View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0809_low_89 (Length: 374)
Name: NF0809_low_89
Description: NF0809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0809_low_89 |
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Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 44 - 322
Target Start/End: Complemental strand, 39040223 - 39039945
Alignment:
| Q |
44 |
gagcttatatcacttattcttaaattaagtaggacctaacaaagtatataattctttacatgaatggtgattggtgacctaacaaagtaggaccaaagtt |
143 |
Q |
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| T |
39040223 |
gagcttatatcacttattcttaaattaagtaggacctaacaaagtatataattctttacatgaatggtgattggtgacctaacaaagtaggaccaaagtt |
39040124 |
T |
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| Q |
144 |
tcttgtgataaaaaacaaattacaaactacattaaaatttggatcgttcgatcttgatccattgactgcaaatgtgttaaatgactgaatgggaaaaact |
243 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
39040123 |
tcttgtgataaaaaacaaattacaaactacattaaaatttggatcgttcgatcttgatccattgactgcaaatgtgttaaatgattgaatgggaaaaact |
39040024 |
T |
|
| Q |
244 |
tttaacaacaaggaatctcatttcacaggggtatgttaacattggttagaaaaatcaatcaaacatttgtaatgtagaa |
322 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39040023 |
tttaacaacaaggaatctcatttcgcaggggtatgttaacattggttagaaaaatcaatcaaacatttgtaatgtagaa |
39039945 |
T |
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