View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0812_high_96 (Length: 303)
Name: NF0812_high_96
Description: NF0812
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0812_high_96 |
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Alignment Details
Target: chr5 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 6313574 - 6313846
Alignment:
| Q |
1 |
aacaatttttgttctttgtcatcaatcaatgtctcttataaaccaccacgttttcctttctttgtcatcaatctcttactaactccactaactaacataa |
100 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6313574 |
aacattttttgttctttgtcatcaatcaatgtctcttataaaccaccacgttttcctttctttgtcatcaatctcttactaactccactaactaacataa |
6313673 |
T |
|
| Q |
101 |
atcaatgttatgttagtgcgtgctcccttttttattcatgcattcacttcttatcctcaacaaccttaagctatgatctaatcttatatttattgcccag |
200 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
6313674 |
atcaatgttatgttagtgcgtgctcccttttttattcatgcattcacttcttatcctcaacaaccttaagctatgatctaatcttatatttattgcacag |
6313773 |
T |
|
| Q |
201 |
aggagttttttgttttcttaacattaacaacagactccaacaatggtttctactttgtctcacaaatgtctca |
273 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6313774 |
aggagttttttgttttcttaacattaacaacagactccaacaatggtttctactttgtctcacaaatgtctca |
6313846 |
T |
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