T
Q  277 caagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22843892 caagcgttggtgcgagtattcccctttcttggaaaaata 22843930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 291; Significance: 1e-163; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 30 - 344
Target Start/End: Complemental strand, 55559416 - 55559102
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  55559416 gtaccattacacagtccattggcctgatcgatgtttctcatcaacataactggacatcccacctttagtttcaaccggtgatttgaaattccagagctct 55559317  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
     ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55559316 aaataccattaaggaattcagttgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 55559217  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaataatcttcaggaattt 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55559216 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaataatcttcaggaattt 55559117  T
Q  330 ctaccttcatctcac 344  Q
    |||||||||| ||||    
T  55559116 ctaccttcatttcac 55559102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 1860518 - 1860803
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1860518 gtaccattacacaatccattggcatgatcgatgtttcttatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccatagctct 1860617  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||    
T  1860618 taataccattaaggaattccgttgtgaaccactcgctttggacatcagaattttcacccgatcaacaaacagaatcagagcttaaatactctttctcttc 1860717  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1860718 acccagaatcagtgacatcatatattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 1860803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 29 - 315
Target Start/End: Original strand, 49710013 - 49710299
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  49710013 agtaccattacacagtccaatggcctgatctatgtttctcatcagcataactggacatcccacctttagtttcaacctgtgatttggaattccagagctc 49710112  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    |||||||||||||| ||||||  |||||||||||| |||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||    
T  49710113 ttaataccattaagaaattccggtgtgaaccactcgctttggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctctt 49710212  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  49710213 cacctggaatcagcgacatcataaattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 49710299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 29 - 315
Target Start/End: Original strand, 35855747 - 35856033
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35855747 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaacctgtgatttggaattccagagctc 35855846  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    |||||||||||||| |||||   |||||||||||| |||||||||||||||||||||||||| | | ||| |||||||||| ||||||||||||||||||    
T  35855847 ttaataccattaagaaattctggtgtgaaccactcgctttggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctctt 35855946  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35855947 cacctggaatcagcgacatcataaattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 35856033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 29 - 315
Target Start/End: Original strand, 38517936 - 38518222
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38517936 agtaccattacacagtccattgacctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaacctgtgatttggaattccagagctc 38518035  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    |||||||||||||| ||||    |||||||||||| |||||||||||||||||||||||||| | | ||| |||||||||| ||||||||||||||||||    
T  38518036 ttaataccattaagaaattttggtgtgaaccactcgctttggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctctt 38518135  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||| ||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  38518136 cacctggaatcagcgacatcataaattcgttaacatgctcaattgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 38518222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 29 - 315
Target Start/End: Complemental strand, 49787207 - 49786921
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  49787207 agtaccattacacaatccattggcctgatcgatgtttctcaacagcataactggacatcccacctttagtttcaatctgtgatttggaattccagagctc 49787108  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    |||||||||||||| |||||   ||| |||||||| ||||||||||||||||||||||| || | | ||| |||||||||| ||||||||||||||||||    
T  49787107 ttaataccattaagaaattctggtgttaaccactcgctttggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctctt 49787008  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||| ||||||||| ||||||||| ||| |||| |||||||||||| |||||||||||||||||||||||||||||||    
T  49787007 cacctggaatcagcgacatcataaattcgttaatatgctcaattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaata 49786921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 787721 - 787841
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| ||||||    
T  787721 gtaccattacacgttccattggcctgatcgatgtttctcatcagcataactgaacatctcacctttagtttcaacctgtgatttggaattccatagctct 787820  T
Q  130 taataccattaaggaattcca 150  Q
    ||||||||||||| |||||||    
T  787821 taataccattaagaaattcca 787841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 31921314 - 31921425
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||    
T  31921314 gtaccattacacagtccattagcatgatcgatgtttctcatcagcataactggacatctcacccttagtttcaaccggtgatttggaattctagagctct 31921413  T
Q  130 taataccattaa 141  Q
    ||||||||||||    
T  31921414 taataccattaa 31921425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 13337320 - 13337361
Alignment:
Q  274 aatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  13337320 aatcaagcgttgatgcgagtattcccctttcttggaaaaata 13337361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 141
Target Start/End: Original strand, 787932 - 787960
Alignment:
Q  113 tggaattccagagctcttaataccattaa 141  Q
    |||||||||||||||||||||||||||||    
T  787932 tggaattccagagctcttaataccattaa 787960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 290; Significance: 1e-162; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 30 - 339
Target Start/End: Original strand, 52500510 - 52500819
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  52500510 gtaccattacacagtccattggcctgatcgatgtttctcatcagcacaactggacatcccacctttagtttcaaccggtgatttggaattccaaagctct 52500609  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52500610 taataccattaaggaattccgttgtgaaccgctcattttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 52500709  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaataatcttcaggaattt 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52500710 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaataatcttcaggaattt 52500809  T
Q  330 ctaccttcat 339  Q
    ||||||||||    
T  52500810 ctaccttcat 52500819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 2329010 - 2329295
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||    
T  2329010 gtaccattactcagtccattggtctgatcgatgtttctcatcagcataactggacatcccgcccttagtttcaaccggtgatttggaattccatagctct 2329109  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    |||||||||| || |||||| ||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  2329110 taataccatttagaaattccgttgtgaaccactctctttggacatcagaattttcacccgatcgacaaagagaatcagagcttaaatactctttctcttc 2329209  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||    
T  2329210 acctggaatcagtgacatcatatattcgttaacatgctcgactgaatcaagcgttggtgcgagtattcccctttcttgaaaaaata 2329295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 29 - 315
Target Start/End: Original strand, 16041865 - 16042151
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    ||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16041865 agtaccattacacagtttattggcctaatcgatgtttctcatcagcataactggacatcccacctttagtttcaacctgtgatttggaattccagagctc 16041964  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    |||||||||||||| ||||||  |||||||||||| |||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||    
T  16041965 ttaataccattaagaaattccgatgtgaaccactcgctttggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctctt 16042064  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||| ||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16042065 cacttggaatcagcgacatcataaattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcccctttcttggcaaaata 16042151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 18148529 - 18148814
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||    
T  18148529 gtaccattacacactccattggccttatcgatgtttctaatcagcataactggacatctcatctttagtttcaaccggtgatttagaattccagagctct 18148628  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    |||||||||||||||||||| ||||||||||||  |||||||||| |||||||||| |||| ||||||||||||| |||| |||||||||||||||||||    
T  18148629 taataccattaaggaattccgttgtgaaccacttgctttggacataagaattttcatccgatcgacaaacagaataagagcttaaatactctttctcttc 18148728  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18148729 acctggaatcagtgacatcatatattcgttaacatgctcaaatgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 18148814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 29 - 315
Target Start/End: Complemental strand, 6311374 - 6311087
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  6311374 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaacctatgatttggaattccagagctc 6311275  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagc-gacaaacagaatcagagtttaaatactctttctct 227  Q
    |||||||||||||| |||||   |||||||||||| |||||||||||||||||||||||||| |  | ||| |||||||||| |||||||||||||||||    
T  6311274 ttaataccattaagaaattctggtgtgaaccactcgctttggacatcagaattttcacccgatctcaaaaatagaatcagaggttaaatactctttctct 6311175  T
Q  228 tcacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6311174 tcacctggaatcagcgacatcataaattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 6311087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 30 - 315
Target Start/End: Complemental strand, 2453493 - 2453210
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  2453493 gtaccattacacaatccatttgcatgatcgatgtttctcatcagcataactggacatcccaccgttagtttcaatcggtgatttggaattccagagctct 2453394  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| |||||||||||||| |  ||  ||||||||||||||||||||||||| ||||||| ||||||||||  ||||||||||||||||||    
T  2453393 taataccattaagaaattccattgtgaatc--tcgttttggacatcagaattttcacccgatcgacaaatagaatcagagcctaaatactctttctcttc 2453296  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||| |||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  2453295 acctggaattagtgacatcatatattcgttaacatgctcaactcaataaagcgttggtgcgagtattcccctttcttggaaaaata 2453210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 29 - 315
Target Start/End: Complemental strand, 37390524 - 37390245
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37390524 agtaccattacacagtccattggcctgatcgatatttctcatcagcataactggacatcccacctttagtttcaacctgtgatttggaattccagagctc 37390425  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    |||||||||||||| |||||   ||||||||||||||       |||||||||||||||||| | | ||| |||||||||| ||||||||||||||||||    
T  37390424 ttaataccattaagaaattctggtgtgaaccactcac-------atcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctctt 37390332  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37390331 cacctggaatcagcgacatcataaattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 37390245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 36207056 - 36207341
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||| ||||||||||| |||| |||||||||||||| |||||||||||||| || | ||||||||||||||||||||||| || |||||||||    
T  36207056 gtaccattacatagtccattggcttgattgatgtttctcatcaacataactggacatctcatccttagtttcaaccggtgatttggagtttcagagctct 36207155  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||||| ||||| || |||||||||||||||||||    
T  36207156 taataccattaagaaattccgttgtgaacaactcactttggacatcataattttcacccgatcgacaaacataatcaaagcttaaatactctttctcttc 36207255  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||  ||||| |||||||||||||||||||| |||||||    
T  36207256 acctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaattgttggggcgagtattcccctttcttgaaaaaata 36207341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 30 - 315
Target Start/End: Complemental strand, 48238855 - 48238570
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||||||||||||||||||||||||||||||| || |||||| | | |||||||||| || |||||||||||||| |||||||| |||||||||    
T  48238855 gtaccattacacagtccattggcctgatcgatgtttcttatgagcatagccgcacatcccacccttggtttcaaccggtgaattggaatttcagagctct 48238756  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| ||||| ||||||||  |||| |||||||||||| | ||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  48238755 taataccattaagaaattctattgtgaaatactcgctttggacatcaaagttttcacccgatcgacaaacagaatcagagcttaaatactctttctcttc 48238656  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
     ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  48238655 gcctggaatcagcgacatcatatattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcctctttcttggaaaaata 48238570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 30 - 313
Target Start/End: Complemental strand, 48775713 - 48775430
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||| | ||||||||| ||||||||||||||||| ||||||    
T  48775713 gtaccattacacagtccaatgacctgatcgatgtttctcatcagcataattggacatcccaccctcagtttcaactggtgatttggaattccatagctct 48775614  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| |||||| ||||||||||||| || ||||||||||| ||||  ||||| |||||||| ||||||||| |||||||||||||||||||    
T  48775613 taataccattaagaaattccgttgtgaaccactcgctctggacatcagactttttgcccgatcgacaaactgaatcagagcttaaatactctttctcttc 48775514  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaa 313  Q
    ||||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  48775513 acctggaatcatttacatcatatattcgttaacatgctcaaccgaatcaagcgttggtgcgagtattcccttttcttggaaaaa 48775430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 25074234 - 25074113
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    ||||| ||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25074234 agtactattacacagtccatttgtctgatcgatgtttctcatcagcataattggacatcccacccttagtttcaaccggtgatttggaattccagagctc 25074135  T
Q  129 ttaataccattaaggaattcca 150  Q
    |||||||||||||| |||||||    
T  25074134 ttaataccattaagaaattcca 25074113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 12451185 - 12451222
Alignment:
Q  54 tgatcgatgtttctcatcagcataactggacatcccac 91  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12451185 tgatcgatgtttctcatcagcataactggacatcccac 12451222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 30 - 344
Target Start/End: Complemental strand, 29012 - 28698
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29012 gtaccattacacaatccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 28913  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  28912 taataccattaagaaattccgttgtgaaccactcactttggacatcaaaattttcacccaagcgacaaacagaatcagagtttaaatactttttctcttc 28813  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaataatcttcaggaattt 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28812 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaataatcttcaggaattt 28713  T
Q  330 ctaccttcatctcac 344  Q
    |||||||||| ||||    
T  28712 ctaccttcatttcac 28698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 282; Significance: 1e-158; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 30 - 315
Target Start/End: Complemental strand, 24269448 - 24269163
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24269448 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 24269349  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24269348 taataccattaaggaattccgttgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 24269249  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24269248 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 24269163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 30 - 315
Target Start/End: Complemental strand, 17684207 - 17683922
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17684207 gtaccattacacagtccattgacctgatcgatgtttctcatcagcataactggacatcccacccttagtttcaaccggtgatttggaattccagagctct 17684108  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||| || |||||||||||||||||||    
T  17684107 taataccattaagaaattccgttgtgaaccactcactttggacatcaaaattttcacccgatcgacaaacaaaatcatagcttaaatactctttctcttc 17684008  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  17684007 acctggaatcagtgacatcatatattcgttaacatgctcaattgaatcaagcgttggagcgagtattcccctttcttggaaaaata 17683922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 27509215 - 27509500
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||    
T  27509215 gtaccattacacagtccattggcctgatcgatgtttctcatcaacataactggacatcccacccttattttcaaccggtgatttgaaattccagagctct 27509314  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| |||||| ||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  27509315 taataccattaagaaattccgttgtgaaccactcgctttggacattagaattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttc 27509414  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27509415 acctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaagcgttgatgcgagtattcccctttcttggaaaaata 27509500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 29 - 315
Target Start/End: Original strand, 21395210 - 21395496
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  21395210 agtaccattacacagtccattggcctgatctatgtttctcatcagcataactggacatcccacctttagcttcaacctgtgatttggaattccagagctc 21395309  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    |||||||||||||| ||||||   ||||||||||| |||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||    
T  21395310 ttaataccattaagaaattccggcgtgaaccactcgctttggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctctt 21395409  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21395410 cacctggaatcagcgacatcataaattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 21395496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 35609526 - 35609811
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||    
T  35609526 gtaccactacacagtccattggcctgatcaatgtttctcatcagcataactggacatccaacccttagtttcaaccagtgatttggaattccagagctct 35609625  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| |||||  ||||||||||||| |||||||||||||||||||||| ||| ||||||||| |||||||| |||||||||||||||||||    
T  35609626 taataccattaagaaattctgttgtgaaccactcgctttggacatcagaattttcactcgatcgacaaacataatcagagcttaaatactctttctcttc 35609725  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35609726 acctggaatcagtgacatcatatattcgttaacatactcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 35609811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 27192330 - 27192615
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| || ||||||||||||||||||||||| |||||||||    
T  27192330 gtaccattacacagtccattggcctgatcgatgtttctcatcagcatagccggacatcccacccttggtttcaaccggtgatttggaatttcagagctct 27192429  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| ||||| ||||||||  |||| |||||||||||| || |||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  27192430 taataccattaagaaattctattgtgaaatactcgctttggacatcaaaaatttcacccgatcgacaaatagaatcagagcttaaatactctttctcttc 27192529  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27192530 acctagaatcagcgacatcatatattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 27192615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 27842144 - 27842429
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| || ||||||||||||||||||||||| |||||||||    
T  27842144 gtaccattacacagtccattggcctgatcgatgtttctcatcagcatagccggacatcccacccttggtttcaaccggtgatttggaatttcagagctct 27842243  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| ||||| ||||||||  |||| |||||||||||| || |||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  27842244 taataccattaagaaattctattgtgaaatactcgctttggacatcaaaaatttcacccgatcgacaaatagaatcagagcttaaatactctttctcttc 27842343  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27842344 acctagaatcagcgacatcatatattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 27842429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 29 - 315
Target Start/End: Complemental strand, 41920552 - 41920266
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41920552 agtaccattacacagtccattggcctgatcgatgtttctcaacagcataactggacatcccacctttagtttcaacctgtgatttggaattccagagctc 41920453  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    |||||||||||||| |||||   |||||||||||| |||||||||||||||||||||||||| | | ||| |||||||||| ||||||||||||| ||||    
T  41920452 ttaataccattaagaaattctggtgtgaaccactcgctttggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttatctt 41920353  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||  ||||||||| ||||||||||||| | || |||||||||||| |||||||||||||||||||||||||||||||    
T  41920352 cacctggaatcaacgacatcataaattcgttaacatgcttaattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaata 41920266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 29 - 315
Target Start/End: Complemental strand, 28666552 - 28666265
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccaccttt-agtttcaaccggtgatttggaattccagagct 127  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  28666552 agtaccattacacagtccattggcctgatcgatgtttctcaacagcataactggacatcccaccttttagtttcaacctgtgatttggaattccagagct 28666453  T
Q  128 cttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctct 227  Q
    ||||||||||||||| |||||   |||||||||||| ||||||||||||||||||||||| || | | ||| |||||||||| |||||||||||||||||    
T  28666452 cttaataccattaagaaattctggtgtgaaccactcgctttggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctct 28666353  T
Q  228 tcacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||| ||||||| ||||||||| ||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||    
T  28666352 tcacctagaatcagcgacatcataaattcgttaacatgctcaattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaata 28666265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 29 - 315
Target Start/End: Complemental strand, 37825386 - 37825099
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccaccttt-agtttcaaccggtgatttggaattccagagct 127  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  37825386 agtaccattacacagtccattggcctgatcgatgtttctcaacagcataactggacatcccaccttttagtttcaacctgtgatttggaattccagagct 37825287  T
Q  128 cttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctct 227  Q
    ||||||||||||||| |||||   |||||||||||| ||||||||||||||||||||||| || | | ||| |||||||||| |||||||||||||||||    
T  37825286 cttaataccattaagaaattctggtgtgaaccactcgctttggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctct 37825187  T
Q  228 tcacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||| ||||||| ||||||||| ||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||    
T  37825186 tcacctagaatcagcgacatcataaattcgttaacatgctcaattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaata 37825099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 176 - 315
Target Start/End: Original strand, 24245812 - 24245951
Alignment:
Q  176 agaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttcaactgaa 275  Q
    ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24245812 agaattttcacccgatcgacaaacagaatcagatcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaa 24245911  T
Q  276 tcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  24245912 tcaagcgttggtgcgagtattcccctttcttgaaaaaata 24245951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 24245693 - 24245784
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattcc 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24245693 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacccttagtttcaaccggtgatttggaattcc 24245784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 266; Significance: 1e-148; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 30 - 315
Target Start/End: Complemental strand, 21114122 - 21113837
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21114122 gtaccattacacagtccattggcttgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 21114023  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21114022 taataccattaaggaatttcgttgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 21113923  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  21113922 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcaagtattccccttttttggaaaaata 21113837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 29 - 315
Target Start/End: Complemental strand, 25218944 - 25218658
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25218944 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaacctgtgatttggaattccagagctc 25218845  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    |||||||||||||| ||||||  |||||||||||| |||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||    
T  25218844 ttaataccattaagaaattccggtgtgaaccactcgctttggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctctt 25218745  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25218744 cacctggaatcagcgacatcataaattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 25218658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 29 - 315
Target Start/End: Complemental strand, 25209411 - 25209125
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  25209411 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaacctgtgatttggaataccagagctc 25209312  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    |||||||||||||| |||||   |||||||||||  |||||||||||||||||||| ||||| | | ||| |||||||||| ||||||||||||||||||    
T  25209311 ttaataccattaagaaattctggtgtgaaccactagctttggacatcagaattttcgcccgatctaaaaatagaatcagagcttaaatactctttctctt 25209212  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25209211 cacctggaatcagcgacatcataaattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 25209125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 29 - 315
Target Start/End: Original strand, 30307017 - 30307303
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||    
T  30307017 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaacttgtgatttggaattgcagagctc 30307116  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    |||||||||||||| |||||   |||||||||||| |||||||||||||||||||||||||| | | ||| |||||| ||| ||||||||||||||||||    
T  30307117 ttaataccattaagaaattctggtgtgaaccactcgctttggacatcagaattttcacccgatctaaaaatagaatcggagcttaaatactctttctctt 30307216  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30307217 cacctggaatcagcgacatcataaattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 30307303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 29 - 315
Target Start/End: Complemental strand, 31978906 - 31978620
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31978906 agtaccattacacagtccattggcttgatcgatgtttctcatcagcataactggacatcccacctttagtttcaacctgtgatttggaattccagagctc 31978807  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    |||||||||||||| ||||||  |||||||||||| ||||||||||| |||||||| ||||| | |||||||||||||||| ||||||||||||||||||    
T  31978806 ttaataccattaagaaattccgatgtgaaccactcgctttggacatctgaattttcccccgatctacaaacagaatcagagcttaaatactctttctctt 31978707  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||| ||||||||| ||| ||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31978706 cacctggaatcagcgacatcataaatttgttgacatgctcaactgaatcaagcgttgatgcgagtattcccctttcttggaaaaata 31978620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 29 - 315
Target Start/End: Original strand, 7821678 - 7821964
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||  ||||||||||||||||||||||    
T  7821678 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggaaattccacctttagtttcaacatgtgatttggaattccagagctc 7821777  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    ||||||| |||||| |||||   |||||||||||| |||||||||||||||||||||||||| | | ||| |||||||||| ||||||||||||||||||    
T  7821778 ttaatacaattaagaaattctggtgtgaaccactcgctttggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctctt 7821877  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||| |||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7821878 cacctgaaatcagcgacatcataaattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 7821964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 33861758 - 33861647
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||    
T  33861758 gtaccattacacagtccattagcatgatcgatgtttctcatcagcataactggacatctcacccttagtttcaaccggtgatttggaattctagagctct 33861659  T
Q  130 taataccattaa 141  Q
    ||||||||||||    
T  33861658 taataccattaa 33861647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 14714106 - 14714225
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||||||| |||||| ||| ||| ||||||||||||||| ||||| ||||||||||| |||||||||||| |||||||||||| ||||||||||    
T  14714106 gtaccattacacagaccattgacctcatcaatgtttctcatcagcctaactagacatcccacccttagtttcaacctgtgatttggaatgccagagctct 14714205  T
Q  130 taataccattaaggaattcc 149  Q
    ||||||||||||| ||||||    
T  14714206 taataccattaagaaattcc 14714225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 14767406 - 14767466
Alignment:
Q  32 accattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacc 92  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  14767406 accattacacagtccattggcatgatcgatgtttctcatcagcataactggacatcccacc 14767466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 18847 - 19132
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18847 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 18946  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    |||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||    
T  18947 taataccattaaggaattccgttgtgaaccactcgctttgcacatcagaattttcactcgatcgacaaacagaatcagagcttaaatactctttctcttc 19046  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19047 acctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaagcgttggtgcgagtattccccttttttggaaaaata 19132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 30 - 312
Target Start/End: Complemental strand, 5637 - 5355
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5637 gtaccattacacagtccattggtctgatcgatgtttctcatcagcataactggacatcccacctttagtatcaaccggtgatttggaattccagagctct 5538  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    |||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  5537 taataccattaaggaattctgttgtgaaccactcgctttggacatcagaattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttc 5438  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaa 312  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5437 acctgaaatcagtgacatcatatattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaa 5355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 238; Significance: 1e-131; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 30 - 315
Target Start/End: Complemental strand, 2202557 - 2202272
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  2202557 gtaccattacacagtccatttgcctgatcgatgtttctcatcggcataactggacatcccacccttagtttcaaccagtgatttggaattccagagctct 2202458  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
     ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  2202457 aaataccattaaggaattcagttgtgaaccactcactttggacatcagaattttcacccgatcgacaaatagaatcagagcttaaatactctttctcttc 2202358  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  2202357 acctggaatcagtgacatcatatattcgttaacatgttctactgaattaagcgttggtgcgagtattcccctttcttggaaaaata 2202272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 10187385 - 10187670
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  10187385 gtaccattacacagtccattgacctgatcgatgtttctcatcagcataactggacatcccacccttagtttcaaccggtgatttggaattcaagagctct 10187484  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  10187485 taataccattaagaaattccgttgtgaaccactcactttggacatcaaaattttcacccgatcgacaaacagaatcatagcttaaatactctttctcttc 10187584  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||| |||||||||||| |||||||||||||||    
T  10187585 acctggaatcagtgacatcatatattcgttaacatgctcaattgaatcaagtgttggagcgagtattcccttttcttggaaaaata 10187670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 29 - 315
Target Start/End: Original strand, 12517228 - 12517514
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||| |||||    
T  12517228 agtaccattacacagtccattggcctgatcgatgtttctcatcaacataaccggacatcccacctttagtttcaacctgtgatttggaattccaaagctc 12517327  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    |||||||||||||| ||||||  |||||||||||| |||||||||||||||||||||||| | |  ||||||||||||||| ||||||||||||||||||    
T  12517328 ttaataccattaagaaattccgatgtgaaccactcgctttggacatcagaattttcaccccatcatcaaacagaatcagagcttaaatactctttctctt 12517427  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||    
T  12517428 cacctggaatcagcgacatcataaattcgttaacatgctcaactgaatcaagcgttggtgcaaatattcccctttcttggaaaaata 12517514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 18343966 - 18344251
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| || |||||||| ||||||||||||||  ||||||||    
T  18343966 gtaccattacacagtccattggcctgatcgatgtttctcatcagcatagccggacatcccacccttggtttcaactggtgatttggaattttagagctct 18344065  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| ||||| ||||||||  |||| |||||||||||| ||||||||||||| ||||||| ||||||| || |||||||||||||||||||    
T  18344066 taataccattaagaaattctattgtgaaatactcgctttggacatcaaaattttcacccgatcgacaaatagaatcaaagcttaaatactctttctcttc 18344165  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
     ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18344166 gcctggaatcagcgacatcatatattcgtcaacatgctcaactgaatcaagcgttggtgcaagtattcccctttcttggaaaaata 18344251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 29 - 315
Target Start/End: Original strand, 15333482 - 15333769
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctc-atcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagct 127  Q
    |||||||||||||||||||||||||||||| |||||| || |||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  15333482 agtaccattacacagtccattggcctgatcaatgtttttccatcaccataactggacatcccacctttagttttaacctgtgatttggaattccagagct 15333581  T
Q  128 cttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctct 227  Q
    ||||||||||||||| |||| |  | |||||| ||| ||||||||||||||||||||||| || | ||||||||||||||||  ||||||||||||||||    
T  15333582 cttaataccattaagaaatttcgatatgaacctctcgctttggacatcagaattttcacctgatctacaaacagaatcagagcctaaatactctttctct 15333681  T
Q  228 tcacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||| ||| |||||||||||    
T  15333682 tcacctggaatcagcgacatcataaattcgttaacatgctcaactgaatcaagtgttggtgcgagtattcccatttgttggaaaaata 15333769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 82 - 315
Target Start/End: Complemental strand, 31510525 - 31510292
Alignment:
Q  82 gacatcccacctttagtttcaaccggtgatttggaattccagagctcttaataccattaaggaattccattgtgaaccactcactttggacatcagaatt 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||   |||||||||||| |||| ||||||||||||    
T  31510525 gacatcccacctttagtttcaacctgtgatttggaattccagagctcttaataccattaagaaattctggtgtgaaccactcgctttagacatcagaatt 31510426  T
Q  182 ttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagc 281  Q
    ||||||||| | | ||| ||||| |||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||    
T  31510425 ttcacccgatctaaaaatagaattagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaactgaatcaagc 31510326  T
Q  282 gttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||||||||||||||| |||||||    
T  31510325 gttggtgcgagtattcccctttcttgaaaaaata 31510292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 82 - 315
Target Start/End: Complemental strand, 29640355 - 29640121
Alignment:
Q  82 gacatcccacctttagtttcaaccggtgatttggaattccagagctcttaataccattaaggaattccat-tgtgaaccactcactttggacatcagaat 180  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    |||||||||||| |||| |||||||||||    
T  29640355 gacatcccacctttagtttcaacctgtgatttggaattccagagctcttaataccattaagaaattcttggtgtgaaccactcgctttagacatcagaat 29640256  T
Q  181 tttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaag 280  Q
    |||||||||| | | ||| ||||| |||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  29640255 tttcacccgatctaaaaatagaattagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaactgaatcaag 29640156  T
Q  281 cgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||||||||||||||||||||||||    
T  29640155 cgttggtgcgagtattcccctttcttggaaaaata 29640121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 177 - 315
Target Start/End: Original strand, 30881315 - 30881453
Alignment:
Q  177 gaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttcaactgaat 276  Q
    |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  30881315 gaattttcacccgatcgacaaacagaaccagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaacagaat 30881414  T
Q  277 caagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  30881415 caagcgttggtgcgagtatttccctttcttggaaaaata 30881453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 12519448 - 12519568
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12519448 gtaccattacacggtccattggcctgatcgatgcttctcatcagcataattggacatcccacccttagtttcaaccggtgatttggaattccagagctct 12519547  T
Q  130 taataccattaaggaattcca 150  Q
    ||||||||||||| |||||||    
T  12519548 taataccattaagaaattcca 12519568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 29641726 - 29641668
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatc 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29641726 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatc 29641668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 31511890 - 31511832
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatc 87  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31511890 agtaccattacatagtccattggcctgatcgatgtttctcatcagcataactggacatc 31511832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 237; Significance: 1e-131; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 31 - 315
Target Start/End: Original strand, 10110442 - 10110726
Alignment:
Q  31 taccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctctt 130  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10110442 taccattacacagtccattggcccgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctctt 10110541  T
Q  131 aataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttca 230  Q
    |||| |||||||||||||| ||||||||||||   ||||||||||||||||||||||||| | ||||||| ||||| || ||||||||||||||||||||    
T  10110542 aatatcattaaggaattccgttgtgaaccacttgatttggacatcagaattttcacccgatcaacaaacataatcaaagcttaaatactctttctcttca 10110641  T
Q  231 cctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10110642 cctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 10110726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 10000248 - 10000533
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10000248 gtaccattacacagtccattggcccgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 10000347  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||| ||||| |||||||| ||||||||||||   ||||||||||||||||||||||||| | ||||||| ||||| || |||||||||||||||||||    
T  10000348 taatatcattagggaattccgttgtgaaccacttgatttggacatcagaattttcacccgatcaacaaacataatcaaagcttaaatactctttctcttc 10000447  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10000448 acctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcctctttcttggaaaaata 10000533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 10237398 - 10237681
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10237398 gtaccattacacagtccattggcccgatcgatgtttctcatcagcataac-ggacatcccacctttagtttcaaccggtgatttggaattccagagctct 10237496  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||| |||||||||||||| ||||||||||||   ||||||||||||||||||||||||| | ||||||| ||||| || || ||||||||||||||||    
T  10237497 taatatcattaaggaattccgttgtgaaccacttgatttggacatcagaattttcacccgatcaacaaacataatcaaagctt-aatactctttctcttc 10237595  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10237596 acctggaatcagtaacatcatatattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcccctttcttgaaaaaata 10237681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 30 - 315
Target Start/End: Complemental strand, 10969159 - 10968874
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||| |||  |||||| ||||||||||||||||||||| ||||| ||||||||    
T  10969159 gtaccattatacagtccattggcctgattgatgtttctcatcagcataactcgactccccaccattagtttcaaccggtgatttgaaattctagagctct 10969060  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| ||| |||| |||||||||||||||||||    
T  10969059 taataccattaagaaattccgttgtgaaccactcgctttggacatcagaattttcacccgatcgacaaacaaaataagagcttaaatactctttctcttc 10968960  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||| ||||||||    
T  10968959 acctggaatcagtgacatcatatattcgttaacatgctaaactgaatcaagcgttggtgcgagtattccccttgcttagaaaaata 10968874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 50410013 - 50410298
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||| | |||||||||||||||||||||    
T  50410013 gtaccattactcagtccattggtctgatcgatgtttctcatcagcataactggacatctcacccttagtttcaaccagcgatttggaattccagagctct 50410112  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    |||||||||| || ||||||  |||||||||||| | |||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  50410113 taataccatttagaaattccgctgtgaaccactctcattggacatcagaattttcacccgatcgacaaagagaatcagagcttaaatactctttctcttc 50410212  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||    
T  50410213 acctggaatcagtgacatcatatatttgttaacatgctcgactgaatcaagcgttggtgcgagtattcccctttcttgaaaaaata 50410298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 10038481 - 10038766
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  10038481 gtaccactacacagtccattggcctgatcaatgtttctcatcagcataactggacatcccaaccttagtttcaaccggtgatttggaattccagagctct 10038580  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| |||||| |||||||||| || |||||| ||||||||||||||||||| ||||||||||||| |||| ||||||| | |||||||||    
T  10038581 taataccattaagaaattcctttgtgaaccattcgctttgggcatcagaattttcacccgatcgacaaacagaatgagagcttaaataatatttctcttc 10038680  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||||||||||||||||| |||| ||| |||| ||||||||| ||||| ||||||||||||||||||||||||||||    
T  10038681 acctggaatcagtgacatcatatattcattaatatgctcaattgaatcaagtgttggcgcgagtattcccctttcttggaaaaata 10038766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 46912912 - 46913197
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||    
T  46912912 gtaccattacacaatccattggcctgatcgatatttctcatcagcataactggacatcccacccttagtttcaaccggtgattttgaattccatagctct 46913011  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| |||||| ||||||||||||| |||||||||||||||||| | ||||| ||||||||| ||||| || ||||||||| ||| |||||    
T  46913012 taataccattaagaaattccgttgtgaaccactcgctttggacatcagaatttccccccgatcgacaaacataatcaaagcttaaatactatttttcttc 46913111  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  46913112 acctggaattggtgacatcatatattcgttaacatgctcaactgaatcaagcgttggtgcgagtattctcctttcttggaaaaata 46913197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 30 - 313
Target Start/End: Original strand, 11368487 - 11368771
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  11368487 gtaccattacacagtccattgacctgatcgatgtttctcatcaacataactggacatcccacccttagtttcaaccggtgatttggaattctagagctct 11368586  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcaga-attttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||||  ||||||||| | |||||||  ||||||||| ||||||||||||||||||    
T  11368587 taataccattaagaaattccgttgtgaaccactcgctctggacatcagactttttcacccaatcgacaaattgaatcagagcttaaatactctttctctt 11368686  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaa 313  Q
    |||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  11368687 cacctggaatcactgacatcatatattcgttaacatgctcaaccgaatcaagcgttggtgcgagtattcccttttcttggaaaaa 11368771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 31 - 314
Target Start/End: Original strand, 47692811 - 47693094
Alignment:
Q  31 taccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctctt 130  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||| | || |||  ||||||||||||||||||||||||||||||||||||    
T  47692811 taccattacacagtccattgacctgatcgatgcttctcatcagcataactggaaaacctacccctagtttcaaccggtgatttggaattccagagctctt 47692910  T
Q  131 aataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttca 230  Q
    |||||||||||| |||| | ||||||||||||| || |||||||||||||||||  |||| |||||||||||||||||| ||||||||||||||||||||    
T  47692911 aataccattaagaaatttcgttgtgaaccactcgctctggacatcagaattttcgtccgatcgacaaacagaatcagaggttaaatactctttctcttca 47693010  T
Q  231 cctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaat 314  Q
    |||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  47693011 cctggaattagtgacatcatgtattcgttaacatgctcaactgaatcaagcgttggtgcgaggattcccctttcttgggaaaat 47693094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 11362099 - 11362385
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11362099 gtaccattacacaatccattgacctgatcgatgtttctcatcagcatgactggacatcccaccattagtttcaaccggtgatttggaattccagagctct 11362198  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagag-tttaaatactctttctctt 228  Q
    ||||||||||||| |||||| ||||||||||||| || | ||||||||| ||||| ||||| |||||||| ||||||||| || ||| | ||||||||||    
T  11362199 taataccattaagaaattccgttgtgaaccactcgctctagacatcagacttttcgcccgatcgacaaactgaatcagagcttaaaaaaatctttctctt 11362298  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  11362299 cacctggaatcactgacatcatatattcgttaacatgctcaaccgaatcaagcgttggtgcgagtattcccttttcttggaaaaata 11362385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 31 - 315
Target Start/End: Original strand, 13529882 - 13530165
Alignment:
Q  31 taccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctctt 130  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13529882 taccattacacaatccattggcctgatcgatgtttctcatgagcata-ctagacatcccacccttagtttcaaccggtgatttggaattccagagctctt 13529980  T
Q  131 aataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttca 230  Q
    ||||||| |||| |||||| ||||||||||||| ||||||||| || |||||||||| || |||||| ||||| ||||| ||||||||||||||||||||    
T  13529981 aataccactaagaaattccgttgtgaaccactcgctttggacaccaaaattttcacctgatcgacaagcagaaccagagcttaaatactctttctcttca 13530080  T
Q  231 cctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||| |||||||||||||||||||||||| ||| |||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  13530081 cctggactcagtgacatcatatattcgttaaaatgctcaactgaatgaagtgttggtgcgagtattcccctttcttggaaaaata 13530165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 76 - 315
Target Start/End: Original strand, 32658 - 32897
Alignment:
Q  76 taactggacatcccacctttagtttcaaccggtgatttggaattccagagctcttaataccattaaggaattccattgtgaaccactcactttggacatc 175  Q
    |||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||    |||||||||||| |||||||||||    
T  32658 taactggacatctcacctttagtttcaacctgtgatttggatttccagagctcttaataccattaagaaattatggtgtgaaccactcgctttggacatc 32757  T
Q  176 agaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttcaactgaa 275  Q
    ||||||||||||||| | | ||| |||||||||| ||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||| |||||||||    
T  32758 agaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacttggaatcagcgacatcataaattcgttaacatgctcaactgaa 32857  T
Q  276 tcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32858 tcaagcgttggtgcgagtattcccctttcttggaaaaata 32897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 117 - 315
Target Start/End: Original strand, 52917994 - 52918192
Alignment:
Q  117 attccagagctcttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaat 216  Q
    ||||||||||||||| |||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||| ||||||    
T  52917994 attccagagctcttagtaccattaagaaattccgttgtgaaccactcgctttggacatcagaattttcacccgatcgacaaacaaaatcagagcttaaat 52918093  T
Q  217 actctttctcttcacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52918094 actctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaagcgttggtgcgggtattcccctttcttggaaaaata 52918192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 41763740 - 41763629
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||    
T  41763740 gtaccattacacagtccattagcatgatcgatgtttctcatcagcataactggacatctcacccttagtttcaaccggtgatttggaattctagagctct 41763641  T
Q  130 taataccattaa 141  Q
    ||||||||||||    
T  41763640 taataccattaa 41763629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 15328939 - 15328879
Alignment:
Q  32 accattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacc 92  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15328939 accattacacagtccattggcatgatcgatgtttctcatcagcataactggacatcccacc 15328879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 186398 - 186680
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  186398 gtaccattacacagtccactggcctgatcgatgtttctcatcagcataactagacatcccacctttagtttcaaccggtgatttggaa--ccagagctct 186495  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    |||||||||||||||||||| ||| ||||||||| |||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  186496 taataccattaaggaattccgttgagaaccactcgctttggacatcagaattt-cacccgatcgacaaacagaatcagagcttaaatactctttctcttc 186594  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  186595 acctggaatcagtgacatcatatattcgttaacatgctcagctgaatcaagcgttggtgcgagtattcccctttattggaaaaata 186680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0356 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 30 - 307
Target Start/End: Complemental strand, 18247 - 17970
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  18247 gtaccattacacagtccattagcctgatcgatgtttctcatcagcataactggacatcccacccttagtttcaaccggtgatttggaattctagagctct 18148  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| |||||  ||||||||||||| |||||||||||| ||||||||||||| || |||||||||||| || |||||||||||||||||||    
T  18147 taataccattaagaaattctgttgtgaaccactcgctttggacatcataattttcacccgatcggcaaacagaatcaaagcttaaatactctttctcttc 18048  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttg 307  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  18047 acctggaatcagtgacatcatatattcgttaacatgctcaactaaatcaagcgttggtgcgagtattcccctttcttg 17970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 219; Significance: 1e-120; HSPs: 2)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 29 - 315
Target Start/End: Original strand, 19297 - 19583
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19297 agtaccattacacagtccattagcaagatcgatgtttctcatcagcataactggacatcccacctttagtttcaacctgtgatttggaattccagagctc 19396  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    |||||||||||||| ||||||  |||||||||||| |||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||    
T  19397 ttaataccattaagaaattccgatgtgaaccactcgctttggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctctt 19496  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||| ||||||||| ||| ||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19497 cacctggaatcagcgacatcataaatttgttgacatgctcaactgaatcaagcgttgatgcgagtattcccctttcttggaaaaata 19583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 29 - 315
Target Start/End: Original strand, 31773 - 32058
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| || ||    
T  31773 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaacctgtgatttgggattccaaagatc 31872  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    |||||||||||||| ||||||  |||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  31873 ttaataccattaagaaattccgatgtgaaccactcgctttggacatcagaattttcacccgatctacaaacagaatcagagtttaaatactctttctctt 31972  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||||  |||||||| ||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  31973 cacctggaatcagcaacatcataaattcgttaacatgctcaactgaatcaagcgttggtgcaagta-tcccctttcttggaaaaata 32058  T

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Target: scaffold0002 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 29 - 315
Target Start/End: Complemental strand, 321715 - 321429
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  321715 agtaccattacacagtccattggcctgatcgaggtttcttatcagcataactggacatcccacctttagtttcaacctgtgatttggaattccagagctc 321616  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    | |||||||||||| |||||   |||||||||||| |||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||    
T  321615 tgaataccattaagaaattctgatgtgaaccactcgctttggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctctt 321516  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||| |||||| || |||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  321515 cacctgaaatcagcgatatcataaattcgttaacatgctcaactgaatcaagcattggtgcgagtattcccctttcttggaaaaata 321429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 29 - 315
Target Start/End: Complemental strand, 951 - 665
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctc 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||| |||||||||||||||| |||||    
T  951 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataattggacatcccacttttagcttcaacctgtgatttggaattccatagctc 852  T
Q  129 ttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctctt 228  Q
    |||||||||||||| ||||||  |||||||||||| |||||||||||||||||||||||| | | |||||||||||||||| ||||||||||||||| ||    
T  851 ttaataccattaagaaattccgatgtgaaccactcgctttggacatcagaattttcacccaatctacaaacagaatcagaggttaaatactctttctttt 752  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    ||||||||||||| ||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  751 cacctggaatcagcgacatcataaattcattaacatgctcaactgaatcaagcgttggtgcgagtattcccctttattggaaaaata 665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 208; Significance: 1e-114; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 30 - 313
Target Start/End: Original strand, 182652 - 182935
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  182652 gtaccattacacagtccattgacctgattgatgtttctcatcagcataactggacatcccaccattagtttcaaccggtgatttgaaattccagagctct 182751  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| |||||| |||||||||||||||| | | ||||||| ||||| ||||| |||||||| ||||||||| |||||||||||||||||||    
T  182752 taataccattaagaaattccgttgtgaaccactcactctagccatcagatttttcgcccgatcgacaaactgaatcagagcttaaatactctttctcttc 182851  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaa 313  Q
    || |||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  182852 acttggaatcactgacatcatatattcgttaacatgctcaaccgaatcaagcgttggtgcgagtattcccttttcttggaaaaa 182935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 165371 - 165657
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  165371 gtaccattacacaatccattgacctgatcgatgtttctcatcagcatgactggacatcccaccattagtttcaaccggtgatttggaattccagagctct 165470  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagag-tttaaatactctttctctt 228  Q
    ||||||||||||| |||||| ||||||||||||| || | ||||||||| ||||| ||||| |||||||| ||||||||| || ||| | ||||||||||    
T  165471 taataccattaagaaattccgttgtgaaccactcgctctagacatcagacttttcgcccgatcgacaaactgaatcagagcttaaaaaaatctttctctt 165570  T
Q  229 cacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  165571 cacctggaatcactgacatcatatattcgttaacatgctcaaccgaatcaagcgttggtgcgagtattcccttttcttggaaaaata 165657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 29 - 315
Target Start/End: Complemental strand, 49316 - 49029
Alignment:
Q  29 agtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccaccttt-agtttcaaccggtgatttggaattccagagct 127  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  49316 agtaccattacacagtccattggcctgatcgatgtttctcaacagcataactggacatcccaccttttagtttcaacctgtgatttggaattccagagct 49217  T
Q  128 cttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctct 227  Q
    ||||||||||||||| |||||   |||||||||||| ||||||||||||||||||||||| || | | ||| |||||||||| |||||||||||||||||    
T  49216 cttaataccattaagaaattctggtgtgaaccactcgctttggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctct 49117  T
Q  228 tcacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||||| ||||||| ||||||||| ||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||    
T  49116 tcacctagaatcagcgacatcataaattcgttaacatgctcaattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaata 49029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1139 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: scaffold1139
Description:

Target: scaffold1139; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 841 - 1126
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||| ||||||||||||||| |  |||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||    
T  841 gtaccattacacaatccattggcctgatcaacatttctcatcagcataactggacatcctacccttagcttcaaccggtgatttggaattccagagctct 940  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| |||||| ||||||||||||| || ||| ||||||||||||| |||||  |||||||| |||||||| |||||||||||||||||||    
T  941 taataccattaagaaattccgttgtgaaccactcgctctggtcatcagaattttcgcccgattgacaaacaaaatcagagcttaaatactctttctcttc 1040  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    || ||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||    
T  1041 acttggaatcagtgacatcatatattcgttaacatgctcgactgaattaagcgttggtgcgagtattcccctttcttggaaaaata 1126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 30 - 286
Target Start/End: Complemental strand, 280 - 24
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  280 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataaccggacatcccacccttagtttcaactggtgatttggaattccagagctct 181  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| ||||||||||||||||||||  |||||| |||||||||||||||||| ||||| ||| |||||||| ||||||||||||||||  |    
T  180 taataccattaagaaattccattgtgaaccactcgttttggaaatcagaattttcacccgatcgacatacaaaatcagagcttaaatactctttctcgcc 81  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttgg 286  Q
    ||||| ||||||||||||| |||||||||||||||| ||||||||||||||| ||||    
T  80 acctgaaatcagtgacatcgtatattcgttaacatgctcaactgaatcaagccttgg 24  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 166; Significance: 1e-88; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 16526 - 16810
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||| |||| | ||||||||||||||||||||||||  ||||||| ||||||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  16526 gtaccattgcacaattcattggcctgatcgatgtttctcagaagcataagtggacatcctacctt-agtttcaaccggtcatttggaattccagagctct 16624  T
Q  130 taataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttc 229  Q
    ||||||||||||| |||||  ||||||||||||| |||||||||||||||||||| | |||  || ||||||||||| || ||||| |||||||||||||    
T  16625 taataccattaagaaattctgttgtgaaccactcgctttggacatcagaattttcgctcgattgaaaaacagaatcatagcttaaaaactctttctcttc 16724  T
Q  230 acctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 315  Q
    |||| |||||||||| ||||||||| |||||||||  || ||| ||| ||||||||||||||||||||||||||||||||||||||    
T  16725 acctagaatcagtgaaatcatatatgcgttaacatactccactaaattaagcgttggtgcgagtattcccctttcttggaaaaata 16810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1424 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold1424
Description:

Target: scaffold1424; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 113 - 244
Target Start/End: Original strand, 1572 - 1703
Alignment:
Q  113 tggaattccagagctcttaataccattaaggaattccattgtgaaccactcactttggacatcagaattttcacccgagcgacaaacagaatcagagttt 212  Q
    |||||||| || |||||||||||||||||| |||||| ||||||||||||| |||||||||||| ||||||||||||| ||| ||||| |||||||||||    
T  1572 tggaattctagtgctcttaataccattaagaaattccgttgtgaaccactcgctttggacatcaaaattttcacccgatcgataaacataatcagagttt 1671  T
Q  213 aaatactctttctcttcacctggaatcagtga 244  Q
    |||||| |||||||||||||||||||||||||    
T  1672 aaatacgctttctcttcacctggaatcagtga 1703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1424; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 1522 - 1575
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactgga 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1522 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactgga 1575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 97201 - 97082
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||| |||||||||||| |  |||||||    
T  97201 gtaccattacacagtccattgacctgatcaatgtttctcatcagcctaactggacatcccacccttaatttcaacctgtgatttggaatgctggagctct 97102  T
Q  130 taataccattaaggaattcc 149  Q
    ||||||||||||| ||||||    
T  97101 taataccattaagaaattcc 97082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 126070 - 126181
Alignment:
Q  30 gtaccattacacagtccattggcctgatcgatgtttctcatcagcataactggacatcccacctttagtttcaaccggtgatttggaattccagagctct 129  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||| ||| |||||||| |||||||||||   |||||||||    
T  126070 gtaccattacacagtccattggtctgatcgatgtttctcatcaacataactggaaatcccacccttattttcaacctgtgatttggaacgtcagagctct 126169  T
Q  130 taataccattaa 141  Q
    ||||||||||||    
T  126170 taataccattaa 126181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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