View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0810_high_33 (Length: 264)

Name: NF0810_high_33
Description: NF0810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0810_high_33
NF0810_high_33
[»] chr8 (1 HSPs)
chr8 (1-253)||(45457405-45457660)


Alignment Details
Target: chr8 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 45457660 - 45457405
Alignment:
Q  1 tatggtgaactagatcagtagcatatacccctacactacactacattatattacacgtatgaatatgatgatatcaatatcaacacatatgttatgatat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45457660 tatggtgaactagatcagtagcatatacccctacactacactacattatattacacgtatgaatatgatgatatcaatatcaacacatatgttatgatat 45457561  T
Q  101 tgactcacagtcaatcacaaacaacatgtgcattcattcagacatacatagtgatcttcacgttaatgtgaatcaattatattgtatctccttgatctgt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  45457560 tgactcacagtcaatcacaaacaacatgtgcattcattcagacatacatagtgatcttcacgttaatgtgaatcaattatattgtatcaccttgatctgt 45457461  T
Q  201 cactgtggacggacagcttattattatta---ttataattcatcccctcatttcat 253  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  45457460 cactgtggacggacagcttattattattattattataattcatcccctcatttcat 45457405  T

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