View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0812_high_3 (Length: 705)

Name: NF0812_high_3
Description: NF0812
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0812_high_3
NF0812_high_3
[»] chr6 (6 HSPs)
chr6 (6-527)||(898144-898663)
chr6 (580-676)||(1223648-1223744)
chr6 (464-524)||(1194549-1194609)
chr6 (548-582)||(898092-898126)
chr6 (464-524)||(1183793-1183853)
chr6 (605-648)||(26207961-26208004)
[»] chr3 (5 HSPs)
chr3 (580-676)||(54812935-54813031)
chr3 (580-676)||(46427972-46428068)
chr3 (580-676)||(42793902-42793998)
chr3 (590-677)||(27156852-27156939)
chr3 (590-677)||(54346161-54346248)
[»] chr8 (2 HSPs)
chr8 (580-676)||(44145135-44145231)
chr8 (590-677)||(26617410-26617497)
[»] chr7 (6 HSPs)
chr7 (580-676)||(24472864-24472960)
chr7 (590-673)||(29214418-29214501)
chr7 (590-677)||(8020430-8020517)
chr7 (580-671)||(31047546-31047637)
chr7 (593-675)||(38111362-38111444)
chr7 (605-653)||(45753388-45753436)
[»] chr5 (2 HSPs)
chr5 (580-676)||(18882796-18882892)
chr5 (593-675)||(14024272-14024354)
[»] chr2 (3 HSPs)
chr2 (590-677)||(40197072-40197159)
chr2 (590-677)||(7305767-7305854)
chr2 (587-673)||(42161748-42161834)
[»] chr1 (4 HSPs)
chr1 (590-677)||(5308068-5308155)
chr1 (590-677)||(23949124-23949211)
chr1 (590-677)||(23085597-23085684)
chr1 (590-677)||(23722713-23722800)
[»] chr4 (3 HSPs)
chr4 (590-677)||(36895102-36895189)
chr4 (590-654)||(34390514-34390578)
chr4 (593-675)||(1368771-1368853)


Alignment Details
Target: chr6 (Bit Score: 499; Significance: 0; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 499; E-Value: 0
Query Start/End: Original strand, 6 - 527
Target Start/End: Complemental strand, 898663 - 898144
Alignment:
Q  6 gtcgaataatatctcagagagtgacatcaaagacgagatgttgtgtaaactttaatgcattggagaaaggttttcttgggggaagagcactaagaacata 105  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  898663 gtcgaacaaaatctcagagagtgacatcaaagacgagatgttgtgtaaactttaatgcattggagaaaggttttcttgggggaagagcactaagaacata 898564  T
Q  106 ggctagtaggaccaaggtttcaatgattcagaagagacagagtatgtgcataattattttaggccaatgaaggcaccaaatttgagatcaagagatgggg 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  898563 ggctagtaggaccaaggtttcaatgattcagaagagacagagtatgtgcataattattttaggccaatgaaggcaccaaatttgagatcaagagatgggg 898464  T
Q  206 gtggtattggcacctctctatgtcaaaattcaggtaaaaccgaccttggttgtgtcgaaaaagttggaattgttcggccaaatataaaacattttctcta 305  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  898463 gtggtattggcacctct--atgtcaaaattcaggtaaaaccgaccttggttgtgtcgaaaaagttggaattgttcggccaaatataaaacattttctcta 898366  T
Q  306 ttgggattgaaatctggacaaaggttaataatttcgtctatgatggtttgaggtagctgagtatagagggtttcaaaattaagagtgctacattttgttt 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  898365 ttgggattgaaatctggacaaaggttaataatttcgtctatgatggtttgaggtagctgagtatagagggtttcaaaattaagagtgctacattttgttt 898266  T
Q  406 ttgatcccaagagaatatcaactatcgatgagttgaacaatgcctttagttttgggtatagcgaaagagggatcatcaaaatttaccctcactagtgcat 505  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  898265 ttgatcccaacagaatatcaactatcgatgagttgaacaatgcctttagttttgggtatagcgaaagagggatcatcaaaatttaccctcactagtgcat 898166  T
Q  506 tgcaagactttttgaatgtccc 527  Q
    ||||||||||||||||||||||    
T  898165 tgcaagactttttgaatgtccc 898144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 580 - 676
Target Start/End: Complemental strand, 1223744 - 1223648
Alignment:
Q  580 tgttgggatttctcctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggctt 676  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1223744 tgttgggatttctcctacttgcccatgttgtggaaatgatgatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcatgtatggctt 1223648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 464 - 524
Target Start/End: Complemental strand, 1194609 - 1194549
Alignment:
Q  464 tagcgaaagagggatcatcaaaatttaccctcactagtgcattgcaagactttttgaatgt 524  Q
    |||| |||||||||||||||||||||||||| |||||||||||| || |||||||||||||    
T  1194609 tagcaaaagagggatcatcaaaatttaccctgactagtgcattggaaaactttttgaatgt 1194549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 548 - 582
Target Start/End: Complemental strand, 898126 - 898092
Alignment:
Q  548 tcaactttgacatcaaagtaaaaagaatcagttgt 582  Q
    |||||||||||||||||||||||||||||||||||    
T  898126 tcaactttgacatcaaagtaaaaagaatcagttgt 898092  T

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Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 524
Target Start/End: Complemental strand, 1183853 - 1183793
Alignment:
Q  464 tagcgaaagagggatcatcaaaatttaccctcactagtgcattgcaagactttttgaatgt 524  Q
    |||| ||||||||||||| |||||||| ||| |||| ||||||| || |||||||||||||    
T  1183853 tagcaaaagagggatcatgaaaatttaacctgactaatgcattggaaaactttttgaatgt 1183793  T

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Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 648
Target Start/End: Original strand, 26207961 - 26208004
Alignment:
Q  605 tgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtga 648  Q
    |||||||||||||  ||||| |||||||||||||||||||||||    
T  26207961 tgttgtgggaatgcagatgagactgtccttcatgtgcttcgtga 26208004  T

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Target: chr3 (Bit Score: 93; Significance: 6e-45; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 580 - 676
Target Start/End: Complemental strand, 54813031 - 54812935
Alignment:
Q  580 tgttgggatttctcctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggctt 676  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54813031 tgttgggatttctcctacttgcccatgttgtgggaatgatgatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggctt 54812935  T

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Target: chr3; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 580 - 676
Target Start/End: Original strand, 46427972 - 46428068
Alignment:
Q  580 tgttgggatttctcctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggctt 676  Q
    ||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46427972 tgttgggatttctccgacttgcccatgttgtgggaatgatgattaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggctt 46428068  T

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Target: chr3; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 580 - 676
Target Start/End: Original strand, 42793902 - 42793998
Alignment:
Q  580 tgttgggatttctcctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggctt 676  Q
    |||||||||||| | | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42793902 tgttgggatttcccttgcttgcccatgttgtgggaatgatgatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggctt 42793998  T

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Target: chr3; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 590 - 677
Target Start/End: Complemental strand, 27156939 - 27156852
Alignment:
Q  590 tctcctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggcttt 677  Q
    |||||||||||||| |||||||| ||||| ||||||||||| |||||||||||||| ||||||||  | || || |||||||||||||    
T  27156939 tctcctacttgcccgtgttgtggaaatgaagatgaaactgttcttcatgtgcttcgcgattgcatctacgctacccaggtatggcttt 27156852  T

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Target: chr3; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 590 - 677
Target Start/End: Original strand, 54346161 - 54346248
Alignment:
Q  590 tctcctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggcttt 677  Q
    ||||||| |||||| |||||||| ||||| ||||||||||| |||||||||||||| |||||||| || || || |||||||||||||    
T  54346161 tctcctaattgcccgtgttgtggaaatgaagatgaaactgttcttcatgtgcttcgcgattgcatccacgctacccaggtatggcttt 54346248  T

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Target: chr8 (Bit Score: 85; Significance: 4e-40; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 580 - 676
Target Start/End: Original strand, 44145135 - 44145231
Alignment:
Q  580 tgttgggatttctcctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggctt 676  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44145135 tgttgggatttctccaacttgcccatgttgtgggaatgatgatgaaattgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggctt 44145231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 590 - 677
Target Start/End: Complemental strand, 26617497 - 26617410
Alignment:
Q  590 tctcctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggcttt 677  Q
    |||||||||||||| |||||||| ||||| ||||||||| | |||||||||||||| | ||||||  |||| ||||||||||||||||    
T  26617497 tctcctacttgcccgtgttgtggaaatgaagatgaaactattcttcatgtgcttcgcggttgcatctatgctactcaggtatggcttt 26617410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 4e-40; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 580 - 676
Target Start/End: Original strand, 24472864 - 24472960
Alignment:
Q  580 tgttgggatttctcctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggctt 676  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24472864 tgtttggatttctcctacttgcccatgttgtgggaatgatgatgaaactgtccttcacgtgcttcgtgattgcattcatgcaactcaggtatggctt 24472960  T

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Target: chr7; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 590 - 673
Target Start/End: Complemental strand, 29214501 - 29214418
Alignment:
Q  590 tctcctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatgg 673  Q
    |||||||||||||  |||||||| ||||| ||||||||||| ||||||||||||||||||||||| || || ||||||||||||    
T  29214501 tctcctacttgcctgtgttgtggaaatgaagatgaaactgttcttcatgtgcttcgtgattgcatccacgctactcaggtatgg 29214418  T

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Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 590 - 677
Target Start/End: Complemental strand, 8020517 - 8020430
Alignment:
Q  590 tctcctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggcttt 677  Q
    ||||||| |||||| | |||||| ||||| ||||||||||| |||||||||||||| |||||||| || || || |||||||||||||    
T  8020517 tctcctaattgcccgtattgtggaaatgaagatgaaactgttcttcatgtgcttcgcgattgcatccacgctacccaggtatggcttt 8020430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 580 - 671
Target Start/End: Original strand, 31047546 - 31047637
Alignment:
Q  580 tgttgggatttctcctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtat 671  Q
    |||||||||||| || ||||  | ||||||||| ||||| ||||||| ||| ||||||||||| | | |||||||||||| ||||| |||||    
T  31047546 tgttgggatttcacccacttatcaatgttgtggtaatgatgatgaaattgttcttcatgtgctccataattgcattcatgtaactcgggtat 31047637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 593 - 675
Target Start/End: Complemental strand, 38111444 - 38111362
Alignment:
Q  593 cctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggct 675  Q
    |||||||| || ||||||| ||  ||||||||||| ||| ||||||| |||||||||||  | || || ||||||||||||||    
T  38111444 cctacttgtccttgttgtgcgagagaggatgaaacagtcattcatgtccttcgtgattgtgtgcacgctactcaggtatggct 38111362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 605 - 653
Target Start/End: Complemental strand, 45753436 - 45753388
Alignment:
Q  605 tgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgca 653  Q
    |||||||| ||||  || |||||||| ||||||||||||||||||||||    
T  45753436 tgttgtggaaatgccgacgaaactgttcttcatgtgcttcgtgattgca 45753388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 580 - 676
Target Start/End: Original strand, 18882796 - 18882892
Alignment:
Q  580 tgttgggatttctcctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggctt 676  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||| |||||||||||||||| |||| || ||||||||||||||||||||||||    
T  18882796 tgttgggatttttcctacttgcccatgttgtgggaataatgatgaaaatgtccttcatgtgctttgtgactgtattcatgcaactcaggtatggctt 18882892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 593 - 675
Target Start/End: Original strand, 14024272 - 14024354
Alignment:
Q  593 cctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggct 675  Q
    |||||||| || ||||||| ||  ||||||||||| ||| ||||||| |||||||||||  | || || ||||||||||||||    
T  14024272 cctacttgtccttgttgtgcgagagaggatgaaacagtcattcatgtccttcgtgattgtgtgcacgctactcaggtatggct 14024354  T

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Target: chr2 (Bit Score: 52; Significance: 2e-20; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 590 - 677
Target Start/End: Complemental strand, 40197159 - 40197072
Alignment:
Q  590 tctcctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggcttt 677  Q
    |||||||||||||| |||||||| ||||| ||||||| ||| |||| ||||||| |||||||||| |||||||||| |||||||||||    
T  40197159 tctcctacttgcccgtgttgtggaaatgaagatgaaattgttcttcgtgtgctttgtgattgcatccatgcaactcgggtatggcttt 40197072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 590 - 677
Target Start/End: Complemental strand, 7305854 - 7305767
Alignment:
Q  590 tctcctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggcttt 677  Q
    |||||||||||||| |||||||| ||||| ||||||||||| ||||| |||||||| ||||||||  | || ||||||||||||||||    
T  7305854 tctcctacttgcccgtgttgtggaaatgaagatgaaactgttcttcacgtgcttcgcgattgcatctacgctactcaggtatggcttt 7305767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 587 - 673
Target Start/End: Complemental strand, 42161834 - 42161748
Alignment:
Q  587 atttctcctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatgg 673  Q
    ||||| |||||||| || |||||||||||||   |||| || ||  |||||||||||||||||||||  |||||| |||||||||||    
T  42161834 atttcgcctacttgtccttgttgtgggaatgcaaatgagaccgttattcatgtgcttcgtgattgcaggcatgcatctcaggtatgg 42161748  T

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Target: chr1 (Bit Score: 48; Significance: 5e-18; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 590 - 677
Target Start/End: Original strand, 5308068 - 5308155
Alignment:
Q  590 tctcctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggcttt 677  Q
    |||||||||||||| |||||||| ||||| ||||||| ||| |||||||||||||| |||||||| || || || |||||||||||||    
T  5308068 tctcctacttgcccgtgttgtggaaatgaagatgaaaatgttcttcatgtgcttcgcgattgcatccacgctacccaggtatggcttt 5308155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 590 - 677
Target Start/End: Original strand, 23949124 - 23949211
Alignment:
Q  590 tctcctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggcttt 677  Q
    ||||||| |||||| |||||||| ||||| ||||||||||| |||||||||||||| |||||||| || || || |||||||||||||    
T  23949124 tctcctaattgcccgtgttgtggaaatgaagatgaaactgttcttcatgtgcttcgcgattgcatccacgctacccaggtatggcttt 23949211  T

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Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 590 - 677
Target Start/End: Complemental strand, 23085684 - 23085597
Alignment:
Q  590 tctcctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggcttt 677  Q
    |||||||||||| | |||| ||| ||||| ||||||| ||| |||||||||||||| ||||||||  | || ||||||||||||||||    
T  23085684 tctcctacttgcacgtgttatggaaatgaagatgaaattgttcttcatgtgcttcgcgattgcatctacgctactcaggtatggcttt 23085597  T

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Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 590 - 677
Target Start/End: Original strand, 23722713 - 23722800
Alignment:
Q  590 tctcctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggcttt 677  Q
    ||||||||||| || |||||||| ||||| ||||||| ||| |||||||||||||| |||||||| || || || || ||||||||||    
T  23722713 tctcctacttgtccgtgttgtggaaatgaagatgaaattgttcttcatgtgcttcgcgattgcatccacgctacccaagtatggcttt 23722800  T

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Target: chr4 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 590 - 677
Target Start/End: Complemental strand, 36895189 - 36895102
Alignment:
Q  590 tctcctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggcttt 677  Q
    |||||||||||||| |||||||| ||||| ||||||| |||  ||||||||||||| ||||||||  | || ||||||||||||||||    
T  36895189 tctcctacttgcccgtgttgtggaaatgaagatgaaattgtttttcatgtgcttcgcgattgcatctacgctactcaggtatggcttt 36895102  T

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Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 590 - 654
Target Start/End: Complemental strand, 34390578 - 34390514
Alignment:
Q  590 tctcctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcat 654  Q
    |||||||||||||  |||||||| ||||| ||||||||||| |||||||||||||| ||||||||    
T  34390578 tctcctacttgcctgtgttgtggaaatgaagatgaaactgttcttcatgtgcttcgcgattgcat 34390514  T

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Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 593 - 675
Target Start/End: Original strand, 1368771 - 1368853
Alignment:
Q  593 cctacttgcccatgttgtgggaatgaggatgaaactgtccttcatgtgcttcgtgattgcattcatgcaactcaggtatggct 675  Q
    |||||||| || ||||||| ||  ||||||||||| ||| ||||||| |||||||||||  | || || ||||||||||||||    
T  1368771 cctacttgtccttgttgtgcgagagaggatgaaacagtcattcatgtccttcgtgattgtgtgcacgctactcaggtatggct 1368853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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