View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0810_high_4 (Length: 605)
Name: NF0810_high_4
Description: NF0810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0810_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 488; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 488; E-Value: 0
Query Start/End: Original strand, 96 - 599
Target Start/End: Original strand, 34077592 - 34078095
Alignment:
| Q |
96 |
gaatgaggaatggccctgctgggtgcatgcggaaagtttcacgtacaacacatcgtaggtaattaaggttaggcaaatcagattcaatcaccattctatt |
195 |
Q |
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| T |
34077592 |
gaatgaggaatggccctgctggatgcatgcggaaagtttcacgtacaacacatcgtaggtaattaaggttaggcaaatcagattcaatcaccattctatt |
34077691 |
T |
|
| Q |
196 |
agggccaaccactacatcaagctcttcttggattttgtgaaggacgtgtggatgtttgattacctctgtcatcgcccattcattagtaacggctgaagtg |
295 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34077692 |
agggccaaccactacatcaagctcttcttggattttgtgaagaacgtgtggatgtttgattacctctgtcatcgcccattcattagtaacggctgaagtg |
34077791 |
T |
|
| Q |
296 |
tccgttgcagccgcgatcatgtcctaaatatttagtataactacattattttcaatcattacatgaaaaattaaacaaaattaatagagaaaaagtcata |
395 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34077792 |
tctgttgcagccgcgatcatgtcctaaatatttagtataactacattattttcaatcattacatgaaaaattaaacaaaattaatagagaaaaagtcata |
34077891 |
T |
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| Q |
396 |
cctgaatcaaagcttttatctcaacatcatccatatgctcttttccatcttcaccaggcaaagacaataaaatatccacaaaatcaagttcttcatcact |
495 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34077892 |
cctgaatcaaagcttttatctcaacatcatccatatgctcttttccatcttcaccaggcaaagacaataaaatatccacaaaatcaagttcttcatcact |
34077991 |
T |
|
| Q |
496 |
ttttcctatccctttcttatctttccttgcctttctatgttcttcaagaattttggagtgaaagtcatcaactcttttttctacttccctcattttcatc |
595 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
34077992 |
ttttcctatccctttcttatctttccttgcctttctatgttcttcaagaattttggagtgaaagtcatcaactcttttttctacttccctcattttcttc |
34078091 |
T |
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| Q |
596 |
tcac |
599 |
Q |
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|||| |
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| T |
34078092 |
tcac |
34078095 |
T |
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