View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0811_low_23 (Length: 390)

Name: NF0811_low_23
Description: NF0811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0811_low_23
NF0811_low_23
[»] chr2 (66 HSPs)
chr2 (98-361)||(33222465-33222726)
chr2 (98-261)||(29407850-29408013)
chr2 (103-273)||(2271705-2271876)
chr2 (98-255)||(29406925-29407083)
chr2 (98-255)||(28139519-28139677)
chr2 (98-255)||(16544324-16544481)
chr2 (98-235)||(28138553-28138690)
chr2 (160-261)||(14002466-14002567)
chr2 (98-211)||(28419404-28419517)
chr2 (130-255)||(40156352-40156477)
chr2 (98-261)||(16544580-16544742)
chr2 (98-243)||(12252455-12252590)
chr2 (140-235)||(39489156-39489251)
chr2 (160-260)||(6232613-6232713)
chr2 (98-158)||(37294379-37294439)
chr2 (98-221)||(1728748-1728874)
chr2 (139-245)||(40221134-40221240)
chr2 (99-195)||(23266193-23266282)
chr2 (99-177)||(30271105-30271183)
chr2 (147-235)||(36510868-36510956)
chr2 (139-274)||(4286028-4286163)
chr2 (140-235)||(30803023-30803118)
chr2 (160-255)||(37322136-37322230)
chr2 (139-273)||(26543993-26544127)
chr2 (98-149)||(6232698-6232749)
chr2 (139-214)||(7189955-7190030)
chr2 (139-213)||(3943196-3943270)
chr2 (140-231)||(39489971-39490059)
chr2 (139-245)||(4286705-4286811)
chr2 (140-235)||(10424812-10424907)
chr2 (98-149)||(14002552-14002603)
chr2 (140-235)||(29947740-29947835)
chr2 (98-149)||(37322100-37322151)
chr2 (160-261)||(36652853-36652954)
chr2 (160-213)||(43976847-43976900)
chr2 (140-274)||(30801977-30802108)
chr2 (166-274)||(40220573-40220681)
chr2 (143-211)||(43870129-43870197)
chr2 (99-174)||(30273114-30273189)
chr2 (140-220)||(38779648-38779725)
chr2 (139-211)||(17424128-17424201)
chr2 (139-220)||(43258737-43258818)
chr2 (187-235)||(3086009-3086057)
chr2 (139-215)||(10825211-10825287)
chr2 (139-211)||(23346777-23346849)
chr2 (139-235)||(28477071-28477167)
chr2 (187-235)||(29074055-29074103)
chr2 (135-214)||(2917677-2917756)
chr2 (139-245)||(2983362-2983469)
chr2 (140-273)||(28420222-28420352)
chr2 (187-254)||(33416083-33416150)
chr2 (135-230)||(41566165-41566260)
chr2 (160-214)||(24607593-24607647)
chr2 (133-235)||(29401603-29401705)
chr2 (140-220)||(38340857-38340934)
chr2 (135-173)||(39393072-39393110)
chr2 (140-214)||(45475434-45475508)
chr2 (194-250)||(3803602-3803659)
chr2 (140-213)||(10425824-10425897)
chr2 (139-235)||(22003405-22003502)
chr2 (193-250)||(43313417-43313474)
chr2 (193-261)||(7779591-7779659)
chr2 (139-211)||(23347332-23347404)
chr2 (140-214)||(29600757-29600828)
chr2 (187-235)||(29601197-29601245)
chr2 (139-183)||(41004553-41004597)
[»] chr4 (60 HSPs)
chr4 (98-273)||(18884467-18884642)
chr4 (98-255)||(48807349-48807506)
chr4 (98-278)||(43176591-43176771)
chr4 (98-255)||(48806438-48806595)
chr4 (101-261)||(11565813-11565973)
chr4 (98-261)||(2449575-2449734)
chr4 (112-270)||(20208448-20208606)
chr4 (147-269)||(27872318-27872440)
chr4 (98-255)||(37856707-37856864)
chr4 (160-275)||(37855792-37855907)
chr4 (112-270)||(52469020-52469178)
chr4 (140-235)||(14200534-14200629)
chr4 (140-235)||(40833615-40833710)
chr4 (140-232)||(46254453-46254545)
chr4 (131-235)||(51037464-51037568)
chr4 (134-245)||(4783609-4783720)
chr4 (100-158)||(6092720-6092778)
chr4 (140-254)||(38369187-38369301)
chr4 (140-237)||(50446979-50447076)
chr4 (139-235)||(21022892-21022988)
chr4 (98-149)||(2449009-2449060)
chr4 (98-149)||(37855892-37855943)
chr4 (140-235)||(14201535-14201627)
chr4 (168-245)||(37296218-37296295)
chr4 (114-230)||(20209306-20209422)
chr4 (140-235)||(40832619-40832711)
chr4 (139-214)||(16983516-16983591)
chr4 (199-270)||(18411136-18411207)
chr4 (140-235)||(23220651-23220746)
chr4 (98-149)||(37296174-37296225)
chr4 (179-274)||(43175668-43175763)
chr4 (139-214)||(9655913-9655985)
chr4 (140-275)||(36480545-36480677)
chr4 (140-235)||(46253459-46253551)
chr4 (139-211)||(55793916-55793989)
chr4 (132-211)||(21018001-21018081)
chr4 (140-242)||(21343382-21343481)
chr4 (139-214)||(16984165-16984240)
chr4 (187-258)||(21015689-21015760)
chr4 (140-211)||(28235566-28235637)
chr4 (139-230)||(32365945-32366036)
chr4 (131-214)||(39590564-39590647)
chr4 (166-273)||(40061192-40061299)
chr4 (145-245)||(28322130-28322227)
chr4 (139-211)||(32538329-32538398)
chr4 (140-235)||(23221675-23221767)
chr4 (140-275)||(28157514-28157646)
chr4 (140-235)||(38368204-38368296)
chr4 (194-250)||(3403805-3403861)
chr4 (155-211)||(28081455-28081511)
chr4 (98-146)||(43175769-43175817)
chr4 (140-213)||(12375983-12376053)
chr4 (160-250)||(28084015-28084103)
chr4 (140-213)||(46169206-46169276)
chr4 (201-275)||(8111481-8111555)
chr4 (135-211)||(35631163-35631236)
chr4 (139-250)||(15999803-15999915)
chr4 (139-235)||(26932556-26932653)
chr4 (139-192)||(33383822-33383874)
chr4 (139-183)||(26791674-26791718)
[»] chr8 (91 HSPs)
chr8 (100-261)||(13782182-13782343)
chr8 (98-255)||(40740859-40741016)
chr8 (98-255)||(34892772-34892929)
chr8 (98-250)||(13783071-13783223)
chr8 (98-245)||(16940239-16940386)
chr8 (98-245)||(7121749-7121896)
chr8 (103-272)||(43520744-43520913)
chr8 (98-250)||(36595909-36596061)
chr8 (100-255)||(16939333-16939488)
chr8 (98-255)||(29034002-29034159)
chr8 (98-255)||(37656769-37656925)
chr8 (98-261)||(7120847-7121010)
chr8 (98-230)||(35206623-35206755)
chr8 (98-244)||(3086394-3086540)
chr8 (102-272)||(41471029-41471198)
chr8 (100-196)||(39512325-39512421)
chr8 (156-261)||(34891957-34892062)
chr8 (160-261)||(39513212-39513313)
chr8 (139-270)||(39277465-39277596)
chr8 (140-261)||(28694025-28694146)
chr8 (100-255)||(31745135-31745290)
chr8 (98-196)||(39207649-39207746)
chr8 (139-275)||(41016347-41016483)
chr8 (160-235)||(3085514-3085589)
chr8 (140-235)||(5533030-5533125)
chr8 (160-255)||(36345930-36346025)
chr8 (160-255)||(38134137-38134232)
chr8 (160-243)||(39583318-39583401)
chr8 (172-255)||(41472051-41472134)
chr8 (100-274)||(42731765-42731933)
chr8 (140-232)||(38604253-38604345)
chr8 (100-171)||(20861868-20861939)
chr8 (140-235)||(27501573-27501668)
chr8 (140-235)||(28617541-28617636)
chr8 (140-235)||(32584025-32584120)
chr8 (98-149)||(36345894-36345945)
chr8 (98-145)||(39513176-39513223)
chr8 (166-273)||(39831091-39831198)
chr8 (140-235)||(44933832-44933927)
chr8 (99-149)||(38134102-38134152)
chr8 (135-277)||(43363260-43363402)
chr8 (140-249)||(12206683-12206792)
chr8 (140-249)||(12451111-12451220)
chr8 (140-235)||(38603286-38603378)
chr8 (98-150)||(41471999-41472051)
chr8 (140-232)||(44841879-44841971)
chr8 (140-235)||(2335153-2335248)
chr8 (140-245)||(3695333-3695435)
chr8 (139-214)||(18441445-18441520)
chr8 (98-149)||(22961467-22961518)
chr8 (160-235)||(22961503-22961578)
chr8 (157-276)||(44885648-44885766)
chr8 (99-177)||(3641677-3641755)
chr8 (160-214)||(37655931-37655985)
chr8 (98-148)||(37655971-37656021)
chr8 (140-235)||(27502573-27502665)
chr8 (139-211)||(22550869-22550941)
chr8 (164-270)||(23508535-23508638)
chr8 (98-149)||(3085574-3085625)
chr8 (166-245)||(20854580-20854659)
chr8 (131-214)||(34366905-34366988)
chr8 (98-149)||(35205873-35205924)
chr8 (199-234)||(39582498-39582533)
chr8 (140-241)||(40745289-40745387)
chr8 (201-274)||(6269046-6269118)
chr8 (193-274)||(12207263-12207344)
chr8 (193-274)||(12451691-12451772)
chr8 (182-255)||(39208388-39208461)
chr8 (139-212)||(39601700-39601773)
chr8 (140-211)||(44886805-44886873)
chr8 (153-235)||(32585011-32585090)
chr8 (140-214)||(43519899-43519970)
chr8 (217-276)||(6013835-6013894)
chr8 (140-245)||(36344969-36345071)
chr8 (140-175)||(39582524-39582559)
chr8 (140-274)||(36127306-36127440)
chr8 (217-275)||(37651749-37651807)
chr8 (139-235)||(15030856-15030953)
chr8 (139-176)||(28645405-28645442)
chr8 (140-177)||(28646252-28646289)
chr8 (139-176)||(28649989-28650026)
chr8 (140-177)||(28650836-28650873)
chr8 (194-235)||(31185504-31185545)
chr8 (193-278)||(41858455-41858540)
chr8 (135-220)||(44727505-44727589)
chr8 (100-149)||(44885748-44885797)
chr8 (193-273)||(20859662-20859742)
chr8 (140-274)||(21248110-21248240)
chr8 (151-213)||(23512780-23512839)
chr8 (193-277)||(37328862-37328946)
chr8 (139-211)||(42602457-42602529)
[»] chr3 (91 HSPs)
chr3 (98-254)||(45076212-45076369)
chr3 (98-261)||(32592164-32592327)
chr3 (98-255)||(7941063-7941220)
chr3 (98-252)||(32593075-32593229)
chr3 (98-255)||(10658776-10658933)
chr3 (98-254)||(6143625-6143781)
chr3 (98-245)||(11270247-11270394)
chr3 (98-269)||(20485494-20485670)
chr3 (98-229)||(45075325-45075456)
chr3 (103-273)||(19842439-19842608)
chr3 (100-275)||(14043863-14044038)
chr3 (117-255)||(2062339-2062477)
chr3 (98-233)||(7941969-7942103)
chr3 (98-245)||(4274913-4275060)
chr3 (98-273)||(26494466-26494634)
chr3 (160-261)||(32743154-32743255)
chr3 (98-183)||(51755813-51755898)
chr3 (139-273)||(1294081-1294215)
chr3 (160-274)||(50330546-50330660)
chr3 (140-233)||(34543141-34543234)
chr3 (140-235)||(12897797-12897892)
chr3 (140-235)||(19988432-19988527)
chr3 (140-235)||(27739572-27739667)
chr3 (140-235)||(28817006-28817101)
chr3 (98-153)||(30294835-30294890)
chr3 (190-269)||(51755609-51755688)
chr3 (140-245)||(52514254-52514356)
chr3 (166-244)||(4274050-4274128)
chr3 (139-245)||(34645525-34645631)
chr3 (98-187)||(31890205-31890294)
chr3 (100-175)||(6525283-6525358)
chr3 (98-149)||(32743240-32743291)
chr3 (135-214)||(55385131-55385210)
chr3 (140-235)||(11095092-11095184)
chr3 (140-235)||(26245308-26245400)
chr3 (160-241)||(39999578-39999659)
chr3 (139-211)||(4008327-4008399)
chr3 (163-255)||(4330745-4330835)
chr3 (139-207)||(9582548-9582616)
chr3 (98-158)||(20484682-20484742)
chr3 (135-235)||(50998680-50998780)
chr3 (140-273)||(11248492-11248622)
chr3 (140-235)||(11249529-11249624)
chr3 (166-273)||(17561694-17561801)
chr3 (139-214)||(43478834-43478909)
chr3 (139-214)||(48246406-48246481)
chr3 (139-214)||(52570570-52570645)
chr3 (130-220)||(4331815-4331905)
chr3 (99-149)||(34722284-34722334)
chr3 (140-232)||(2645431-2645524)
chr3 (139-211)||(2647703-2647776)
chr3 (139-235)||(3493561-3493658)
chr3 (139-235)||(3497255-3497352)
chr3 (140-233)||(10492002-10492095)
chr3 (139-250)||(2743355-2743467)
chr3 (140-232)||(11094088-11094179)
chr3 (132-244)||(24703412-24703524)
chr3 (135-214)||(7247860-7247939)
chr3 (160-222)||(19750028-19750090)
chr3 (139-212)||(41802994-41803067)
chr3 (103-149)||(50330645-50330691)
chr3 (139-220)||(8475814-8475895)
chr3 (139-212)||(16484460-16484533)
chr3 (139-245)||(10492877-10492980)
chr3 (140-184)||(14042944-14042988)
chr3 (150-220)||(42148283-42148350)
chr3 (139-211)||(42166414-42166486)
chr3 (139-214)||(43476185-43476261)
chr3 (139-214)||(600548-600623)
chr3 (139-214)||(28611104-28611179)
chr3 (140-245)||(32744157-32744259)
chr3 (145-226)||(40798235-40798313)
chr3 (147-220)||(40798976-40799046)
chr3 (140-220)||(6144303-6144380)
chr3 (166-272)||(16861065-16861171)
chr3 (187-261)||(17568012-17568086)
chr3 (139-213)||(19440251-19440325)
chr3 (140-220)||(21343499-21343576)
chr3 (180-254)||(30294899-30294973)
chr3 (131-207)||(50122383-50122456)
chr3 (153-250)||(13743251-13743348)
chr3 (197-234)||(19750075-19750112)
chr3 (140-215)||(40877804-40877876)
chr3 (139-212)||(52567759-52567832)
chr3 (139-176)||(55176352-55176389)
chr3 (155-235)||(4002713-4002793)
chr3 (139-211)||(4015133-4015205)
chr3 (140-184)||(11269332-11269376)
chr3 (139-211)||(36134320-36134392)
chr3 (98-146)||(39999542-39999590)
chr3 (193-273)||(55282870-55282950)
[»] chr5 (44 HSPs)
chr5 (102-274)||(30192426-30192598)
chr5 (100-255)||(41623013-41623168)
chr5 (98-243)||(35671047-35671192)
chr5 (98-274)||(40789170-40789346)
chr5 (98-270)||(2169626-2169797)
chr5 (98-207)||(35282357-35282472)
chr5 (144-239)||(2170564-2170659)
chr5 (139-273)||(13838428-13838562)
chr5 (160-261)||(41622120-41622221)
chr5 (98-175)||(42912841-42912918)
chr5 (168-259)||(35672038-35672129)
chr5 (155-273)||(8539536-8539654)
chr5 (140-235)||(3891456-3891551)
chr5 (135-235)||(3892440-3892537)
chr5 (140-261)||(18512178-18512297)
chr5 (155-272)||(11348495-11348612)
chr5 (139-255)||(5729-5845)
chr5 (168-261)||(35564208-35564301)
chr5 (98-185)||(30966607-30966693)
chr5 (160-214)||(20744018-20744072)
chr5 (98-147)||(41622208-41622257)
chr5 (165-245)||(18155472-18155551)
chr5 (166-273)||(38408498-38408605)
chr5 (103-149)||(20743987-20744033)
chr5 (139-211)||(30708899-30708972)
chr5 (217-274)||(35651349-35651406)
chr5 (187-235)||(14715-14763)
chr5 (194-274)||(5196978-5197058)
chr5 (135-207)||(11346008-11346080)
chr5 (139-175)||(38971626-38971662)
chr5 (139-214)||(7757319-7757394)
chr5 (139-214)||(7762248-7762323)
chr5 (139-214)||(17966890-17966965)
chr5 (139-214)||(33993274-33993349)
chr5 (98-149)||(35671994-35672045)
chr5 (139-213)||(38855715-38855790)
chr5 (193-242)||(8679529-8679578)
chr5 (140-211)||(8680251-8680319)
chr5 (193-250)||(13563625-13563682)
chr5 (139-235)||(27659912-27660009)
chr5 (139-183)||(18538339-18538383)
chr5 (139-179)||(27532621-27532661)
chr5 (98-126)||(30966171-30966199)
chr5 (135-183)||(41201753-41201801)
[»] chr7 (74 HSPs)
chr7 (98-278)||(11885889-11886068)
chr7 (98-275)||(14102311-14102488)
chr7 (98-275)||(14412328-14412505)
chr7 (98-255)||(38555376-38555533)
chr7 (98-261)||(47751148-47751310)
chr7 (98-255)||(13644374-13644531)
chr7 (103-273)||(19072372-19072542)
chr7 (98-244)||(13645305-13645451)
chr7 (154-274)||(30846814-30846934)
chr7 (160-275)||(14101381-14101496)
chr7 (160-275)||(14411398-14411513)
chr7 (99-231)||(48001339-48001467)
chr7 (161-273)||(7974874-7974986)
chr7 (142-255)||(11886891-11887004)
chr7 (139-235)||(17840894-17840990)
chr7 (140-255)||(12210595-12210710)
chr7 (139-254)||(36781453-36781568)
chr7 (145-245)||(29097870-29097967)
chr7 (165-274)||(38555024-38555133)
chr7 (140-235)||(49140629-49140721)
chr7 (135-245)||(38266104-38266211)
chr7 (140-235)||(7042-7137)
chr7 (135-273)||(31324806-31324943)
chr7 (98-149)||(38555123-38555174)
chr7 (140-245)||(48000184-48000286)
chr7 (99-149)||(30845984-30846034)
chr7 (140-270)||(31322987-31323117)
chr7 (135-235)||(42582088-42582185)
chr7 (142-254)||(12027294-12027405)
chr7 (135-214)||(9494806-9494885)
chr7 (98-149)||(31513002-31513053)
chr7 (140-235)||(42583065-42583160)
chr7 (187-274)||(47521351-47521438)
chr7 (135-235)||(49141621-49141718)
chr7 (154-235)||(10524376-10524457)
chr7 (194-235)||(42795139-42795180)
chr7 (140-235)||(46907512-46907604)
chr7 (140-232)||(8052-8144)
chr7 (139-211)||(17834484-17834556)
chr7 (194-250)||(34139728-34139784)
chr7 (166-273)||(37345134-37345241)
chr7 (139-231)||(38857080-38857172)
chr7 (140-274)||(48901447-48901578)
chr7 (147-220)||(7953772-7953842)
chr7 (275-318)||(21450123-21450166)
chr7 (160-235)||(27657011-27657086)
chr7 (145-241)||(12080388-12080481)
chr7 (145-245)||(29113122-29113219)
chr7 (154-212)||(46738798-46738856)
chr7 (153-235)||(46908491-46908573)
chr7 (145-245)||(47750490-47750587)
chr7 (189-274)||(38489293-38489378)
chr7 (140-235)||(42794169-42794261)
chr7 (153-243)||(25195239-25195326)
chr7 (139-183)||(29112398-29112442)
chr7 (155-235)||(45258024-45258104)
chr7 (139-214)||(10705242-10705317)
chr7 (98-149)||(14101481-14101532)
chr7 (98-149)||(14411498-14411549)
chr7 (160-243)||(30845916-30845999)
chr7 (140-183)||(45446674-45446717)
chr7 (167-275)||(12081228-12081333)
chr7 (193-274)||(48589739-48589820)
chr7 (139-243)||(8522140-8522244)
chr7 (139-175)||(11629765-11629801)
chr7 (187-235)||(13921316-13921364)
chr7 (139-183)||(19044318-19044362)
chr7 (139-183)||(20710274-20710318)
chr7 (193-273)||(27658031-27658111)
chr7 (98-126)||(30846789-30846817)
chr7 (135-179)||(34742395-34742439)
chr7 (135-183)||(42025085-42025133)
chr7 (139-175)||(42684200-42684236)
chr7 (139-175)||(42795117-42795153)
[»] chr1 (73 HSPs)
chr1 (98-261)||(13761007-13761170)
chr1 (98-250)||(5329977-5330129)
chr1 (98-254)||(12628098-12628248)
chr1 (98-209)||(18609858-18609969)
chr1 (98-242)||(21268729-21268880)
chr1 (98-172)||(41908978-41909052)
chr1 (110-207)||(41909680-41909777)
chr1 (160-270)||(4208334-4208444)
chr1 (157-235)||(42290269-42290347)
chr1 (166-273)||(50036782-50036890)
chr1 (140-235)||(586610-586705)
chr1 (160-255)||(12627192-12627287)
chr1 (140-245)||(26769129-26769231)
chr1 (140-235)||(30194394-30194489)
chr1 (173-254)||(42290810-42290891)
chr1 (160-260)||(7942922-7943022)
chr1 (140-235)||(4883206-4883301)
chr1 (160-255)||(5329076-5329171)
chr1 (98-149)||(12627272-12627323)
chr1 (100-171)||(15695831-15695902)
chr1 (98-149)||(42290329-42290380)
chr1 (139-274)||(45780167-45780298)
chr1 (139-220)||(7820118-7820196)
chr1 (148-235)||(19914439-19914526)
chr1 (148-221)||(28456734-28456804)
chr1 (140-273)||(46909583-46909713)
chr1 (139-233)||(19161867-19161961)
chr1 (139-273)||(44470015-44470149)
chr1 (139-211)||(13636126-13636199)
chr1 (165-250)||(48228332-48228417)
chr1 (100-145)||(48455531-48455576)
chr1 (139-211)||(29424377-29424449)
chr1 (135-211)||(41804033-41804109)
chr1 (135-214)||(49927513-49927592)
chr1 (98-149)||(5329156-5329207)
chr1 (167-278)||(21140955-21141066)
chr1 (139-214)||(29438024-29438099)
chr1 (166-272)||(36184316-36184423)
chr1 (140-221)||(37992555-37992633)
chr1 (140-245)||(47653712-47653814)
chr1 (140-245)||(49502827-49502929)
chr1 (125-231)||(6562857-6562963)
chr1 (135-270)||(13535629-13535755)
chr1 (99-196)||(13760780-13760876)
chr1 (98-144)||(21699939-21699985)
chr1 (196-250)||(29356733-29356787)
chr1 (132-185)||(13147519-13147572)
chr1 (139-211)||(19159619-19159692)
chr1 (194-235)||(43011800-43011841)
chr1 (139-212)||(44598910-44598983)
chr1 (194-235)||(47652700-47652741)
chr1 (157-194)||(48455508-48455545)
chr1 (165-270)||(49395541-49395646)
chr1 (193-245)||(19915373-19915425)
chr1 (139-211)||(46217322-46217394)
chr1 (140-184)||(49875344-49875388)
chr1 (140-183)||(1167587-1167630)
chr1 (193-244)||(13149069-13149120)
chr1 (140-187)||(17514730-17514777)
chr1 (139-214)||(51271595-51271670)
chr1 (139-177)||(1656093-1656131)
chr1 (131-173)||(11828196-11828238)
chr1 (139-243)||(26770557-26770658)
chr1 (140-208)||(28456453-28456518)
chr1 (160-274)||(47505910-47506024)
chr1 (140-275)||(18609027-18609159)
chr1 (153-214)||(29765547-29765608)
chr1 (135-184)||(39895019-39895068)
chr1 (139-212)||(46141778-46141851)
chr1 (139-180)||(47586241-47586282)
chr1 (140-184)||(23442295-23442339)
chr1 (139-211)||(29425340-29425412)
chr1 (160-220)||(42572782-42572842)
[»] scaffold0092 (1 HSPs)
scaffold0092 (98-261)||(54512-54675)
[»] scaffold0019 (2 HSPs)
scaffold0019 (103-242)||(127467-127606)
scaffold0019 (140-213)||(134319-134389)
[»] scaffold0065 (1 HSPs)
scaffold0065 (122-255)||(65270-65404)
[»] chr6 (35 HSPs)
chr6 (100-273)||(15888765-15888937)
chr6 (98-172)||(15546352-15546426)
chr6 (150-242)||(35177569-35177661)
chr6 (98-173)||(11157771-11157846)
chr6 (98-173)||(35096673-35096748)
chr6 (165-270)||(32034396-32034501)
chr6 (135-255)||(11157663-11157783)
chr6 (140-242)||(15545696-15545795)
chr6 (98-177)||(17338727-17338806)
chr6 (121-207)||(9049070-9049156)
chr6 (149-235)||(25554678-25554764)
chr6 (151-235)||(2109490-2109574)
chr6 (139-211)||(9048072-9048144)
chr6 (194-235)||(13158408-13158449)
chr6 (194-235)||(13163264-13163305)
chr6 (139-211)||(22305104-22305177)
chr6 (139-212)||(29097832-29097905)
chr6 (140-235)||(6760877-6760972)
chr6 (98-149)||(11159394-11159445)
chr6 (140-270)||(14124723-14124853)
chr6 (140-214)||(19757266-19757340)
chr6 (140-235)||(13164265-13164357)
chr6 (140-208)||(14012380-14012448)
chr6 (139-211)||(32223517-32223589)
chr6 (139-206)||(11840254-11840321)
chr6 (139-273)||(28249819-28249954)
chr6 (139-213)||(32643525-32643599)
chr6 (98-147)||(117858-117907)
chr6 (193-274)||(456099-456180)
chr6 (139-235)||(13382601-13382698)
chr6 (194-255)||(35096624-35096685)
chr6 (140-214)||(17337645-17337716)
chr6 (139-211)||(29076327-29076399)
chr6 (139-211)||(29109860-29109932)
chr6 (139-211)||(29111300-29111372)
[»] scaffold1379 (1 HSPs)
scaffold1379 (99-215)||(398-514)
[»] scaffold0016 (1 HSPs)
scaffold0016 (140-235)||(69226-69321)
[»] scaffold0283 (3 HSPs)
scaffold0283 (157-276)||(1635-1753)
scaffold0283 (140-211)||(528-596)
scaffold0283 (100-149)||(1604-1653)
[»] scaffold0188 (1 HSPs)
scaffold0188 (139-250)||(27920-28031)
[»] scaffold0176 (1 HSPs)
scaffold0176 (194-250)||(653-709)
[»] scaffold0341 (1 HSPs)
scaffold0341 (125-231)||(18047-18153)
[»] scaffold0101 (1 HSPs)
scaffold0101 (139-211)||(36538-36611)
[»] scaffold0199 (2 HSPs)
scaffold0199 (139-211)||(12392-12464)
scaffold0199 (139-235)||(10625-10721)
[»] scaffold0184 (1 HSPs)
scaffold0184 (139-211)||(18297-18369)
[»] scaffold0078 (1 HSPs)
scaffold0078 (139-211)||(54475-54547)
[»] scaffold0494 (1 HSPs)
scaffold0494 (139-213)||(5325-5400)
[»] scaffold0038 (1 HSPs)
scaffold0038 (139-273)||(49981-50116)
[»] scaffold0417 (1 HSPs)
scaffold0417 (140-174)||(14582-14616)
[»] scaffold0388 (1 HSPs)
scaffold0388 (140-210)||(13914-13984)


Alignment Details
Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 98 - 361
Target Start/End: Complemental strand, 33222726 - 33222465
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  33222726 ggtgtatttccttatttaatttcaggtttgaaattcctcggcagttaactgccgaagttttcctcggcagttaactgcagccggttctttaaaatttcgg 33222627  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctcatcttgtattgttatgtcaagaac 297  Q
     |||||||||||||||   |||||| |||||||||||| ||||||||| ||||||||| | |||  | |||| |||||||||||||||||||||||||||    
T  33222626 tagttaactgccgaggagcatttgagtaatttactcgtgtttctcagccaaaccaaatgtatca--agcaatactcatcttgtattgttatgtcaagaac 33222529  T
Q  298 ttaccttttagcatatcaaaccaaacaaatctcaatcaattttgtgctaaacctctacacaaat 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33222528 ttaccttttagcatatcaaaccaaacaaatctcaatcaattttgtgctaaacctctacacaaat 33222465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 98 - 261
Target Start/End: Original strand, 29407850 - 29408013
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||  |||||||||||| ||||||||||||||||||     
T  29407850 ggtgtatttccttatttaatttcaggtttgaaattcctcggcagttaactgccgaagttttcctcgttagttaactgcagccggttctttaaaatttcga 29407949  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtca 261  Q
    |||||||||||||||||| |||||| |||||||||| ||||||||| ||||||||||| |||||    
T  29407950 cagttaactgccgagggacatttgagtaatttactcatatttctcaactaaaccaaatgtgtca 29408013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 103 - 273
Target Start/End: Original strand, 2271705 - 2271876
Alignment:
Q  103 atttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagtt 202  Q
    ||||||||||||||||||| ||||||||||  ||| |||||||||||||||||||| ||||||||||||||||||  | |||||||||||||||||||||    
T  2271705 atttccttatttaatttcatgtttgaaatttctcggcagttaactgccgaagttttcctcgacagttaactgcagctgattctttaaaatttcggcagtt 2271804  T
Q  203 aactgccgagggatatttgaataatttactcgtatttctcagctaaac-caaatatgtcagcatcaattctc 273  Q
    ||| |||||||| ||||||| |||||||||||| || |||||| |||| ||||| ||| | |||||||||||    
T  2271805 aacggccgaggggtatttgagtaatttactcgtgttcctcagccaaactcaaatgtgtgaacatcaattctc 2271876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 98 - 255
Target Start/End: Complemental strand, 29407083 - 29406925
Alignment:
Q  98 ggtgtatttccttatttaatttcaggttt-gaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcg 196  Q
    ||||||||| ||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||| ||||||| ||||| ||||||||||||||||||    
T  29407083 ggtgtatttacttatttaatttcaggttttgaaattcttcggcagttaactgccgaagttttcctcggcagttaattgcagccggttctttaaaatttcg 29406984  T
Q  197 gcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    ||||||||||||||| || ||| ||  ||| |||||||| ||||||||| |||||||||    
T  29406983 gcagttaactgccgaagggtatctgggtaaattactcgtgtttctcagccaaaccaaat 29406925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 98 - 255
Target Start/End: Original strand, 28139519 - 28139677
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcg-gttctttaaaatttcg 196  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||| |||| ||||||| ||||| ||  || ||||||||||||    
T  28139519 ggtgtatttccttatttaatttcaggtttgaaattcctcagcagttaactgccgaagttttcctcggcagttaaatgcagccgatttttttaaaatttcg 28139618  T
Q  197 gcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    | ||||||||| ||| || ||||||||||| |||||||| ||||||||| ||| |||||    
T  28139619 gtagttaactgtcgaagggtatttgaataaattactcgtgtttctcagccaaatcaaat 28139677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 98 - 255
Target Start/End: Complemental strand, 16544481 - 16544324
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||| ||||||||||| ||| |||||| ||||||||||||  ||||| |||||| ||||  |||||||||||||||||||    
T  16544481 ggtgtatttccttatttaatttcatgtttgaaattcctcggcagttagctgccgaagtttccctcgagagttaagtgcaaccggttctttaaaatttcgg 16544382  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    || ||||||| ||| ||||||||  |||| |||||||| |||||| || |||||||||    
T  16544381 caattaactgtcgaaggatatttagataaattactcgtgtttctcggccaaaccaaat 16544324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 98 - 235
Target Start/End: Complemental strand, 28138690 - 28138553
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    ||||||||| |||||||||||| || |||||||||| ||| |||||||||||||||||||| |||| ||||||| ||||  |||||||||||||||||||    
T  28138690 ggtgtattttcttatttaattttagatttgaaattcctcggcagttaactgccgaagttttcctcggcagttaattgcaaccggttctttaaaatttcgg 28138591  T
Q  198 cagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||||||| | |||||  |||||||||||||||||||    
T  28138590 cagttaactactgaggggcatttgaataatttactcgt 28138553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 14002567 - 14002466
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgt 259  Q
    |||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| ||||||||| ||||||||| |||    
T  14002567 ctcggcagttaactgcagccggttctttaaaatttcagcagttaactgccgagggacatttgagtaatttactcgtgtttctcagccaaaccaaatgtgt 14002468  T
Q  260 ca 261  Q
    ||    
T  14002467 ca 14002466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 98 - 211
Target Start/End: Complemental strand, 28419517 - 28419404
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||  |||||||| | | |||||   ||||| |||||    
T  28419517 ggtgtatttccttatttaatttcaggtttgaaattcatcggcagttaactgccgaagttttcctcggtagttaactaccgccggtttactaaaacttcgg 28419418  T
Q  198 cagttaactgccga 211  Q
    ||||||||||||||    
T  28419417 cagttaactgccga 28419404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 130 - 255
Target Start/End: Complemental strand, 40156477 - 40156352
Alignment:
Q  130 attcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataattt 229  Q
    |||| ||| |||||||||| ||||||||| |||| ||||||||||||| ||||| || |||||||||||| ||||||| ||||||  |||||| ||||||    
T  40156477 attcctcggcagttaactgtcgaagttttcctcgtcagttaactgcagccggtttttcaaaatttcggcaattaactgtcgaggggcatttgagtaattt 40156378  T
Q  230 actcgtatttctcagctaaaccaaat 255  Q
    |||||| ||||||||| |||||||||    
T  40156377 actcgtgtttctcagccaaaccaaat 40156352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 98 - 261
Target Start/End: Original strand, 16544580 - 16544742
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    ||||||||| ||||||||  ||||| |||||||||| ||| ||| |||||| ||||||||| |||  |||| |||||||| |||||||||||||||| |     
T  16544580 ggtgtattttcttatttatattcagatttgaaattcctcggcagataactgtcgaagttttcctcagcagt-aactgcagccggttctttaaaattttga 16544678  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtca 261  Q
    ||||||| || ||||||| |||||| ||||||||| || ||| |||   |||||||||||||||    
T  16544679 cagttaattgtcgagggacatttgagtaatttacttgtgtttttcaatcaaaccaaatatgtca 16544742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 98 - 243
Target Start/End: Original strand, 12252455 - 12252590
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||          ||||| ||||  |||||||||||| ||||||||||||||||||     
T  12252455 ggtgtatttccttatttaatttcaggtttgaaattcctcggcagtt----------gttttcctcggaagttaactgcagccggttctttaaaatttcga 12252544  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctca 243  Q
    |||||||||||||| ||| |||||| ||||||| | || |||||||    
T  12252545 cagttaactgccgaaggacatttgagtaatttatttgtgtttctca 12252590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 39489251 - 39489156
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||||||||||||||||||||  | | ||||| ||||||||||||||||||| || ||||||| ||||||||||||    
T  39489251 agtttactgccgaagttttcctcgacagttaactgcagtcgtatttgtaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgt 39489156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 6232713 - 6232613
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgt 259  Q
    |||| ||||||||||||| ||||||||||||||||| ||||||||||| ||||  | |||||| |||||||| | |||||||| || |||||||||||||    
T  6232713 ctcggcagttaactgcagccggttctttaaaatttcagcagttaactgtcgagaaacatttgagtaatttacccatatttctctgccaaaccaaatatgt 6232614  T
Q  260 c 260  Q
    |    
T  6232613 c 6232613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 37294439 - 37294379
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttt 158  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  37294439 ggtgtatttccttatttaatttcaggtttgaaattcttcggcagttaactgccgaagtttt 37294379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 98 - 221
Target Start/End: Complemental strand, 1728874 - 1728748
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcga-------cagttaactgcagtcggttctttaaa 190  Q
    |||||||||||||||||||||||||||||||||||| ||| |    ||||||||||||||| |||||       ||||||||||||  ||||||||||||    
T  1728874 ggtgtatttccttatttaatttcaggtttgaaattcttcggc----aactgccgaagttttcctcgacaatcggcagttaactgcaaccggttctttaaa 1728779  T
Q  191 atttcggcagttaactgccgagggatatttg 221  Q
    ||||| | |||||||||| || |||||||||    
T  1728778 atttcagaagttaactgctgaaggatatttg 1728748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 139 - 245
Target Start/End: Original strand, 40221134 - 40221240
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggt-tctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtat 237  Q
    |||||||||||||| ||||| ||||  |||||||||||| |||| |||||| |||| |||||||||||||||||||||||||| | |||||||||||| |    
T  40221134 cagttaactgccgaggttttcctcggtagttaactgcagccggtgtctttagaatt-cggcagttaactgccgagggatatttaagtaatttactcgtgt 40221232  T
Q  238 ttctcagc 245  Q
     |||||||    
T  40221233 atctcagc 40221240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 23266193 - 23266282
Alignment:
Q  99 gtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttc 195  Q
    ||||||||||||||||||||||||||||||||||| ||| |       |||||||||||| |||| ||||||||||||| |||||||||||||||||    
T  23266193 gtgtatttccttatttaatttcaggtttgaaattcctcggc-------tgccgaagttttcctcggcagttaactgcagccggttctttaaaatttc 23266282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 30271183 - 30271105
Alignment:
Q  99 gtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcag 177  Q
    |||||||||||||||||||||||||||| || ||| ||||||||||||| |||||||||| |||  |||||||||||||    
T  30271183 gtgtatttccttatttaatttcaggttttaagttcttcgacagttaactaccgaagttttcctcagcagttaactgcag 30271105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 147 - 235
Target Start/End: Original strand, 36510868 - 36510956
Alignment:
Q  147 tgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||||||||||| |||| ||||||||||||| ||  | | ||||| |||||||||||||||||||||| ||||||| ||||||||||||    
T  36510868 tgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgt 36510956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 274
Target Start/End: Complemental strand, 4286163 - 4286028
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatt 238  Q
    |||||||||| ||| |||||| | |  ||||||||||| ||||||  || | | ||||||||||||||||||| || ||||||| |||||||||||| ||    
T  4286163 cagttaactgtcgaggttttttttggtagttaactgcaatcggtttcttcagaattcggcagttaactgccgatgggtatttgagtaatttactcgtgtt 4286064  T
Q  239 tctcagctaaaccaaatatgtcagcatcaattctca 274  Q
    ||||||| |||| | || ||||| || |||||||||    
T  4286063 tctcagccaaacaacatgtgtcaacaacaattctca 4286028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 30803023 - 30803118
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||| ||||||||| |||| ||||||||||||| ||  | | ||||| ||||||||||||||||||||||| |||||| ||||||||||||    
T  30803023 agtttactgtcgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgagggacatttgagtaatttactcgt 30803118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 255
Target Start/End: Original strand, 37322136 - 37322230
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    |||| ||||||||||||| |||||||| |||||||||||||||||||||||||||  |||||| ||||||| |||| ||| ||||| ||| |||||    
T  37322136 ctcggcagttaactgcagccggttcttcaaaatttcggcagttaactgccgaggg-catttgagtaatttattcgtgtttttcagccaaatcaaat 37322230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 139 - 273
Target Start/End: Original strand, 26543993 - 26544127
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatt 238  Q
    ||||||||| |||| ||||| |||   |||||||||||| |||||  || | | |||||||||||||||||||| | |||||| ||||||||||||| ||    
T  26543993 cagttaactaccgaggttttcctcagtagttaactgcagccggtttcttcagaattcggcagttaactgccgagaggtatttggataatttactcgtgtt 26544092  T
Q  239 tctcagctaaaccaaatatgtcagcatcaattctc 273  Q
    ||||||| |||| | || ||||| || ||||||||    
T  26544093 tctcagccaaacaacatgtgtcaacaacaattctc 26544127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 6232749 - 6232698
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  6232749 ggtgtatttccttatttaatttcaggtttgaaattcctcggcagttaactgc 6232698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 7189955 - 7190030
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    ||||||||| |||||||||| |||| ||||||||||||| ||| | | ||||| ||||||||||||||||||||||    
T  7189955 cagttaactaccgaagttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaggg 7190030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 3943196 - 3943270
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagg 213  Q
    ||||||||| |||| |||||||||| ||||||||||||| ||| | | ||||| |||||||||||||||||||||    
T  3943196 cagttaactaccgaggtttttctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgagg 3943270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 39489971 - 39490059
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttac 231  Q
    |||| |||||||||||||| |||| ||||||||||||| |||||   |||   ||| ||||||||||||||||||| |||||||||||||||    
T  39489971 agtttactgccgaagttttcctcggcagttaactgcagccggtttcataa---ttcagcagttaactgccgagggacatttgaataatttac 39490059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 245
Target Start/End: Original strand, 4286705 - 4286811
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggtt-ctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtat 237  Q
    |||||||||||||| |||||  |||  ||||||||||||  |||| ||||| |||| ||||||||||||| |||||| ||||||| ||||||||| || |    
T  4286705 cagttaactgccgaggttttcatcggaagttaactgcagctggtttctttagaatt-cggcagttaactgtcgaggggtatttgagtaatttactagtgt 4286803  T
Q  238 ttctcagc 245  Q
    ||||||||    
T  4286804 ttctcagc 4286811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 10424907 - 10424812
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| |||||||||| || ||  | | ||||| |||||||||||||||| |||||  |||||| ||||||||||||    
T  10424907 agtttactgccgaagttttcctcggcagttaactgtagccgtatttctaaaacttcggcagttaactgctgaggggcatttgagtaatttactcgt 10424812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 14002603 - 14002552
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    ||||||||||||||||||||||| |||||||||||| ||| |||||||||||    
T  14002603 ggtgtatttccttatttaatttctggtttgaaattcctcggcagttaactgc 14002552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 29947835 - 29947740
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||||||||||||||||| |||  | ||||||| ||| ||  | | ||||| ||||||||||||||||||||||  |||||| ||||||||||||    
T  29947835 agttaactgccgaagttttcctcagcggttaactccagccgtatttctaaaacttcggcagttaactgccgaggggcatttgagtaatttactcgt 29947740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 37322100 - 37322151
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    ||||||||||||||||||||||||| |||||||||| ||| |||||||||||    
T  37322100 ggtgtatttccttatttaatttcagatttgaaattcctcggcagttaactgc 37322151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 36652954 - 36652853
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgt 259  Q
    ||||| |||||||||||  ||||| | ||||| |||| |||||||||||||| ||| |||| | ||| |||||||| | ||||||| ||||||||| |||    
T  36652954 ctcgatagttaactgcatccggttttctaaaacttcgacagttaactgccgatggacatttaagtaaattactcgtgtgtctcagccaaaccaaatgtgt 36652855  T
Q  260 ca 261  Q
    ||    
T  36652854 ca 36652853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 43976900 - 43976847
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagg 213  Q
    |||| ||||||||| ||| ||||| |||||||||||||||||||||||||||||    
T  43976900 ctcggcagttaactacagccggttttttaaaatttcggcagttaactgccgagg 43976847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 274
Target Start/End: Complemental strand, 30802108 - 30801977
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    |||| |||||||||||||| |||| ||||||||||||| |||||   |||   ||||||||||||||||||||||  |||||  ||| ||||| || |||    
T  30802108 agtttactgccgaagttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaggggcatttgggtaaattactagtgttt 30802012  T
Q  240 ctcagctaaaccaaatatgtcagcatcaattctca 274  Q
    |||||| |||   ||| ||||| || |||||||||    
T  30802011 ctcagccaaaggtaatgtgtcaacagcaattctca 30801977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 40220681 - 40220573
Alignment:
Q  166 agttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcat 265  Q
    |||||||||||| || || ||| | | |||||||||||||||||||||  ||||||  ||||||||| || ||||||||| |||| | || ||||| ||     
T  40220681 agttaactgcagccgattttttcagaattcggcagttaactgccgaggagtatttgggtaatttactagtgtttctcagccaaacaacatgtgtcaacaa 40220582  T
Q  266 caattctca 274  Q
    |||||||||    
T  40220581 caattctca 40220573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 43870129 - 43870197
Alignment:
Q  143 taactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    ||||| |||||||||| |||| ||| ||||||||||||| | | ||||| |||||||||||||||||||    
T  43870129 taactaccgaagttttcctcggcagctaactgcagtcggatttctaaaacttcggcagttaactgccga 43870197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 30273114 - 30273189
Alignment:
Q  99 gtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactg 174  Q
    ||||||||||||||||||||| |||||| || ||| ||| || |||||| |||| ||||| |||| ||||||||||    
T  30273114 gtgtatttccttatttaattttaggttttaagttcctcggcaattaactaccgaggttttcctcggcagttaactg 30273189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 38779648 - 38779725
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatattt 220  Q
    |||| ||||| |||||||| ||||  |||||||||||| ||||||  |||   ||||||||||||||||||||||||||||    
T  38779648 agtttactgcagaagttttcctcgggagttaactgcagccggttccataa---ttcggcagttaactgccgagggatattt 38779725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 17424201 - 17424128
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttcttt-aaaatttcggcagttaactgccga 211  Q
    ||||||||| |||| ||||| |||| ||||||||||||| ||| | ||  ||||||||||||||||||||||||    
T  17424201 cagttaactaccgaggttttcctcggcagttaactgcagccggattttccaaaatttcggcagttaactgccga 17424128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 220
Target Start/End: Original strand, 43258737 - 43258818
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatattt 220  Q
    ||||||||| || |||||||  |||  |||||||||||| ||||| ||| ||| ||||||||||||||||||| ||| ||||    
T  43258737 cagttaactaccaaagttttcttcggtagttaactgcagccggttttttcaaacttcggcagttaactgccgaaggacattt 43258818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 3086057 - 3086009
Alignment:
Q  187 taaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||| ||||||||||||||||||||| | |||||| ||||||||||||    
T  3086057 taaaacttcggcagttaactgccgaggaacatttgagtaatttactcgt 3086009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 10825287 - 10825211
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggga 215  Q
    |||||||||||||| ||||| |||||||||||  ||||| ||| | | ||||| ||||| |||||||| ||||||||    
T  10825287 cagttaactgccgaggttttcctcgacagttaggtgcagccggatttctaaaacttcggtagttaactaccgaggga 10825211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 23346849 - 23346777
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    ||||||||| |||| ||||| || | ||||||||||||| ||| | | ||||| |||||||||||||||||||    
T  23346849 cagttaactaccgaggttttccttggcagttaactgcagccggatttataaaacttcggcagttaactgccga 23346777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 28477071 - 28477167
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||||||| |||| ||||| |||| ||||||||||||| ||  | | ||||| ||||||||||||||| ||||||  ||| || |||||| |||||    
T  28477071 cagttaactaccgaggttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgtcgaggggcattagagtaatttgctcgt 28477167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 29074055 - 29074103
Alignment:
Q  187 taaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||| ||||||||||||||||||||||  |||||| ||||||||||||    
T  29074055 taaaacttcggcagttaactgccgaggggcatttgagtaatttactcgt 29074103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 214
Target Start/End: Complemental strand, 2917756 - 2917677
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    ||||||||||||| | || ||||| |||| |||||||||| || ||||| || ||  | |||||||||||||||||||||    
T  2917756 tcgacagttaactactgaggttttcctcggcagttaactgtagccggtttttcaatttctcggcagttaactgccgaggg 2917677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 245
Target Start/End: Complemental strand, 2983469 - 2983362
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggga-tatttgaataatttactcgtat 237  Q
    |||||||||||||| ||||| ||||  |||||||||||| || |||   | || |||||||| ||||||||||||||  |||||| ||||||||  || |    
T  2983469 cagttaactgccgaggttttcctcggtagttaactgcagccgattccaaacaaattcggcagctaactgccgagggagcatttgagtaatttacatgtgt 2983370  T
Q  238 ttctcagc 245  Q
    ||||||||    
T  2983369 ttctcagc 2983362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 28420222 - 28420352
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    |||| |||||||||||||| |||| ||||||||||||| |||||   |||   ||||||||||||||| | ||||  |||||  ||| ||||| || |||    
T  28420222 agtttactgccgaagttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgtcaaggggcatttgggtaaattactagtgttt 28420318  T
Q  240 ctcagctaaaccaaatatgtcagcatcaattctc 273  Q
    |||||| |||   ||| ||||| |||||||||||    
T  28420319 ctcagccaaaggtaatgtgtcaacatcaattctc 28420352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 33416150 - 33416083
Alignment:
Q  187 taaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaa 254  Q
    ||||| ||||| ||||||||||||| || ||||||| ||| |||||||| ||| ||||| ||||||||    
T  33416150 taaaacttcggtagttaactgccgaagggtatttgagtaaattactcgtgtttttcagccaaaccaaa 33416083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 230
Target Start/End: Original strand, 41566165 - 41566260
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataattta 230  Q
    ||||||||||| |||||| ||||| ||||  |||||| ||||||||||||   |||| |||| ||||||||| | ||||| ||||||  |||||||    
T  41566165 tcgacagttaattgccgaggttttcctcggtagttaattgcagtcggttccaaaaaaattcgacagttaactactgaggggtatttgggtaattta 41566260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 24607593 - 24607647
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    |||| ||||||||||||| ||||| ||||||  |||||||||||||||| |||||    
T  24607593 ctcggcagttaactgcagccggttttttaaatcttcggcagttaactgctgaggg 24607647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 235
Target Start/End: Original strand, 29401603 - 29401705
Alignment:
Q  133 catcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttact 232  Q
    ||||| |||||||||||||| |   ||||||  |||||||||| | ||||| | ||||| |||| |||||||||||||||||  |||| | ||| |||||    
T  29401603 catcggcagttaactgccgaggaaattctcgggagttaactgccgccggttttctaaaacttcgacagttaactgccgaggggcatttaagtaaattact 29401702  T
Q  233 cgt 235  Q
    |||    
T  29401703 cgt 29401705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 38340857 - 38340934
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatattt 220  Q
    |||| |||||||||||||||||||  ||||||||| || ||||||  |||   ||||||||||||||| ||||||| ||||    
T  38340857 agtttactgccgaagtttttctcggtagttaactgtagccggttccataa---ttcggcagttaactgtcgagggacattt 38340934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 173
Target Start/End: Complemental strand, 39393110 - 39393072
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaact 173  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  39393110 tcgacagttaactaccgaggtttttctcgacagttaact 39393072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 45475508 - 45475434
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    |||||||| |||| ||||| |||| |||||||||| || ||||| || ||  | |||||||||||||||||||||    
T  45475508 agttaactaccgaggttttcctcggcagttaactgtagccggtttttgaatttctcggcagttaactgccgaggg 45475434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 250
Target Start/End: Original strand, 3803602 - 3803659
Alignment:
Q  194 tcggcagttaactgccga-gggatatttgaataatttactcgtatttctcagctaaac 250  Q
    |||||||||||||||||| ||||||||||  ||||||||| || ||||||||| ||||    
T  3803602 tcggcagttaactgccgatgggatatttgggtaatttacttgtgtttctcagccaaac 3803659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 10425824 - 10425897
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagg 213  Q
    |||| |||||||||||||| |||| ||||||||||||| ||  | | ||||| |||| ||||||||| ||||||    
T  10425824 agtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactaccgagg 10425897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 22003405 - 22003502
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcgg-ttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||||||| |||| ||||| |||| ||||||||||| | ||| ||| | |||| |||||||||| ||| |||| ||  |||||| ||||||||||||    
T  22003405 cagttaactaccgaggttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgt 22003502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 250
Target Start/End: Original strand, 43313417 - 43313474
Alignment:
Q  193 ttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaac 250  Q
    |||||||| |||||| |||| | ||||||| |||||||||||| ||||||||| ||||    
T  43313417 ttcggcagctaactgtcgagaggtatttgagtaatttactcgtgtttctcagccaaac 43313474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 261
Target Start/End: Complemental strand, 7779659 - 7779591
Alignment:
Q  193 ttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtca 261  Q
    ||||||||||||||||||| ||||||||  ||  |||||  || ||||||||| ||||||||| |||||    
T  7779659 ttcggcagttaactgccgaaggatattttcatcttttacatgtgtttctcagccaaaccaaatgtgtca 7779591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 23347332 - 23347404
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    |||||| || |||| ||||| ||||  |||||||||||| ||| | | ||||| |||||||||||||||||||    
T  23347332 cagttagctaccgaggttttcctcggtagttaactgcagccggatttctaaaacttcggcagttaactgccga 23347404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 29600828 - 29600757
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    |||| |||||||||||||| ||||  |||||||||||| ||||||  |||   ||||||||||||||| ||||||    
T  29600828 agtttactgccgaagttttcctcggtagttaactgcagccggttccataa---ttcggcagttaactgtcgaggg 29600757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 29601197 - 29601245
Alignment:
Q  187 taaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||| ||| ||||||||||||||| ||||||||| |||| ||||||||    
T  29601197 taaaacttcagcagttaactgccgaaggatatttggataaattactcgt 29601245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 41004597 - 41004553
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggtt 183  Q
    ||||||||| ||||||||||| ||| ||||||||||||| |||||    
T  41004597 cagttaactaccgaagtttttttcggcagttaactgcagccggtt 41004553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 3e-61; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 98 - 273
Target Start/End: Original strand, 18884467 - 18884642
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||| ||||| || ||||||||||    
T  18884467 ggtgtatttccttatttaattttaggtttgaaattcctcggcagttaactgccgaagtttttctcggcagttaactgcagccggtttttcaaaatttcgg 18884566  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctc 273  Q
    |||||||||||||||||  |||||| |||||||||||| ||||||||| ||||||||| ||||| |||||||||||    
T  18884567 cagttaactgccgaggggcatttgagtaatttactcgtgtttctcagccaaaccaaatgtgtcaacatcaattctc 18884642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 98 - 255
Target Start/End: Original strand, 48807349 - 48807506
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||     
T  48807349 ggtgtatttccttatttaatttaaggtttgaaattcatcagcagttaactgccgaagttttcctcagcagttaactgcagccggttctttaaaatttcga 48807448  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    |||||||||||||||||| |||||| |||||||||||| ||||||||| |||||||||    
T  48807449 cagttaactgccgagggacatttgagtaatttactcgtgtttctcagccaaaccaaat 48807506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 98 - 278
Target Start/End: Original strand, 43176591 - 43176771
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||| |||| |||||||||||||  ||||||||||||||||||    
T  43176591 ggtgtatttccttatttaatttcaggtttgaaattcctcggtagttaactgccgaagttttcctcggcagttaactgcagcaggttctttaaaatttcgg 43176690  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctcatctt 278  Q
    |||||||||| ||| || |||||   ||| |||||||| ||||||||| ||||||||| ||| | || |||| ||||||||    
T  43176691 cagttaactgtcgaagggtatttaggtaaattactcgtgtttctcagccaaaccaaatgtgtgaacaacaatactcatctt 43176771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 98 - 255
Target Start/End: Complemental strand, 48806595 - 48806438
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    ||||||||| |||||||||||||||||||||||||| ||| ||||||||||| ||| |||| |||| ||||||||||||| ||||||||||||||||||     
T  48806595 ggtgtattttcttatttaatttcaggtttgaaattcctcggcagttaactgctgaaattttcctcggcagttaactgcagccggttctttaaaatttcga 48806496  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    ||||||||||||||  | |||||| |||| |||||||| ||||||||| |||||||||    
T  48806495 cagttaactgccgaaaggtatttggataaattactcgtgtttctcagccaaaccaaat 48806438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 101 - 261
Target Start/End: Complemental strand, 11565973 - 11565813
Alignment:
Q  101 gtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcag 200  Q
    |||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||| |||||||||||||||||| |||||||||| ||||||||||     
T  11565973 gtattttcttatttaatttcaggtttaaaattcctcgacagttaactgtcgaagttttcctcgacagttaactgcagccggttctttagaatttcggcaa 11565874  T
Q  201 ttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtca 261  Q
    ||||| ||| |  || ||||||||||||||||||| ||||| ||| ||||||||| |||||    
T  11565873 ttaaccgccaaaagacatttgaataatttactcgtgtttctaagccaaaccaaatgtgtca 11565813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 98 - 261
Target Start/End: Original strand, 2449575 - 2449734
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||||||||||||||  |||    ||||||| |||||||||||||  || |||||||||| || |||||||||||||||     
T  2449575 ggtgtatttccttatttaatttcaggtttgaaatttctcg----ttaactgtcgaagtttttctcagcacttaactgcagccgattctttaaaatttcga 2449670  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtca 261  Q
    || ||||||||||||||| |||||| |||||||||||| ||| || |||||||||||| |||||    
T  2449671 caattaactgccgagggacatttgagtaatttactcgtgtttatcggctaaaccaaatgtgtca 2449734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 112 - 270
Target Start/End: Complemental strand, 20208606 - 20208448
Alignment:
Q  112 tttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    |||||||||| ||||||| ||||||  ||||||||| |||| ||||| |||| ||||||||||||| |||||||   ||| |||||||||||||||||||    
T  20208606 tttaatttcatgtttgaagttcatctgcagttaactaccgaggttttcctcggcagttaactgcagccggttctagtaaacttcggcagttaactgccga 20208507  T
Q  212 gggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaatt 270  Q
    |||| |||||| |||||||||||| ||||||||| ||||||||| ||||| || |||||    
T  20208506 gggacatttgagtaatttactcgtgtttctcagccaaaccaaatgtgtcaacaacaatt 20208448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 147 - 269
Target Start/End: Complemental strand, 27872440 - 27872318
Alignment:
Q  147 tgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagct 246  Q
    ||||||||||||  ||| |||||||| | || ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||     
T  27872440 tgccgaagttttcttcggcagttaacggaagccggttctttaaaatttcggcagttaactgccgatggatatttgagtaatttactcgtgtttctcagcc 27872341  T
Q  247 aaaccaaatatgtcagcatcaat 269  Q
    ||||||||||||||| |||||||    
T  27872340 aaaccaaatatgtcaacatcaat 27872318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 98 - 255
Target Start/End: Original strand, 37856707 - 37856864
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||||||||||||||  | | || |||||| | |||||||| |||| ||  ||||||||| |||||||||||||||||||    
T  37856707 ggtgtatttccttatttaatttcaggtttgaaatttcttggcaattaactactgaagttttcctcggcacctaactgcagccggttctttaaaatttcgg 37856806  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    |||||||||||| | ||||||||   ||| |||||||| ||||| ||| |||||||||    
T  37856807 cagttaactgccaaaggatatttaggtaaattactcgtgtttcttagccaaaccaaat 37856864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 160 - 275
Target Start/End: Complemental strand, 37855907 - 37855792
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgt 259  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||||||||| | |||||| | ||||||| |||| |||||||| ||||||| || |||    
T  37855907 ctcggcagttaactgcagccggttctttaaaatttcggaagttaactgccgatgaatatttaagtaatttattcgtgtttctcagttaaaccagatctgt 37855808  T
Q  260 cagcatcaattctcat 275  Q
    || || |||| |||||    
T  37855807 caacaacaatactcat 37855792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 112 - 270
Target Start/End: Original strand, 52469020 - 52469178
Alignment:
Q  112 tttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    |||||||||| ||||||| ||| ||| ||| ||||  | || |||||||||||||||||||||||| ||||||    ||| ||||  |||||||||  ||    
T  52469020 tttaatttcatgtttgaagttcttcggcagctaacgactgaggtttttctcgacagttaactgcagccggttcgagtaaacttcgatagttaactgttga 52469119  T
Q  212 gggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaatt 270  Q
    |||  |||||| |||||||||||| ||||||||| ||| ||||||||||| ||||||||    
T  52469120 ggggcatttgagtaatttactcgtgtttctcagccaaatcaaatatgtcaacatcaatt 52469178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 14200629 - 14200534
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| ||||||||||||| ||  | | ||||| |||| ||||||||||||||||||||||||| ||||||||||||    
T  14200629 agtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactgccgagggatatttgagtaatttactcgt 14200534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 40833615 - 40833710
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| ||||||||||||| ||  | | ||||| |||||||||||||||||||||| ||||||| ||||||||||||    
T  40833615 agtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgt 40833710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 140 - 232
Target Start/End: Original strand, 46254453 - 46254545
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttact 232  Q
    |||| |||||||||||||| |||| ||||||||||||| ||  | | ||||| |||||||||||||| ||||| |||||||||||||||||||    
T  46254453 agtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactaccgagagatatttgaataatttact 46254545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 131 - 235
Target Start/End: Original strand, 51037464 - 51037568
Alignment:
Q  131 ttcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataattta 230  Q
    |||||||  |||| |||||||||||||| |||| ||||||| ||||| ||  | | ||||| ||||||||||||||||||||||| |||||| |||||||    
T  51037464 ttcatcggtagtttactgccgaagttttcctcggcagttaattgcagccgtatttctaaaacttcggcagttaactgccgagggacatttgagtaattta 51037563  T
Q  231 ctcgt 235  Q
    |||||    
T  51037564 ctcgt 51037568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 245
Target Start/End: Complemental strand, 4783720 - 4783609
Alignment:
Q  134 atcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactc 233  Q
    |||| |||||||||||||||||||| |||| |||||||||||| ||||||  || | | ||||  |||||||||||||| | ||||||| ||| ||||||    
T  4783720 atcggcagttaactgccgaagttttcctcggcagttaactgcaatcggtttcttcagaattcgaaagttaactgccgagaggtatttgagtaaattactc 4783621  T
Q  234 gtatttctcagc 245  Q
    || |||||||||    
T  4783620 gtgtttctcagc 4783609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 100 - 158
Target Start/End: Original strand, 6092720 - 6092778
Alignment:
Q  100 tgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttt 158  Q
    |||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  6092720 tgtatttccttatttaatttcaagtttaaaattcttcgacagttaactgccgaagtttt 6092778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 254
Target Start/End: Original strand, 38369187 - 38369301
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    |||| |||| ||||||||| |||| ||||||||||||| ||  | | ||||| ||||||||||||||||||| || ||||||| ||||||||||||||      
T  38369187 agtttactgtcgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtatgg 38369286  T
Q  240 ctcagctaaaccaaa 254  Q
    | |||| ||||||||    
T  38369287 cacagccaaaccaaa 38369301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 50447076 - 50446979
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtat 237  Q
    |||| |||||||||||||| |||||||||||||||||| ||  | ||||||| ||||||||||||||||||| |   |||||| ||||||||| ||||    
T  50447076 agtttactgccgaagttttcctcgacagttaactgcagccgtatttttaaaacttcggcagttaactgccgaagagcatttgagtaatttacttgtat 50446979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 21022892 - 21022988
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||||||| |||| ||||| |||| ||||||||||||| ||  | | ||||| ||||||||||||||||||||||  |||||| ||||||||||||    
T  21022892 cagttaactaccgaggttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggcatttgagtaatttactcgt 21022988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 2449060 - 2449009
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  2449060 ggtgtatttccttatttaatttcaggtttgaaattcctcggcagttaactgc 2449009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 37855943 - 37855892
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  37855943 ggtgtatttccttatttaatttcaggtttgaaattcctcggcagttaactgc 37855892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 14201535 - 14201627
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| ||||||||||||| |||||   |||   ||||||||||||||||||||||  |||||| ||||||||||||    
T  14201535 agtttactgccgaagttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaggggcatttgagtaatttactcgt 14201627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 168 - 245
Target Start/End: Original strand, 37296218 - 37296295
Alignment:
Q  168 ttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagc 245  Q
    |||||||||| ||||||||| ||||||||||||||||||| ||| ||  |||||| |||||||||||| ||| |||||    
T  37296218 ttaactgcagccggttcttttaaatttcggcagttaactgtcgaagggcatttgagtaatttactcgtgtttatcagc 37296295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 114 - 230
Target Start/End: Original strand, 20209306 - 20209422
Alignment:
Q  114 taatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagg 213  Q
    |||||||| ||||||| ||  ||| ||||||||| |||||||||| |||  ||||||||||||| | ||||    ||| | ||||||||||||||| |||    
T  20209306 taatttcatgtttgaagtttctcggcagttaactaccgaagttttactcagcagttaactgcagccagttccaataaactccggcagttaactgccaagg 20209405  T
Q  214 gatatttgaataattta 230  Q
    ||||||||| |||||||    
T  20209406 gatatttgagtaattta 20209422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 40832711 - 40832619
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||  ||||||||||||| |||||  | | ||||| |||||||||||||||||||  |||||||||||||||||||    
T  40832711 agtttactgccgaagttttcctcagcagttaactgcagccggtt--tcataattt-ggcagttaactgccgaggggcatttgaataatttactcgt 40832619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 16983591 - 16983516
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    ||||||||| |||| |||||||||| |||||||||| || ||| | | ||||| ||||||||||||||||||||||    
T  16983591 cagttaactaccgaggtttttctcggcagttaactgtagccggatttctaaaacttcggcagttaactgccgaggg 16983516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 270
Target Start/End: Complemental strand, 18411207 - 18411136
Alignment:
Q  199 agttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaatt 270  Q
    |||| ||||||||| || ||||||||||||||||||| ||||||||| ||||||||| ||||| || |||||    
T  18411207 agtttactgccgagagacatttgaataatttactcgtgtttctcagccaaaccaaatgtgtcaacaacaatt 18411136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 23220746 - 23220651
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| ||||||||||||||  ||| ||||||||||||| ||  | | ||||| ||||||||||||||||| | || ||||||| ||||||||||||    
T  23220746 agtttactgccgaagttttcatcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccaaagggtatttgagtaatttactcgt 23220651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 37296174 - 37296225
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    |||||||||||||||||||||||||||||||||||| ||| || ||||||||    
T  37296174 ggtgtatttccttatttaatttcaggtttgaaattcctcggcaattaactgc 37296225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 274
Target Start/End: Complemental strand, 43175763 - 43175668
Alignment:
Q  179 cggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctca 274  Q
    |||||||||||||||||||||| |||||||| | ||  |||||| |||||||||| |  |||||||| ||||||||| ||||| || |||| ||||    
T  43175763 cggttctttaaaatttcggcagctaactgcctaagggcatttgagtaatttactcatgcttctcagccaaaccaaatgtgtcaacagcaatactca 43175668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 9655913 - 9655985
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    ||||| |||||||||||||| ||||  |||||||||||||||||||  |||   ||||||||||||||||||||||    
T  9655913 cagtttactgccgaagttttcctcggtagttaactgcagtcggttccataa---ttcggcagttaactgccgaggg 9655985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 275
Target Start/End: Original strand, 36480545 - 36480677
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    |||||||| |||||||||| ||||  |||||||||||| ||||||  |||   ||||||||||||||||||||| | ||||| |||| ||||| || |||    
T  36480545 agttaactaccgaagttttcctcggtagttaactgcagccggttccataa---ttcggcagttaactgccgaggaacatttggataaattacttgtgttt 36480641  T
Q  240 ctcagctaaaccaaatatgtcagcatcaattctcat 275  Q
     ||||| ||  || || ||||| || ||||||||||    
T  36480642 atcagccaatgcatatgtgtcaacaacaattctcat 36480677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 46253551 - 46253459
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| ||||||||||||| |||||   |||   ||||||||||||||||||| ||  |||||| ||||||||||||    
T  46253551 agttcactgccgaagttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgatgggcatttgagtaatttactcgt 46253459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 55793989 - 55793916
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttcttt-aaaatttcggcagttaactgccga 211  Q
    ||||||||| |||| ||||| |||| ||||||||||||| ||| | ||| ||||||||||||||||||||||||    
T  55793989 cagttaactcccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 55793916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 21018001 - 21018081
Alignment:
Q  132 tcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcgg-ttctttaaaatttcggcagttaactgccga 211  Q
    |||||| |||||||||||||| ||||| |||| ||||||| ||||| ||| || || |||||||| |||||||||||||||    
T  21018001 tcatcggcagttaactgccgaggttttcctcggcagttaattgcagccggatttttcaaaatttcagcagttaactgccga 21018081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 21343382 - 21343481
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    |||| ||| |||||||||| ||||  ||||||||| || |||||||   | |||||||||||||||||||||| ||||||||| |||  ||||||| |||    
T  21343382 agtttactaccgaagttttcctcggtagttaactgtagccggttct---acatttcggcagttaactgccgagagatatttgagtaaactactcgtgttt 21343478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 16984165 - 16984240
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    |||||||||  ||| ||||| |||| ||||||||||||| ||| | | ||||| ||||||||||||||||||||||    
T  16984165 cagttaactatcgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaggg 16984240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 187 - 258
Target Start/End: Complemental strand, 21015760 - 21015689
Alignment:
Q  187 taaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatg 258  Q
    ||||| |||| ||||||||||||||||| ||||||| ||||||||||||||  | || | ||||||||||||    
T  21015760 taaaacttcgacagttaactgccgaggggtatttgagtaatttactcgtatggcacaaccaaaccaaatatg 21015689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 28235566 - 28235637
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    |||||||||| |||||||| |||| ||||||||||| | |||||   ||||| |||||||||||||||||||    
T  28235566 agttaactgcagaagttttcctcggcagttaactgccgccggtttactaaaacttcggcagttaactgccga 28235637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 139 - 230
Target Start/End: Original strand, 32365945 - 32366036
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataattta 230  Q
    ||||||| ||| |||||||| ||||  |||||||||||||| ||||    ||| |||| |||||| ||||||||||| ||||||||||||||    
T  32365945 cagttaattgcggaagttttcctcggtagttaactgcagtcagttccaataaaattcgacagttagctgccgagggacatttgaataattta 32366036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 214
Target Start/End: Original strand, 39590564 - 39590647
Alignment:
Q  131 ttcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    ||||||| ||||||||| |||| ||||| |||| |||||||||||||  |  | | ||||| ||||||||||||||||||||||    
T  39590564 ttcatcggcagttaactaccgaggttttcctcggcagttaactgcagctgtatttctaaaacttcggcagttaactgccgaggg 39590647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 273
Target Start/End: Original strand, 40061192 - 40061299
Alignment:
Q  166 agttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcat 265  Q
    |||||||||||  ||||| | ||||| |||||| |||||||||||| ||  ||||   ||| |||||||| | ||||||| ||||||||||||||| ||     
T  40061192 agttaactgcaaccggttttctaaaacttcggcggttaactgccgatgggcatttaggtaaattactcgtgtgtctcagccaaaccaaatatgtcaacaa 40061291  T
Q  266 caattctc 273  Q
    ||||||||    
T  40061292 caattctc 40061299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 245
Target Start/End: Original strand, 28322130 - 28322227
Alignment:
Q  145 actgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcag 244  Q
    ||||||||||||||  |||  ||||||||||||  |||||  |||   |||||||||||||| |||||||| |||||| ||| |||||||| ||||||||    
T  28322130 actgccgaagttttcttcggtagttaactgcagctggttccataa---ttcggcagttaactaccgagggacatttgagtaaattactcgtgtttctcag 28322226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 32538329 - 32538398
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    ||||| ||||||||||||||| |||| |||||||||||| ||||||  |||   |||||||||||||||||||    
T  32538329 cagtttactgccgaagtttttttcgatagttaactgcagccggttccataa---ttcggcagttaactgccga 32538398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 23221675 - 23221767
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| ||| |||||||||| |||| ||||||||||||| |||||   |||   ||||||||||||||||||| ||  |||||||||| ||||||||    
T  23221675 agtttactaccgaagttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaagggcatttgaataaattactcgt 23221767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 275
Target Start/End: Complemental strand, 28157646 - 28157514
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    |||| |||||||||||||| ||||  |||||| || || ||||||  |||   |||||||||||| |||||||||  ||||| |||| |||||||| |||    
T  28157646 agtttactgccgaagttttcctcggtagttaattgtagccggttccataa---ttcggcagttaattgccgaggggcatttggataaattactcgtgttt 28157550  T
Q  240 ctcagctaaaccaaatatgtcagcatcaattctcat 275  Q
    |||||| ||  || || ||||| || ||||||||||    
T  28157549 ctcagccaatacatatgtgtcaacaacaattctcat 28157514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 38368296 - 38368204
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| ||| |||||||||| |||| ||||||||||||| |||||   |||   ||||||||||||||||||| ||| ||||| |||| ||||||||    
T  38368296 agtttactaccgaagttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaaggacatttggataaattactcgt 38368204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 3403861 - 3403805
Alignment:
Q  194 tcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaac 250  Q
    |||||||||||||||||| || ||||||  ||||||||| |||||||||||| ||||    
T  3403861 tcggcagttaactgccgaagggtatttgcgtaatttacttgtatttctcagccaaac 3403805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 28081511 - 28081455
Alignment:
Q  155 tttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    |||| |||| ||||||||||||||||| | | ||||| |||||||||||||||||||    
T  28081511 ttttcctcggcagttaactgcagtcggatttctaaaacttcggcagttaactgccga 28081455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 43175817 - 43175769
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaac 146  Q
    ||||||||| |||||||||||||||||||||||||  ||| ||||||||    
T  43175817 ggtgtattttcttatttaatttcaggtttgaaattactcggcagttaac 43175769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 12376053 - 12375983
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagg 213  Q
    |||| |||||||||||||| ||||  |||||||||||| ||||||  |||   |||||||||||||||||||||    
T  12376053 agtttactgccgaagttttcctcggtagttaactgcagccggttccataa---ttcggcagttaactgccgagg 12375983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 160 - 250
Target Start/End: Original strand, 28084015 - 28084103
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaac 250  Q
    |||| |||||||||||||  || | | ||||| ||||||||||| |||||||  ||||||||| ||||||||| || ||||||||| ||||    
T  28084015 ctcggcagttaactgcagctggatttctaaaacttcggcagttatctgccga--gatatttgagtaatttacttgtgtttctcagccaaac 28084103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 46169206 - 46169276
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagg 213  Q
    |||| |||||||||||||| |||| ||||||||||||| ||||||  |||   ||||||||||||||| |||||    
T  46169206 agtttactgccgaagttttcctcggcagttaactgcagccggttccataa---ttcggcagttaactgacgagg 46169276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 275
Target Start/End: Original strand, 8111481 - 8111555
Alignment:
Q  201 ttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctcat 275  Q
    ||||||||||| ||| ||||  |||| |||||||| | ||||||| ||||||||| ||||| || ||||||||||    
T  8111481 ttaactgccgatggacatttagataaattactcgtgtatctcagccaaaccaaatgtgtcaacaacaattctcat 8111555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 35631236 - 35631163
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    |||| |||| |||| ||||||||| |||| ||||||||||||| ||||||  |||   |||||||||||||||||||    
T  35631236 tcgatagtttactgtcgaagttttcctcggcagttaactgcagccggttccataa---ttcggcagttaactgccga 35631163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 15999803 - 15999915
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatt-tcggcagttaactgccga-gggatatttgaataatttactcgta 236  Q
    ||||||||| |||| ||||| |||| ||||||| ||||| ||| | || ||| || |||||||||||||||||| ||| ||||||  ||||||||| ||     
T  15999803 cagttaactaccgaggttttcctcggcagttaattgcagccggat-ttcaaatttctcggcagttaactgccgagggggtatttgggtaatttacttgtg 15999901  T
Q  237 tttctcagctaaac 250  Q
    ||||||||| ||||    
T  15999902 tttctcagccaaac 15999915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 26932653 - 26932556
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaat-ttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||||||| |||| ||||| |||| ||||||||| | | ||||| | |||||  |||||||||| ||| |||| ||| |||||| ||||||||||||    
T  26932653 cagttaactaccgaggttttcctcggcagttaactaccgccggttgtctaaaaacttcggcagtttactaccgaaggacatttgagtaatttactcgt 26932556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 33383874 - 33383822
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaat 192  Q
    ||||||||| |||| ||||| |||| ||||||||||||||||||| ||||||||    
T  33383874 cagttaacttccgaggttttcctcggcagttaactgcagtcggtt-tttaaaat 33383822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 26791718 - 26791674
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggtt 183  Q
    |||||||||||||| ||||||||||  |||||||||||| |||||    
T  26791718 cagttaactgccgaggtttttctcggtagttaactgcagccggtt 26791674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 2e-55; HSPs: 91)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 100 - 261
Target Start/End: Complemental strand, 13782343 - 13782182
Alignment:
Q  100 tgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggca 199  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| ||||    
T  13782343 tgtatttccttatttaatttcaggtttgaaattcctcggcagttaactgccgaagttttcctcggcagttaattgcagtcggttctttaaaattttggca 13782244  T
Q  200 gttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtca 261  Q
    |||||||||||||||| |||| | |||||||||||| ||||||||| ||| ||||| |||||    
T  13782243 gttaactgccgagggacatttaagtaatttactcgtgtttctcagccaaatcaaatgtgtca 13782182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 98 - 255
Target Start/End: Complemental strand, 40741016 - 40740859
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    ||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  40741016 ggtgtatttccttatttaatttcaggtttgaaaatcctcggcagttaactgccgaagttttcctcggcagttaactgcagccggttctttaaaatttcgg 40740917  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    |||||||||| ||| |||||||||  ||| |||||||| ||||||||| |||||||||    
T  40740916 cagttaactgtcgaaggatatttgggtaaattactcgtgtttctcagccaaaccaaat 40740859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 98 - 255
Target Start/End: Original strand, 34892772 - 34892929
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||     
T  34892772 ggtgtatttccttatttaatttcaggtttgaaattcctcggcagttaactgccgaagttttcctcggcagttaactgcagtcggttctttaaaatttcga 34892871  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
     ||| ||||||||| |||||||||| ||| |||||| | ||||||||| ||| |||||    
T  34892872 aagtcaactgccgaaggatatttgagtaaattactcatgtttctcagccaaatcaaat 34892929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 98 - 250
Target Start/End: Original strand, 13783071 - 13783223
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||     
T  13783071 ggtgtatttccttatttaatttcaggtttgaaattcttcgacagttaactgccgaagttttcctcggcagttaactgcagccggttctttaaaatttcga 13783170  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaac 250  Q
    ||||||||||||||  | ||||||| ||| |||  ||| ||||||||| ||||    
T  13783171 cagttaactgccgaatggtatttgagtaaattaaccgtgtttctcagccaaac 13783223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 98 - 245
Target Start/End: Original strand, 16940239 - 16940386
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||||||||||||||  |||||||||||||||||||    
T  16940239 ggtgtatttccttatttaatttcaggtttgaaattcctcggcagttaactgccgaaattttcctcgacagttaactgcaaccggttctttaaaatttcgg 16940338  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagc 245  Q
    || ||||||||| || || |||| | |||||||||||| |||||||||    
T  16940339 cacttaactgccaagagacatttaagtaatttactcgtgtttctcagc 16940386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 98 - 245
Target Start/End: Original strand, 7121749 - 7121896
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    ||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||     
T  7121749 ggtgtatttccttatttaagttcaggtttgaaattcctcggcagttaactgccgaagttttcctcagcagttaactgcagccggttctttaaaatttcga 7121848  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagc 245  Q
    ||||||||||||||| |  |||||| ||||||||| || ||| |||||    
T  7121849 cagttaactgccgagaggcatttgagtaatttacttgtgtttttcagc 7121896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 103 - 272
Target Start/End: Original strand, 43520744 - 43520913
Alignment:
Q  103 atttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagtt 202  Q
    |||| |||||||||||||| ||||||||||| |||  ||||||||||||||||||| |||  ||||||||||||| || |||||||||||||||||||||    
T  43520744 attttcttatttaatttcatgtttgaaattcctcggtagttaactgccgaagttttcctcagcagttaactgcagccgattctttaaaatttcggcagtt 43520843  T
Q  203 aactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattct 272  Q
    ||||||||| | | ||||||||||||||||||| |||||||   ||||||||| ||| | || |||||||    
T  43520844 aactgccgatgaacatttgaataatttactcgtgtttctcactcaaaccaaatgtgtgaacaacaattct 43520913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 98 - 250
Target Start/End: Original strand, 36595909 - 36596061
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    ||||||||| |||||||||||||||||||||||||| ||| |||||||||||  ||||||| |||| ||||||||||||| ||||||||||||||||||     
T  36595909 ggtgtattttcttatttaatttcaggtttgaaattcctcggcagttaactgcttaagttttcctcggcagttaactgcagccggttctttaaaatttcga 36596008  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaac 250  Q
    || |||||||||||   | |||| | |||||||| ||||||||||||| ||||    
T  36596009 caattaactgccgaaaaacatttaagtaatttacacgtatttctcagccaaac 36596061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 100 - 255
Target Start/End: Complemental strand, 16939488 - 16939333
Alignment:
Q  100 tgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggca 199  Q
    |||||||||||||||||||||||||||||||||| | | || |||||| | ||||| || |||| ||||||||||||| ||||||||||||||||| |||    
T  16939488 tgtatttccttatttaatttcaggtttgaaattctttgtcaattaactactgaagtcttcctcggcagttaactgcagccggttctttaaaatttcagca 16939389  T
Q  200 gttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    ||||||||||||  | ||||||  ||| |||||||| ||||||||| |||||||||    
T  16939388 gttaactgccgaaaggtatttgggtaaattactcgtgtttctcagcaaaaccaaat 16939333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 98 - 255
Target Start/End: Complemental strand, 29034159 - 29034002
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||  ||||||||||  ||| ||||||||||||| | |||| |||||||||||     
T  29034159 ggtgtatttccttatttaatttcaggtttgaaattcctcgatagttaaccaccgaagttttcatcggcagttaactgcagccagttcgttaaaatttcga 29034060  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    || ||||| |||||  | ||||||||||| |||||||| ||||| ||  |||||||||    
T  29034059 caattaaccgccgaaaggtatttgaataaattactcgtgtttcttagtcaaaccaaat 29034002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 98 - 255
Target Start/End: Original strand, 37656769 - 37656925
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||| ||||||||||| | | |||||||||||||||||||| || | ||||||||  ||| ||||||||||||| |||||    
T  37656769 ggtgtatttccttatttaatttcatgtttgaaattccttggcagttaactgccgaagttttcct-ggcagttaacaacagccggttctttaaaaattcgg 37656867  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    ||||||||||| || |||||||||| ||| |||||| | ||| | ||| |||||||||    
T  37656868 cagttaactgctgaaggatatttgagtaaattactcatgtttttaagccaaaccaaat 37656925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 98 - 261
Target Start/End: Complemental strand, 7121010 - 7120847
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggtt-ctttaaaatttcg 196  Q
    |||||||| ||||||||||||| ||||||||||||| ||   ||||||||||| |||||||||||| ||| ||||||||| ||||| |||||||||| |     
T  7121010 ggtgtattaccttatttaattttaggtttgaaattcttcagtagttaactgccaaagtttttctcggcagctaactgcagccggtttctttaaaatt-ca 7120912  T
Q  197 gcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtca 261  Q
    ||||||||||||||| ||||||||  |||| |||||||| ||||||||| |||| |||| |||||    
T  7120911 gcagttaactgccgaaggatatttagataaattactcgtgtttctcagccaaactaaatgtgtca 7120847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 98 - 230
Target Start/End: Original strand, 35206623 - 35206755
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||||||||| |  |||| |||||||||||||||||| ||| |||||||||||| |     
T  35206623 ggtgtatttccttatttaatttcaggtttaaaatttctcgacagttaactgccaagattttcctcgacagttaactgcagccggctctttaaaatttgga 35206722  T
Q  198 cagttaactgccgagggatatttgaataattta 230  Q
    |||||||||| |||   ||||||||||||||||    
T  35206723 cagttaactgtcgaaaaatatttgaataattta 35206755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 98 - 244
Target Start/End: Original strand, 3086394 - 3086540
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||| |||   ||  || |||||||||| ||||||||||||||||||     
T  3086394 ggtgtatttccttatttaatttcaagtttgaaattcctcggcagttaactgccgaaatttagatcagcaattaactgcagccggttctttaaaatttcga 3086493  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcag 244  Q
    ||||||||||||||  || |||| | ||||||| |||| ||||||||    
T  3086494 cagttaactgccgaatgacatttaagtaatttattcgtgtttctcag 3086540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 102 - 272
Target Start/End: Complemental strand, 41471198 - 41471029
Alignment:
Q  102 tatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagt 201  Q
    |||||||||||||||||| || ||| |||||  |||  ||||||||||| ||||||| ||||| |||||||||||| || ||||||||||||||| ||||    
T  41471198 tatttccttatttaattttagatttaaaatttctcggtagttaactgcc-aagttttcctcgaaagttaactgcagccgattctttaaaatttcgacagt 41471100  T
Q  202 taactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattct 272  Q
    |||||| ||| ||| |||||| |||||||||||| || ||| || ||| ||||| ||||| || |||||||    
T  41471099 taactgtcgaaggacatttgagtaatttactcgtgttactcggccaaatcaaatgtgtcaacaacaattct 41471029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 100 - 196
Target Start/End: Complemental strand, 39512421 - 39512325
Alignment:
Q  100 tgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcg 196  Q
    ||||||||||||||||||||||||||| |||||  || ||| |||||||||||| ||||||| |||||||||||||||||| |||||||||||||||    
T  39512421 tgtatttccttatttaatttcaggtttaaaatttctcaacaattaactgccgaaatttttctggacagttaactgcagtcgattctttaaaatttcg 39512325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 156 - 261
Target Start/End: Complemental strand, 34892062 - 34891957
Alignment:
Q  156 ttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    |||||||| ||||||||||||  |||||||||||||||| |  |||||||||||||||   |||||||||||||| |||| |||||||||||||||||||    
T  34892062 ttttctcggcagttaactgcaaccggttctttaaaattttgatagttaactgccgaggagcatttgaataatttattcgtgtttctcagctaaaccaaat 34891963  T
Q  256 atgtca 261  Q
     |||||    
T  34891962 gtgtca 34891957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 160 - 261
Target Start/End: Original strand, 39513212 - 39513313
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgt 259  Q
    |||||||||||| ||||| ||||||||||||||||||  ||||||||||||||||  |||||| |||||||||||| ||||||||  ||||||||| |||    
T  39513212 ctcgacagttaattgcagccggttctttaaaatttcgatagttaactgccgaggggcatttgagtaatttactcgtgtttctcagtcaaaccaaatgtgt 39513311  T
Q  260 ca 261  Q
    ||    
T  39513312 ca 39513313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 139 - 270
Target Start/End: Original strand, 39277465 - 39277596
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatt 238  Q
    ||||||||||| || ||||| ||||  | |||||||||| || ||||   ||| ||||||||||||||||||||||  ||||||||||||||||||| ||    
T  39277465 cagttaactgctgaggttttcctcggtaattaactgcagccgattctactaaacttcggcagttaactgccgaggggcatttgaataatttactcgtgtt 39277564  T
Q  239 tctcagctaaaccaaatatgtcagcatcaatt 270  Q
    ||||||| ||||||||| ||||| || |||||    
T  39277565 tctcagccaaaccaaatgtgtcaacaacaatt 39277596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 140 - 261
Target Start/End: Complemental strand, 28694146 - 28694025
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    ||||||||| ||| ||||| |||| ||||||||||||| ||||| |   ||| ||||||||||||||||||||||| |||||| |||||||||||| |||    
T  28694146 agttaactggcgaggttttcctcggcagttaactgcagccggttttactaaacttcggcagttaactgccgagggacatttgagtaatttactcgtgttt 28694047  T
Q  240 ctcagctaaaccaaatatgtca 261  Q
    |||| | |||| |||| |||||    
T  28694046 ctcaaccaaactaaatgtgtca 28694025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 100 - 255
Target Start/End: Complemental strand, 31745290 - 31745135
Alignment:
Q  100 tgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggca 199  Q
    |||||||| ||||||||||||| | ||||||||  ||| |  ||||||||||||||||| |||   ||||||||||||  | || | ||||| |||||||    
T  31745290 tgtatttctttatttaatttcaagcttgaaatttctcggcttttaactgccgaagttttcctcagtagttaactgcagctgtttttctaaaacttcggca 31745191  T
Q  200 gttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    ||||||| |||| || ||||||  ||| |||||||| ||||||||| |||||||||    
T  31745190 gttaactaccgaagggtatttgggtaaattactcgtgtttctcagccaaaccaaat 31745135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 98 - 196
Target Start/End: Complemental strand, 39207746 - 39207649
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcg 196  Q
    ||||||||||||||||||||||||| ||| |||||| ||| |||||||||| |||||||||  |||  |||||||||||| | ||||||||||||||||    
T  39207746 ggtgtatttccttatttaatttcagatttaaaattcctcggcagttaactgtcgaagttttcatcg-tagttaactgcagccagttctttaaaatttcg 39207649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 139 - 275
Target Start/End: Complemental strand, 41016483 - 41016347
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatt 238  Q
    ||||||||| |||| ||||| |||| |||||||||||||| || | | ||||| ||||| ||||||||| ||||||  |||||||| |||||||||| ||    
T  41016483 cagttaactaccgaggttttcctcggcagttaactgcagttggatttctaaaacttcggtagttaactgtcgaggggcatttgaatgatttactcgtgtt 41016384  T
Q  239 tctcagctaaaccaaatatgtcagcatcaattctcat 275  Q
    ||| ||| ||||  ||| ||||| || ||||||||||    
T  41016383 tcttagccaaactcaatgtgtcaacagcaattctcat 41016347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 3085589 - 3085514
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||| |||||| | |||||| ||||||||||||    
T  3085589 ctcggcagttaactgcagccggttctttaaaatttcggtagttaactaccgaggaacatttgagtaatttactcgt 3085514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 5533030 - 5533125
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| ||||||||||||| ||  | | ||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  5533030 agtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgctgaggggtatttgagtaatttactcgt 5533125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 255
Target Start/End: Original strand, 36345930 - 36346025
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    |||| ||||||||||||| |||| |||| ||||||||||||||||||| ||| | | |||||| |||||||||||| ||| ||||| |||||||||    
T  36345930 ctcggcagttaactgcagccggtgcttttaaatttcggcagttaactgtcgaagaacatttgagtaatttactcgtgtttatcagccaaaccaaat 36346025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 255
Target Start/End: Original strand, 38134137 - 38134232
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    |||| ||||||||||||| |||||||||||||||| | |||||||||||||| ||  |||||| ||||||||| || | ||||||| |||||||||    
T  38134137 ctcggcagttaactgcagccggttctttaaaattttgacagttaactgccgatgggcatttgagtaatttacttgtgtctctcagccaaaccaaat 38134232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 39583318 - 39583401
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctca 243  Q
    |||| ||||||||||||| || || ||| | | ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  39583318 ctcggcagttaactgcagccgatttttttagaattcggcagttaactgtcgatggatatttgaataatttactcgtatttctca 39583401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 255
Target Start/End: Original strand, 41472051 - 41472134
Alignment:
Q  172 ctgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    |||||||||||||||||||||||||||||||||||| ||| || ||||||  ||| |||||||| ||||||||| ||| |||||    
T  41472051 ctgcagtcggttctttaaaatttcggcagttaactgtcgaagggtatttgggtaaattactcgtgtttctcagccaaatcaaat 41472134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 274
Target Start/End: Complemental strand, 42731933 - 42731765
Alignment:
Q  100 tgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggca 199  Q
    |||||||| ||||| ||||| ||| ||||||||  ||| |||||||||||||||||||| |||| || |||||      || || | ||||| ||||  |    
T  42731933 tgtatttcattattgaatttaaggcttgaaatttctcggcagttaactgccgaagttttcctcggcaattaac------cgattttctaaaacttcgaaa 42731840  T
Q  200 gttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctca 274  Q
    ||||||||||||  ||||||||||||| ||||| || ||||||||| ||||||||| ||| | || |||||||||    
T  42731839 gttaactgccgaaagatatttgaataaattacttgtgtttctcagccaaaccaaatgtgtaaacaacaattctca 42731765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 232
Target Start/End: Original strand, 38604253 - 38604345
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttact 232  Q
    |||| |||||||||||||| |||| ||||||||||||| ||  | | ||||| ||||||||||||||| |||||| ||||||| |||||||||    
T  38604253 agtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgtcgaggggtatttgagtaatttact 38604345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 20861868 - 20861939
Alignment:
Q  100 tgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaa 171  Q
    |||||||||||||||||||||||| ||||||||  | | ||||||||||| |||||||| ||||||||||||    
T  20861868 tgtatttccttatttaatttcaggcttgaaatttcttggcagttaactgctgaagttttcctcgacagttaa 20861939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 27501668 - 27501573
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| ||||||||||||| ||  | | ||||| ||||| |||||||||||||| | ||||||| ||||||||||||    
T  27501668 agtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccgagaggtatttgagtaatttactcgt 27501573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 28617636 - 28617541
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||| ||||||||| |||| ||||||||||||| ||  | | ||||| ||||||||||||||||||| || ||||||| ||||||||||||    
T  28617636 agtttactgtcgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgt 28617541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 32584120 - 32584025
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| ||||||||||||| ||  | | ||||| |||| ||||||||| ||||||| ||||||| ||||||||||||    
T  32584120 agtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactaccgaggggtatttgagtaatttactcgt 32584025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 36345894 - 36345945
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  36345894 ggtgtatttccttatttaatttcaggtttgaaattcctcggcagttaactgc 36345945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 39513176 - 39513223
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaa 145  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||    
T  39513176 ggtgtatttccttatttaatttcaggtttgaaattcctcgacagttaa 39513223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 273
Target Start/End: Complemental strand, 39831198 - 39831091
Alignment:
Q  166 agttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcat 265  Q
    |||||||||||| ||||| | |||||||||||||||||||| |||||||  ||||   ||| |||||||| | ||||||| ||||||||| ||||| ||     
T  39831198 agttaactgcagccggttttctaaaatttcggcagttaactaccgaggggcatttaggtaaattactcgtgtgtctcagccaaaccaaatgtgtcaacaa 39831099  T
Q  266 caattctc 273  Q
    ||||||||    
T  39831098 caattctc 39831091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 44933927 - 44933832
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| ||||| |||||||| |||| ||||||||||||| ||  | | ||||| ||||||||||||||||||||||  |||||| ||||||||||||    
T  44933927 agtttactgcggaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggcatttgagtaatttactcgt 44933832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 38134102 - 38134152
Alignment:
Q  99 gtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  38134102 gtgtatttccttatttaatttcaggtttgaaattcctcggcagttaactgc 38134152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 277
Target Start/End: Original strand, 43363260 - 43363402
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcg 234  Q
    |||| |||| |||||||||||||| ||||  |||||||||||| ||  | | ||||| |||||||||||| ||||||| | ||||||| |||||||||||    
T  43363260 tcgatagtttactgccgaagttttcctcggtagttaactgcagccgtatttctaaaacttcggcagttaagtgccgagaggtatttgagtaatttactcg 43363359  T
Q  235 tatttctcagctaaaccaaatatgtcagcatcaattctcatct 277  Q
    | |  | |||| ||||||||  ||  | |||||||||||||||    
T  43363360 tgtggcacagccaaaccaaaagtgggaacatcaattctcatct 43363402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 140 - 249
Target Start/End: Complemental strand, 12206792 - 12206683
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    ||||||||||||| ||||| |||||| ||||||||||  ||||| |   ||| ||||||||||||||||| | ||| |||||| ||||||| |||| |||    
T  12206792 agttaactgccgaggttttcctcgacggttaactgcacccggttttactaaacttcggcagttaactgccaatggacatttgagtaatttaatcgtgttt 12206693  T
Q  240 ctcagctaaa 249  Q
    |||| |||||    
T  12206692 ctcaactaaa 12206683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 140 - 249
Target Start/End: Complemental strand, 12451220 - 12451111
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    ||||||||||||| ||||| |||||| ||||||||||  ||||| |   ||| ||||||||||||||||| | ||| |||||| ||||||| |||| |||    
T  12451220 agttaactgccgaggttttcctcgacggttaactgcacccggttttactaaacttcggcagttaactgccaatggacatttgagtaatttaatcgtgttt 12451121  T
Q  240 ctcagctaaa 249  Q
    |||| |||||    
T  12451120 ctcaactaaa 12451111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 38603378 - 38603286
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||| ||||||| ||||||||||||||||||||||||   |||   ||||||||||||||||||||| | |||| | ||||||||||||    
T  38603378 agtttactgccaaagttttcctcgacagttaactgcagtcggtttcataa---ttcggcagttaactgccgaggaacatttaagtaatttactcgt 38603286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 41471999 - 41472051
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgcc 150  Q
    |||||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  41471999 ggtgtatttccttatttaatttaaggtttgaaattcctcggcagttaactgcc 41472051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 140 - 232
Target Start/End: Original strand, 44841879 - 44841971
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttact 232  Q
    |||| |||| |||||||||||||| ||||||||||||  ||  | | ||||| |||||||||||||||| ||||| ||||||| |||||||||    
T  44841879 agtttactgacgaagtttttctcggcagttaactgcaaccgtatttctaaaacttcggcagttaactgctgaggggtatttgactaatttact 44841971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 2335153 - 2335248
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| ||| |||||||||| |||| ||||||||||||| ||  | | ||||| ||||| ||||||||||||||||  |||||| ||||||||||||    
T  2335153 agtttactaccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccgaggggcatttgagtaatttactcgt 2335248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 245
Target Start/End: Complemental strand, 3695435 - 3695333
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    |||| ||| |||||||||| ||||  |||||||||||| ||||||  |||   ||||||||||||||||||||||  ||||| |||| |||||||| |||    
T  3695435 agtttactaccgaagttttcctcggtagttaactgcagccggttccataa---ttcggcagttaactgccgaggggcatttggataaattactcgtgttt 3695339  T
Q  240 ctcagc 245  Q
    ||||||    
T  3695338 ctcagc 3695333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 18441445 - 18441520
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    |||||||||||||| |||||||||| ||||||||| || |||||| || ||  | |||||||||||||||||||||    
T  18441445 cagttaactgccgaggtttttctcggcagttaactacaatcggttattgaatttctcggcagttaactgccgaggg 18441520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 22961467 - 22961518
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    ||||||||||||||| |||||||||||||||||||| ||| |||||||||||    
T  22961467 ggtgtatttccttatgtaatttcaggtttgaaattcctcggcagttaactgc 22961518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 22961503 - 22961578
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| ||||||||||||| ||||||||||||||||||||||| |||||| || ||| |||| | ||||||| ||||    
T  22961503 ctcggcagttaactgcaggcggttctttaaaatttcggcagtaaactgcagaaggacatttaagtaatttaatcgt 22961578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 276
Target Start/End: Complemental strand, 44885766 - 44885648
Alignment:
Q  157 tttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaata 256  Q
    ||||||| ||||||||||||  || || | ||||| |||  ||||||||||||||  ||||||| ||||| |||||||| ||||| ||| |||||||||     
T  44885766 tttctcggcagttaactgcaaccgattttctaaaacttcaacagttaactgccgaaagatatttaaataaattactcgtgtttct-agccaaaccaaatg 44885668  T
Q  257 tgtcagcatcaattctcatc 276  Q
    ||| | ||||||||||||||    
T  44885667 tgtaaacatcaattctcatc 44885648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 3641755 - 3641677
Alignment:
Q  99 gtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcag 177  Q
    ||||||||||||||||||||||| |||| || ||||||| ||||||| | |||| ||||| |||  |||||||||||||    
T  3641755 gtgtatttccttatttaatttcaagttttaagttcatcggcagttaattcccgaggttttcctcagcagttaactgcag 3641677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 37655985 - 37655931
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    |||| |||||||||| || ||||||||||||||||||| ||||||||||||||||    
T  37655985 ctcggcagttaactggagccggttctttaaaatttcggaagttaactgccgaggg 37655931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 37656021 - 37655971
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactg 148  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||||    
T  37656021 ggtgtatttccttatttaatttcaagtttgaaattcctcggcagttaactg 37655971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 27502573 - 27502665
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| ||||||||||||| |||||   |||   |||| |||||||||||||||||  |||||| ||||||||||||    
T  27502573 agtttactgccgaagttttcctcggcagttaactgcagccggtttcataa---ttcgacagttaactgccgaggggcatttgagtaatttactcgt 27502665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 22550869 - 22550941
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    ||||||||| |||| ||||| |||| ||||||||||||| ||| | | ||||| |||||||||||||||||||    
T  22550869 cagttaactaccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccga 22550941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 164 - 270
Target Start/End: Complemental strand, 23508638 - 23508535
Alignment:
Q  164 acagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagc 263  Q
    |||||||||||||| ||||||  |||   |||||||||||||||||||||| |||||  ||| |||||  ||||| |||||| ||||||||||| ||| |    
T  23508638 acagttaactgcagccggttccataa---ttcggcagttaactgccgaggggtattttcatattttacatgtattcctcagccaaaccaaatatatcaac 23508542  T
Q  264 atcaatt 270  Q
    | |||||    
T  23508541 aacaatt 23508535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 3085625 - 3085574
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    |||||||||||||||||||||||| | ||||||||| ||| |||||||||||    
T  3085625 ggtgtatttccttatttaatttcaaggttgaaattcctcggcagttaactgc 3085574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 245
Target Start/End: Complemental strand, 20854659 - 20854580
Alignment:
Q  166 agttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagc 245  Q
    |||||||||| | ||||| | ||||| ||||||||||||||||||||||| || |  |||| |||||||| |||||||||    
T  20854659 agttaactgccgccggttttctaaaacttcggcagttaactgccgagggacatgtagataaattactcgtgtttctcagc 20854580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 214
Target Start/End: Complemental strand, 34366988 - 34366905
Alignment:
Q  131 ttcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    ||||||| ||||||||| |||| ||||| ||||  |||||||||||| ||| | | ||||| ||||||||||||||| ||||||    
T  34366988 ttcatcggcagttaactaccgaggttttcctcggaagttaactgcagccggatttataaaacttcggcagttaactgacgaggg 34366905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 35205924 - 35205873
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    |||||||||||||||||||||| | ||||||||||| ||| |||||||||||    
T  35205924 ggtgtatttccttatttaattttaagtttgaaattcctcggcagttaactgc 35205873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 234
Target Start/End: Complemental strand, 39582533 - 39582498
Alignment:
Q  199 agttaactgccgagggatatttgaataatttactcg 234  Q
    ||||||||||||||||||||||||||||||||||||    
T  39582533 agttaactgccgagggatatttgaataatttactcg 39582498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 40745289 - 40745387
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    |||| ||| |||||||||| || |  ||||||||||||  |||||| |||   ||||||||||||||||||||||| ||||| |||| |||||||| |||    
T  40745289 agtttactaccgaagttttccttggtagttaactgcagctggttctataa---ttcggcagttaactgccgagggacatttggataaattactcgtgttt 40745385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 201 - 274
Target Start/End: Original strand, 6269046 - 6269118
Alignment:
Q  201 ttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctca 274  Q
    ||||||||||||| |||||||||||| |||||||| ||||||||| ||  || || |||||||| |||||||||    
T  6269046 ttaactgccgaggaatatttgaataaattactcgtgtttctcagc-aatgcatatgtgtcagcaacaattctca 6269118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 12207263 - 12207344
Alignment:
Q  193 ttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctca 274  Q
    ||||||||||||||||||| ||  |||||| ||||||| |||| ||||||||| |||  |||| ||||| ||||||| ||||    
T  12207263 ttcggcagttaactgccgatgggcatttgagtaatttattcgtgtttctcagccaaattaaatgtgtcaacatcaatactca 12207344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 12451691 - 12451772
Alignment:
Q  193 ttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctca 274  Q
    ||||||||||||||||||| ||  |||||| ||||||| |||| ||||||||| |||  |||| ||||| ||||||| ||||    
T  12451691 ttcggcagttaactgccgatgggcatttgagtaatttattcgtgtttctcagccaaattaaatgtgtcaacatcaatactca 12451772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 39208388 - 39208461
Alignment:
Q  182 ttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    ||||||||||||| |||||||||||  ||| ||| |||||| |||||||||||| ||| ||||| | |||||||    
T  39208388 ttctttaaaattttggcagttaactatcgaaggacatttgagtaatttactcgtgtttttcagcaataccaaat 39208461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 39601773 - 39601700
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgag 212  Q
    ||||||||| |||| ||||| |||| ||||||||||||| ||| | | ||||| ||||||||||||||| ||||    
T  39601773 cagttaactcccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgtcgag 39601700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 44886805 - 44886873
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    |||| |||||||||||||||||||| |||||||||||| || |||  |||   |||||||||||||||||||    
T  44886805 agtttactgccgaagtttttctcgatagttaactgcagccgattccataa---ttcggcagttaactgccga 44886873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 32585011 - 32585090
Alignment:
Q  153 agtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||||| |||| ||||||||||||| |||||   |||   |||||||||||||| |||||||| |||||| ||||||||||||    
T  32585011 agttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactaccgagggacatttgagtaatttactcgt 32585090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 43519970 - 43519899
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    |||| |||||||||||||| ||||| |||||||||||| ||||||  |||   ||||||||||||||| ||||||    
T  43519970 agtttactgccgaagttttcctcgatagttaactgcagccggttccataa---ttcggcagttaactgtcgaggg 43519899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 6013894 - 6013835
Alignment:
Q  217 atttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctcatc 276  Q
    |||||| ||||||||||||  |||||||| ||||||||| ||||| |||||||| |||||    
T  6013894 atttgagtaatttactcgtgattctcagccaaaccaaatgtgtcaacatcaattttcatc 6013835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 245
Target Start/End: Complemental strand, 36345071 - 36344969
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    |||| |||||||||||||| |||   |||||||||||| ||||||  |||   ||||||||||||||||||||||  |||||  ||| ||||| || |||    
T  36345071 agtttactgccgaagttttcctcagtagttaactgcagccggttccataa---ttcggcagttaactgccgaggggcatttgggtaaattactagtgttt 36344975  T
Q  240 ctcagc 245  Q
    ||||||    
T  36344974 ctcagc 36344969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 175
Target Start/End: Complemental strand, 39582559 - 39582524
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgc 175  Q
    ||||||||||||||||||||||||| ||||||||||    
T  39582559 agttaactgccgaagtttttctcgatagttaactgc 39582524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 274
Target Start/End: Complemental strand, 36127440 - 36127306
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    ||||||||| |||  |||| |||  ||||||||| ||| ||||| | ||||| |||| ||||||||||||||| ||  |||   ||| |||||||| | |    
T  36127440 agttaactgtcgagattttcctcagcagttaacttcagccggttttctaaaacttcgtcagttaactgccgagagacgtttaggtaaattactcgtgtgt 36127341  T
Q  240 ctcagctaaaccaaatatgtcagcatcaattctca 274  Q
    |||||| ||||||||| || || ||||||| ||||    
T  36127340 ctcagccaaaccaaatgtgccaacatcaatactca 36127306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 37651807 - 37651749
Alignment:
Q  217 atttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctcat 275  Q
    |||||| |||||||||||| ||||||||| ||||||||| ||||| || |||| |||||    
T  37651807 atttgagtaatttactcgtgtttctcagccaaaccaaatgtgtcaacaacaatactcat 37651749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 15030953 - 15030856
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcgg-ttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||||||| |||| ||||| |||| ||||||||||| | ||| ||| | |||| |||||||||| ||| |||| ||  |||||| ||||||||||||    
T  15030953 cagttaactcccgaggttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgt 15030856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 28645442 - 28645405
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgca 176  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  28645442 cagttaacggccgaagtttttctcgacaattaactgca 28645405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 28646252 - 28646289
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcag 177  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  28646252 agttaactgccgaagttttcctcggcagttaactgcag 28646289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 28650026 - 28649989
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgca 176  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  28650026 cagttaacggccgaagtttttctcgacaattaactgca 28649989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 28650836 - 28650873
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcag 177  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  28650836 agttaactgccgaagttttcctcggcagttaactgcag 28650873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 31185504 - 31185545
Alignment:
Q  194 tcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||||| |||||||||||||| ||||||| ||||||||||||    
T  31185504 tcggcaattaactgccgaggggtatttgagtaatttactcgt 31185545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 278
Target Start/End: Complemental strand, 41858540 - 41858455
Alignment:
Q  193 ttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctcatctt 278  Q
    ||||||||||||||| ||||||  ||||| |||| |||||||| ||||||||| ||   | || ||||| || |||||||||||||    
T  41858540 ttcggcagttaactgtcgaggggcatttggataaattactcgtgtttctcagccaatgtatatgtgtcaacaacaattctcatctt 41858455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 220
Target Start/End: Original strand, 44727505 - 44727589
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatattt 220  Q
    |||| |||||||| |||||||||| ||||  |||||||||||| | ||| ||| ||| |||||||||||| |||||| ||| ||||    
T  44727505 tcgaaagttaactaccgaagttttcctcggtagttaactgcag-ccgttttttcaaacttcggcagttaattgccgaaggacattt 44727589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 44885797 - 44885748
Alignment:
Q  100 tgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    ||||||| |||||||||||||||| ||||||||  ||| |||||||||||    
T  44885797 tgtattttcttatttaatttcaggcttgaaatttctcggcagttaactgc 44885748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 273
Target Start/End: Original strand, 20859662 - 20859742
Alignment:
Q  193 ttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctc 273  Q
    ||||||||||||||| ||||||| ||||   ||| || ||||| | ||||||| ||||||||| ||||| || ||||||||    
T  20859662 ttcggcagttaactgtcgagggacatttaggtaaattcctcgtgtgtctcagccaaaccaaatgtgtcaacaacaattctc 20859742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 274
Target Start/End: Complemental strand, 21248240 - 21248110
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    |||| |||||||||||||| ||||| | |||||||||| ||||||  |||   |||| ||||||||||||||  | ||||||  ||| ||||||||||||    
T  21248240 agtttactgccgaagttttcctcgataattaactgcagccggttccataa---ttcgccagttaactgccgaaaggtatttg-gtaaattactcgtattt 21248145  T
Q  240 ctcagctaaaccaaatatgtcagcatcaattctca 274  Q
     ||| ||||  || || |||||  |||||||||||    
T  21248144 ttcaactaatgcatatgtgtcaatatcaattctca 21248110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 23512780 - 23512839
Alignment:
Q  151 gaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagg 213  Q
    |||||||||||||  |||||||| ||| ||||||| |||   |||||||||||||||||||||    
T  23512780 gaagtttttctcggtagttaactacagccggttctataa---ttcggcagttaactgccgagg 23512839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 277
Target Start/End: Original strand, 37328862 - 37328946
Alignment:
Q  193 ttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctcatct 277  Q
    ||||||||||||||||||| | | |||| ||||  ||||| || | ||||||| ||||||||| ||||| ||  |||||||||||    
T  37328862 ttcggcagttaactgccgaagaacatttaaatatcttacttgtgtgtctcagccaaaccaaatgtgtcaacaataattctcatct 37328946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 42602529 - 42602457
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    ||||||||| |||| ||||| |||| ||||||||||||  ||||| || ||   |||||||||||||||||||    
T  42602529 cagttaactaccgaggttttcctcggcagttaactgcatccggtttttgaattcttcggcagttaactgccga 42602457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 2e-55; HSPs: 91)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 98 - 254
Target Start/End: Original strand, 45076212 - 45076369
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagttttt-ctcgacagttaactgcagtcggttctttaaaatttcg 196  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||||||||| ||| ||||||||||||||||||    
T  45076212 ggtgtatttccttatttaatttcaggtttgaaattcctcggcagttaactgccgaagttttttctcggcagttaactacagccggttctttaaaatttcg 45076311  T
Q  197 gcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaa 254  Q
    ||||||||||||||| |||||||||  ||| |||||||||||||||||| ||||||||    
T  45076312 gcagttaactgccgaaggatatttgggtaaattactcgtatttctcagccaaaccaaa 45076369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 98 - 261
Target Start/End: Complemental strand, 32592327 - 32592164
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||||||||||||||| ||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||||||||||||     
T  32592327 ggtgtatttccttatttaatttcaggtttgaaattcctcggcagctaactgtcgaagttttcctcggcagttaactgcagtcagttctttaaaatttcga 32592228  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtca 261  Q
    ||| |||||||||||||| |||||| |||||||||||| ||||||||| ||||||||| |||||    
T  32592227 cagctaactgccgagggacatttgagtaatttactcgtgtttctcagccaaaccaaatgtgtca 32592164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 98 - 255
Target Start/End: Complemental strand, 7941220 - 7941063
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||  ||||||||||||| |||||||||||||||||||    
T  7941220 ggtgtatttccttatttaatttcaggtttgaaattcctcggcagttaactgccgaagttttcctcagcagttaactgcagccggttctttaaaatttcgg 7941121  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    |||||||||||||| || |||||   ||| |||||||| ||||||||| |||||||||    
T  7941120 cagttaactgccgaagggtatttaggtaaattactcgtgtttctcagccaaaccaaat 7941063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 98 - 252
Target Start/End: Original strand, 32593075 - 32593229
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||  ||||||||| ||||  |||||||||||| ||||||||||||||||||     
T  32593075 ggtgtatttccttatttaatttcaggtttgaaattcctcggcagttaactatcgaagttttcctcggaagttaactgcagccggttctttaaaatttcga 32593174  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaacca 252  Q
    ||||||||||||||  |||||||| |||| |||||| | ||||||||||||||||    
T  32593175 cagttaactgccgaaagatatttggataaattactcctgtttctcagctaaacca 32593229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 98 - 255
Target Start/End: Complemental strand, 10658933 - 10658776
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    ||||||||||||||||||||||||| |||||||||| ||| |||||||||||| ||||||| |||| |||||| |||||| ||||||||| |||||||||    
T  10658933 ggtgtatttccttatttaatttcagatttgaaattcctcggcagttaactgccaaagttttcctcggcagttagctgcagccggttcttttaaatttcgg 10658834  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    |||||||| ||||| ||| ||||| ||||||||||| | ||||||||| |||||||||    
T  10658833 cagttaacagccgaaggacatttgcataatttactcatgtttctcagccaaaccaaat 10658776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 98 - 254
Target Start/End: Complemental strand, 6143781 - 6143625
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||||||| |||| ||||||||||||| ||||||||| ||||||| |    
T  6143781 ggtgtagttccttatttaatttcaggtttaaaattcctcggcagttaactgccgaagttttcctcggcagttaactgcagccggttcttttaaatttcag 6143682  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaa 254  Q
    || ||||||||||| ||| |||||| |||||||||||| |||||| || ||||||||    
T  6143681 caattaactgccgaaggacatttgagtaatttactcgtttttctcggccaaaccaaa 6143625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 98 - 245
Target Start/End: Original strand, 11270247 - 11270394
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||| ||||||||||||  ||| |||||||||||||||||||| || | ||||||||||||| ||||||||| |||||||||    
T  11270247 ggtgtatttccttatttaattttaggtttgaaatttctcggcagttaactgccgaagttttccttggcagttaactgcagccggttcttttaaatttcgg 11270346  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagc 245  Q
    |||||||||| |||  || ||||||||||||||||||| |||||||||    
T  11270347 cagttaactgtcgaaagacatttgaataatttactcgtgtttctcagc 11270394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 98 - 269
Target Start/End: Original strand, 20485494 - 20485670
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtc-----ggttctttaaaat 192  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||| |||| ||||||||||||| |     |||||||||||||    
T  20485494 ggtgtatttccttatttaatttcaggtttgaaattcctcggcagttaattgccgaagttttcctcggcagttaactgcagcccagccggttctttaaaat 20485593  T
Q  193 ttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaat 269  Q
    || |||||||||||||||| || ||||||  ||| |||||||| ||||||||| |||| |||| ||| | |||||||    
T  20485594 tttggcagttaactgccgaagggtatttgggtaaattactcgtgtttctcagccaaactaaatgtgtgaacatcaat 20485670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 98 - 229
Target Start/End: Complemental strand, 45075456 - 45075325
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||| |||| ||||||||| ||| || ||||||||||||||||    
T  45075456 ggtgtatttccttatttaatttcaggtttgaaattcctcggcagttaactgccaaagttttcctcggcagttaactccagccgattctttaaaatttcgg 45075357  T
Q  198 cagttaactgccgagggatatttgaataattt 229  Q
    ||||||||| ||||||   |||||||||||||    
T  45075356 cagttaactaccgaggagcatttgaataattt 45075325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 103 - 273
Target Start/End: Complemental strand, 19842608 - 19842439
Alignment:
Q  103 atttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagtt 202  Q
    ||||||||||||||||||| |||||||||||  || |||||||||| ||||||||| |||  ||||||||||||| || |||||||||||||||||||||    
T  19842608 atttccttatttaatttcatgtttgaaattcc-cggcagttaactgtcgaagttttcctcagcagttaactgcagccgattctttaaaatttcggcagtt 19842510  T
Q  203 aactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctc 273  Q
    ||||||||| ||  |||||||||||||||| || ||||||||  ||||||||| ||| | || ||||||||    
T  19842509 aactgccgaagggcatttgaataatttacttgtgtttctcagacaaaccaaatgtgtgaacagcaattctc 19842439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 100 - 275
Target Start/End: Original strand, 14043863 - 14044038
Alignment:
Q  100 tgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggca 199  Q
    |||||||||||||||||||||||| ||||||||  ||| |||||||||||||||||||| |||| ||||||||||||| || || | ||||| |||| ||    
T  14043863 tgtatttccttatttaatttcaggcttgaaatttctcggcagttaactgccgaagttttcctcggcagttaactgcagccgattttctaaaacttcgaca 14043962  T
Q  200 gttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctcat 275  Q
    |||||||||||| || ||||||  ||| |||||||| ||||||||| |||| |||| ||| | || ||||||||||    
T  14043963 gttaactgccgaagggtatttgggtaaattactcgtgtttctcagccaaactaaatgtgtaaacaacaattctcat 14044038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 2062477 - 2062339
Alignment:
Q  117 tttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggat 216  Q
    ||||||| ||||||||  ||| |||||||||||||||||||| |||||||||||||||||| | ||| | ||||| ||||||||||||||||||| || |    
T  2062477 tttcaggcttgaaatttctcggcagttaactgccgaagttttcctcgacagttaactgcagccagttttctaaaacttcggcagttaactgccgaagggt 2062378  T
Q  217 atttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    ||||| |||| |||||||||||||||||| |||||||||    
T  2062377 atttggataaattactcgtatttctcagccaaaccaaat 2062339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 98 - 233
Target Start/End: Original strand, 7941969 - 7942103
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    ||||||||| |||||||||||||||||||||||||| ||| || |||||||||||| |||| |||| ||||||||| ||  |  ||||||||||||||||    
T  7941969 ggtgtattttcttatttaatttcaggtttgaaattcctcggcatttaactgccgaaattttgctcggcagttaactaca-accattctttaaaatttcgg 7942067  T
Q  198 cagttaactgccgagggatatttgaataatttactc 233  Q
    ||||||||||||||||  ||||||| ||||||||||    
T  7942068 cagttaactgccgaggagtatttgagtaatttactc 7942103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 98 - 245
Target Start/End: Original strand, 4274913 - 4275060
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||||||||||||||  ||| ||||||||| |||||||||| || | ||||||| ||| | ||||||||||||||||| |    
T  4274913 ggtgtatttccttatttaatttcaggtttgaaatttttcggcagttaactaccgaagttttccttggcagttaaatgccgccggttctttaaaatttcag 4275012  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagc 245  Q
    |||||||| || ||||   |||||| ||||||||  || |||||||||    
T  4275013 cagttaacagcagaggagcatttgagtaatttacatgtgtttctcagc 4275060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 98 - 273
Target Start/End: Original strand, 26494466 - 26494634
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||| ||||||| ||||| || |||||||||| ||| |||||||||||||||||||| |||| |       ||||| |||||||||||||||| ||    
T  26494466 ggtgtattaccttattcaattttagatttgaaattcctcgccagttaactgccgaagttttcctcggc-------tgcagccggttctttaaaattttgg 26494558  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctc 273  Q
    |||||||||| ||| | | |||||| |||||||||||| ||||||||| ||||||||| | ||| || ||||||||    
T  26494559 cagttaactgtcgatgaacatttgagtaatttactcgtgtttctcagccaaaccaaatgtatcaacaacaattctc 26494634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 32743255 - 32743154
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgt 259  Q
    |||| |||||||||||||  |||||||||||||||||||| ||||||||||| ||| |||||| |||||||| ||| ||||||||| |||||||||||||    
T  32743255 ctcggcagttaactgcagctggttctttaaaatttcggcaattaactgccgatggacatttgagtaatttacccgtgtttctcagccaaaccaaatatgt 32743156  T
Q  260 ca 261  Q
    ||    
T  32743155 ca 32743154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 98 - 183
Target Start/End: Original strand, 51755813 - 51755898
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggtt 183  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||  ||||||||| ||| |||||    
T  51755813 ggtgtatttccttatttaatttcaggtttgaaattcttcggcagttaactgccgaagttttcctctgcagttaacttcagccggtt 51755898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 139 - 273
Target Start/End: Original strand, 1294081 - 1294215
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatt 238  Q
    |||||||||||||| ||||| ||||  ||||||||||||||||||  || | | |||||||||||||||||||||| ||||||  |||||||||||| ||    
T  1294081 cagttaactgccgaggttttcctcggaagttaactgcagtcggtttcttcagaattcggcagttaactgccgaggggtatttgggtaatttactcgtgtt 1294180  T
Q  239 tctcagctaaaccaaatatgtcagcatcaattctc 273  Q
    ||||||  |||| | || ||||| || ||||||||    
T  1294181 tctcagtcaaacaacatgtgtcaacaacaattctc 1294215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 160 - 274
Target Start/End: Complemental strand, 50330660 - 50330546
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgt 259  Q
    |||| ||||||||||||| || ||||||||||||||| || |||||||||||| |  |||||| |||||||||||| ||| ||||| ||||||||| |||    
T  50330660 ctcggcagttaactgcagccgattctttaaaatttcgacaattaactgccgagaggcatttgagtaatttactcgtgtttatcagccaaaccaaatgtgt 50330561  T
Q  260 cagcatcaattctca 274  Q
     | || |||||||||    
T  50330560 gaacaacaattctca 50330546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 140 - 233
Target Start/End: Original strand, 34543141 - 34543234
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactc 233  Q
    |||| |||||||||||||| |||| ||||||||||||| ||  | | ||||| ||||||||||||||||||||||| |||||| ||||||||||    
T  34543141 agtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgagggacatttgagtaatttactc 34543234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 12897892 - 12897797
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| ||||||||||||| ||  | | ||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  12897892 agtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgctgaggggtatttgagtaatttactcgt 12897797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 19988527 - 19988432
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| ||||||||||||||||||| |||| |||||||| ||  | | ||||| ||||||||||||||||||||||  |||||| ||||||||||||    
T  19988527 agtttactgccgaagtttttctcggcagtcaactgcagccgtatttctaaaacttcggcagttaactgccgaggggcatttgagtaatttactcgt 19988432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 27739572 - 27739667
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| ||||||||||||| ||  | | ||||| ||||||||||||||||||| || ||||||| ||||||||||||    
T  27739572 agtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgt 27739667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 28817006 - 28817101
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| ||||||||||||| ||  | | ||||| || ||||||||||||||||||| ||||||| ||||||||||||    
T  28817006 agtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaactttggcagttaactgccgaggggtatttgagtaatttactcgt 28817101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 153
Target Start/End: Original strand, 30294835 - 30294890
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaa 153  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  30294835 ggtgcatttccttatttaatttcaggtttgaaattcatcggcagttaactgccgaa 30294890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 51755688 - 51755609
Alignment:
Q  190 aatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaat 269  Q
    ||||| ||||||||||||| |||||  |||||| |||||||||||||||||||||| ||||||||| |||||||| ||||    
T  51755688 aattttggcagttaactgctgaggggcatttgagtaatttactcgtatttctcagccaaaccaaatgtgtcagcagcaat 51755609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 245
Target Start/End: Complemental strand, 52514356 - 52514254
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    |||| |||||||||||||| ||||| |||||||||||| ||||||  |||   |||||||||||| ||||||||| ||||||| ||| |||||||| |||    
T  52514356 agtttactgccgaagttttcctcgatagttaactgcagccggttccataa---ttcggcagttaattgccgaggggtatttgagtaaattactcgtgttt 52514260  T
Q  240 ctcagc 245  Q
    ||||||    
T  52514259 ctcagc 52514254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 166 - 244
Target Start/End: Complemental strand, 4274128 - 4274050
Alignment:
Q  166 agttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcag 244  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||||  |||||||||||||||  || ||||||||    
T  4274128 agttaactgcagctggttctttaaattttcggcagttaactgccgaggggcatttgaataatttacatgtgtttctcag 4274050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 139 - 245
Target Start/End: Complemental strand, 34645631 - 34645525
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatt 238  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||| |  | ||  |||||||||||||||||| ||||||||   ||| |||||||| ||    
T  34645631 cagttaactgccgaggttttcctcgagagttaactgcagtcggttttgaagaaactcggcagttaactgccgaaggatatttaggtaaattactcgtgtt 34645532  T
Q  239 tctcagc 245  Q
    |||||||    
T  34645531 tctcagc 34645525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 98 - 187
Target Start/End: Original strand, 31890205 - 31890294
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttcttt 187  Q
    |||||| |||||||||||||||||||||| || ||||||| |||||||||||||||||||| |||   |  ||||||||| |||||||||    
T  31890205 ggtgtacttccttatttaatttcaggttttaagttcatcggcagttaactgccgaagttttcctctgtaactaactgcagccggttcttt 31890294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 100 - 175
Target Start/End: Original strand, 6525283 - 6525358
Alignment:
Q  100 tgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgc 175  Q
    |||||||| |||||||| ||||||||| || ||| |||||||||||||||| ||||||||||||| ||||| ||||    
T  6525283 tgtatttcattatttaagttcaggttttaagttcttcgacagttaactgccaaagtttttctcgatagttagctgc 6525358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 32743291 - 32743240
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  32743291 ggtgtatttccttatttaatttcaggtttgaaattcctcggcagttaactgc 32743240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 135 - 214
Target Start/End: Complemental strand, 55385210 - 55385131
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    ||||||||||||| |||| ||||| |||| ||||||||||||| ||| | | ||||| ||||||||||||||||||||||    
T  55385210 tcgacagttaactaccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaggg 55385131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 11095092 - 11095184
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| |||||||||||||||||||   |||   |||||||| |||||||||||||  |||||| ||||||||||||    
T  11095092 agtttactgccgaagttttcctcggcagttaactgcagtcggtttcataa---ttcggcagctaactgccgaggggcatttgagtaatttactcgt 11095184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 26245400 - 26245308
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| ||| |||||||||||||||  |||||||||||| |||||   |||   |||||||||||||||||||||| ||||||| ||||||||||||    
T  26245400 agtttactaccgaagtttttctcggaagttaactgcagccggtttcataa---ttcggcagttaactgccgaggggtatttgagtaatttactcgt 26245308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 39999578 - 39999659
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttct 241  Q
    |||| ||||||||  ||| || |||||||||||||||||||||||||  ||||| |||||| | ||||||||||||||||||    
T  39999578 ctcggcagttaaccacagccgattctttaaaatttcggcagttaactatcgaggaatatttaagtaatttactcgtatttct 39999659  T

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Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 4008327 - 4008399
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    ||||||||| |||| |||||||||||||||||||||| | |||||   |||||||||||||||| ||||||||    
T  4008327 cagttaactcccgaggtttttctcgacagttaactgccgccggtttactaaaatttcggcagtttactgccga 4008399  T

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Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 255
Target Start/End: Complemental strand, 4330835 - 4330745
Alignment:
Q  163 gacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||||||||   |||||| |||||||| ||| |||| |||| |||||||||    
T  4330835 gacagttaactg-agtcggttttttaaaatt-cggcagttaactgccgaggagcatttgagtaatttacccgtgtttcccagccaaaccaaat 4330745  T

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Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 9582616 - 9582548
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactg 207  Q
    |||||||||| |||||||||||||| ||||||||||||||||||| || ||  | ||||||||||||||    
T  9582616 cagttaactgacgaagtttttctcggcagttaactgcagtcggtttttgaatttctcggcagttaactg 9582548  T

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Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 20484742 - 20484682
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttt 158  Q
    ||||||||||||||||||||||| | ||| ||||| |||| ||||||||||||||||||||    
T  20484742 ggtgtatttccttatttaatttctgatttaaaattaatcggcagttaactgccgaagtttt 20484682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 135 - 235
Target Start/End: Original strand, 50998680 - 50998780
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcg 234  Q
    |||||||||| || |||  |||||  ||| ||||||||||||| ||| | | ||||| ||||||||||||||||||||||  |||||| |||||||||||    
T  50998680 tcgacagttagctaccgcggttttcttcggcagttaactgcagccggatttataaaacttcggcagttaactgccgaggggcatttgagtaatttactcg 50998779  T
Q  235 t 235  Q
    |    
T  50998780 t 50998780  T

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Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 273
Target Start/End: Complemental strand, 11248622 - 11248492
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    |||| |||||||||||||| |||| ||||||||||||| |||||   |||   |||| ||||||||||||||||   |||||||||||||||||||||      
T  11248622 agtttactgccgaagttttcctcggcagttaactgcagccggtttcataa---ttcgacagttaactgccgaggagcatttgaataatttactcgtatgg 11248526  T
Q  240 ctcagctaaaccaaatatgtcagcatcaattctc 273  Q
    |  ||| ||||||||| ||  | |||||||||||    
T  11248525 catagccaaaccaaatgtgggaacatcaattctc 11248492  T

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Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 11249529 - 11249624
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| ||||||||||||| |   | | ||||| ||| ||||||||||||||| || ||||||| ||||||||||||    
T  11249529 agtttactgccgaagttttcctcggcagttaactgcagccatatttctaaaacttcagcagttaactgccgaagggtatttgagtaatttactcgt 11249624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 273
Target Start/End: Complemental strand, 17561801 - 17561694
Alignment:
Q  166 agttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcat 265  Q
    |||||||||||| ||||| | ||||||||||||||||||||| | ||||| ||||   ||| |||||||| | ||||||| ||| ||||| ||||| ||     
T  17561801 agttaactgcagccggttttctaaaatttcggcagttaactgtcaagggacatttaggtaaattactcgtgtgtctcagccaaatcaaatgtgtcaacaa 17561702  T
Q  266 caattctc 273  Q
    ||||||||    
T  17561701 caattctc 17561694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 43478834 - 43478909
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    ||||||||| |||||||||| |||| ||||||||||||| ||| | | ||||| ||| ||||||||||||||||||    
T  43478834 cagttaactaccgaagttttcctcggcagttaactgcagccggatttctaaaacttcagcagttaactgccgaggg 43478909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 48246481 - 48246406
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    ||||||||| |||| ||||| |||||||||||||||||| ||| | | ||||| ||| ||||||||||||||||||    
T  48246481 cagttaactaccgaggttttcctcgacagttaactgcagccggatttctaaaacttcagcagttaactgccgaggg 48246406  T

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Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 52570570 - 52570645
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    ||||||||| |||| ||||||||||  |||||||||||||||||| || ||   ||||||||||||||||||||||    
T  52570570 cagttaactaccgaggtttttctcggtagttaactgcagtcggtttttgaattcttcggcagttaactgccgaggg 52570645  T

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Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 220
Target Start/End: Original strand, 4331815 - 4331905
Alignment:
Q  130 attcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatattt 220  Q
    |||| |||| |||| |||||||||||||| |||  ||||||||||| | |||||   ||||| ||||||||||||||||||| ||||||||    
T  4331815 attcctcgatagtttactgccgaagttttcctcagcagttaactgccgccggtttactaaaacttcggcagttaactgccgaaggatattt 4331905  T

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Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 99 - 149
Target Start/End: Complemental strand, 34722334 - 34722284
Alignment:
Q  99 gtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    |||||||||||||||||||||||||||| || ||| |||||||||||||||    
T  34722334 gtgtatttccttatttaatttcaggttttaagttcttcgacagttaactgc 34722284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 232
Target Start/End: Complemental strand, 2645524 - 2645431
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggtt-ctttaaaatttcggcagttaactgccgagggatatttgaataatttact 232  Q
    ||||||||||||| ||||| |||| | ||||||||| | ||||| | | |||| ||||||||||||||||||||||| |||||  |||||||||    
T  2645524 agttaactgccgaggttttcctcggctgttaactgccgccggtttcctaaaaacttcggcagttaactgccgagggacatttgtgtaatttact 2645431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 2647703 - 2647776
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttcttt-aaaatttcggcagttaactgccga 211  Q
    ||||||||| |||| ||||| |||| ||||||||||||| ||| | ||| ||||||||||||||||||||||||    
T  2647703 cagttaactaccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 2647776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 3493658 - 3493561
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggtt-ctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||||||| |||| |||||||||  ||||||||||| | ||||| ||| |||| ||||||||||||||| ||||| | |||| | ||||||||||||    
T  3493658 cagttaactcccgaggtttttctctgcagttaactgccgccggtttcttaaaaacttcggcagttaactgtcgaggaacatttaagtaatttactcgt 3493561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 3497352 - 3497255
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggtt-ctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||||||| |||| |||||||||  ||||||||||| | ||||| ||| |||| ||||||||||||||| ||||| | |||| | ||||||||||||    
T  3497352 cagttaactcccgaggtttttctctgcagttaactgccgccggtttcttaaaaacttcggcagttaactgtcgaggaacatttaagtaatttactcgt 3497255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 233
Target Start/End: Complemental strand, 10492095 - 10492002
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactc 233  Q
    |||| |||||||||||||| |||| ||||||||||||| ||  | | ||||| |||| ||||||||| |||| ||| |||||| ||||||||||    
T  10492095 agtttactgccgaagttttcctcgtcagttaactgcagccgtatttctaaaacttcgacagttaactaccgatggacatttgagtaatttactc 10492002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 139 - 250
Target Start/End: Complemental strand, 2743467 - 2743355
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatt--tcggcagttaactgccga-gggatatttgaataatttactcgt 235  Q
    ||||||||| |||| ||||| |||| ||||||||||||| ||| |  || |||||  |||||||||||||||||| ||||||||||  ||||||||| ||    
T  2743467 cagttaactcccgaggttttcctcggcagttaactgcagccggat--ttcaaattcctcggcagttaactgccgaggggatatttgggtaatttacttgt 2743370  T
Q  236 atttctcagctaaac 250  Q
     ||||||||| ||||    
T  2743369 gtttctcagccaaac 2743355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 232
Target Start/End: Complemental strand, 11094179 - 11094088
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttact 232  Q
    |||| |||||||||||||| |||| ||||||||||||| ||  | | ||||| |||||||| ||||| |||| |||||||||| |||||||||    
T  11094179 agtttactgccgaagttttcctcggcagttaactgcag-cgtatttctaaaacttcggcagataactaccgaaggatatttgagtaatttact 11094088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 244
Target Start/End: Original strand, 24703412 - 24703524
Alignment:
Q  132 tcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttac 231  Q
    |||||| ||||||||| | || | ||| |||| ||||||||||||  ||  | | ||||| ||||| ||||||||||||||||  |||||| ||||||||    
T  24703412 tcatcggcagttaactcctgaggatttcctcggcagttaactgcatccgaatttctaaaacttcggtagttaactgccgaggggcatttgagtaatttac 24703511  T
Q  232 tcgtatttctcag 244  Q
    |||| ||||||||    
T  24703512 tcgtgtttctcag 24703524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 7247860 - 7247939
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    ||||||||||||| |||| ||||| |||| ||||||||||||| ||||| || ||    |||||||||||||||||||||    
T  7247860 tcgacagttaactaccgaggttttcctcgtcagttaactgcagccggttattgaattcctcggcagttaactgccgaggg 7247939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 19750090 - 19750028
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttga 222  Q
    |||| ||||||||||||| ||  | | |||||||||||||||||||||||||||| |||||||    
T  19750090 ctcggcagttaactgcagccgtatttctaaaatttcggcagttaactgccgaggggtatttga 19750028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 41803067 - 41802994
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaat-ttcggcagttaactgccgag 212  Q
    ||||||||| |||| ||||| |||| ||||||||||||| ||||| |||||| | ||||||||||||||||||||    
T  41803067 cagttaactaccgaggttttcctcggcagttaactgcagccggtt-tttaaattcttcggcagttaactgccgag 41802994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 50330691 - 50330645
Alignment:
Q  103 atttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    ||||||||||||||||||| ||||||||||| ||| |||||||||||    
T  50330691 atttccttatttaatttcatgtttgaaattcctcggcagttaactgc 50330645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 220
Target Start/End: Complemental strand, 8475895 - 8475814
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatattt 220  Q
    ||||||||| |||| ||||| |||| ||||||||||| | |||||   ||||| ||||||||||||||||||| ||| ||||    
T  8475895 cagttaactaccgaggttttcctcggcagttaactgccgccggtttactaaaacttcggcagttaactgccgaaggacattt 8475814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 16484460 - 16484533
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgag 212  Q
    ||||||||| |||||||||| |||| ||||||||||||| ||| |   |||||||||| ||| |||||||||||    
T  16484460 cagttaactcccgaagttttcctcggcagttaactgcagccggattactaaaatttcgacaggtaactgccgag 16484533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 245
Target Start/End: Original strand, 10492877 - 10492980
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatt 238  Q
    |||||||||||||||||||| |||| ||||||| ||||| |||||   |||   ||||||||||||||| ||||||  |||||  ||| ||||| || ||    
T  10492877 cagttaactgccgaagttttcctcggcagttaattgcagccggtttcataa---ttcggcagttaactgtcgaggggcatttgggtaaattactagtgtt 10492973  T
Q  239 tctcagc 245  Q
    |||||||    
T  10492974 tctcagc 10492980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 14042988 - 14042944
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttc 184  Q
    |||| |||||||||||||| ||||| |||||||||||||||||||    
T  14042988 agtttactgccgaagttttcctcgatagttaactgcagtcggttc 14042944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 42148350 - 42148283
Alignment:
Q  150 cgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatattt 220  Q
    ||||||||| ||||| |||||||||||| ||||||  |||   ||||||||||||||||||||| ||||||    
T  42148350 cgaagttttcctcgatagttaactgcagccggttccataa---ttcggcagttaactgccgaggaatattt 42148283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 42166414 - 42166486
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    ||||||||| |||||||||| |||| ||||| ||||| | |||||   ||||| |||||||||||||||||||    
T  42166414 cagttaactaccgaagttttcctcggcagtttactgccgccggtttactaaaacttcggcagttaactgccga 42166486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 43476261 - 43476185
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcgg-ttctttaaaatttcggcagttaactgccgaggg 214  Q
    ||||||||| |||| ||||| |||| ||||||||||||| ||| || | ||||| |||||||||||||| |||||||    
T  43476261 cagttaactaccgaggttttcctcggcagttaactgcagccggattttctaaaacttcggcagttaacttccgaggg 43476185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 600548 - 600623
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    ||||||||| |||| ||||| |||||||||||||||| | ||| | |  |||| ||||||||||||||| ||||||    
T  600548 cagttaactaccgaggttttcctcgacagttaactgcggccggatttccaaaacttcggcagttaactgtcgaggg 600623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 28611104 - 28611179
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    ||||||||| |||  ||||| |||| ||||||||||||| ||||| || ||  | |||||||||||||||||||||    
T  28611104 cagttaactaccgttgttttcctcggcagttaactgcagccggtttttgaatttctcggcagttaactgccgaggg 28611179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 245
Target Start/End: Original strand, 32744157 - 32744259
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    |||| |||||||||||||| ||||  |||||||||||| ||||||  |||   |||||||||||||| |||||||  |||||  ||| ||||| || |||    
T  32744157 agtttactgccgaagttttcctcggtagttaactgcagccggttccataa---ttcggcagttaactaccgaggggcatttgggtaaattactagtgttt 32744253  T
Q  240 ctcagc 245  Q
    ||||||    
T  32744254 ctcagc 32744259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 40798313 - 40798235
Alignment:
Q  145 actgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataa 226  Q
    |||||||||||||| |||||||||||||||||| || |||  |||   |||| |||||||||||||| | | ||||||||||    
T  40798313 actgccgaagttttcctcgacagttaactgcagccgattccataa---ttcgacagttaactgccgatgaacatttgaataa 40798235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 40798976 - 40799046
Alignment:
Q  147 tgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatattt 220  Q
    |||||||||||| ||||  |||||||||||| ||||||  |||   |||||||||||||||||||||| |||||    
T  40798976 tgccgaagttttcctcggtagttaactgcagccggttccataa---ttcggcagttaactgccgaggggtattt 40799046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 6144303 - 6144380
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatattt 220  Q
    ||||||||||||||||||| ||||  |||||||||||| ||||||  |||   |||||||||||| || ||||||| ||||    
T  6144303 agttaactgccgaagttttcctcggtagttaactgcagccggttccataa---ttcggcagttaattgtcgagggacattt 6144380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 272
Target Start/End: Complemental strand, 16861171 - 16861065
Alignment:
Q  166 agttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcat 265  Q
    |||||||||||  ||||| | ||||| |||| |||||||||| ||||||  ||||   ||| |||||||| | ||||||| ||||||||| ||||| ||     
T  16861171 agttaactgcatccggttttctaaaacttcgacagttaactgtcgaggggcatttaggtaaattactcgtgtgtctcagccaaaccaaatgtgtcaacag 16861072  T
Q  266 caattct 272  Q
    |||||||    
T  16861071 caattct 16861065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 261
Target Start/End: Original strand, 17568012 - 17568086
Alignment:
Q  187 taaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtca 261  Q
    |||||||||| |||||||||||||||||| ||||  |||| |||| ||| | ||||||| ||||| ||| |||||    
T  17568012 taaaatttcgacagttaactgccgagggacatttagataaattacccgtgtgtctcagccaaacctaatgtgtca 17568086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 19440325 - 19440251
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagg 213  Q
    ||||||||| |||| ||||| |||| ||||||||||||| |||||  | ||   |||||||||||||||||||||    
T  19440325 cagttaactaccgaggttttcctcggcagttaactgcagccggtttatgaattcttcggcagttaactgccgagg 19440251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 21343499 - 21343576
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatattt 220  Q
    ||||||||||||||||||| ||||  |||||||||||| ||||||  |||   ||||||||||||||| ||| ||| ||||    
T  21343499 agttaactgccgaagttttcctcggtagttaactgcagccggttccataa---ttcggcagttaactgtcgaaggacattt 21343576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 254
Target Start/End: Original strand, 30294899 - 30294973
Alignment:
Q  180 ggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaa 254  Q
    |||| ||||||||| || | ||||||||||||   |||||| ||||| |||||||| ||||||||| ||||||||    
T  30294899 ggttttttaaaattccgacggttaactgccgaaaaatatttaaataaattactcgtgtttctcagccaaaccaaa 30294973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 50122456 - 50122383
Alignment:
Q  131 ttcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactg 207  Q
    ||||||| ||||||||| |||||||||   ||| ||||||||||||| ||||||||   |||||||| |||||||||    
T  50122456 ttcatcggcagttaactcccgaagtttccttcggcagttaactgcagccggttctt---aatttcggtagttaactg 50122383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 250
Target Start/End: Complemental strand, 13743348 - 13743251
Alignment:
Q  153 agtttttctcgacagttaactgcagtcggttctttaaaatt--tcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaac 250  Q
    |||||| |||| ||||||||||||| ||| |  || |||||  ||||||||||||||||||||| ||||||  ||||||||  || ||||||||| ||||    
T  13743348 agttttcctcggcagttaactgcagccggat--ttcaaattcctcggcagttaactgccgaggggtatttgggtaatttacatgtgtttctcagccaaac 13743251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 19750075 - 19750112
Alignment:
Q  197 gcagttaactgccgagggatatttgaataatttactcg 234  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  19750075 gcagttaactgccgaggggtatttgagtaatttactcg 19750112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 40877804 - 40877876
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggga 215  Q
    |||| |||||||||||||| ||||| ||||||||| ||||||||   |||   ||||||||||||| |||||||||    
T  40877804 agtttactgccgaagttttcctcgaaagttaactgtagtcggtttcataa---ttcggcagttaaccgccgaggga 40877876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 52567832 - 52567759
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgag 212  Q
    ||||||||| || |||||||||||| ||||||| ||||| || || || ||   ||||||||||||||||||||    
T  52567832 cagttaactacctaagtttttctcggcagttaagtgcagccgatttttgaattattcggcagttaactgccgag 52567759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 55176352 - 55176389
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgca 176  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  55176352 cagttaactgccgaagttttcctcgatagttaactgca 55176389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 4002793 - 4002713
Alignment:
Q  155 tttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||| ||||||||||||| ||| | | ||||| ||||||| |||| |||||||||  ||||||  |||||||||||    
T  4002793 ttttcctcggcagttaactgcagccggatttctaaaacttcggcaattaaatgccgaggggcatttgagcaatttactcgt 4002713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 4015133 - 4015205
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    ||||||||| |||| ||||| |||| ||||||||| | | |||||   ||||| |||||||||||||||||||    
T  4015133 cagttaacttccgaggttttcctcggcagttaactcccgccggtttactaaaacttcggcagttaactgccga 4015205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 11269376 - 11269332
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttc 184  Q
    |||| |||||||||||||| |||| ||||||||||||| ||||||    
T  11269376 agtttactgccgaagttttcctcggcagttaactgcagccggttc 11269332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 36134392 - 36134320
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    ||||||||| |||| ||||| |||| ||||||||||||| ||| | | ||||| ||||| |||||||| ||||    
T  36134392 cagttaactcccgaggttttcctcggcagttaactgcagacggatttctaaaacttcggtagttaacttccga 36134320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 39999542 - 39999590
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaac 146  Q
    ||||||||| |||||||||||| ||||||||| ||| ||| ||||||||    
T  39999542 ggtgtattttcttatttaatttaaggtttgaatttcctcggcagttaac 39999590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 273
Target Start/End: Original strand, 55282870 - 55282950
Alignment:
Q  193 ttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctc 273  Q
    ||||||||||||||| | | ||| |||||||||| |||||||| ||||||| | ||  || |||||||| || ||||||||    
T  55282870 ttcggcagttaactgtcaatggacatttgaataaattactcgtgtttctcaaccaatgcatatatgtcaacaacaattctc 55282950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 1e-54; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 102 - 274
Target Start/End: Complemental strand, 30192598 - 30192426
Alignment:
Q  102 tatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagt 201  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  30192598 tatttccttatttaatttcaggtttgaaattcctcggcagttaactgccgaagttttcctcgacagttaactgcagccggttctttaaaatttcggcagt 30192499  T
Q  202 taactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctca 274  Q
    |||||||||| ||  |||||| |||||||||||| ||||||||  ||| ||||| ||||| || |||| ||||    
T  30192498 taactgccgaagggcatttgagtaatttactcgtgtttctcagtcaaatcaaatgtgtcaacagcaatactca 30192426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 100 - 255
Target Start/End: Original strand, 41623013 - 41623168
Alignment:
Q  100 tgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggca 199  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| | |||| ||||| ||||||| |||||||||||||||||||||    
T  41623013 tgtattttcttatttaatttcaggtttgaaattcttcgacagttaactgccgaagttgtcctcggcagtttactgcagccggttctttaaaatttcggca 41623112  T
Q  200 gttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    |||||||||||| || ||||||  ||| |||| ||| |||||||||||||||||||    
T  41623113 gttaactgccgaagggtatttgggtaaattacccgtgtttctcagctaaaccaaat 41623168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 98 - 243
Target Start/End: Complemental strand, 35671192 - 35671047
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    ||||||||||||||||||| |||| ||||||||||| ||| |||||||||||| ||||||| |||| ||||||||||||| ||||||||||||||||||     
T  35671192 ggtgtatttccttatttaagttcatgtttgaaattcctcggcagttaactgccaaagttttcctcggcagttaactgcagccggttctttaaaatttcga 35671093  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctca 243  Q
    ||||||| |||||||| | |||| | |||||||||||| |||||||    
T  35671092 cagttaattgccgaggaacatttaagtaatttactcgtgtttctca 35671047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 98 - 274
Target Start/End: Original strand, 40789170 - 40789346
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||  || |||| |||| ||||||||||||| || |||||||||||||| |    
T  40789170 ggtgtatttccttatttaatttcaggtttgaaattcctcggcagttaactgctaaaattttcctcggcagttaactgcagccgattctttaaaatttcag 40789269  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctca 274  Q
     | ||||||||| | ||| ||||||||||||||||| | |||||||   ||||||||| ||||| || |||| ||||    
T  40789270 taattaactgccaatggacatttgaataatttactcatgtttctcaatcaaaccaaatgtgtcaacaacaatactca 40789346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 98 - 270
Target Start/End: Complemental strand, 2169797 - 2169626
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    ||||||||| |||||||||||| ||||||||||||| |||  ||||||||||||||||||| |||||||||||| ||||| || ||  || ||| |||||    
T  2169797 ggtgtattttcttatttaattttaggtttgaaattcttcggtagttaactgccgaagttttcctcgacagttaa-tgcagccgatttcttcaaaattcgg 2169699  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaatt 270  Q
    || ||||||||  | | |||||||| ||| ||| | || ||||||||| |||| |||||||||| || |||||    
T  2169698 caattaactgcaaaagaatatttgagtaaattaatagtgtttctcagccaaacaaaatatgtcaacaacaatt 2169626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 98 - 207
Target Start/End: Original strand, 35282357 - 35282472
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagtt------aactgccgaagtttttctcgacagttaactgcagtcggttctttaaaa 191  Q
    |||||||||||||||||||||||||||||||||||  |||||| ||      ||||||||||||||| |||| ||||||||||||| || |||||| |||    
T  35282357 ggtgtatttccttatttaatttcaggtttgaaatttctcgacaattaactgcaactgccgaagttttcctcggcagttaactgcagccgattcttttaaa 35282456  T
Q  192 tttcggcagttaactg 207  Q
    |||| |||||||||||    
T  35282457 tttcagcagttaactg 35282472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 144 - 239
Target Start/End: Original strand, 2170564 - 2170659
Alignment:
Q  144 aactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    ||||||| || |||| |||| ||||||||||||| ||||||||||||||||||  ||||||||| ||| |||||||||||||||||||| ||||||    
T  2170564 aactgccaaaattttcctcggcagttaactgcagccggttctttaaaatttcgatagttaactgtcgaaggatatttgaataatttacttgtattt 2170659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 139 - 273
Target Start/End: Original strand, 13838428 - 13838562
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatt 238  Q
    |||||||||||||| ||||| ||||  |||||||||||| |||||  || | | |||||||||||||||||||||| ||||||  |||||||||||| ||    
T  13838428 cagttaactgccgaggttttcctcggtagttaactgcagccggtttcttcagaattcggcagttaactgccgaggggtatttgggtaatttactcgtgtt 13838527  T
Q  239 tctcagctaaaccaaatatgtcagcatcaattctc 273  Q
    ||||||| |||| | || ||||| || ||||||||    
T  13838528 tctcagccaaacaacatgtgtcaacagcaattctc 13838562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 41622221 - 41622120
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgt 259  Q
    |||| ||||||||| ||| | ||||||||||||||||||||||||||||||| ||| |||||| |||||||||||| ||||||||  |||| |||| |||    
T  41622221 ctcggcagttaactacagccagttctttaaaatttcggcagttaactgccgatggacatttgagtaatttactcgtgtttctcagtcaaactaaatgtgt 41622122  T
Q  260 ca 261  Q
    ||    
T  41622121 ca 41622120  T

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Target: chr5; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 42912841 - 42912918
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgc 175  Q
    |||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||| ||||  ||||||||||    
T  42912841 ggtgtatttccttatttagtttcaggtttgaaattcttcggcagttaactgccgaagttttcctcggtagttaactgc 42912918  T

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Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 259
Target Start/End: Original strand, 35672038 - 35672129
Alignment:
Q  168 ttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgt 259  Q
    ||||||||| ||| ||||| |||| ||||||||||||||||||||||| |||||| |||||||||| | ||||||||| ||| |||||||||    
T  35672038 ttaactgcaatcgattcttcaaaacttcggcagttaactgccgagggacatttgagtaatttactcatgtttctcagccaaatcaaatatgt 35672129  T

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Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 155 - 273
Target Start/End: Original strand, 8539536 - 8539654
Alignment:
Q  155 tttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaa 254  Q
    |||| |||| ||||||||||||| ||| | | ||||| |||||||||||||||||||||| ||||||| ||||||||| || ||||||||| ||||  ||    
T  8539536 ttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttacttgtgtttctcagccaaactcaa 8539635  T
Q  255 tatgtcagcatcaattctc 273  Q
    | ||||| || ||||||||    
T  8539636 tgtgtcaacagcaattctc 8539654  T

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Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 3891551 - 3891456
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||| ||||||| |||| ||||||||||||| ||  | | ||||| |||||||||||||||||||||| ||||||| ||||||||||||    
T  3891551 agtttactgccaaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgt 3891456  T

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Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 135 - 235
Target Start/End: Original strand, 3892440 - 3892537
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcg 234  Q
    |||| |||| |||||||||||||| |||| ||||||||||||| |||||   |||   ||||||||||||||||||||||| |||||| |||||||||||    
T  3892440 tcgatagtttactgccgaagttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgagggacatttgagtaatttactcg 3892536  T

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Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 261
Target Start/End: Complemental strand, 18512297 - 18512178
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    ||||||||||||||||||  |||| ||||||||||||| ||||| |   ||| ||||||||||||||||||| |   ||||||||||||||||||| |||    
T  18512297 agttaactgccgaagttt--ctcggcagttaactgcagccggttttactaaacttcggcagttaactgccgatgagcatttgaataatttactcgtgttt 18512200  T
Q  240 ctcagctaaaccaaatatgtca 261  Q
    || ||| |||| |||| |||||    
T  18512199 ctaagccaaactaaatgtgtca 18512178  T

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Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 155 - 272
Target Start/End: Original strand, 11348495 - 11348612
Alignment:
Q  155 tttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaa 254  Q
    |||| |||| ||||||||||||  ||| | | ||||| ||||||||||||||||||||| | |||||| |||||||||||| ||||||||| ||||  ||    
T  11348495 ttttcctcggcagttaactgcatccggatttctaaaacttcggcagttaactgccgaggaacatttgagtaatttactcgtgtttctcagccaaactcaa 11348594  T
Q  255 tatgtcagcatcaattct 272  Q
    | ||||| || |||||||    
T  11348595 tgtgtcaacagcaattct 11348612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 139 - 255
Target Start/End: Complemental strand, 5845 - 5729
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatt 238  Q
    ||||||||| |||| ||||| |||| || |||||||||||||  | | ||||| ||||||||||||||||||||||   ||||| |||||||||||| |     
T  5845 cagttaactaccgaggttttcctcggcaattaactgcagtcgtatttctaaaacttcggcagttaactgccgaggggcgtttgagtaatttactcgtgtg 5746  T
Q  239 tctcagctaaaccaaat 255  Q
     | ||||||||||||||    
T  5745 gcacagctaaaccaaat 5729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 168 - 261
Target Start/End: Complemental strand, 35564301 - 35564208
Alignment:
Q  168 ttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtca 261  Q
    ||||||||||  ||||| || ||| ||||||||||||||||||| | |||||||| ||| |||||||| ||||||| | ||||||||| |||||    
T  35564301 ttaactgcagctggttccttcaaaattcggcagttaactgccgaagaatatttgagtaaattactcgtgtttctcaaccaaaccaaatgtgtca 35564208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 185
Target Start/End: Original strand, 30966607 - 30966693
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttct 185  Q
    ||||||||| |||||||||||| |||||| || ||| ||| |||||||||||||||||||| ||||  ||||| |||||| |||||||    
T  30966607 ggtgtattttcttatttaatttaaggttttaagttcctcggcagttaactgccgaagttttcctcg-tagttagctgcagccggttct 30966693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 20744018 - 20744072
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    |||| ||||||||||||| || |||||||||| ||||||||||||||||||||||    
T  20744018 ctcggcagttaactgcagccgattctttaaaacttcggcagttaactgccgaggg 20744072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 41622257 - 41622208
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaact 147  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  41622257 ggtgtatttccttatttaatttcaggtttgaaattactcggcagttaact 41622208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 165 - 245
Target Start/End: Original strand, 18155472 - 18155551
Alignment:
Q  165 cagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagc 245  Q
    ||||||||||||| |||||  || | | ||||| |||||||||||||||||||||||  |||||||||||| |||||||||    
T  18155472 cagttaactgcagccggtttcttcagaattcggtagttaactgccgagggatatttg-ctaatttactcgtgtttctcagc 18155551  T

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Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 273
Target Start/End: Original strand, 38408498 - 38408605
Alignment:
Q  166 agttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcat 265  Q
    |||||||||| ||||||| | ||||| |||||||||||| |||||| ||  ||||   ||| |||||||| | ||||||| ||||||||| ||||| ||     
T  38408498 agttaactgccgtcggttttctaaaacttcggcagttaattgccgaagggcatttaggtaaattactcgtgtgtctcagccaaaccaaatgtgtcaacaa 38408597  T
Q  266 caattctc 273  Q
    ||||||||    
T  38408598 caattctc 38408605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 20743987 - 20744033
Alignment:
Q  103 atttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    ||||||||||||||||||| ||||||||||| ||| |||||||||||    
T  20743987 atttccttatttaatttcatgtttgaaattcctcggcagttaactgc 20744033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 30708972 - 30708899
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttcttt-aaaatttcggcagttaactgccga 211  Q
    ||||||||| |||| ||||  |||| ||||||||||||| ||| | ||| ||||||||||||||||||||||||    
T  30708972 cagttaactcccgaggtttccctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 30708899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 35651406 - 35651349
Alignment:
Q  217 atttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctca 274  Q
    ||||||||||||||||||| ||||||||| ||||||||| ||||| || |||| ||||    
T  35651406 atttgaataatttactcgtgtttctcagccaaaccaaatgtgtcaacaacaatactca 35651349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 14715 - 14763
Alignment:
Q  187 taaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||| ||||||||||||||||||| ||| |||||| ||||||||||||    
T  14715 taaaacttcggcagttaactgccgaaggacatttgagtaatttactcgt 14763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 274
Target Start/End: Complemental strand, 5197058 - 5196978
Alignment:
Q  194 tcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctca 274  Q
    |||||||||||||||||||||  ||||  |||| |||||||| | ||||||| ||||| ||| ||||| || |||||||||    
T  5197058 tcggcagttaactgccgaggggcatttagataaattactcgtgtgtctcagcgaaacctaatgtgtcaacaacaattctca 5196978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 11346080 - 11346008
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactg 207  Q
    ||||||||||||| |||| ||||| |||| |||||||||||||  || | | ||||| |||||||||||||||    
T  11346080 tcgacagttaactaccgaggttttcctcggcagttaactgcagctggatttctaaaacttcggcagttaactg 11346008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 38971662 - 38971626
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgc 175  Q
    |||||||||||||||||||| ||||||||||||||||    
T  38971662 cagttaactgccgaagttttcctcgacagttaactgc 38971626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 7757394 - 7757319
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    |||||||||  ||| ||||| |||| ||||||||||||| ||| | | ||||| ||||||||||||||| ||||||    
T  7757394 cagttaactagcgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgtcgaggg 7757319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 7762248 - 7762323
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    ||||||||| | || ||||| |||||||||||||||||  ||  | | ||||| ||||||||||||||||||||||    
T  7762248 cagttaactcctgaggttttcctcgacagttaactgcaaccgaatttctaaaacttcggcagttaactgccgaggg 7762323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 17966890 - 17966965
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    ||||||||| ||||  |||| ||||  |||||||||||||||| | |||||  | |||||||||||||||||||||    
T  17966890 cagttaactaccgagattttcctcggtagttaactgcagtcggatttttaatttctcggcagttaactgccgaggg 17966965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 33993349 - 33993274
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    ||||||||| |||| ||||||| || ||||||||| ||| ||||| || ||  ||||||||||||||| |||||||    
T  33993349 cagttaactaccgaggtttttcacggcagttaactacagccggtttttgaatttttcggcagttaacttccgaggg 33993274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 35671994 - 35672045
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    ||||||||||||||||||||||||| |||||||||  ||| || ||||||||    
T  35671994 ggtgtatttccttatttaatttcagctttgaaattactcggcacttaactgc 35672045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 38855715 - 38855790
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcgg-ttctttaaaatttcggcagttaactgccgagg 213  Q
    ||||||||| |||| ||||| |||| ||||||||||| | ||| ||| || ||| |||||||||||||||||||||    
T  38855715 cagttaactaccgaggttttcctcggcagttaactgccgccggtttccttcaaacttcggcagttaactgccgagg 38855790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 8679578 - 8679529
Alignment:
Q  193 ttcggcagttaactgccgagggatatttgaataatttactcgtatttctc 242  Q
    ||||||||||||||||||||||| |||| | ||| |||||||| ||||||    
T  8679578 ttcggcagttaactgccgagggacatttcagtaaattactcgtgtttctc 8679529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 8680251 - 8680319
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    |||| |||||||||||||| ||||| |||||||||||| | ||||  |||   |||||||||||||||||||    
T  8680251 agtttactgccgaagttttcctcgatagttaactgcagcctgttccataa---ttcggcagttaactgccga 8680319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 13563682 - 13563625
Alignment:
Q  193 ttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaac 250  Q
    |||||||||||||||||||||| ||||||  ||||||||  || ||||||||| ||||    
T  13563682 ttcggcagttaactgccgaggggtatttgggtaatttacatgtgtttctcagccaaac 13563625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 27660009 - 27659912
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggtt-ctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||||||| |||| ||||| |||| |||||||| || ||||||| | | |||| |||||||||| ||| |||| ||  |||||| ||||||||||||    
T  27660009 cagttaactaccgaggttttcctcggcagttaaccgccgtcggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgt 27659912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 18538339 - 18538383
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggtt 183  Q
    ||||||||| |||||||||| |||| ||||||||||||| |||||    
T  18538339 cagttaactaccgaagttttcctcggcagttaactgcagccggtt 18538383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 27532621 - 27532661
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtc 179  Q
    |||||||||||||| ||||| ||||| ||||||||||||||    
T  27532621 cagttaactgccgaggttttcctcgatagttaactgcagtc 27532661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 126
Target Start/End: Complemental strand, 30966199 - 30966171
Alignment:
Q  98 ggtgtatttccttatttaatttcaggttt 126  Q
    |||||||||||||||||||||||||||||    
T  30966199 ggtgtatttccttatttaatttcaggttt 30966171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 41201801 - 41201753
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtcggtt 183  Q
    ||||||||||||| |||| ||||| |||| ||||||||||||| |||||    
T  41201801 tcgacagttaactaccgaggttttcctcggcagttaactgcagccggtt 41201753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 2e-52; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 98 - 278
Target Start/End: Complemental strand, 11886068 - 11885889
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||     
T  11886068 ggtgtattttcttatttaatttcaggtttgaaattcctcgacagttaa-tgccgaagttttcctcggcagttaactgcagtcggttctttaaaatttcga 11885970  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctcatctt 278  Q
     | |||| |||||||||| ||||||||||||||||||| ||||||||| |||| |||| ||||| || |||| ||| ||||    
T  11885969 taattaattgccgagggacatttgaataatttactcgtgtttctcagccaaacgaaatgtgtcaacaacaatgctcctctt 11885889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 98 - 275
Target Start/End: Original strand, 14102311 - 14102488
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||| |||| ||||||| ||||| || ||||||||||||||||    
T  14102311 ggtgtatttccttatttaatttcatgtttgaaattcctcggcagttaactgccgaagttttcctcggcagttaattgcagccgattctttaaaatttcgg 14102410  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctcat 275  Q
    |||||||||| ||||||  |||||| |||||||||| | ||||||||| ||||||||| ||||| || |||| |||||    
T  14102411 cagttaactgtcgaggggcatttgagtaatttactcatgtttctcagccaaaccaaatgtgtcaacagcaatactcat 14102488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 98 - 275
Target Start/End: Original strand, 14412328 - 14412505
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||| |||| ||||||| ||||| || ||||||||||||||||    
T  14412328 ggtgtatttccttatttaatttcaagtttgaaattcctcggcagttaactgccgaagttttcctcggcagttaattgcagccgattctttaaaatttcgg 14412427  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctcat 275  Q
    |||||||||| ||||||  |||||| |||||||||| | ||||||||| ||||||||| ||||| || |||| |||||    
T  14412428 cagttaactgtcgaggggcatttgagtaatttactcatgtttctcagccaaaccaaatgtgtcaacagcaatactcat 14412505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 98 - 255
Target Start/End: Original strand, 38555376 - 38555533
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||| ||||||||||||  ||| |||||||||||||||||||| |||| |||||||||||||  ||||||||||||||||||    
T  38555376 ggtgtatttccttatttaattttaggtttgaaatttttcggcagttaactgccgaagttttcctcggcagttaactgcagctggttctttaaaatttcgg 38555475  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    |||||||||||||| |||||||||| ||| |||||||| |||||| || |||||||||    
T  38555476 cagttaactgccgaaggatatttgagtaaattactcgtgtttctcggccaaaccaaat 38555533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 98 - 261
Target Start/End: Original strand, 47751148 - 47751310
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||||||| ||||||||| ||||||| |||| ||||| | ||| ||| |||||||||    
T  47751148 ggtgtatttccttatttaatttcaggtttgaaattcctccgcagttaactgacgaagttttactcgaca-ttaaatgcagccagtttttttaaatttcgg 47751246  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtca 261  Q
    ||||||| |||||| || ||||||| |||||||||||| ||| |||||||||||||||||||||    
T  47751247 cagttaagtgccgaagggtatttgagtaatttactcgtgtttatcagctaaaccaaatatgtca 47751310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 98 - 255
Target Start/End: Complemental strand, 13644531 - 13644374
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    ||||||||||||||||||||||||| |||||||||| | | | |||||||||||||||||| |||| || |||||||||| |||||||||||||||||||    
T  13644531 ggtgtatttccttatttaatttcagatttgaaattctttggcggttaactgccgaagttttcctcggcatttaactgcagccggttctttaaaatttcgg 13644432  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    |||||||||||||  |||||||||  ||| |||||||| ||||||||| ||| |||||    
T  13644431 cagttaactgccgtaggatatttgggtaaattactcgtgtttctcagccaaatcaaat 13644374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 103 - 273
Target Start/End: Complemental strand, 19072542 - 19072372
Alignment:
Q  103 atttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagtt 202  Q
    ||||||||||||||||||| |||||||| || ||| |||||||||||| ||||||| |||| |||||||||| || || ||||||||||||| |||||||    
T  19072542 atttccttatttaatttcatgtttgaaaatcctcggcagttaactgccaaagttttcctcggcagttaactgtagccgattctttaaaattttggcagtt 19072443  T
Q  203 aactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctc 273  Q
    ||||| ||||||  |||||| |||||||||||| |||||||||  |||||||| ||| | || ||||||||    
T  19072442 aactgtcgaggggcatttgagtaatttactcgtgtttctcagccgaaccaaatgtgtgaacagcaattctc 19072372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 98 - 244
Target Start/End: Original strand, 13645305 - 13645451
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    ||||||||||||||||||||||||| ||| |||||| ||| |||||||||||| ||||||| |||| ||||||||||||| | ||||||||||||||| |    
T  13645305 ggtgtatttccttatttaatttcagatttaaaattcctcggcagttaactgcctaagttttcctcggcagttaactgcagcctgttctttaaaatttcag 13645404  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcag 244  Q
    ||||||||| |||||||  |||||  ||||||||||||  |||||||    
T  13645405 cagttaactcccgaggggcatttgtgtaatttactcgtggttctcag 13645451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 154 - 274
Target Start/End: Original strand, 30846814 - 30846934
Alignment:
Q  154 gtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaa 253  Q
    ||||| |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||| ||||| ||| |||||||    
T  30846814 gttttcctcggcagttaactgcagccggttctttaaaatttcggcagttaactgtcgaggggtatttgagtaatttactcgtgtttcttagccaaaccaa 30846913  T
Q  254 atatgtcagcatcaattctca 274  Q
    || | ||| ||||||| ||||    
T  30846914 atgtttcaacatcaatactca 30846934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 160 - 275
Target Start/End: Complemental strand, 14101496 - 14101381
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgt 259  Q
    |||| |||||| |||||| ||||||||||||||||||||||||||||||| ||||  |||||| |||||||||||| ||||||||| ||| ||||| |||    
T  14101496 ctcggcagttagctgcagccggttctttaaaatttcggcagttaactgccaaggggcatttgagtaatttactcgtgtttctcagccaaatcaaatgtgt 14101397  T
Q  260 cagcatcaattctcat 275  Q
     | ||||||| |||||    
T  14101396 gaacatcaatactcat 14101381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 160 - 275
Target Start/End: Complemental strand, 14411513 - 14411398
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgt 259  Q
    |||| |||||| |||||| ||||||||||||||||||||||||||||||| ||||  |||||| |||||||||||| ||||||||| ||| ||||| |||    
T  14411513 ctcggcagttagctgcagccggttctttaaaatttcggcagttaactgccaaggggcatttgagtaatttactcgtgtttctcagccaaatcaaatgtgt 14411414  T
Q  260 cagcatcaattctcat 275  Q
     | ||||||| |||||    
T  14411413 gaacatcaatactcat 14411398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 231
Target Start/End: Original strand, 48001339 - 48001467
Alignment:
Q  99 gtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggc 198  Q
    ||||||||| ||||||||||||||||||||||||| ||| ||||||| ||| |||||||| ||| ||||||||| |||    ||||||| |||||||| |    
T  48001339 gtgtatttctttatttaatttcaggtttgaaattcctcggcagttaattgctgaagttttcctccacagttaaccgca----gttcttttaaatttcgac 48001434  T
Q  199 agttaactgccgagggatatttgaataatttac 231  Q
    ||||||||||| |  || |||||| ||||||||    
T  48001435 agttaactgccaaaagacatttgagtaatttac 48001467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 161 - 273
Target Start/End: Complemental strand, 7974986 - 7974874
Alignment:
Q  161 tcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtc 260  Q
    ||||||||||||||||| |||||  || | | |||||||||||||||||||||| ||||||  |||||||||||| ||||||||| |||| | || ||||    
T  7974986 tcgacagttaactgcagccggtttcttcagaattcggcagttaactgccgaggggtatttgggtaatttactcgtgtttctcagccaaacaacatgtgtc 7974887  T
Q  261 agcatcaattctc 273  Q
    | |||||||||||    
T  7974886 aacatcaattctc 7974874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 142 - 255
Target Start/End: Original strand, 11886891 - 11887004
Alignment:
Q  142 ttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttct 241  Q
    |||||| |||||||||| |||  ||||||||||||| ||||||||||| |||||||||||||| ||| || |||||||||  ||| |||||||| |||||    
T  11886891 ttaacttccgaagttttcctcagcagttaactgcagccggttctttaagatttcggcagttaattgctgaaggatatttgggtaaattactcgtgtttct 11886990  T
Q  242 cagctaaaccaaat 255  Q
     ||| |||| ||||    
T  11886991 tagccaaactaaat 11887004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 17840894 - 17840990
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||||||| |||| ||||| |||| ||||||||||||||||| | | ||||| ||||||||||||||||||| | | |||||| ||||||||||||    
T  17840894 cagttaactaccgaggttttcctcggcagttaactgcagtcggatttctaaaacttcggcagttaactgccgatgaacatttgagtaatttactcgt 17840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 255
Target Start/End: Original strand, 12210595 - 12210710
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    |||| |||||||||||||| |||| ||||||||||| | ||  | | ||||| ||||||||||||||||||||||  |||||| ||||||||||||||      
T  12210595 agtttactgccgaagttttcctcggcagttaactgcggccgtatttctaaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtatgg 12210694  T
Q  240 ctcagctaaaccaaat 255  Q
    | |||| |||||||||    
T  12210695 cacagccaaaccaaat 12210710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 254
Target Start/End: Original strand, 36781453 - 36781568
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatt 238  Q
    |||||||||||||| ||||| ||||  |||||||||||||| |||  || ||| |||||||| ||| || |||||||||||||  ||| |||||||||||    
T  36781453 cagttaactgccgaggttttcctcgggagttaactgcagtctgtttcttcaaaattcggcaggtaattgtcgagggatatttgggtaaattactcgtatt 36781552  T
Q  239 tctcagctaaaccaaa 254  Q
    ||||||| ||| ||||    
T  36781553 tctcagccaaatcaaa 36781568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 145 - 245
Target Start/End: Original strand, 29097870 - 29097967
Alignment:
Q  145 actgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcag 244  Q
    ||||||||| |||| ||||  |||||||||||| ||||||  |||   ||||||||||||||||||||||||||||| |||| |||||||| ||||||||    
T  29097870 actgccgaatttttcctcggtagttaactgcagccggttccataa---ttcggcagttaactgccgagggatatttggataaattactcgtgtttctcag 29097966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 274
Target Start/End: Complemental strand, 38555133 - 38555024
Alignment:
Q  165 cagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagca 264  Q
    ||||||||||||| |||||||||||||||| ||||||||||| |||||    |||| | |||||||||||||||||||| | |||| |||| ||||| ||    
T  38555133 cagttaactgcagccggttctttaaaattttggcagttaactaccgagaagcatttaagtaatttactcgtatttctcaaccaaactaaatgtgtcaaca 38555034  T
Q  265 tcaattctca 274  Q
     |||| ||||    
T  38555033 acaatactca 38555024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 49140721 - 49140629
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| ||||||||||||| |||||   |||   |||||||||||||||||||||| ||||||| ||||||||||||    
T  49140721 agtttactgccgaagttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaggggtatttgagtaatttactcgt 49140629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 135 - 245
Target Start/End: Original strand, 38266104 - 38266211
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcg 234  Q
    |||| |||| |||||||||||||| || |  |||||||||||||||||||  |||   ||||||||||||||||||||||| |||||| ||||||||  |    
T  38266104 tcgatagtttactgccgaagttttccttggtagttaactgcagtcggttccataa---ttcggcagttaactgccgagggacatttgagtaatttacatg 38266200  T
Q  235 tatttctcagc 245  Q
    ||||| |||||    
T  38266201 tatttttcagc 38266211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 7137 - 7042
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| ||||||||||||| ||  | | ||||| ||||| ||||||||||||||||  |||||| ||||||||||||    
T  7137 agtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccgaggggcatttgagtaatttactcgt 7042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 135 - 273
Target Start/End: Original strand, 31324806 - 31324943
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtcgg-ttctttaaaatttcggcagttaactgccgagggatatttgaataatttactc 233  Q
    |||| ||||||||||||| ||||| ||||  |||||||| ||||||| ||||||| || |||||||||||| ||||||||| ||||||  | ||||||||    
T  31324806 tcgatagttaactgccgaggttttcctcggtagttaactacagtcggtttctttagaa-ttcggcagttaattgccgaggg-tatttgggttatttactc 31324903  T
Q  234 gtatttctcagctaaaccaaatatgtcagcatcaattctc 273  Q
    || ||||||||  |||||| || ||||| || ||||||||    
T  31324904 gtgtttctcagtcaaaccacatgtgtcaacaacaattctc 31324943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 38555174 - 38555123
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  38555174 ggtgtatttccttatttaatttcaggtttgaaattcttcggcagttaactgc 38555123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 140 - 245
Target Start/End: Complemental strand, 48000286 - 48000184
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    |||| |||||||||||  | |||||||||||||||||||||||||  |||   |||| ||||||||||||||||| |||||| |||| ||||| || |||    
T  48000286 agtttactgccgaagtcctcctcgacagttaactgcagtcggttccataa---ttcgacagttaactgccgaggggtatttggataaattactagtgttt 48000190  T
Q  240 ctcagc 245  Q
    ||||||    
T  48000189 ctcagc 48000184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 149
Target Start/End: Complemental strand, 30846034 - 30845984
Alignment:
Q  99 gtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  30846034 gtgtatttccttatttaatttcaggtttgaaattcctcggcagttaactgc 30845984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 270
Target Start/End: Complemental strand, 31323117 - 31322987
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    ||||||||||||| ||||||||||  |||||||| ||  | |||  || ||| ||||||||||||||| ||| || ||||   ||||||||| |||||||    
T  31323117 agttaactgccgaggtttttctcggaagttaactacaaccagtttcttcaaaattcggcagttaactgtcgatgggtattcagataatttacccgtattt 31323018  T
Q  240 ctcagctaaaccaaatatgtcagcatcaatt 270  Q
    |||||| |||||| || ||||| ||||||||    
T  31323017 ctcagccaaaccacatgtgtcaacatcaatt 31322987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 42582185 - 42582088
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcg 234  Q
    |||| |||| |||||||||||||| |||| |||||||||| || |||||   |||   ||||||||||||||||||||||| |||||| |||||||||||    
T  42582185 tcgatagtttactgccgaagttttcctcggcagttaactgtagccggtttcataa---ttcggcagttaactgccgagggacatttgagtaatttactcg 42582089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 142 - 254
Target Start/End: Complemental strand, 12027405 - 12027294
Alignment:
Q  142 ttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttct 241  Q
    ||||||||||||||||| ||||  |||||||||||| | ||| || ||||||||||||||||||  ||||||   |||||| |||||||| ||| ||| |    
T  12027405 ttaactgccgaagttttcctcgg-agttaactgcagccagtttttcaaaatttcggcagttaacaaccgaggagcatttgagtaatttacccgtgttttt 12027307  T
Q  242 cagctaaaccaaa 254  Q
    |||| ||||||||    
T  12027306 cagccaaaccaaa 12027294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 9494806 - 9494885
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    ||||||||||||| |||| ||||| |||| ||||||||||||| ||||| |||||    |||||||||||||||||||||    
T  9494806 tcgacagttaactcccgaggttttcctcggcagttaactgcagccggttttttaattcctcggcagttaactgccgaggg 9494885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 31513002 - 31513053
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    |||||||||||||||||||||||| ||||||||||| ||| |||||||||||    
T  31513002 ggtgtatttccttatttaatttcaagtttgaaattcctcggcagttaactgc 31513053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 42583065 - 42583160
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| ||||||||||||| ||  | | ||||| |||  ||||||||||||||| | ||||||| ||||||||||||    
T  42583065 agtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttctacagttaactgccgagaggtatttgagtaatttactcgt 42583160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 47521438 - 47521351
Alignment:
Q  187 taaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctca 274  Q
    ||||| |||||||||||||||||||| |  ||||   ||| |||||||| ||||||||||||||||||| ||||| || |||||||||    
T  47521438 taaaacttcggcagttaactgccgagaggcatttaggtaaattactcgtgtttctcagctaaaccaaatgtgtcaacaacaattctca 47521351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 135 - 235
Target Start/End: Original strand, 49141621 - 49141718
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcg 234  Q
    |||| |||| |||||||||||||| |||| ||||||||||||| |||||   |||   ||| ||||||||||||||||||  |||||| |||||||||||    
T  49141621 tcgatagtttactgccgaagttttcctcggcagttaactgcagccggtttcataa---ttctgcagttaactgccgaggggcatttgagtaatttactcg 49141717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 235
Target Start/End: Original strand, 10524376 - 10524457
Alignment:
Q  154 gtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||| |||| |||||||||||  |||||| | ||||| |||| |||||||||||||||||  |||||| ||||||||||||    
T  10524376 gttttcctcggcagttaactgccatcggttttctaaaacttcgacagttaactgccgaggggcatttgagtaatttactcgt 10524457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 42795139 - 42795180
Alignment:
Q  194 tcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  42795139 tcggcagttaactgccgagggatatttgagtaatttactcgt 42795180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 46907604 - 46907512
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| ||||||||||||| |||||   |||   ||||||||||||||||||| ||  |||||| ||||||||||||    
T  46907604 agtttactgccgaagttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaagggcatttgagtaatttactcgt 46907512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 232
Target Start/End: Original strand, 8052 - 8144
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttact 232  Q
    |||| |||||||||||||| |||| ||||||||||||| ||  | | ||||| ||| | ||||||||||||||||  |||||| |||||||||    
T  8052 agtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttctgtagttaactgccgaggggcatttgagtaatttact 8144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 17834556 - 17834484
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    ||||||||| |||||||||| |||| ||||||||||| | |||||   ||||| |||||||||||||||||||    
T  17834556 cagttaactaccgaagttttcctcggcagttaactgccgccggtttactaaaacttcggcagttaactgccga 17834484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 250
Target Start/End: Original strand, 34139728 - 34139784
Alignment:
Q  194 tcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaac 250  Q
    |||||||||||||||||||||  |||||| |||||||||||| ||||||||| ||||    
T  34139728 tcggcagttaactgccgaggggcatttgagtaatttactcgtgtttctcagccaaac 34139784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 273
Target Start/End: Original strand, 37345134 - 37345241
Alignment:
Q  166 agttaactgcagtcggt-tctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagca 264  Q
    ||||||||||||||||| ||  ||||||| || |||||||||||||| ||| ||||   ||| |||||||| | |||||||  |||||||||||||| ||    
T  37345134 agttaactgcagtcggtatccataaaatt-cgacagttaactgccgaaggacatttaggtaaattactcgtgtgtctcagcctaaccaaatatgtcaaca 37345232  T
Q  265 tcaattctc 273  Q
    |||||||||    
T  37345233 tcaattctc 37345241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 38857172 - 38857080
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttac 231  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||||   | || |||| ||||||| | | |||||  |||||||||||||||    
T  38857172 cagttaactgccgaagtttttctcgatagttaaatgcagccggttcccaacaaattcgacagttaattactgaggggcatttgaataatttac 38857080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 274
Target Start/End: Original strand, 48901447 - 48901578
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    |||| |||||||||||||| ||||  |||||||||||| ||||||  |||   ||||||||||||||||| || || |||||  ||| |||||||| |||    
T  48901447 agtttactgccgaagttttcctcggtagttaactgcagccggttccataa---ttcggcagttaactgcctagagacatttgggtaaattactcgtgttt 48901543  T
Q  240 ctcagctaaaccaaatatgtcagcatcaattctca 274  Q
    |||||| ||  || || ||||| || |||||||||    
T  48901544 ctcagccaatgcatatgtgtcaacaacaattctca 48901578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 7953772 - 7953842
Alignment:
Q  147 tgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatattt 220  Q
    |||||||||||| |||  ||||||||||||||||||||  |||   |||||||||||||||||||||| |||||    
T  7953772 tgccgaagttttcctcagcagttaactgcagtcggttccataa---ttcggcagttaactgccgaggggtattt 7953842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 275 - 318
Target Start/End: Complemental strand, 21450166 - 21450123
Alignment:
Q  275 tcttgtattgttatgtcaagaacttaccttttagcatatcaaac 318  Q
    ||||||||||||||||| || |||||||||||||||||||||||    
T  21450166 tcttgtattgttatgtctagtacttaccttttagcatatcaaac 21450123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 27657086 - 27657011
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| ||||||||||||| ||  | | ||||| || |||||||||||||||||||  |||||||||||||||||||    
T  27657086 ctcggcagttaactgcagccgtatttctaaaactttggcagttaactgccgaggggcatttgaataatttactcgt 27657011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 241
Target Start/End: Complemental strand, 12080481 - 12080388
Alignment:
Q  145 actgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttct 241  Q
    |||||||||||||| ||||| |||||||||||| || |||  |||   |||||||||||||| |||| | | ||||| |||| ||||||||||||||    
T  12080481 actgccgaagttttcctcgatagttaactgcagccgattccataa---ttcggcagttaactaccgaagaacatttggataaattactcgtatttct 12080388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 245
Target Start/End: Original strand, 29113122 - 29113219
Alignment:
Q  145 actgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcag 244  Q
    ||||||||| |||| ||||  |||||||||||| ||| ||  |||   ||||||||| ||||||||||||||||||| |||| |||||| | ||||||||    
T  29113122 actgccgaatttttcctcggtagttaactgcagccggatccataa---ttcggcagtaaactgccgagggatatttggataaattactcatgtttctcag 29113218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 46738856 - 46738798
Alignment:
Q  154 gtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgag 212  Q
    |||||||||| ||||||||||||| ||| | | ||||| ||||||||||||||||||||    
T  46738856 gtttttctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgag 46738798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 46908491 - 46908573
Alignment:
Q  153 agtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||||| |||| ||||||||||||| ||  | | ||||| |||| ||||||||||||||| | ||||| ||||||||||||||    
T  46908491 agttttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactgccgagaggtatttaaataatttactcgt 46908573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 47750587 - 47750490
Alignment:
Q  145 actgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcag 244  Q
    |||||||||||||| ||||  |||||||||||| ||||||  |||   ||||||||||||||||||||||  ||||| |||| ||||  || ||||||||    
T  47750587 actgccgaagttttcctcgggagttaactgcagccggttccataa---ttcggcagttaactgccgaggggcatttggataaattaccagtgtttctcag 47750491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 38489293 - 38489378
Alignment:
Q  189 aaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctca 274  Q
    |||||||  ||||||||||| |||||| |||||| |||||||| | ||||| | ||| ||||||||| ||||| || |||||||||    
T  38489293 aaatttcaacagttaactgctgagggacatttgagtaatttacccatatttgtaagccaaaccaaatgtgtcaacaacaattctca 38489378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 42794261 - 42794169
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| ||||||||||||| |||||   |||   ||||||||||| |||||||||   |||||| ||||||||||||    
T  42794261 agtttactgccgaagttttcctcggcagttaactgcagccggtttcataa---ttcggcagttatctgccgaggagcatttgagtaatttactcgt 42794169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 25195326 - 25195239
Alignment:
Q  153 agtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctca 243  Q
    |||||| ||||| |||||||||||| || |||  |||   |||| |||||||||||||| | | |||||||||| ||||||||||||||||    
T  25195326 agttttcctcgatagttaactgcagacgattccataa---ttcgacagttaactgccgatgaacatttgaataaattactcgtatttctca 25195239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 29112442 - 29112398
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggtt 183  Q
    |||||||||||||||||||| |||| ||||||||||||| |||||    
T  29112442 cagttaactgccgaagttttcctcggcagttaactgcagccggtt 29112398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 45258024 - 45258104
Alignment:
Q  155 tttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||| ||||||||||||| ||  | | ||||||||  ||||||||||||||||||  |||||| ||||||||||||    
T  45258024 ttttcctcggcagttaactgcagccgtatttctaaaatttatgcagttaactgccgaggggcatttgagtaatttactcgt 45258104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 10705317 - 10705242
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    ||||||||| || | |||||||||| ||||||||||||| || || |||||  | |||||||||||||||| ||||    
T  10705317 cagttaactcccaaggtttttctcggcagttaactgcagccgattttttaatttctcggcagttaactgccaaggg 10705242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 14101532 - 14101481
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    ||||||||| |||||||||||||| ||||||||||| ||| |||||| ||||    
T  14101532 ggtgtattttcttatttaatttcacgtttgaaattcctcggcagttagctgc 14101481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 14411549 - 14411498
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    ||||||||| |||||||||||||| ||||||||||| ||| |||||| ||||    
T  14411549 ggtgtattttcttatttaatttcacgtttgaaattcctcggcagttagctgc 14411498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 30845999 - 30845916
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctca 243  Q
    |||| ||||||||||||| |||||||| ||||||| ||||||||||| | || | |||||||  ||| ||| |||| |||||||    
T  30845999 ctcggcagttaactgcagccggttcttaaaaattttggcagttaacttctgaagaatatttgggtaaattattcgtgtttctca 30845916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 45446674 - 45446717
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggtt 183  Q
    |||||||||| |||||||||||||| |||||||||| |||||||    
T  45446674 agttaactgcagaagtttttctcgatagttaactgctgtcggtt 45446717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 275
Target Start/End: Original strand, 12081228 - 12081333
Alignment:
Q  167 gttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatc 266  Q
    ||||||||||||||||||  |||   ||||||| ||||||||||| ||  ||||| |||| |||||||| ||||||||| ||  || || ||||| || |    
T  12081228 gttaactgcagtcggttccataa---ttcggcaattaactgccgaagggcatttggataaattactcgtgtttctcagccaatacatatgtgtcaacaac 12081324  T
Q  267 aattctcat 275  Q
    |||||||||    
T  12081325 aattctcat 12081333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 274
Target Start/End: Complemental strand, 48589820 - 48589739
Alignment:
Q  193 ttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctca 274  Q
    |||||||||||||||  ||| | |||||  ||||||||||||| ||||||||| |||| | || ||||| || |||||||||    
T  48589820 ttcggcagttaactgttgagaggtatttagataatttactcgtgtttctcagccaaacaacatgtgtcaacaacaattctca 48589739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 8522140 - 8522244
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatt 238  Q
    |||||||||||||| ||||| ||||  |||||||| ||| | |||  || | | ||||| |||||||| |||||||| |||||| ||  |||||||| ||    
T  8522140 cagttaactgccgaggttttcctcgggagttaactacagccagtttcttcacaattcggtagttaactaccgagggacatttgagtatattactcgtgtt 8522239  T
Q  239 tctca 243  Q
    |||||    
T  8522240 tctca 8522244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 11629765 - 11629801
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgc 175  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  11629765 cagttaactgccgaggttttcctcgacagttaactgc 11629801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 13921316 - 13921364
Alignment:
Q  187 taaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||| |||||||||||||||||||||   |||||| ||||||||||||    
T  13921316 taaaacttcggcagttaactgccgaggagcatttgagtaatttactcgt 13921364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 19044362 - 19044318
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggtt 183  Q
    ||||||||| |||||||||| |||| || ||||||||||||||||    
T  19044362 cagttaactaccgaagttttcctcggcaattaactgcagtcggtt 19044318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 20710274 - 20710318
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggtt 183  Q
    ||||||||| |||||||||| |||| || ||||||||||||||||    
T  20710274 cagttaactaccgaagttttcctcggcaattaactgcagtcggtt 20710318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 273
Target Start/End: Original strand, 27658031 - 27658111
Alignment:
Q  193 ttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctc 273  Q
    ||||||||||||||||| ||||| |||||  ||| ||||| || ||||||||| |||   ||| ||||| |||||||||||    
T  27658031 ttcggcagttaactgccaagggacatttgggtaaattactagtgtttctcagccaaaggtaatgtgtcaacatcaattctc 27658111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 126
Target Start/End: Original strand, 30846789 - 30846817
Alignment:
Q  98 ggtgtatttccttatttaatttcaggttt 126  Q
    |||||||||||||||||||||||||||||    
T  30846789 ggtgtatttccttatttaatttcaggttt 30846817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 34742395 - 34742439
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtc 179  Q
    ||||||||||||| |||| ||||| |||| |||||||||||||||    
T  34742395 tcgacagttaacttccgaggttttcctcggcagttaactgcagtc 34742439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 42025085 - 42025133
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtcggtt 183  Q
    ||||||||||||| ||||||||||||||   ||||||||||| ||||||    
T  42025085 tcgacagttaactaccgaagtttttctctgtagttaactgcaatcggtt 42025133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 42684200 - 42684236
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgc 175  Q
    ||||||||| || ||||||||||||||||||||||||    
T  42684200 cagttaactaccaaagtttttctcgacagttaactgc 42684236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 42795117 - 42795153
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgc 175  Q
    |||||||||||||||||||| |||| |||||||||||    
T  42795117 cagttaactgccgaagttttcctcggcagttaactgc 42795153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 2e-49; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 98 - 261
Target Start/End: Original strand, 13761007 - 13761170
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||| ||||||||||||| ||| |||||||||| ||||||||| |||| ||||||||||||| |||||||||||||||  ||    
T  13761007 ggtgtatttccttatttaatttaaggtttgaaattcgtcggcagttaactgtcgaagttttcctcggcagttaactgcagccggttctttaaaattgagg 13761106  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtca 261  Q
    |||||||||||||||||  |||||| |||||||||||| ||||||| | ||||||||| |||||    
T  13761107 cagttaactgccgaggggcatttgagtaatttactcgtgtttctcatccaaaccaaatgtgtca 13761170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 98 - 250
Target Start/End: Original strand, 5329977 - 5330129
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||| || |||||||||| | ||||||||||||||||     
T  5329977 ggtgtatttccttatttaattttaggtttgaaattcatcgacagttaactgtcgaagttttcctcggcaattaactgcagccagttctttaaaatttcga 5330076  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaac 250  Q
      |||||||||||| | |||||||| |||||||||||| ||||||||| ||||    
T  5330077 ttgttaactgccgaagaatatttgagtaatttactcgtgtttctcagccaaac 5330129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 98 - 254
Target Start/End: Original strand, 12628098 - 12628248
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||      || |||||||||  |||||||||||||||| ||    
T  12628098 ggtgtatttccttatttaatttcaggtttgaaattcctcgacagttaactgccgaagtttt-----ccaattaactgcaaccggttctttaaaattttgg 12628192  T
Q  198 cagtt-aactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaa 254  Q
    ||||| |||||||||||   |||||| |||||||||||| |||||| || ||||||||    
T  12628193 cagttaaactgccgagg--aatttgagtaatttactcgtgtttctcggccaaaccaaa 12628248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 98 - 209
Target Start/End: Original strand, 18609858 - 18609969
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||  |||||||||| | |||||   ||||| |||||    
T  18609858 ggtgtatttccttatttaatttcaggtttgaaattcctcggcagttaactgccgaagttttcctcggtagttaactgccgccggtttactaaaacttcgg 18609957  T
Q  198 cagttaactgcc 209  Q
    ||||||||||||    
T  18609958 cagttaactgcc 18609969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 98 - 242
Target Start/End: Original strand, 21268729 - 21268880
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttc-------tcgacagttaactgcagtcggttctttaaa 190  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||| |       ||| ||||||| ||||| || |||||||||    
T  21268729 ggtgtatttccttatttaatttcaggtttgaaattcctcagcagttaactgccgaagttttcctcggcagtcggcagttaattgcagccgattctttaaa 21268828  T
Q  191 atttcggcagttaactgccgagggatatttgaataatttactcgtatttctc 242  Q
    ||||| | |||||| | |||| |||||||||| ||| |||||||| ||||||    
T  21268829 atttcagaagttaagtcccgaaggatatttgagtaaattactcgtgtttctc 21268880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 41909052 - 41908978
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaac 172  Q
    ||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||| |||||||||||||    
T  41909052 ggtgtatttccttatttaatttcaggtttaaaattcttcaacagttaactgccgaagttttcctcgacagttaac 41908978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 41909680 - 41909777
Alignment:
Q  110 tatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactg 207  Q
    ||||||| ||||| |||||||||| ||| ||||||||||||||| |||| |||| ||||||||||||| || ||||||||||||||| ||||||||||    
T  41909680 tatttaagttcagatttgaaattcctcggcagttaactgccgaaattttcctcgccagttaactgcagccgattctttaaaatttcgacagttaactg 41909777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 160 - 270
Target Start/End: Complemental strand, 4208444 - 4208334
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgt 259  Q
    |||| ||||||||||||| |||||| || ||| ||||||||||||||||||| |||||||||| ||| |||||||| |||||||   ||||||||| |||    
T  4208444 ctcggcagttaactgcagccggttccttcaaaattcggcagttaactgccgaaggatatttgagtaaattactcgtgtttctcaatcaaaccaaatgtgt 4208345  T
Q  260 cagcatcaatt 270  Q
    || || |||||    
T  4208344 caacaacaatt 4208334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 42290347 - 42290269
Alignment:
Q  157 tttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||||||||||||||||||| || || ||||||||||||||||||||||||| ||||  |||||| ||||||||||||    
T  42290347 tttctcgacagttaactgcagccgattttttaaaatttcggcagttaactgccaaggggcatttgagtaatttactcgt 42290269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 273
Target Start/End: Complemental strand, 50036890 - 50036782
Alignment:
Q  166 agttaactgcagtcgg-ttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagca 264  Q
    |||||||||||| ||| ||||  |||| ||||||||||||||||||||||| |||||| ||||||||| || ||||||||| ||| ||||| ||||| ||    
T  50036890 agttaactgcagccgggttctagaaaacttcggcagttaactgccgagggacatttgagtaatttacttgtgtttctcagccaaatcaaatgtgtcaaca 50036791  T
Q  265 tcaattctc 273  Q
     ||||||||    
T  50036790 gcaattctc 50036782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 586610 - 586705
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| ||||||||||||| ||  | | ||||| ||||||||||||||||||| || ||||||| ||||||||||||    
T  586610 agtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgt 586705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 12627287 - 12627192
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    |||| ||||||||||||  ||||||||||||||||||||| |||||| |||| || ||||||  ||| |||||||| ||||||||| |||||||||    
T  12627287 ctcggcagttaactgcacccggttctttaaaatttcggcaattaactaccgaagggtatttgggtaaattactcgtgtttctcagccaaaccaaat 12627192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 245
Target Start/End: Complemental strand, 26769231 - 26769129
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    |||| |||||||||||||| || |  |||||||||||||||||||  |||   |||||||||||||||||||| ||||||||| ||| |||||||| |||    
T  26769231 agtttactgccgaagttttcctgggtagttaactgcagtcggttccataa---ttcggcagttaactgccgagagatatttgagtaaattactcgtgttt 26769135  T
Q  240 ctcagc 245  Q
    ||||||    
T  26769134 ctcagc 26769129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 30194489 - 30194394
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| ||||||||||||| ||  | | ||||| ||||||||||||||||||| || ||||||| ||||||||||||    
T  30194489 agtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgt 30194394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 42290810 - 42290891
Alignment:
Q  173 tgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaa 254  Q
    ||||| |||||||||||||||||  |||||||||| ||| |||||||||| ||| |||||||||||||||||  ||||||||    
T  42290810 tgcagccggttctttaaaatttcaacagttaactgtcgaaggatatttgagtaaattactcgtatttctcagtcaaaccaaa 42290891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 7943022 - 7942922
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgt 259  Q
    |||| ||||||||||||| || |||||| |||||| |||||||||||||||||| | |||||| |||||||||| | ||| ||||| ||| ||||| |||    
T  7943022 ctcggcagttaactgcagccgattcttttaaattttggcagttaactgccgaggaaaatttgagtaatttactcatgtttttcagccaaatcaaatgtgt 7942923  T
Q  260 c 260  Q
    |    
T  7942922 c 7942922  T

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Target: chr1; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 4883301 - 4883206
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| ||||||||||||| ||  | | ||||| |||||||||||||||  ||||| ||||||| ||||||||||||    
T  4883301 agtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgttgaggggtatttgagtaatttactcgt 4883206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 5329171 - 5329076
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    |||| ||||||||||||  |||||||||||||||||||||||||||||| ||  | ||||||  ||| ||| |||| ||||||||| |||||||||    
T  5329171 ctcggcagttaactgcaaccggttctttaaaatttcggcagttaactgctgaatggtatttgggtaaattattcgtgtttctcagccaaaccaaat 5329076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 12627323 - 12627272
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  12627323 ggtgtatttccttatttaatttcaggtttgaaattcctcggcagttaactgc 12627272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 15695902 - 15695831
Alignment:
Q  100 tgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaa 171  Q
    |||||||||||||||||||||||  | ||||||  ||| |||||||||||||||||||| ||||||||||||    
T  15695902 tgtatttccttatttaatttcagactcgaaatttctcggcagttaactgccgaagttttcctcgacagttaa 15695831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 42290380 - 42290329
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  42290380 ggtgtatttccttatttaatttcaggtttgaaatttctcgacagttaactgc 42290329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 139 - 274
Target Start/End: Complemental strand, 45780298 - 45780167
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatt 238  Q
    |||||||||||||||||||||||||  ||||| |||||| ||||||  |||   |||| |||||||||||||||||| |||||| ||| |||||| | ||    
T  45780298 cagttaactgccgaagtttttctcggtagtta-ctgcagccggttccataa---ttcgacagttaactgccgagggacatttgagtaaattactcatgtt 45780203  T
Q  239 tctcagctaaaccaaatatgtcagcatcaattctca 274  Q
    ||||||| ||  || || ||||| || |||||||||    
T  45780202 tctcagccaatgcatatgtgtcaacaacaattctca 45780167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 220
Target Start/End: Complemental strand, 7820196 - 7820118
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatattt 220  Q
    ||||||||||||||||||||| |||| |||||||||||| ||||||  |||   ||||||||||||||  ||||||||||||    
T  7820196 cagttaactgccgaagtttttttcgatagttaactgcagccggttccataa---ttcggcagttaactatcgagggatattt 7820118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 19914526 - 19914439
Alignment:
Q  148 gccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||||||||| |||| ||||||||||||| ||  | | ||||| ||||| ||||||||||||||||  |||||| ||||||||||||    
T  19914526 gccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggaagttaactgccgaggggcatttgagtaatttactcgt 19914439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 28456734 - 28456804
Alignment:
Q  148 gccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttg 221  Q
    ||||||||||| ||||| |||||||||||| ||||||| |||   |||||||||||||||||||||| ||||||    
T  28456734 gccgaagttttcctcgatagttaactgcagccggttctataa---ttcggcagttaactgccgaggggtatttg 28456804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 46909583 - 46909713
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    |||| |||||||||||||| ||||| |||||||||||| || |||  |||   |||||||||||||| || | | | |||| | |||||||||||| |||    
T  46909583 agtttactgccgaagttttcctcgatagttaactgcagccgattccataa---ttcggcagttaactaccaaagaacatttaagtaatttactcgtgttt 46909679  T
Q  240 ctcagctaaaccaaatatgtcagcatcaattctc 273  Q
    |||||||||| || || ||||| || ||||||||    
T  46909680 ctcagctaaaacatatctgtcaacaacaattctc 46909713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 139 - 233
Target Start/End: Complemental strand, 19161961 - 19161867
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactc 233  Q
    ||||||||| |||| ||||| |||| ||||||||||||| ||| | | ||||| |||||||||||||||||||  |  |||||| ||||||||||    
T  19161961 cagttaactcccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaaaggcatttgagtaatttactc 19161867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 139 - 273
Target Start/End: Original strand, 44470015 - 44470149
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatt--tcggcagttaactgccgagggatatttgaataatttactcgta 236  Q
    ||||||||| |||| ||||| |||| ||||||||||||| ||| |  || |||||  ||||||||||||||||||||| |||||| ||||||||   ||     
T  44470015 cagttaactcccgaggttttcctcggcagttaactgcagccggat--ttcaaattcctcggcagttaactgccgaggggtatttggataatttaaatgtg 44470112  T
Q  237 tttctcagctaaaccaaatatgtcagcatcaattctc 273  Q
    ||||||||| |||| | || ||||| || ||||||||    
T  44470113 tttctcagccaaacaacatgtgtcaacagcaattctc 44470149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 13636126 - 13636199
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttcttt-aaaatttcggcagttaactgccga 211  Q
    ||||||||| |||| ||||| |||| ||||||||||||| ||| | ||| ||||||||||||||||||||||||    
T  13636126 cagttaactaccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 13636199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 48228332 - 48228417
Alignment:
Q  165 cagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaac 250  Q
    ||||||||||||| | | | | ||||| ||||||||||||||||||| ||| |||||| |||||||||||| ||| ||||| ||||    
T  48228332 cagttaactgcagccagatttctaaaacttcggcagttaactgccgaaggacatttgagtaatttactcgtgtttttcagccaaac 48228417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 48455576 - 48455531
Alignment:
Q  100 tgtatttccttatttaatttcaggtttgaaattcatcgacagttaa 145  Q
    |||||||||||||||||||||||||||||||||  |||||||||||    
T  48455576 tgtatttccttatttaatttcaggtttgaaatttctcgacagttaa 48455531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 29424449 - 29424377
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    ||||||||| |||||||||| ||||  |||||||||||| ||||| ||| ||| ||||||| |||||||||||    
T  29424449 cagttaactaccgaagttttcctcggtagttaactgcagccggtttttttaaacttcggcaattaactgccga 29424377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 41804033 - 41804109
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    ||||||||||||| |||| ||||| |||| ||||||||||||||||||| || ||    ||||||||||||||||||    
T  41804033 tcgacagttaactaccgaggttttcctcggcagttaactgcagtcggtttttgaattcctcggcagttaactgccga 41804109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 49927513 - 49927592
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaat-ttcggcagttaactgccgaggg 214  Q
    ||||||||||||| |||| |||||||||| |||||||||  || ||||| |||||| | ||||||||||||||||||||||    
T  49927513 tcgacagttaactaccgaggtttttctcggcagttaactatagccggtt-tttaaattcttcggcagttaactgccgaggg 49927592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 5329207 - 5329156
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    ||||||||||||||||||||||||| || ||||||| ||| |||||||||||    
T  5329207 ggtgtatttccttatttaatttcagattcgaaattcctcggcagttaactgc 5329156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 278
Target Start/End: Complemental strand, 21141066 - 21140955
Alignment:
Q  167 gttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatc 266  Q
    ||||||||| ||||||| | ||||| |||||||||||| || ||| ||| ||||   ||| |||||||| | ||||||| ||||||||| ||||| || |    
T  21141066 gttaactgccgtcggttttctaaaacttcggcagttaattgtcgaaggacatttaggtaaattactcgtgtgtctcagccaaaccaaatgtgtcaacaac 21140967  T
Q  267 aattctcatctt 278  Q
    ||||||| ||||    
T  21140966 aattctcttctt 21140955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 29438024 - 29438099
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    ||||||| | |||| ||||| ||||  |||||||||||| ||||| ||||| ||||| ||||||||||||||||||    
T  29438024 cagttaattaccgaggttttcctcggtagttaactgcagccggttttttaatatttctgcagttaactgccgaggg 29438099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 272
Target Start/End: Original strand, 36184316 - 36184423
Alignment:
Q  166 agttaactgcagtcggttcttt-aaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagca 264  Q
    |||||||||||||||| | ||  |||| |||| |||||||||| |||| | ||||||| ||||||||||||||||||| || ||| ||| | ||||| ||    
T  36184316 agttaactgcagtcggattttagaaaacttcgacagttaactgtcgagaggtatttgagtaatttactcgtatttctcggccaaatcaattgtgtcaaca 36184415  T
Q  265 tcaattct 272  Q
     |||||||    
T  36184416 acaattct 36184423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 37992555 - 37992633
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttg 221  Q
    |||| |||||||||||||| |||| ||||||||||||| |||||   |||   ||||||||||||||| |||||||||||||    
T  37992555 agtttactgccgaagttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgtcgagggatatttg 37992633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 245
Target Start/End: Original strand, 47653712 - 47653814
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    |||| |||||||||||||| |||| ||||||||||||| ||||| | |||   |||||||||||||||||||| |  |||||  ||| ||||| || |||    
T  47653712 agtttactgccgaagttttcctcggcagttaactgcagccggttttataa---ttcggcagttaactgccgagaggcatttgggtaaattacttgtgttt 47653808  T
Q  240 ctcagc 245  Q
    ||||||    
T  47653809 ctcagc 47653814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 245
Target Start/End: Original strand, 49502827 - 49502929
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    ||||||||||||||||||| ||||  |||||||||||| | ||||  |||   |||||||||||| ||||||| || |||||  ||| |||||||| |||    
T  49502827 agttaactgccgaagttttcctcggtagttaactgcagccagttccataa---ttcggcagttaattgccgagagacatttgggtaaattactcgtgttt 49502923  T
Q  240 ctcagc 245  Q
    ||||||    
T  49502924 ctcagc 49502929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 6562857 - 6562963
Alignment:
Q  125 ttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaat 224  Q
    ||||| ||| ||| |||||||||| ||| |||||  |||  |||||||||||| ||||| |  |   | |||||||||||||||||||||||||||| ||    
T  6562857 ttgaatttcttcggcagttaactgtcgaggttttcttcggtagttaactgcagccggttttgaaccgtctcggcagttaactgccgagggatatttggat 6562956  T
Q  225 aatttac 231  Q
    |||||||    
T  6562957 aatttac 6562963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 270
Target Start/End: Original strand, 13535629 - 13535755
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcg 234  Q
    ||||||||||||||||||||||||     | |||||||||||| ||||||  |    ||||||  |||||||||||| |||||||| | || ||||||||    
T  13535629 tcgacagttaactgccgaagtttt-----atagttaactgcagccggttccat----tttcggtggttaactgccgaaggatattttagtattttactcg 13535719  T
Q  235 tatttctcagctaaaccaaatatgtcagcatcaatt 270  Q
    ||||||||||| | |||| || ||||| | ||||||    
T  13535720 tatttctcagcgataccacatgtgtcaacgtcaatt 13535755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 196
Target Start/End: Complemental strand, 13760876 - 13760780
Alignment:
Q  99 gtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttc-tttaaaatttcg 196  Q
    |||||||| |||||||||||| ||||||  ||||| |||  ||||||||||| ||||||| ||||| |||||| ||||| |||||| ||||||||||||    
T  13760876 gtgtattttcttatttaattttaggtttttaattcctcggtagttaactgccaaagttttcctcga-agttaa-tgcagacggttcttttaaaatttcg 13760780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 21699985 - 21699939
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagtta 144  Q
    ||||||||| |||||||||||||||||||||||||| ||| ||||||    
T  21699985 ggtgtattttcttatttaatttcaggtttgaaattcctcggcagtta 21699939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 29356733 - 29356787
Alignment:
Q  196 ggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaac 250  Q
    ||||||||||||||||||| |||||| |||||||||| || ||||||||| ||||    
T  29356733 ggcagttaactgccgaggggtatttggataatttacttgtgtttctcagccaaac 29356787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 13147572 - 13147519
Alignment:
Q  132 tcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttct 185  Q
    ||||||||||||||||| ||| ||||| ||||  ||||||||||||||||||||    
T  13147572 tcatcgacagttaactgtcgaggttttcctcggtagttaactgcagtcggttct 13147519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 19159692 - 19159619
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttcttt-aaaatttcggcagttaactgccga 211  Q
    ||||||||| |||| ||||| || | ||||||||||||| ||| | ||| ||||||||||||||||||||||||    
T  19159692 cagttaactaccgaggttttccttggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 19159619  T

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Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 43011841 - 43011800
Alignment:
Q  194 tcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||||||||||||||||||| ||||||| ||||||||||||    
T  43011841 tcggcagttaactgccgaggggtatttgagtaatttactcgt 43011800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 44598910 - 44598983
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgag 212  Q
    ||||||||| |||||||||| |||| ||||||||||||| ||| |   |||||||||| ||| |||||||||||    
T  44598910 cagttaactcccgaagttttcctcggcagttaactgcagccggattactaaaatttcgacaggtaactgccgag 44598983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 47652741 - 47652700
Alignment:
Q  194 tcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||||||||||||||||||||| |||||| ||||||||||||    
T  47652741 tcggcagttaactgccgagggacatttgagtaatttactcgt 47652700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 48455545 - 48455508
Alignment:
Q  157 tttctcgacagttaactgcagtcggttctttaaaattt 194  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  48455545 tttctcgacagttaattgcagtcggttctttaaaattt 48455508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 49395646 - 49395541
Alignment:
Q  165 cagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagca 264  Q
    ||||||||||||| ||||||||| ||| ||||||  |||||| |||| || |||||| | || |||||||| ||| ||||| ||| ||||| ||||| ||    
T  49395646 cagttaactgcagccggttctttcaaaattcggctattaactaccgaagggtatttggacaaattactcgtgtttttcagccaaatcaaatgtgtcaaca 49395547  T
Q  265 tcaatt 270  Q
     |||||    
T  49395546 acaatt 49395541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 19915373 - 19915425
Alignment:
Q  193 ttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagc 245  Q
    ||||||||||||||||||| ||  |||||| |||||||||||| |||||||||    
T  19915373 ttcggcagttaactgccgaagggcatttgagtaatttactcgtgtttctcagc 19915425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 46217322 - 46217394
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    ||||||||| |||||||||| ||||  |||||||||||| || || ||| ||| ||||||| |||||||||||    
T  46217322 cagttaactaccgaagttttcctcggtagttaactgcagccgattttttcaaacttcggcaattaactgccga 46217394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 49875344 - 49875388
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttc 184  Q
    |||| |||||||||||||| ||||| |||||||||||||||||||    
T  49875344 agtttactgccgaagttttcctcgatagttaactgcagtcggttc 49875388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 1167630 - 1167587
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggtt 183  Q
    ||||||||||||| ||||| ||||| ||||||||||||||||||    
T  1167630 agttaactgccgaggttttcctcgatagttaactgcagtcggtt 1167587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 13149069 - 13149120
Alignment:
Q  193 ttcggcagttaactgccgagggatatttgaataatttactcgtatttctcag 244  Q
    ||||||| |||||||| ||||| ||||||| |||||||||||| ||||||||    
T  13149069 ttcggcaattaactgctgaggggtatttgagtaatttactcgtgtttctcag 13149120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 187
Target Start/End: Original strand, 17514730 - 17514777
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttcttt 187  Q
    ||||||||||||||||||| ||| | |||||||||| |||||||||||    
T  17514730 agttaactgccgaagttttcctcaatagttaactgccgtcggttcttt 17514777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 51271595 - 51271670
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    ||||||||  |||| ||||| |||| || |||||||||| ||| | | ||||| ||||||||||||||||||||||    
T  51271595 cagttaaccaccgaggttttcctcggcaattaactgcagccggatttctaaaacttcggcagttaactgccgaggg 51271670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 1656093 - 1656131
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcag 177  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  1656093 cagttaactaccgaggtttttctcgacagttaactgcag 1656131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 11828196 - 11828238
Alignment:
Q  131 ttcatcgacagttaactgccgaagtttttctcgacagttaact 173  Q
    ||||||| |||||||||||||||||||||||||  ||||||||    
T  11828196 ttcatcggcagttaactgccgaagtttttctcggtagttaact 11828238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 26770557 - 26770658
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatt 238  Q
    |||||||||||| || |||| ||||  |||||||||||| |||||   |||   |||||||||||||| ||||   |||||||||||| ||| |||||||    
T  26770557 cagttaactgccaaaattttcctcggtagttaactgcagccggtttcataa---ttcggcagttaactaccgaataatatttgaataaattattcgtatt 26770653  T
Q  239 tctca 243  Q
    |||||    
T  26770654 tctca 26770658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 28456518 - 28456453
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgc 208  Q
    |||| |||||||||||||| ||||| |||||||||||| ||||||  |||   ||||||||||||||||    
T  28456518 agtttactgccgaagttttcctcgatagttaactgcagccggttccataa---ttcggcagttaactgc 28456453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 47505910 - 47506024
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgt 259  Q
    ||||| |||||||||||| || || | ||||| ||||||| |||||||||||| |  ||||  |||| |||||| | | ||||||| ||||||||| |||    
T  47505910 ctcgatagttaactgcagccgattttctaaaacttcggcaattaactgccgagaggcatttagataaattactcttgtgtctcagccaaaccaaatgtgt 47506009  T
Q  260 cagcatcaattctca 274  Q
    || || ||| |||||    
T  47506010 caacagcaaatctca 47506024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 275
Target Start/End: Complemental strand, 18609159 - 18609027
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    |||| |||||||||||||| |||| ||||||||||||| |||||   |||   ||||||||||||||| | ||||  ||||  |||| ||||| || |||    
T  18609159 agtttactgccgaagttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgtcaaggggcattttgataaattactagtgttt 18609063  T
Q  240 ctcagctaaaccaaatatgtcagcatcaattctcat 275  Q
    |||||| |||   ||| ||||| || ||||||||||    
T  18609062 ctcagccaaaggtaatgtgtcaacaacaattctcat 18609027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 29765547 - 29765608
Alignment:
Q  153 agtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    |||||| |||| ||||||||||||  ||| | | ||||| ||||||||||||||||||||||    
T  29765547 agttttcctcggcagttaactgcaaccggatttctaaaacttcggcagttaactgccgaggg 29765608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 39895068 - 39895019
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttc 184  Q
    |||||| ||||||||||||||||| ||||  ||||||||||| |||||||    
T  39895068 tcgacaattaactgccgaagttttcctcggtagttaactgcaatcggttc 39895019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 46141851 - 46141778
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgag 212  Q
    ||||||||| |||| ||||| |||| ||||||||||||| ||||| || ||    |||||||||||||||||||    
T  46141851 cagttaactaccgatgttttcctcggcagttaactgcagccggttattgaattcctcggcagttaactgccgag 46141778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 47586241 - 47586282
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcg 180  Q
    |||||||||||||| ||||||||||  |||||||||||||||    
T  47586241 cagttaactgccgaggtttttctcggtagttaactgcagtcg 47586282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 23442339 - 23442295
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttc 184  Q
    |||| |||||||||||||| ||||| |||||||||||| ||||||    
T  23442339 agtttactgccgaagttttcctcgatagttaactgcagccggttc 23442295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 29425340 - 29425412
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    ||||||||| |||||||||| ||||  |||||||||||  || || ||| ||| |||| ||||||||||||||    
T  29425340 cagttaactaccgaagttttcctcggtagttaactgcaaccgattttttcaaacttcgacagttaactgccga 29425412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 42572782 - 42572842
Alignment:
Q  160 ctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatattt 220  Q
    |||||||||||||||||| |||||  || ||| |||| |||||||||| |||||| |||||    
T  42572782 ctcgacagttaactgcagccggtttcttcaaaattcgacagttaactgtcgaggggtattt 42572842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 98 - 261
Target Start/End: Complemental strand, 54675 - 54512
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcgg 197  Q
    ||||||||||||||||||||||||  ||| |||||| ||| |||||||||| ||| ||||| |||| ||||||||||||| |||||||| ||||||| |     
T  54675 ggtgtatttccttatttaatttcatatttaaaattcctcggcagttaactgtcgatgttttcctcggcagttaactgcagccggttcttcaaaattttga 54576  T
Q  198 cagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtca 261  Q
    ||||||| |||||||||| |||||| ||||||||| || ||||| |||||||| |||| |||||    
T  54575 cagttaattgccgagggacatttgagtaatttacttgtgtttctaagctaaactaaatgtgtca 54512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 103 - 242
Target Start/End: Complemental strand, 127606 - 127467
Alignment:
Q  103 atttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagtt 202  Q
    |||||||||||||||||||  || ||||||  ||| |||||||||||||||||||| |||  ||||||||| ||  || |||||||||||||||||||||    
T  127606 atttccttatttaatttcattttggaaattactcggcagttaactgccgaagttttcctctgcagttaactacaaccgattctttaaaatttcggcagtt 127507  T
Q  203 aactgccgagggatatttgaataatttactcgtatttctc 242  Q
    |||| |||| |||||||||| |||||||||||| ||||||    
T  127506 aactaccgatggatatttgagtaatttactcgtgtttctc 127467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 134319 - 134389
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagg 213  Q
    |||| |||||||||||||| ||||  |||||||||||| ||||||| |||   |||||||||||||||||||||    
T  134319 agtttactgccgaagttttcctcggtagttaactgcagccggttctataa---ttcggcagttaactgccgagg 134389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 122 - 255
Target Start/End: Complemental strand, 65404 - 65270
Alignment:
Q  122 ggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggata-ttt 220  Q
    |||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| || |||||| |||||||||||||||||||||||  || | |||    
T  65404 ggtttgaaattcctcggcagttaactgccgaagttttcctcgacagttaactgcagccgattcttttaaatttcggcagttaactgccgaatgacatttt 65305  T
Q  221 gaataatttactcgtatttctcagctaaaccaaat 255  Q
    || |||||||||| | ||||||||| |||| ||||    
T  65304 gagtaatttactcatgtttctcagccaaacgaaat 65270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 4e-29; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 100 - 273
Target Start/End: Original strand, 15888765 - 15888937
Alignment:
Q  100 tgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggca 199  Q
    |||||||||||||||||||||||| || |||||  ||| |||| |||| ||| |||||| |||| ||||||||||||| ||||| | ||||| ||||| |    
T  15888765 tgtatttccttatttaatttcaggcttcaaatttctcggcagtaaactaccgcagttttcctcggcagttaactgcagccggttttctaaaacttcggta 15888864  T
Q  200 gttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctc 273  Q
    |||||||||||| || | ||||  ||| |||||||| ||||||||| ||||||||| ||| | |||||||||||    
T  15888865 gttaactgccgaagg-tgtttgggtaaattactcgtgtttctcagccaaaccaaatgtgtaaacatcaattctc 15888937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 15546352 - 15546426
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaac 172  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||    
T  15546352 ggtgtatttccttatttaatttcaggtttgaaattcctcggcagttaactgccgaagttttcctcggcagttaac 15546426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 35177661 - 35177569
Alignment:
Q  150 cgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctc 242  Q
    |||||||||||||||||||||||||||| || |||||||||||||| |||||||||||| || || |||||| |||| ||| |||| ||||||    
T  35177661 cgaagtttttctcgacagttaactgcagccgattctttaaaatttcagcagttaactgcagaagggtatttggataaattattcgtgtttctc 35177569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 11157846 - 11157771
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaact 173  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||  ||||||||| ||||||||||||||    
T  11157846 ggtgcatttccttatttaatttcaggtttgaaattcctcggcagttaactatcgaagttttcctcgacagttaact 11157771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 35096748 - 35096673
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaact 173  Q
    ||||||||| |||||||||||| ||||||||||||| ||| |||||||||||||||||||| |||| |||||||||    
T  35096748 ggtgtattttcttatttaattttaggtttgaaattcttcggcagttaactgccgaagttttcctcggcagttaact 35096673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 32034396 - 32034501
Alignment:
Q  165 cagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagca 264  Q
    ||||||||||||| |||||| || ||| || | |||||||||||||| || ||||||||||| |||||||| |||||  || ||||||||| ||||| ||    
T  32034396 cagttaactgcagccggttccttcaaaatttgtcagttaactgccgaagggtatttgaataaattactcgtgtttcttggccaaaccaaatgtgtcaaca 32034495  T
Q  265 tcaatt 270  Q
    ||||||    
T  32034496 tcaatt 32034501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 135 - 255
Target Start/End: Complemental strand, 11157783 - 11157663
Alignment:
Q  135 tcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcg 234  Q
    ||||||||||||| | |||||||| |||  ||||||||||||| || |||||||||||||||   |||||||||||| || ||||     || |||||||    
T  11157783 tcgacagttaactactgaagttttcctcagcagttaactgcagccgattctttaaaatttcgatggttaactgccgaagggtattaaggaaaattactcg 11157684  T
Q  235 tatttctcagctaaaccaaat 255  Q
    ||||||||||| |||||||||    
T  11157683 tatttctcagccaaaccaaat 11157663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 242
Target Start/End: Complemental strand, 15545795 - 15545696
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    |||| |||||||||||||| |||   |||||||||||| || |||| | |   |||| |||||||||||||||||| |||||||||||||||||||||||    
T  15545795 agtttactgccgaagttttcctcagtagttaactgcagccgcttctatta---ttcgacagttaactgccgagggacatttgaataatttactcgtattt 15545699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 17338727 - 17338806
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcag 177  Q
    ||||||||| ||||||||||||||| ||| |||||  ||| ||||||| |||||||||||| |||| |||||||||||||    
T  17338727 ggtgtattttcttatttaatttcagatttaaaatttctcggcagttaattgccgaagttttcctcggcagttaactgcag 17338806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 207
Target Start/End: Original strand, 9049070 - 9049156
Alignment:
Q  121 aggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactg 207  Q
    ||||||||| ||| ||| ||||||||| |||||||||| ||||  |||||||||||| ||||| ||| ||| |||||||||||||||    
T  9049070 aggtttgaagttcctcggcagttaactaccgaagttttcctcggtagttaactgcagccggttttttcaaacttcggcagttaactg 9049156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 25554764 - 25554678
Alignment:
Q  149 ccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||||||||| || | ||||||||||||| ||  | | ||||| |||||||||||||||||||||| ||||||| ||||||||||||    
T  25554764 ccgaagttttcctaggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgt 25554678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 2109574 - 2109490
Alignment:
Q  151 gaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||||||| |||| ||||||||||||| ||  | | ||||| |||||||||||||||||||| | ||||||| ||||||||||||    
T  2109574 gaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgagaggtatttgagtaatttactcgt 2109490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 9048144 - 9048072
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    ||||||||| |||||||||| ||||  |||||||||||| ||||| ||| ||| |||||||||||||||||||    
T  9048144 cagttaactaccgaagttttcctcggtagttaactgcagccggttttttcaaacttcggcagttaactgccga 9048072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 13158449 - 13158408
Alignment:
Q  194 tcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  13158449 tcggcagttaactgccgaggggtatttgaataatttactcgt 13158408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 13163305 - 13163264
Alignment:
Q  194 tcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  13163305 tcggcagttaactgccgaggggtatttgaataatttactcgt 13163264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 22305177 - 22305104
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttcttt-aaaatttcggcagttaactgccga 211  Q
    ||||||||| |||| ||||| |||| ||||||||||||| ||| | ||| ||||||||||||||||||||||||    
T  22305177 cagttaactaccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 22305104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 29097832 - 29097905
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgag 212  Q
    ||||||||| ||||||||||||||  ||||||||||||| ||| | | |||||||||| ||||||| |||||||    
T  29097832 cagttaactaccgaagtttttctcagcagttaactgcagccggatttctaaaatttcgacagttaattgccgag 29097905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 6760877 - 6760972
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| |||| || |||||||||| ||  | | ||||| |||||||||||||| || ||||  |||||| ||||||||||||    
T  6760877 agtttactgccgaagttttcctcggcaattaactgcagccgtatttctaaaacttcggcagttaactaccaaggggcatttgagtaatttactcgt 6760972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 11159394 - 11159445
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    ||||||||||||||||||||||||||||| |||||| | | |||||||||||    
T  11159394 ggtgtatttccttatttaatttcaggtttaaaattccttggcagttaactgc 11159445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 270
Target Start/End: Original strand, 14124723 - 14124853
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtattt 239  Q
    |||||||| |||||||||| |||  || |||||||||| || |||   |||| |||| ||||||| || ||||||  |||||| |||||||||||| |||    
T  14124723 agttaactaccgaagttttcctcagcaattaactgcagccgattccagaaaacttcgacagttaattgtcgaggggcatttgagtaatttactcgtgttt 14124822  T
Q  240 ctcagctaaaccaaatatgtcagcatcaatt 270  Q
    || ||| ||| ||||| ||||| || |||||    
T  14124823 cttagccaaatcaaatgtgtcaacaacaatt 14124853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 19757340 - 19757266
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    |||||||| |||||||||||||||| ||||||||||||| || | | ||||| |||| ||||||| |||| ||||    
T  19757340 agttaactaccgaagtttttctcgatagttaactgcagttggatttctaaaacttcgacagttaattgccaaggg 19757266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 13164265 - 13164357
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| |||||||||||||| ||||  |||||||||||| |||||   |||   ||||| ||||||||||||||||  |||||| ||||||||||||    
T  13164265 agtttactgccgaagttttcctcgggagttaactgcagccggtttcataa---ttcggtagttaactgccgaggggcatttgagtaatttactcgt 13164357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 14012380 - 14012448
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgc 208  Q
    ||||||||||||| ||||| |||| |||||||||| || ||| | | ||||| ||||||||||||||||    
T  14012380 agttaactgccgatgttttcctcggcagttaactgaagccggatttctaaaacttcggcagttaactgc 14012448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 32223517 - 32223589
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    ||||||||| |||||||||| ||||   ||||||||||| || || ||| ||| |||||||||||||||||||    
T  32223517 cagttaactaccgaagttttcctcggtggttaactgcagccgattttttcaaacttcggcagttaactgccga 32223589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 11840254 - 11840321
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaact 206  Q
    ||||||||| |||| ||||| |||||||||||||||||| ||  | | ||||| ||||||||||||||    
T  11840254 cagttaactaccgaggttttcctcgacagttaactgcagccgaatttctaaaacttcggcagttaact 11840321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 273
Target Start/End: Complemental strand, 28249954 - 28249819
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaat-ttcggcagttaactgccgagggatatttgaataatttactcgtat 237  Q
    ||||||||| |||| ||||| |||| ||||||||||| | ||||||  |||||  ||||||| ||||||| |||||   |||||| |||||||||||| |    
T  28249954 cagttaactaccgaggttttcctcggcagttaactgccgccggttccctaaaaacttcggcatttaactgtcgaggagcatttgagtaatttactcgtgt 28249855  T
Q  238 ttctcagctaaaccaaatatgtcagcatcaattctc 273  Q
      | |||| ||||||||| ||| | || ||||||||    
T  28249854 ggcacagccaaaccaaatgtgtaaacaacaattctc 28249819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 32643525 - 32643599
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagg 213  Q
    ||||||||| |||| ||||| |||||||||||||||||| ||| | |||||    | ||||||||||||||||||    
T  32643525 cagttaactaccgaggttttcctcgacagttaactgcagccggatttttaattccttggcagttaactgccgagg 32643599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 117858 - 117907
Alignment:
Q  98 ggtgtatttccttatttaatttcaggtttgaaattcatcgacagttaact 147  Q
    ||||||| ||||||||||||||||| |||||||||| | | |||||||||    
T  117858 ggtgtatctccttatttaatttcagttttgaaattccttggcagttaact 117907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 456099 - 456180
Alignment:
Q  193 ttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaatatgtcagcatcaattctca 274  Q
    ||||||||||||||||||||||  |||||  ||| |||||||| ||||||||| ||  || || ||||| || |||||||||    
T  456099 ttcggcagttaactgccgaggggcatttgggtaaattactcgtgtttctcagccaatgcatatgtgtcaacagcaattctca 456180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 13382698 - 13382601
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcgg-ttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||||||| |||| ||||| |||| ||||||||||| | ||| ||| | |||| |||| ||||| ||| |||| ||| |||||| ||||||||||||    
T  13382698 cagttaactaccgaggttttcctcggcagttaactgccgccggtttcctaaaaacttcgtcagtttactaccgaaggacatttgagtaatttactcgt 13382601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 35096685 - 35096624
Alignment:
Q  194 tcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaat 255  Q
    ||||||||||||| |||| ||  |||||| |||||||||||| ||||||| | |||||||||    
T  35096685 tcggcagttaactaccgaagggcatttgagtaatttactcgtgtttctcaaccaaaccaaat 35096624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 17337716 - 17337645
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgaggg 214  Q
    |||| |||||||||||||| ||||  |||||||||||| | |||| ||||   ||||||||||||||| ||||||    
T  17337716 agtttactgccgaagttttcctcggtagttaactgcagccagttccttaa---ttcggcagttaactgtcgaggg 17337645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 29076327 - 29076399
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    ||||||||| |||| ||||| |||  ||||||||||||| ||| | | ||||| |||| ||||||||||||||    
T  29076327 cagttaactaccgaggttttcctcagcagttaactgcagccggatttctaaaacttcgacagttaactgccga 29076399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 29109860 - 29109932
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    ||||||||| |||| ||||| |||  ||||||||||||| ||| | | ||||| |||| ||||||||||||||    
T  29109860 cagttaactaccgaggttttcctcagcagttaactgcagccggatttctaaaacttcgacagttaactgccga 29109932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 29111300 - 29111372
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    ||||||||| |||| ||||| |||  ||||||||||||| ||| | | ||||| |||| ||||||||||||||    
T  29111300 cagttaactaccgaggttttcctcagcagttaactgcagccggatttctaaaacttcgacagttaactgccga 29111372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 99 - 215
Target Start/End: Original strand, 398 - 514
Alignment:
Q  99 gtgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggc 198  Q
    |||||||||||||||||||||||||||| || ||| |||  |||||||| |||| ||||| |||||||||||||||||| ||| |  ||||   ||||||    
T  398 gtgtatttccttatttaatttcaggttttaagttcctcggtagttaactcccgaggttttcctcgacagttaactgcagccggattattaattcttcggc 497  T
Q  199 agttaactgccgaggga 215  Q
    |||||||||||||||||    
T  498 agttaactgccgaggga 514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 69226 - 69321
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    |||| ||||||||||||||  ||||||||||||||||  ||  | | ||||| |||||||||||||||||||||| ||||||| ||||||||||||    
T  69226 agtttactgccgaagttttcttcgacagttaactgcatccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgt 69321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 276
Target Start/End: Original strand, 1635 - 1753
Alignment:
Q  157 tttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaaccaaata 256  Q
    ||||||| ||||||||||||  || || | ||||| |||  ||||||||||||||  ||||||| ||||| |||||||| ||||| ||| |||||||||     
T  1635 tttctcggcagttaactgcaaccgattttctaaaacttcaacagttaactgccgaaagatatttaaataaattactcgtgtttct-agccaaaccaaatg 1733  T
Q  257 tgtcagcatcaattctcatc 276  Q
    ||| | ||||||||||||||    
T  1734 tgtaaacatcaattctcatc 1753  T

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Target: scaffold0283; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 596 - 528
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    |||| |||||||||||||||||||| |||||||||||| || |||  |||   |||||||||||||||||||    
T  596 agtttactgccgaagtttttctcgatagttaactgcagccgattccataa---ttcggcagttaactgccga 528  T

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Target: scaffold0283; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 1604 - 1653
Alignment:
Q  100 tgtatttccttatttaatttcaggtttgaaattcatcgacagttaactgc 149  Q
    ||||||| |||||||||||||||| ||||||||  ||| |||||||||||    
T  1604 tgtattttcttatttaatttcaggcttgaaatttctcggcagttaactgc 1653  T

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Target: scaffold0188 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 27920 - 28031
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcgg-ttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgtat 237  Q
    ||||||| |||||| ||||| ||| | |||||||||||  ||| |||||||||| ||||||| ||||||| | |||| ||||||  |||||||||||| |    
T  27920 cagttaagtgccgaggttttcctccatagttaactgcaaccggtttctttaaaa-ttcggcaattaactgtctaggggtatttgggtaatttactcgtgt 28018  T
Q  238 ttctcagctaaac 250  Q
    |||||||| ||||    
T  28019 ttctcagccaaac 28031  T

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Target: scaffold0176 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 250
Target Start/End: Original strand, 653 - 709
Alignment:
Q  194 tcggcagttaactgccgagggatatttgaataatttactcgtatttctcagctaaac 250  Q
    |||||||||||||||||||||  |||||| |||||||||||| ||||||||| ||||    
T  653 tcggcagttaactgccgaggggcatttgagtaatttactcgtgtttctcagccaaac 709  T

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Target: scaffold0341 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 18047 - 18153
Alignment:
Q  125 ttgaaattcatcgacagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaat 224  Q
    ||||| ||| ||| |||||||||| ||| |||||  |||  |||||||||||| ||||| |  |   | |||||||||||||||||||||||||||| ||    
T  18047 ttgaatttcttcggcagttaactgtcgaggttttcttcggtagttaactgcagccggttttgaaccgtctcggcagttaactgccgagggatatttggat 18146  T
Q  225 aatttac 231  Q
    |||||||    
T  18147 aatttac 18153  T

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Target: scaffold0101 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 36538 - 36611
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttcttt-aaaatttcggcagttaactgccga 211  Q
    ||||||||| |||| ||||| |||| ||||||| ||||| ||| | ||| ||||||||||||||||||||||||    
T  36538 cagttaactaccgaggttttcctcggcagttaattgcagccggatttttcaaaatttcggcagttaactgccga 36611  T

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Target: scaffold0199 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 12392 - 12464
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    ||||||||| |||| |||||  ||| ||||||||||||| ||| | | ||||| |||||||||||||||||||    
T  12392 cagttaactaccgaggttttcatcggcagttaactgcagccggatttctaaaacttcggcagttaactgccga 12464  T

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Target: scaffold0199; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 10721 - 10625
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccgagggatatttgaataatttactcgt 235  Q
    ||||||||| |||| ||||  |||| ||||||||||| | |||||   ||||| |||||||||||| |||||| ||  |||| | ||||||||||||    
T  10721 cagttaactaccgaggtttccctcggcagttaactgccgccggtttactaaaacttcggcagttaattgccgaagggcatttaagtaatttactcgt 10625  T

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Target: scaffold0184 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 18297 - 18369
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    ||||||||| |||| |||||  |||||||| |||||||||||| | | ||||| ||||||||||||| |||||    
T  18297 cagttaactaccgaggttttcttcgacagtaaactgcagtcggatttctaaaacttcggcagttaaccgccga 18369  T

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Target: scaffold0078 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 54547 - 54475
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccga 211  Q
    ||||||||| |||| |||||  |||||||| |||||||||||| | | ||||| ||||||||||||| |||||    
T  54547 cagttaactaccgaggttttcttcgacagtaaactgcagtcggatttctaaaacttcggcagttaaccgccga 54475  T

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Target: scaffold0494 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 5400 - 5325
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggtt-ctttaaaatttcggcagttaactgccgagg 213  Q
    ||||||||| |||| ||||| |||| ||||||||||| | ||||| | || ||| |||||||||||||||||||||    
T  5400 cagttaactaccgaggttttcctcggcagttaactgccgccggtttccttcaaacttcggcagttaactgccgagg 5325  T

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Target: scaffold0038 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 273
Target Start/End: Complemental strand, 50116 - 49981
Alignment:
Q  139 cagttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaat-ttcggcagttaactgccgagggatatttgaataatttactcgtat 237  Q
    ||||||||| |||| ||||| |||| ||||||||||| | ||||||  |||||  ||||||| ||||||| |||||   |||||| |||||||||||| |    
T  50116 cagttaactaccgaggttttcctcggcagttaactgccgccggttccctaaaaacttcggcatttaactgtcgaggagcatttgagtaatttactcgtgt 50017  T
Q  238 ttctcagctaaaccaaatatgtcagcatcaattctc 273  Q
      | |||| ||||||||| ||| | || ||||||||    
T  50016 ggcacagccaaaccaaatgtgtaaacaacaattctc 49981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 174
Target Start/End: Complemental strand, 14616 - 14582
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactg 174  Q
    ||||||||||||||||||| |||||||||||||||    
T  14616 agttaactgccgaagttttcctcgacagttaactg 14582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 210
Target Start/End: Original strand, 13914 - 13984
Alignment:
Q  140 agttaactgccgaagtttttctcgacagttaactgcagtcggttctttaaaatttcggcagttaactgccg 210  Q
    ||||||||||||| |||||||||| ||||||||||||| ||  | |||||  | ||||||||| |||||||    
T  13914 agttaactgccgatgtttttctcggcagttaactgcagccgtgtttttaatttctcggcagttcactgccg 13984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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