View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0812_high_134 (Length: 239)
Name: NF0812_high_134
Description: NF0812
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0812_high_134 |
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Alignment Details
Target: chr5 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 14848492 - 14848598
Alignment:
| Q |
1 |
caatcaattagcattgatcattagtggattagtatgattctactaataaaattattttatcaatttctcttttactatctaataatcaatcatagcttga |
100 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |
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| T |
14848492 |
caatcaattagcattgatcattagtggattagtatgattctactaataaaattattttatcaatttctcttttactatctaataatcaatcataacttca |
14848591 |
T |
|
| Q |
101 |
ggcttca |
107 |
Q |
| |
|
||||||| |
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|
| T |
14848592 |
ggcttca |
14848598 |
T |
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