View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0812_low_109 (Length: 322)

Name: NF0812_low_109
Description: NF0812
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0812_low_109
NF0812_low_109
[»] chr1 (31 HSPs)
chr1 (42-321)||(18325096-18325373)
chr1 (49-135)||(3887339-3887425)
chr1 (139-229)||(49079311-49079401)
chr1 (186-230)||(15452431-15452475)
chr1 (139-230)||(41516885-41516976)
chr1 (49-104)||(47307506-47307561)
chr1 (76-138)||(22548187-22548249)
chr1 (254-322)||(213524-213592)
chr1 (51-135)||(4347052-4347136)
chr1 (254-318)||(23052172-23052235)
chr1 (75-138)||(213169-213232)
chr1 (184-215)||(6744694-6744725)
chr1 (139-206)||(15478121-15478188)
chr1 (223-314)||(36413755-36413846)
chr1 (59-138)||(47899371-47899450)
chr1 (53-123)||(12655356-12655426)
chr1 (51-113)||(13344851-13344913)
chr1 (184-226)||(17759880-17759922)
chr1 (81-135)||(43541585-43541639)
chr1 (77-138)||(3515943-3516004)
chr1 (145-230)||(9939824-9939909)
chr1 (49-114)||(26253026-26253091)
chr1 (77-138)||(45557437-45557498)
chr1 (266-322)||(1514385-1514441)
chr1 (219-279)||(6744830-6744890)
chr1 (138-206)||(8381881-8381949)
chr1 (261-313)||(24587949-24588001)
chr1 (186-230)||(32088669-32088713)
chr1 (254-322)||(34875076-34875144)
chr1 (52-116)||(38512430-38512494)
chr1 (184-228)||(47322004-47322048)
[»] chr5 (36 HSPs)
chr5 (50-291)||(10859856-10860103)
chr5 (145-230)||(29922798-29922883)
chr5 (139-228)||(34250449-34250538)
chr5 (272-319)||(12208823-12208870)
chr5 (139-202)||(15368141-15368204)
chr5 (145-318)||(3043012-3043185)
chr5 (51-135)||(2868313-2868397)
chr5 (186-225)||(12208944-12208983)
chr5 (52-135)||(40910881-40910964)
chr5 (181-299)||(38822274-38822392)
chr5 (49-98)||(5465398-5465447)
chr5 (83-136)||(10373024-10373077)
chr5 (151-208)||(28973768-28973825)
chr5 (51-107)||(14299436-14299492)
chr5 (186-230)||(38045394-38045438)
chr5 (56-135)||(7328524-7328603)
chr5 (193-224)||(11134290-11134321)
chr5 (44-107)||(14067032-14067095)
chr5 (250-281)||(18977377-18977408)
chr5 (164-226)||(10161749-10161811)
chr5 (148-230)||(10898629-10898711)
chr5 (54-120)||(14671137-14671203)
chr5 (186-322)||(1102096-1102232)
chr5 (169-230)||(1105367-1105428)
chr5 (49-98)||(6988228-6988277)
chr5 (54-107)||(29923013-29923066)
chr5 (57-138)||(35108355-35108436)
chr5 (51-100)||(43438590-43438639)
chr5 (57-93)||(1145039-1145075)
chr5 (75-135)||(6414251-6414311)
chr5 (94-138)||(8591704-8591748)
chr5 (266-310)||(10860096-10860140)
chr5 (182-230)||(10860451-10860499)
chr5 (186-230)||(13224715-13224758)
chr5 (186-238)||(17862468-17862520)
chr5 (250-322)||(37877084-37877156)
[»] chr7 (19 HSPs)
chr7 (147-230)||(45369068-45369151)
chr7 (51-137)||(40491688-40491774)
chr7 (139-316)||(38123659-38123835)
chr7 (139-230)||(15050191-15050281)
chr7 (44-107)||(35812411-35812474)
chr7 (49-138)||(42481778-42481867)
chr7 (163-230)||(45004907-45004974)
chr7 (139-230)||(48290289-48290380)
chr7 (184-230)||(12306677-12306723)
chr7 (186-231)||(21436095-21436140)
chr7 (249-322)||(27571887-27571960)
chr7 (54-135)||(28070813-28070894)
chr7 (58-115)||(34536755-34536812)
chr7 (94-139)||(45823310-45823355)
chr7 (186-235)||(48158836-48158885)
chr7 (186-230)||(12306922-12306966)
chr7 (79-135)||(36021258-36021314)
chr7 (266-322)||(40795976-40796032)
chr7 (186-230)||(45004965-45005009)
[»] chr4 (31 HSPs)
chr4 (44-118)||(48575487-48575561)
chr4 (49-135)||(24364083-24364169)
chr4 (57-113)||(38740287-38740343)
chr4 (147-230)||(1099742-1099825)
chr4 (51-133)||(43868246-43868328)
chr4 (58-135)||(5025575-5025652)
chr4 (77-121)||(12926922-12926966)
chr4 (81-135)||(17897799-17897853)
chr4 (184-230)||(25318990-25319036)
chr4 (51-136)||(33560461-33560545)
chr4 (186-238)||(29728947-29728999)
chr4 (169-231)||(471962-472025)
chr4 (187-230)||(33560667-33560710)
chr4 (139-230)||(41058824-41058915)
chr4 (160-226)||(2171706-2171772)
chr4 (262-308)||(4451496-4451542)
chr4 (48-102)||(12224465-12224519)
chr4 (150-216)||(43075972-43076038)
chr4 (249-322)||(4243412-4243485)
chr4 (58-135)||(21592545-21592622)
chr4 (187-224)||(24338547-24338584)
chr4 (77-122)||(24370578-24370623)
chr4 (147-208)||(26617745-26617806)
chr4 (49-98)||(34943436-34943485)
chr4 (145-238)||(46012681-46012774)
chr4 (74-135)||(47509857-47509918)
chr4 (145-206)||(50358134-50358195)
chr4 (76-136)||(8283275-8283335)
chr4 (254-322)||(10185224-10185292)
chr4 (81-121)||(23335265-23335305)
chr4 (75-138)||(53158947-53159011)
[»] chr2 (36 HSPs)
chr2 (48-137)||(6948445-6948534)
chr2 (136-208)||(43717237-43717309)
chr2 (51-138)||(11759747-11759834)
chr2 (145-230)||(37420293-37420378)
chr2 (51-135)||(12110937-12111021)
chr2 (139-206)||(7629760-7629827)
chr2 (242-317)||(11510972-11511046)
chr2 (63-138)||(37745786-37745861)
chr2 (260-322)||(4908826-4908888)
chr2 (74-132)||(22447527-22447585)
chr2 (267-317)||(28206720-28206770)
chr2 (260-314)||(37541333-37541387)
chr2 (74-119)||(7630538-7630583)
chr2 (49-134)||(17220417-17220502)
chr2 (145-206)||(40582653-40582714)
chr2 (141-205)||(1976986-1977050)
chr2 (222-318)||(6767673-6767769)
chr2 (178-230)||(39702528-39702580)
chr2 (57-135)||(3602420-3602499)
chr2 (186-277)||(6925652-6925743)
chr2 (145-227)||(16519350-16519433)
chr2 (249-312)||(33961978-33962041)
chr2 (51-118)||(36307075-36307142)
chr2 (219-310)||(44439249-44439340)
chr2 (57-116)||(45000418-45000477)
chr2 (184-230)||(11510896-11510942)
chr2 (269-319)||(16519489-16519539)
chr2 (184-230)||(36987208-36987254)
chr2 (57-135)||(38129404-38129482)
chr2 (54-91)||(3654787-3654824)
chr2 (254-319)||(4894147-4894212)
chr2 (189-230)||(4908737-4908778)
chr2 (51-135)||(1763283-1763367)
chr2 (184-228)||(15928532-15928576)
chr2 (145-205)||(37649595-37649655)
chr2 (266-322)||(42982586-42982642)
[»] chr6 (26 HSPs)
chr6 (59-135)||(10054955-10055031)
chr6 (139-230)||(7262969-7263060)
chr6 (139-231)||(29240547-29240639)
chr6 (51-138)||(1500010-1500097)
chr6 (51-135)||(19260774-19260858)
chr6 (169-229)||(19260980-19261040)
chr6 (55-140)||(10564807-10564893)
chr6 (254-319)||(34027407-34027472)
chr6 (145-206)||(34620790-34620851)
chr6 (145-206)||(34748227-34748288)
chr6 (230-314)||(9505776-9505860)
chr6 (56-107)||(9043723-9043774)
chr6 (76-134)||(3002827-3002885)
chr6 (186-216)||(6214875-6214905)
chr6 (260-322)||(34620922-34620984)
chr6 (260-322)||(34748359-34748421)
chr6 (249-322)||(1485133-1485206)
chr6 (184-225)||(2002566-2002607)
chr6 (55-116)||(3525039-3525100)
chr6 (73-138)||(14391015-14391080)
chr6 (66-135)||(20871626-20871695)
chr6 (49-86)||(25208734-25208771)
chr6 (186-231)||(33136578-33136623)
chr6 (139-230)||(10400791-10400883)
chr6 (100-136)||(10755399-10755435)
chr6 (139-195)||(19601715-19601771)
[»] chr3 (33 HSPs)
chr3 (49-135)||(24916592-24916678)
chr3 (164-235)||(21513420-21513491)
chr3 (140-206)||(3776438-3776504)
chr3 (51-113)||(30958147-30958209)
chr3 (51-113)||(30973959-30974021)
chr3 (139-228)||(3845210-3845299)
chr3 (48-133)||(39657963-39658048)
chr3 (189-314)||(51667100-51667225)
chr3 (145-206)||(52925731-52925792)
chr3 (57-113)||(31766160-31766216)
chr3 (52-135)||(25129430-25129513)
chr3 (63-114)||(49158642-49158693)
chr3 (213-282)||(8011304-8011373)
chr3 (51-135)||(42644316-42644401)
chr3 (186-230)||(2410026-2410070)
chr3 (145-225)||(29120128-29120208)
chr3 (186-230)||(43987648-43987692)
chr3 (139-230)||(1441477-1441568)
chr3 (48-135)||(27825270-27825357)
chr3 (184-239)||(35950991-35951046)
chr3 (56-115)||(49633997-49634056)
chr3 (49-135)||(25181262-25181348)
chr3 (260-322)||(35253454-35253516)
chr3 (75-121)||(44771862-44771908)
chr3 (57-110)||(584709-584762)
chr3 (285-322)||(31708226-31708263)
chr3 (44-113)||(41115275-41115344)
chr3 (49-106)||(48089610-48089667)
chr3 (251-291)||(1227698-1227738)
chr3 (49-121)||(38626764-38626836)
chr3 (261-305)||(48089693-48089737)
chr3 (254-322)||(51285600-51285668)
chr3 (55-115)||(53567990-53568050)
[»] chr8 (27 HSPs)
chr8 (272-319)||(13929687-13929734)
chr8 (66-138)||(2031884-2031956)
chr8 (51-138)||(10368075-10368162)
chr8 (186-225)||(13929808-13929847)
chr8 (140-230)||(11038081-11038171)
chr8 (249-319)||(35775222-35775292)
chr8 (51-121)||(37159381-37159451)
chr8 (184-230)||(38875359-38875405)
chr8 (90-135)||(34957018-34957063)
chr8 (58-135)||(41891782-41891859)
chr8 (148-232)||(8916819-8916903)
chr8 (51-135)||(36779453-36779537)
chr8 (273-317)||(37451952-37451996)
chr8 (51-107)||(38516360-38516416)
chr8 (57-99)||(1373107-1373149)
chr8 (139-229)||(39648242-39648332)
chr8 (57-135)||(41408258-41408336)
chr8 (184-229)||(4336344-4336389)
chr8 (77-122)||(18355753-18355798)
chr8 (49-138)||(32994128-32994217)
chr8 (139-204)||(35495158-35495223)
chr8 (51-115)||(35550283-35550347)
chr8 (193-230)||(36447966-36448003)
chr8 (49-85)||(2778354-2778390)
chr8 (57-121)||(5400118-5400182)
chr8 (51-115)||(10552892-10552956)
chr8 (57-137)||(38335751-38335830)
[»] scaffold0172 (1 HSPs)
scaffold0172 (51-135)||(15220-15304)
[»] scaffold0036 (1 HSPs)
scaffold0036 (186-316)||(943-1070)
[»] scaffold0361 (2 HSPs)
scaffold0361 (260-322)||(14101-14163)
scaffold0361 (139-197)||(14242-14300)
[»] scaffold1191 (1 HSPs)
scaffold1191 (74-135)||(55-116)
[»] scaffold0571 (1 HSPs)
scaffold0571 (74-135)||(7825-7886)
[»] scaffold0248 (1 HSPs)
scaffold0248 (49-98)||(13275-13324)
[»] scaffold0393 (1 HSPs)
scaffold0393 (139-230)||(12403-12495)
[»] scaffold0168 (1 HSPs)
scaffold0168 (163-228)||(31748-31813)


Alignment Details
Target: chr1 (Bit Score: 249; Significance: 1e-138; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 42 - 321
Target Start/End: Complemental strand, 18325373 - 18325096
Alignment:
Q  42 agaaactattttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaacatacgtt 141  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||    
T  18325373 agaaaccattttacattcaactcacttttatgtaaaatcaattttacaaaaccaattcat--aaaaccaatttttgtcaccgtagaaccaaacatatgtt 18325276  T
Q  142 tgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgattttaacttgaaaac 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  18325275 tgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgattttaacttgaaatc 18325176  T
Q  242 agaattaggagtttttgtttctacaattgatttttagcctcagatttattattcaacccacttttacatgaatgtatcca 321  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18325175 agaattaggagtttttgtttctacaattgatttttatcctcagatttattattcaacccacttttacatgaatgtatcca 18325096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 49 - 135
Target Start/End: Complemental strand, 3887425 - 3887339
Alignment:
Q  49 attttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaa-ccaatttttgtcaccgtagaaccaaaca 135  Q
    |||||||||| ||||||| ||||| |||||||| ||||||||||||||||||||||||| | |||||  ||||||| |||||||||||    
T  3887425 attttacattgaactcacctttatctaaaatca-ttttacaaaaccaattcattcaaaatcaaatttaagtcaccgcagaaccaaaca 3887339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 49079401 - 49079311
Alignment:
Q  139 gtttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgattt 229  Q
    ||||| ||||||||||||||    |||||  ||||||||| ||| ||| ||||||||||||||||||| | |||| |||||||||||||||    
T  49079401 gtttgattccacttttggagtgctcaaaatcgattccagaggtgtagagttgattttgacatgtttggttcttctagagtagaattgattt 49079311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 15452431 - 15452475
Alignment:
Q  186 aattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||    
T  15452431 aattgattttgacatctttggatgttctcgagtagaattgatttt 15452475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 230
Target Start/End: Original strand, 41516885 - 41516976
Alignment:
Q  139 gtttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||| ||||||||||||||||| |||||   |||| ||| ||| |||||||||| |||||| || | || || ||||||||||||||||||    
T  41516885 gtttggttccacttttggaggagtcaaaatccattctagaggtgtagaattgattatgacatcttggaatgttttcgagtagaattgatttt 41516976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 47307506 - 47307561
Alignment:
Q  49 attttacattcaactcacttttatataaaatcaattttacaaaaccaattcattca 104  Q
    |||||||||||||||||||||||  |||| ||||||||| |||| |||||||||||    
T  47307506 attttacattcaactcacttttaactaaagtcaattttataaaatcaattcattca 47307561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 22548249 - 22548187
Alignment:
Q  76 aaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaacatac 138  Q
    ||||||||||||||||| ||||||| | |||| |||||||| |||||| | ||||||||||||    
T  22548249 aaatcaattttacaaaatcaattcacttaaaatcaatttttatcaccgcaaaaccaaacatac 22548187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 213592 - 213524
Alignment:
Q  254 ttttgtttctacaattgatttttagcctcagatttattattcaacccacttttacatgaatgtatccaa 322  Q
    ||||| ||||| ||||||||||||  |||| |||| || |||||| |||||||||||||||| ||||||    
T  213592 ttttgattctagaattgatttttaaactcaaatttgttgttcaactcacttttacatgaatgcatccaa 213524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 4347052 - 4347136
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    |||||||||||||||||||||   |||||||||| ||||||| ||||||   ||||| ||||||||  ||||| | |||||||||    
T  4347052 tttacattcaactcacttttaaccaaaatcaattctacaaaatcaattctaccaaaatcaattttttccaccgcacaaccaaaca 4347136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 23052235 - 23052172
Alignment:
Q  254 ttttgtttctacaattgatttttagcctcagatttattattcaacccacttttacatgaatgtat 318  Q
    ||||| |||||| ||||||||| ||| | | ||||||||| ||||||||||||||||||||||||    
T  23052235 ttttgcttctactattgatttt-agcttaaaatttattatccaacccacttttacatgaatgtat 23052172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 138
Target Start/End: Complemental strand, 213232 - 213169
Alignment:
Q  75 aaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaacatac 138  Q
    ||||| ||||||| | || ||||| | |||||| ||||||||||||||| ||||||||||||||    
T  213232 aaaattaattttatagaatcaatttaatcaaaatcaatttttgtcaccgcagaaccaaacatac 213169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 215
Target Start/End: Original strand, 6744694 - 6744725
Alignment:
Q  184 agaattgattttgacatgtttggattttctcg 215  Q
    ||||||||||||||||||||||||||||||||    
T  6744694 agaattgattttgacatgtttggattttctcg 6744725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 15478188 - 15478121
Alignment:
Q  139 gtttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttgg 206  Q
    ||||| ||||||||||||||||| ||||  |||||  ||  ||| |||||||||||||||||||||||    
T  15478188 gtttggttccacttttggaggagccaaacttgattttagcggtgtagaattgattttgacatgtttgg 15478121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 36413755 - 36413846
Alignment:
Q  223 ttgattttaacttgaaaacagaattaggagtttttgtttctacaattgatttttagcctcagatttattattcaacccacttttacatgaat 314  Q
    |||||| |||||||||   |||||| | ||||||||  ||||| ||||||||||||||||| |||| || | |||||| |||||| ||||||    
T  36413755 ttgattctaacttgaagttagaatttgaagtttttggctctacgattgatttttagcctcaaatttgttgtccaacccgcttttatatgaat 36413846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 138
Target Start/End: Original strand, 47899371 - 47899450
Alignment:
Q  59 caactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaacatac 138  Q
    |||||||||||||   | |||||||||||||||| ||||||| |||||| ||||| ||||||  ||| ||| ||||||||    
T  47899371 caactcacttttagtaagaatcaattttacaaaatcaattcactcaaaatcaattcttgtcaaagtataacaaaacatac 47899450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 12655356 - 12655426
Alignment:
Q  53 tacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccg 123  Q
    |||||||||||| ||||||  |||||||||||| ||| || ||||||||  |||| | |||||||||||||    
T  12655356 tacattcaactcgcttttaagtaaaatcaatttcacataatcaattcatctaaaatctatttttgtcaccg 12655426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 13344851 - 13344913
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatt 113  Q
    ||||| |||||||||||||||   |||||||||| ||||||| ||||||| |||||| |||||    
T  13344851 tttacgttcaactcacttttaaccaaaatcaattctacaaaatcaattcaatcaaaatcaatt 13344913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 17759880 - 17759922
Alignment:
Q  184 agaattgattttgacatgtttggattttctcgagtagaattga 226  Q
    ||||||||||||||||||||| | | |||||||||||||||||    
T  17759880 agaattgattttgacatgtttcgttattctcgagtagaattga 17759922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 43541639 - 43541585
Alignment:
Q  81 aattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    ||||||||| || ||||||||||| || ||||||||||||||| | |||||||||    
T  43541639 aattttacagaatcaattcattcagaatcaatttttgtcaccgcataaccaaaca 43541585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 3515943 - 3516004
Alignment:
Q  77 aatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaacatac 138  Q
    ||||||||||||| || ||||||| |||||||||||| |  |||||| | ||||||||||||    
T  3515943 aatcaattttacataatcaattcactcaaaaccaattctaatcaccgcataaccaaacatac 3516004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 9939909 - 9939824
Alignment:
Q  145 ttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||||||||  ||||| ||||| |||||| ||| ||| | |||| |||||||||||||||| |  ||| ||||| ||||||||||    
T  9939909 ttccacttttctaggaggcaaaactgattctagaggtgtaaaattaattttgacatgtttggttcctctagagtataattgatttt 9939824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 26253091 - 26253026
Alignment:
Q  49 attttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaattt 114  Q
    ||||||| ||||||||| ||||| |   |||| |||||||| || |||||||||||||||||||||    
T  26253091 attttactttcaactcatttttaaaccgaatcgattttacagaatcaattcattcaaaaccaattt 26253026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 45557437 - 45557498
Alignment:
Q  77 aatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaacatac 138  Q
    ||||||||||||| || ||||| |||||||| ||||||||| ||| | | ||||||||||||    
T  45557437 aatcaattttacacaatcaatttattcaaaatcaatttttgccacagcataaccaaacatac 45557498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 1514385 - 1514441
Alignment:
Q  266 aattgatttttagcctcagatttattattcaacccacttttacatgaatgtatccaa 322  Q
    ||||||||||||  | || ||||||| |||||| || ||||||||||||||||||||    
T  1514385 aattgatttttacacacaaatttattgttcaactcatttttacatgaatgtatccaa 1514441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 6744830 - 6744890
Alignment:
Q  219 agaattgattttaacttgaaaacagaattaggagtttttgtttctacaattgatttttagc 279  Q
    |||||||||| || ||||||   |||||| | ||||||||| |||||||||||||||||||    
T  6744830 agaattgattatagcttgaagctagaatttgaagtttttgtctctacaattgatttttagc 6744890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 8381881 - 8381949
Alignment:
Q  138 cgtttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttgg 206  Q
    |||||| ||| |||| |||||||| ||||| |||||| ||| ||  | |||||||||||||||||||||    
T  8381881 cgtttggttcgacttctggaggagtcaaaattgattctagaggtataaaattgattttgacatgtttgg 8381949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 313
Target Start/End: Original strand, 24587949 - 24588001
Alignment:
Q  261 tctacaattgatttttagcctcagatttattattcaacccacttttacatgaa 313  Q
    |||| |||||||||| |  |||| |||||||||||||| ||||||||||||||    
T  24587949 tctataattgattttaacactcaaatttattattcaactcacttttacatgaa 24588001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 32088713 - 32088669
Alignment:
Q  186 aattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||||||||||||||||||| |  |||| |||||||||||||||    
T  32088713 aattgattttgacatgtttggttgctctcaagtagaattgatttt 32088669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 34875144 - 34875076
Alignment:
Q  254 ttttgtttctacaattgatttttagcctcagatttattattcaacccacttttacatgaatgtatccaa 322  Q
    ||||| ||| |||||||| |||| |  ||| ||||||| |||||||||||||| ||||||| |||||||    
T  34875144 ttttgcttcaacaattgaattttggtttcaaatttattgttcaacccacttttgcatgaatttatccaa 34875076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 38512430 - 38512494
Alignment:
Q  52 ttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaattttt 116  Q
    ||||||||||||||||| |||  | ||| |||||||||||| ||||||| | |||| ||||||||    
T  38512430 ttacattcaactcacttatatcaagaattaattttacaaaatcaattcacttaaaatcaattttt 38512494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 47322048 - 47322004
Alignment:
Q  184 agaattgattttgacatgtttggattttctcgagtagaattgatt 228  Q
    ||||||||||||||||||||| | | || ||||||||||||||||    
T  47322048 agaattgattttgacatgttttgttgttgtcgagtagaattgatt 47322004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 291
Target Start/End: Complemental strand, 10860103 - 10859856
Alignment:
Q  50 ttttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaacatac------gtttg 143  Q
    ||||||||||||||||| ||||   ||||||| ||||| | || ||||  |||||||| |||||||| || ||| | ||||||| | ||      |||||    
T  10860103 ttttacattcaactcacatttagccaaaatcagttttatagaatcaatatattcaaaatcaatttttatcgccgcacaaccaaaaagacatgtatgtttg 10860004  T
Q  144 tttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgattttaacttgaaaacag 243  Q
     ||||||||||||| ||| ||||| | |||  ||| ||| |||| |||||||||| |||||| || |||||| |||||||||||| |||||||||   ||    
T  10860003 gttccacttttggaagaggcaaaattcattatagaggtgtagaaatgattttgacctgtttgaatgttctcgggtagaattgattctaacttgaagctag 10859904  T
Q  244 aattaggagtttttgtttctacaattgatttttagcctcagatttatt 291  Q
    |||| |||| |||||  || ||| |||||||||| ||||| |||||||    
T  10859903 aatttggagcttttgcctcaacatttgatttttaacctcaaatttatt 10859856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 230
Target Start/End: Original strand, 29922798 - 29922883
Alignment:
Q  145 ttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    |||||||||| |||||| ||||| |||||| ||  ||| ||||||||||||||||||||||| | |||||||| ||||||||||||    
T  29922798 ttccactttttgaggagtcaaaattgattctagtagtgtagaattgattttgacatgtttggttgttctcgagcagaattgatttt 29922883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 139 - 228
Target Start/End: Complemental strand, 34250538 - 34250449
Alignment:
Q  139 gtttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgatt 228  Q
    ||||| ||||||||||| |||||  | || |||||| ||||||| ||||||| ||||||||||||||| || ||| ||||||||||||||    
T  34250538 gtttggttccacttttgaaggagttataattgattctagatgtgtagaattgtttttgacatgtttggtttctctagagtagaattgatt 34250449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 319
Target Start/End: Complemental strand, 12208870 - 12208823
Alignment:
Q  272 tttttagcctcagatttattattcaacccacttttacatgaatgtatc 319  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||    
T  12208870 tttttagcctcaaatttatttttcaacccacttttacatgaatgtatc 12208823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 15368141 - 15368204
Alignment:
Q  139 gtttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgt 202  Q
    ||||| ||||||||||||||||| ||||| |||||| |||| || |||||||||||||||||||    
T  15368141 gtttggttccacttttggaggagccaaaattgattctagatatgtagaattgattttgacatgt 15368204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 318
Target Start/End: Complemental strand, 3043185 - 3043012
Alignment:
Q  145 ttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgattttaacttgaaaacaga 244  Q
    |||||||| |||||||  ||||| |||||| ||| ||| ||||||||||||||||||||| | |  |   || ||||||||||| |||| ||||   |||    
T  3043185 ttccacttatggaggaatcaaaattgattctagaggtgtagaattgattttgacatgtttagttgcttaagaatagaattgattctaacatgaagctaga 3043086  T
Q  245 attaggagtttttgtttctacaattgatttttagcctcagatttattattcaacccacttttacatgaatgtat 318  Q
    | | ||||||||   ||||| ||||||||||||   ||| | ||||  ||||| ||||||||||||||||||||    
T  3043085 aattggagttttcaattctagaattgatttttatattcaaagttatggttcaaaccacttttacatgaatgtat 3043012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 2868397 - 2868313
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    |||||||||||||||||||||  ||||||||||| |||||||  |||||    |||| ||||||||||||| || ||||||||||    
T  2868397 tttacattcaactcacttttaactaaaatcaattctacaaaattaattctactaaaatcaatttttgtcactgtggaaccaaaca 2868313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 12208983 - 12208944
Alignment:
Q  186 aattgattttgacatgtttggattttctcgagtagaattg 225  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  12208983 aattgattttgacatgtttggatgttctcgagtagaattg 12208944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 40910964 - 40910881
Alignment:
Q  52 ttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    |||||||||||||||||||||  ||||| |||||||||||| || |||||| |||| |||||| ||| | |  |||||||||||    
T  40910964 ttacattcaactcacttttattcaaaataaattttacaaaatcacttcatttaaaatcaatttatgttagcaaagaaccaaaca 40910881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 38822392 - 38822274
Alignment:
Q  181 tgaagaattgattttgacatgtttggattttctcgagtagaattgattttaacttgaaaacagaattaggagtttttgtttctacaattgatttttagcc 280  Q
    ||||||||||||||| || | | || || ||| ||| ||||||||||| || ||||||   |||||| |||||||||   | ||||||||||||||| ||    
T  38822392 tgaagaattgattttaacgtatatgaatgttcccgattagaattgattctagcttgaatctagaatttggagtttttacctttacaattgatttttaacc 38822293  T
Q  281 tcagatttattattcaacc 299  Q
    ||| ||||||| |||||||    
T  38822292 tcaaatttattgttcaacc 38822274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 5465447 - 5465398
Alignment:
Q  49 attttacattcaactcacttttatataaaatcaattttacaaaaccaatt 98  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||| |||||    
T  5465447 atttttcattcaattcacttttatctaaaatcaattttacaaaatcaatt 5465398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 10373024 - 10373077
Alignment:
Q  83 ttttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaacat 136  Q
    ||||||||||  |||||||| |||| ||||||||||||| ||||||||||||||    
T  10373024 ttttacaaaattaattcatttaaaatcaatttttgtcacagtagaaccaaacat 10373077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 28973768 - 28973825
Alignment:
Q  151 ttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggat 208  Q
    ||||||||||| | ||| |||||| ||||||| |||||||||||||| ||||||||||    
T  28973768 ttttggaggagcctaaattgattctagatgtgtagaattgattttgatatgtttggat 28973825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 14299436 - 14299492
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaa 107  Q
    ||||| |||||||||||||||| || ||||||||||||| || ||||||| ||||||    
T  14299436 tttaccttcaactcacttttatctagaatcaattttacacaatcaattcactcaaaa 14299492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 38045394 - 38045438
Alignment:
Q  186 aattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    |||||||||||||||||||| || ||||| |||||||||||||||    
T  38045394 aattgattttgacatgtttgaatgttctcaagtagaattgatttt 38045438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 135
Target Start/End: Complemental strand, 7328603 - 7328524
Alignment:
Q  56 attcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    |||||||||| ||||||  | |||||| |||||| || ||||||||| |||| || |||||||||| | |||||||||||    
T  7328603 attcaactcaattttatgcataatcaactttacagaatcaattcatttaaaatcagtttttgtcactgcagaaccaaaca 7328524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 224
Target Start/End: Original strand, 11134290 - 11134321
Alignment:
Q  193 tttgacatgtttggattttctcgagtagaatt 224  Q
    ||||||||||||||||||||||||||||||||    
T  11134290 tttgacatgtttggattttctcgagtagaatt 11134321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 14067095 - 14067032
Alignment:
Q  44 aaactattttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaa 107  Q
    ||||||||||||||| ||||||||||||   ||||||||||||||  ||||| |||||| ||||    
T  14067095 aaactattttacatttaactcacttttaatcaaaatcaattttacctaaccatttcattaaaaa 14067032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 281
Target Start/End: Complemental strand, 18977408 - 18977377
Alignment:
Q  250 gagtttttgtttctacaattgatttttagcct 281  Q
    ||||||||||||||||||||||||||||||||    
T  18977408 gagtttttgtttctacaattgatttttagcct 18977377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 10161749 - 10161811
Alignment:
Q  164 aaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattga 226  Q
    |||| |||||| ||||||| ||||||||| ||||||||||||  | ||||||| |||||||||    
T  10161749 aaaattgattctagatgtgtagaattgatcttgacatgtttgattgttctcgaatagaattga 10161811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 10898629 - 10898711
Alignment:
Q  148 cacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    |||||||||||||  ||||| |||||| |||  ||  ||||| |||||||||||||||| |  ||||||||| ||||||||||    
T  10898629 cacttttggaggaatcaaaattgattctagagctgtcgaattaattttgacatgtttggttgctctcgagtaaaattgatttt 10898711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 14671137 - 14671203
Alignment:
Q  54 acattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtca 120  Q
    |||||||| |||||||||   | ||||||||| |||||| |||||||||||||| || |||||||||    
T  14671137 acattcaattcacttttagccataatcaatttcacaaaatcaattcattcaaaatcattttttgtca 14671203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 322
Target Start/End: Original strand, 1102096 - 1102232
Alignment:
Q  186 aattgattttgacatgtttggattttctcgagtagaattgattttaacttgaaaacagaattaggagtttttg-tttctacaattgatttttagcctcag 284  Q
    ||||||||||||| ||||| | | ||||  |||||||||||||||||||||||   || ||| | || |||||  ||||| ||||| ||| ||||||       
T  1102096 aattgattttgacgtgtttaggtgttctgaagtagaattgattttaacttgaagctaggatttgtagcttttgacttctataattg-tttatagccttga 1102194  T
Q  285 atttattattcaacccacttttacatgaatgtatccaa 322  Q
    ||||| | |||||||||||||| ||| |||||||||||    
T  1102195 atttaatgttcaacccacttttgcataaatgtatccaa 1102232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 1105367 - 1105428
Alignment:
Q  169 tgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    |||||| ||| ||| | ||||||||||||||| ||||| | ||||| |||||||||||||||    
T  1105367 tgattctagaggtgtataattgattttgacatttttggctgttctcaagtagaattgatttt 1105428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 6988228 - 6988277
Alignment:
Q  49 attttacattcaactcacttttatataaaatcaattttacaaaaccaatt 98  Q
    |||||| |||||||| |||||||  ||||||||||||||||||| |||||    
T  6988228 attttaaattcaacttacttttaattaaaatcaattttacaaaatcaatt 6988277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 29923013 - 29923066
Alignment:
Q  54 acattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaa 107  Q
    ||||||||||||||| ||   ||||||||||||||| || ||||||||||||||    
T  29923013 acattcaactcacttatagtcaaaatcaattttacataatcaattcattcaaaa 29923066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 138
Target Start/End: Original strand, 35108355 - 35108436
Alignment:
Q  57 ttcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaacatac 138  Q
    ||||||| | |||||| |||||||||||||||| ||  |||||| ||||||  ||||||| ||| || | ||||||||||||    
T  35108355 ttcaactaatttttatttaaaatcaattttacagaattaattcactcaaaataaatttttttcatcgcaaaaccaaacatac 35108436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 43438639 - 43438590
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaattttacaaaaccaattca 100  Q
    |||||||| ||||||||||||| ||||| |||||||||| || |||||||    
T  43438639 tttacatttaactcacttttatctaaaaacaattttacataatcaattca 43438590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 1145039 - 1145075
Alignment:
Q  57 ttcaactcacttttatataaaatcaattttacaaaac 93  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  1145039 ttcaactcacttttaaataaaatcaattctacaaaac 1145075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 6414251 - 6414311
Alignment:
Q  75 aaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    ||||| |||||||||||| ||||||||||||||  | ||||| ||| |||| |||||||||    
T  6414251 aaaattaattttacaaaatcaattcattcaaaaatattttttatcaacgtaaaaccaaaca 6414311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 8591704 - 8591748
Alignment:
Q  94 caattcattcaaaaccaatttttgtcaccgtagaaccaaacatac 138  Q
    ||||||| |||||| |||| |||||||||| ||||||||||||||    
T  8591704 caattcactcaaaatcaatatttgtcaccgcagaaccaaacatac 8591748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 266 - 310
Target Start/End: Complemental strand, 10860140 - 10860096
Alignment:
Q  266 aattgatttttagcctcagatttattattcaacccacttttacat 310  Q
    ||||||||||||||||||  |||||| |||||| |||||||||||    
T  10860140 aattgatttttagcctcaactttattgttcaactcacttttacat 10860096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 10860499 - 10860451
Alignment:
Q  182 gaagaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||||||||||||||||||||||| |||| | || || ||||||||||    
T  10860499 gaagaattgattttgacatgtttggtttttattgaatataattgatttt 10860451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 13224758 - 13224715
Alignment:
Q  186 aattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||||    
T  13224758 aattgattttgacatgtttggatgttc-cgagtataattgatttt 13224715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 17862468 - 17862520
Alignment:
Q  186 aattgattttgacatgtttggattttctcgagtagaattgattttaacttgaa 238  Q
    |||| ||||| |||| |||| || ||||| |||||||||||||||||||||||    
T  17862468 aattaattttaacatatttgaatgttctcaagtagaattgattttaacttgaa 17862520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 322
Target Start/End: Original strand, 37877084 - 37877156
Alignment:
Q  250 gagtttttgtttctacaattgatttttagcctcagatttattattcaacccacttttacatgaatgtatccaa 322  Q
    ||||||||| | ||| |||  ||||||||||||| ||||||| || ||| |||||||| ||||||| ||||||    
T  37877084 gagtttttgctcctagaatgaatttttagcctcaaatttattgtttaactcacttttatatgaatgaatccaa 37877156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 45369068 - 45369151
Alignment:
Q  147 ccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||||||| ||||||||||| ||||| |||| ||| ||| |||||||||| |||||||||| ||||| |||||||||||||||    
T  45369068 ccacttttgaaggagacaaaattgatttcagaggtgtagatttgattttgagatgtttggatgttctcaagtagaattgatttt 45369151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 40491688 - 40491774
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaacata 137  Q
    ||||| |||||||||||||||   ||||||||||||||| || ||||||| |||||| ||||| ||||||||| |||||||||||||    
T  40491688 tttaccttcaactcacttttagtcaaaatcaattttacagaatcaattcactcaaaatcaattcttgtcaccgcagaaccaaacata 40491774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 139 - 316
Target Start/End: Complemental strand, 38123835 - 38123659
Alignment:
Q  139 gtttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgattttaacttgaa 238  Q
    ||||| ||||||||||||||||| ||||| |||||| |||  || |||||||||||| |||||||||| |  | |  ||||||||||||| | |||||||    
T  38123835 gtttggttccacttttggaggagccaaaattgattctagagatgtagaattgattttaacatgtttggttcctataaagtagaattgattct-acttgaa 38123737  T
Q  239 aacagaattaggagtttttgtttctacaattgatttttagcctcagatttattattcaacccacttttacatgaatgt 316  Q
       |||| | | || || |  ||||| ||||||||||||  |||| |||||||  ||||| |||||||||||||||||    
T  38123736 gctagaaattgtagcttctaattctagaattgatttttacactcaaatttattggtcaactcacttttacatgaatgt 38123659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 230
Target Start/End: Original strand, 15050191 - 15050281
Alignment:
Q  139 gtttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||| ||||||||| ||||||| ||||| |||||| ||| ||||||||||||||||||| ||||||| |  ||||  ||||||||||||||    
T  15050191 gtttggttccacttt-ggaggagccaaaattgattctagaagtgaagaattgattttgacctgtttggttactctcatgtagaattgatttt 15050281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 35812411 - 35812474
Alignment:
Q  44 aaactattttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaa 107  Q
    |||||||||||||||||||| | |||| |  |||||||||||||||||| ||||||||||||||    
T  35812411 aaactattttacattcaactaattttttttcaaaatcaattttacaaaatcaattcattcaaaa 35812474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 138
Target Start/End: Complemental strand, 42481867 - 42481778
Alignment:
Q  49 attttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaacatac 138  Q
    |||||||||||||||||||||| |  | ||||||||||||| || ||||||| | |||| ||||| || |||||| || | |||||||||    
T  42481867 attttacattcaactcactttttttcagaatcaattttacataatcaattcacttaaaatcaattcttttcaccgcaggagcaaacatac 42481778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 45004907 - 45004974
Alignment:
Q  163 caaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||| |||||| ||| ||| ||||||||||||||||||||||| |  |||| |||| ||||||||||    
T  45004907 caaaattgattctagaggtgtagaattgattttgacatgtttggttactctctagtataattgatttt 45004974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 230
Target Start/End: Original strand, 48290289 - 48290380
Alignment:
Q  139 gtttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||| || ||||||||||||| |||||| ||||| || | ||    ||||||||||||||||||||||| || || || ||||||||||||    
T  48290289 gtttgatttcacttttggaggatacaaaattgatttcataggttggaaattgattttgacatgtttggatgttttcaagcagaattgatttt 48290380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 12306677 - 12306723
Alignment:
Q  184 agaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||||||||||||||||||||| |  |||| |||||||||||||||    
T  12306677 agaattgattttgacatgtttggttgctctcaagtagaattgatttt 12306723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 21436140 - 21436095
Alignment:
Q  186 aattgattttgacatgtttggattttctcgagtagaattgatttta 231  Q
    |||||||||||||||||||  || ||||||||||||||| ||||||    
T  21436140 aattgattttgacatgttttaatgttctcgagtagaatttatttta 21436095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 322
Target Start/End: Original strand, 27571887 - 27571960
Alignment:
Q  249 ggagtttttgtttctacaattgatttttagcctcagatttattattcaacccacttttacatgaatgtatccaa 322  Q
    |||| ||||| ||||| |||||||||| |  ||||  ||||||||||||| ||| ||||||| |||||||||||    
T  27571887 ggagcttttgattctagaattgattttaacactcaagtttattattcaactcacatttacataaatgtatccaa 27571960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 28070813 - 28070894
Alignment:
Q  54 acattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    |||||||||||| ||| |  | |||||||||||||||||  |||| |||||||| |||| || ||||||| | |||||||||    
T  28070813 acattcaactcaatttcagttgaaatcaattttacaaaattaattaattcaaaatcaatattcgtcaccgcataaccaaaca 28070894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 34536755 - 34536812
Alignment:
Q  58 tcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttt 115  Q
    |||||||||||||||  ||||| ||||||| | || |||||||||||||| |||||||    
T  34536755 tcaactcacttttattcaaaattaattttatataatcaattcattcaaaatcaatttt 34536812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 45823310 - 45823355
Alignment:
Q  94 caattcattcaaaaccaatttttgtcaccgtagaaccaaacatacg 139  Q
    ||||||| |||||| ||||||||||||||||  |||||||||||||    
T  45823310 caattcaatcaaaatcaatttttgtcaccgtgtaaccaaacatacg 45823355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 48158836 - 48158885
Alignment:
Q  186 aattgattttgacatgtttggattttctcgagtagaattgattttaactt 235  Q
    ||||||||||||||||||||| |  ||||||||| |||||||| ||||||    
T  48158836 aattgattttgacatgtttggttgctctcgagtaaaattgattataactt 48158885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 12306922 - 12306966
Alignment:
Q  186 aattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||||||||||||||||||| |  ||| ||||||||||||||||    
T  12306922 aattgattttgacatgtttggttgctcttgagtagaattgatttt 12306966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 36021314 - 36021258
Alignment:
Q  79 tcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    ||||||||  |||| ||||| | |||||| |||||||||||||| ||||||||||||    
T  36021314 tcaattttgtaaaatcaatttagtcaaaatcaatttttgtcaccctagaaccaaaca 36021258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 40796032 - 40795976
Alignment:
Q  266 aattgatttttagcctcagatttattattcaacccacttttacatgaatgtatccaa 322  Q
    |||||||||| |  |||| ||||| |||||||  |||||||||||||||||||||||    
T  40796032 aattgattttaacactcaaatttactattcaaatcacttttacatgaatgtatccaa 40795976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 45004965 - 45005009
Alignment:
Q  186 aattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||||||||||||||||||| |  |||||| |||||||||||||    
T  45004965 aattgattttgacatgtttggttgctctcgaatagaattgatttt 45005009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 8e-18; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 48575487 - 48575561
Alignment:
Q  44 aaactattttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgt 118  Q
    |||| ||||||||||||||||| ||||||  |||||||||||||||||| ||||||||||||||  |||||||||    
T  48575487 aaaccattttacattcaactcatttttatcaaaaatcaattttacaaaatcaattcattcaaaattaatttttgt 48575561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 135
Target Start/End: Complemental strand, 24364169 - 24364083
Alignment:
Q  49 attttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    ||||||||||||| |||||||||   | ||||||||||||| || |||||||||||||| |||||||||||| | || |||||||||    
T  24364169 attttacattcaaatcacttttagtgagaatcaattttacataatcaattcattcaaaatcaatttttgtcatcataaaaccaaaca 24364083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 38740343 - 38740287
Alignment:
Q  57 ttcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatt 113  Q
    ||||||||||||||||  |||||||||||||||||| |||||||||||||| |||||    
T  38740343 ttcaactcacttttatccaaaatcaattttacaaaatcaattcattcaaaatcaatt 38740287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 1099742 - 1099825
Alignment:
Q  147 ccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||||||||||||||||||| |||||| |||  || |||||||||||||| || ||||| |  ||||||| ||||||||||||    
T  1099742 ccacttttggaggagacaaaattgattctagagatgcagaattgattttgaaatatttggttgctctcgagcagaattgatttt 1099825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 43868246 - 43868328
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaa 133  Q
    ||||| ||||||| |||||||  || ||| |||||||||||| |||||||||||||| |||||||| | ||| ||||||||||    
T  43868246 tttactttcaacttacttttaactagaattaattttacaaaatcaattcattcaaaatcaatttttataaccatagaaccaaa 43868328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 135
Target Start/End: Original strand, 5025575 - 5025652
Alignment:
Q  58 tcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    ||||||||||| ||  ||||||||||| ||||||| ||||||| |||||| ||||||| ||||||| | |||||||||    
T  5025575 tcaactcacttctaactaaaatcaattctacaaaatcaattcaatcaaaatcaattttagtcaccgcataaccaaaca 5025652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 77 - 121
Target Start/End: Complemental strand, 12926966 - 12926922
Alignment:
Q  77 aatcaattttacaaaaccaattcattcaaaaccaatttttgtcac 121  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||    
T  12926966 aatcaattttataaaaccaattcattcaaaatcaatttttgtcac 12926922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 17897853 - 17897799
Alignment:
Q  81 aattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    ||||| |||||| ||||||| |||||| ||||||||||||||| |||||||||||    
T  17897853 aatttgacaaaatcaattcactcaaaatcaatttttgtcaccgcagaaccaaaca 17897799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 25318990 - 25319036
Alignment:
Q  184 agaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||||    
T  25318990 agaattgattttgacatgtttggttgctctcgagtagaattgatttt 25319036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 136
Target Start/End: Complemental strand, 33560545 - 33560461
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaacat 136  Q
    ||||||||||||||||||| | |  ||||| ||||||| |||  ||||||||||||| || ||||||||||| |||||| ||||||    
T  33560545 tttacattcaactcactttca-agcaaatccattttacgaaattaattcattcaaaatcattttttgtcaccttagaactaaacat 33560461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 29728947 - 29728999
Alignment:
Q  186 aattgattttgacatgtttggattttctcgagtagaattgattttaacttgaa 238  Q
    |||||||||||||| |||||| |  |||||||||||||||||| |||||||||    
T  29728947 aattgattttgacaagtttggttgctctcgagtagaattgattataacttgaa 29728999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 472025 - 471962
Alignment:
Q  169 tgattccagatgtgaagaattgatttt-gacatgtttggattttctcgagtagaattgatttta 231  Q
    |||||| ||| ||| |||||||||||| |||||||||| || || |||||||||||||||||||    
T  472025 tgattctagaagtgtagaattgatttttgacatgtttgaatgttgtcgagtagaattgatttta 471962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 33560710 - 33560667
Alignment:
Q  187 attgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    |||||||||||||||||||| |  ||||||||||||||||||||    
T  33560710 attgattttgacatgtttggttgctctcgagtagaattgatttt 33560667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 230
Target Start/End: Original strand, 41058824 - 41058915
Alignment:
Q  139 gtttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||| |||||||||| || ||| | ||| |||||| | | | | |||||||||| |||||||||||||| || ||||||| ||||||||||    
T  41058824 gtttggttccacttttagatgagcctaaattgattctaaaggagtagaattgattgtgacatgtttggatgttttcgagtaaaattgatttt 41058915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 2171706 - 2171772
Alignment:
Q  160 agacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattga 226  Q
    |||||||| |||||| |||  || ||||||  ||||||||||||||||| |||||||||| ||||||    
T  2171706 agacaaaattgattctagagttgtagaatttcttttgacatgtttggatgttctcgagtaaaattga 2171772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 308
Target Start/End: Original strand, 4451496 - 4451542
Alignment:
Q  262 ctacaattgatttttagcctcagatttattattcaacccacttttac 308  Q
    |||||| ||||||||||||||| ||||||| || |||||||||||||    
T  4451496 ctacaaatgatttttagcctcaaatttattgtttaacccacttttac 4451542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 12224465 - 12224519
Alignment:
Q  48 tattttacattcaactcacttttatataaaatcaattttacaaaaccaattcatt 102  Q
    |||||| ||||||||| |||||||  |||||| |||||||||||| |||||||||    
T  12224465 tattttgcattcaacttacttttaactaaaataaattttacaaaatcaattcatt 12224519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 216
Target Start/End: Original strand, 43075972 - 43076038
Alignment:
Q  150 cttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcga 216  Q
    |||||||||||| ||||| |||||| ||| ||| |||||||||||| |||| |||| || |||||||    
T  43075972 cttttggaggaggcaaaattgattctagaggtgcagaattgattttaacatatttgaatgttctcga 43076038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 322
Target Start/End: Original strand, 4243412 - 4243485
Alignment:
Q  249 ggagtttttgtttctacaattgatttttagcctcagatttattattcaacccacttttacatgaatgtatccaa 322  Q
    |||| ||||| ||||| ||||||||||||  |||| ||||||| ||| || ||||||||||| ||||| |||||    
T  4243412 ggagcttttgattctagaattgatttttacactcaaatttattgttctactcacttttacatcaatgtctccaa 4243485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 135
Target Start/End: Original strand, 21592545 - 21592622
Alignment:
Q  58 tcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    ||||||||||||||  |  ||||||| ||| |||| |||||||||||||| ||| |||||| |||| | |||||||||    
T  21592545 tcaactcacttttagttggaatcaatcttataaaatcaattcattcaaaatcaaattttgttaccgcaaaaccaaaca 21592622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 24338547 - 24338584
Alignment:
Q  187 attgattttgacatgtttggattttctcgagtagaatt 224  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  24338547 attgattttgacatgtttggatgttctcgagtaaaatt 24338584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 24370578 - 24370623
Alignment:
Q  77 aatcaattttacaaaaccaattcattcaaaaccaatttttgtcacc 122  Q
    |||||||||||||||| ||||| |||||||| ||| ||||||||||    
T  24370578 aatcaattttacaaaatcaattaattcaaaatcaacttttgtcacc 24370623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 26617806 - 26617745
Alignment:
Q  147 ccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggat 208  Q
    ||||||||||| | |  |||| |||||| ||||||| | |||||||||||||||||||||||    
T  26617806 ccacttttggatgtgctaaaattgattctagatgtgtaaaattgattttgacatgtttggat 26617745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 34943436 - 34943485
Alignment:
Q  49 attttacattcaactcacttttatataaaatcaattttacaaaaccaatt 98  Q
    ||||||||||||||||| |||||| |||||| ||||||| |||| |||||    
T  34943436 attttacattcaactcaattttatctaaaattaattttataaaatcaatt 34943485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 238
Target Start/End: Complemental strand, 46012774 - 46012681
Alignment:
Q  145 ttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgattttaacttgaa 238  Q
    ||||||||||| ||||| ||||| |||||  ||||||| |||| | ||||   ||| |||| || ||||| ||||||||||||| |||||||||    
T  46012774 ttccacttttgaaggagtcaaaattgatttaagatgtgtagaactaatttccgcatatttgaatattctcaagtagaattgattctaacttgaa 46012681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 47509918 - 47509857
Alignment:
Q  74 taaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    |||||||||||||||||||  ||||| || ||||||||||||| |||||  | |||||||||    
T  47509918 taaaatcaattttacaaaattaattcttttaaaaccaatttttatcacctcaaaaccaaaca 47509857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 50358195 - 50358134
Alignment:
Q  145 ttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttgg 206  Q
    |||||||| ||| ||||| |||| |||||| ||| ||| |||||||||||||||||| ||||    
T  50358195 ttccacttctggtggagaaaaaattgattctagaggtgtagaattgattttgacatgcttgg 50358134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 8283335 - 8283275
Alignment:
Q  76 aaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaacat 136  Q
    |||||||||||| |||  |||||||||||||| ||||||| ||||||| | || |||||||    
T  8283335 aaatcaattttaaaaactcaattcattcaaaatcaattttggtcaccgcacaatcaaacat 8283275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 10185224 - 10185292
Alignment:
Q  254 ttttgtttctacaattgatttttagcctcagatttattattcaacccacttttacatgaatgtatccaa 322  Q
    ||||| ||||| ||||||| ||||  |||| ||||||| || ||| ||||||||||| |||||||||||    
T  10185224 ttttgattctaaaattgatctttacactcaaatttattgtttaactcacttttacattaatgtatccaa 10185292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 23335305 - 23335265
Alignment:
Q  81 aattttacaaaaccaattcattcaaaaccaatttttgtcac 121  Q
    |||||||||||| || ||||||||||| |||||||||||||    
T  23335305 aattttacaaaatcatttcattcaaaatcaatttttgtcac 23335265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 138
Target Start/End: Complemental strand, 53159011 - 53158947
Alignment:
Q  75 aaaatcaattttacaaaaccaattcattcaaaaccaa-tttttgtcaccgtagaaccaaacatac 138  Q
    |||||||||||||||  | ||||||| |||||| ||| |||||||||||| | ||||||||||||    
T  53159011 aaaatcaattttacatgatcaattcactcaaaatcaactttttgtcaccgcaaaaccaaacatac 53158947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 6948534 - 6948445
Alignment:
Q  48 tattttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaacata 137  Q
    |||||||| ||||||||| ||| |   ||||||||||||||| ||||||||||||||||| ||| | ||||| |||||||||||||||||    
T  6948534 tattttaccttcaactcaatttcaatcaaaatcaattttacataaccaattcattcaaaatcaactattgtctccgtagaaccaaacata 6948445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 43717237 - 43717309
Alignment:
Q  136 tacgtttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggat 208  Q
    |||||||| || |||||||||||| |  |||| |||||| ||||||| |||||||||||||||||||||||||    
T  43717237 tacgtttggtttcacttttggaggtgttaaaattgattctagatgtgtagaattgattttgacatgtttggat 43717309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 11759834 - 11759747
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaacatac 138  Q
    ||||| |||||||||||||||   |||||||||||||||||| ||||||| |||||  |||||||| |||||  | ||||||||||||    
T  11759834 tttaccttcaactcacttttaatcaaaatcaattttacaaaatcaattcactcaaactcaatttttttcacctcataaccaaacatac 11759747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 37420378 - 37420293
Alignment:
Q  145 ttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||||||||||| |||   ||| |||||| ||| ||| ||||||||||||||||||||||| ||  || ||||||||||||||||    
T  37420378 ttccacttttggaagagtgcaaattgattctagaggtgtagaattgattttgacatgtttggcttccctagagtagaattgatttt 37420293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 12110937 - 12111021
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    |||| ||||||||||||||||   ||||||||||| |||||| ||||||  |||||| ||||||| ||||||| | |||||||||    
T  12110937 tttatattcaactcacttttaaccaaaatcaatttgacaaaatcaattctatcaaaatcaattttcgtcaccgcacaaccaaaca 12111021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 7629760 - 7629827
Alignment:
Q  139 gtttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttgg 206  Q
    ||||| ||||||||||||||||| ||| | |||||| ||| ||| ||||||||||||| |||||||||    
T  7629760 gtttggttccacttttggaggagccaagattgattctagaggtgtagaattgattttgtcatgtttgg 7629827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 317
Target Start/End: Original strand, 11510972 - 11511046
Alignment:
Q  242 agaattaggagtttttgtttctacaattgatttttagcctcagatttattattcaacccacttttacatgaatgta 317  Q
    |||||| ||||||||||  ||||||||| ||||| | ||||| ||||||| ||||||||||||||| |||||||||    
T  11510972 agaatttggagtttttgcctctacaatttattttaa-cctcaaatttattgttcaacccacttttatatgaatgta 11511046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 138
Target Start/End: Complemental strand, 37745861 - 37745786
Alignment:
Q  63 tcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaacatac 138  Q
    ||||||||| | ||||||||||||||| || ||||||| |||||| ||||| || |||||| | ||||||||||||    
T  37745861 tcacttttagacaaaatcaattttacataatcaattcactcaaaatcaattattatcaccgcaaaaccaaacatac 37745786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 4908826 - 4908888
Alignment:
Q  260 ttctacaattgatttttagcctcagatttattattcaacccacttttacatgaatgtatccaa 322  Q
    |||||||||||||||| ||||| |  |||||| ||||| ||||||| ||||||||||||||||    
T  4908826 ttctacaattgattttcagccttaactttattgttcaatccactttaacatgaatgtatccaa 4908888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 22447527 - 22447585
Alignment:
Q  74 taaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaa 132  Q
    ||||||||||||||| ||| |||||||||||| | ||| |||||||||||||| |||||    
T  22447527 taaaatcaattttacgaaagcaattcattcaatatcaaattttgtcaccgtagtaccaa 22447585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 28206720 - 28206770
Alignment:
Q  267 attgatttttagcctcagatttattattcaacccacttttacatgaatgta 317  Q
    |||||||||||| |||| ||||||||||||||  |||||||||||||||||    
T  28206720 attgatttttagtctcaaatttattattcaacaaacttttacatgaatgta 28206770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 314
Target Start/End: Original strand, 37541333 - 37541387
Alignment:
Q  260 ttctacaattgatttttagcctcagatttattattcaacccacttttacatgaat 314  Q
    |||||||||||||||||||||||| ||||||| || |||  ||||||||||||||    
T  37541333 ttctacaattgatttttagcctcaaatttattgtttaacttacttttacatgaat 37541387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 7630538 - 7630583
Alignment:
Q  74 taaaatcaattttacaaaaccaattcattcaaaaccaatttttgtc 119  Q
    ||||||||||||||||||| |||||||||||||| |||| ||||||    
T  7630538 taaaatcaattttacaaaatcaattcattcaaaatcaatgtttgtc 7630583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 134
Target Start/End: Original strand, 17220417 - 17220502
Alignment:
Q  49 attttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaac 134  Q
    |||||||||| || |||| ||||  |||| ||||||||||||||| |||||| |||||| ||||||| | |||  |||||||||||    
T  17220417 attttacattaaaatcacatttaactaaagtcaattttacaaaactaattcaatcaaaatcaattttagccactatagaaccaaac 17220502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 40582653 - 40582714
Alignment:
Q  145 ttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttgg 206  Q
    ||||||||||||| ||| ||||| |||||| ||| ||| |||||||||||| ||||||||||    
T  40582653 ttccacttttggaagagccaaaattgattctagaggtgtagaattgattttaacatgtttgg 40582714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 1977050 - 1976986
Alignment:
Q  141 ttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttg 205  Q
    ||||||||||||||||||||| ||||| |||||| ||| ||    ||||||||||||||||||||    
T  1977050 ttgtttccacttttggaggagccaaaattgattctagaggtttgaaattgattttgacatgtttg 1976986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 318
Target Start/End: Original strand, 6767673 - 6767769
Alignment:
Q  222 attgattttaacttgaaaacagaattaggagtttttgtttctacaattgatttttagcctcagatttattattcaacccacttttacatgaatgtat 318  Q
    ||||||| |||||||||   |||||| |||| ||||| |||||||||||| ||||||| ||| |||| || || ||||| || ||||||| ||||||    
T  6767673 attgattctaacttgaagctagaatttggagcttttgcttctacaattgaattttagcttcaaatttgttgtttaaccctctcttacatggatgtat 6767769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 39702580 - 39702528
Alignment:
Q  178 atgtgaagaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||| |||||  ||||||||||||||| || |||||||||||||||||||||    
T  39702580 atgtgtagaataaattttgacatgtttgtatgttctcgagtagaattgatttt 39702528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 3602499 - 3602420
Alignment:
Q  57 ttcaactcacttttatataaaatcaatttta-caaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    ||||||||||||||| | |||||||||| || ||||| ||||||| | |||| |||||||  |||||| |||||||||||    
T  3602499 ttcaactcacttttagacaaaatcaattctatcaaaatcaattcagtaaaaatcaattttcatcaccgcagaaccaaaca 3602420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 277
Target Start/End: Original strand, 6925652 - 6925743
Alignment:
Q  186 aattgattttgacatgtttggattttctcgagtagaattgattttaacttgaaaacagaattaggagtttttgtttctacaattgattttta 277  Q
    |||| ||||||||||||||| || |||| |||||||||||||| | |||||||   |||||| |||| ||||  ||| || |||||||||||    
T  6925652 aattaattttgacatgtttgtatattcttgagtagaattgattcttacttgaagttagaatttggagattttagttcaacgattgattttta 6925743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 16519350 - 16519433
Alignment:
Q  145 ttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctc-gagtagaattgat 227  Q
    ||||||||||||||||  ||||| |||||| ||| ||| ||||||||||||   ||||||||| ||| || |||||||||||||    
T  16519350 ttccacttttggaggaagcaaaattgattctagaggtgtagaattgattttattatgtttggaatttatctgagtagaattgat 16519433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 312
Target Start/End: Complemental strand, 33962041 - 33961978
Alignment:
Q  249 ggagtttttgtttctacaattgatttttagcctcagatttattattcaacccacttttacatga 312  Q
    |||||||||| ||||| ||||||||||||| |||| ||||||| |||||  || ||||||||||    
T  33962041 ggagtttttgattctataattgatttttagactcaaatttattgttcaagtcatttttacatga 33961978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 36307075 - 36307142
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgt 118  Q
    ||||| ||||||||||||||||  | ||||||||||||| || ||||||| |||| | ||||||||||    
T  36307075 tttacgttcaactcacttttatccataatcaattttacataatcaattcactcaagatcaatttttgt 36307142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 310
Target Start/End: Original strand, 44439249 - 44439340
Alignment:
Q  219 agaattgattttaacttgaaaacagaattaggagtttttgtttctacaattgatttttagcctcagatttattattcaacccacttttacat 310  Q
    |||||||||| |||||||||   | |||| |||| ||||| ||||| |||||||||| |  |||| ||||||| |||||| |||||||||||    
T  44439249 agaattgattctaacttgaagctaaaatttggagcttttgattctaaaattgattttaacactcaaatttattgttcaactcacttttacat 44439340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 116
Target Start/End: Complemental strand, 45000477 - 45000418
Alignment:
Q  57 ttcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaattttt 116  Q
    |||||||||||||||  |||||||||||||||| || ||||| |||||||| ||| ||||    
T  45000477 ttcaactcacttttaggtaaaatcaattttacataatcaatttattcaaaatcaaatttt 45000418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 11510896 - 11510942
Alignment:
Q  184 agaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||||| |||||| |||||||||| || ||||||||||||||||||    
T  11510896 agaattggttttgatatgtttggatgttttcgagtagaattgatttt 11510942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 319
Target Start/End: Original strand, 16519489 - 16519539
Alignment:
Q  269 tgatttttagcctcagatttattattcaacccacttttacatgaatgtatc 319  Q
    |||| |||||||||| ||||||| ||||||||| |||| ||||||||||||    
T  16519489 tgatctttagcctcaaatttattgttcaacccaattttgcatgaatgtatc 16519539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 36987254 - 36987208
Alignment:
Q  184 agaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    |||||||||||||||||||||||||| | | ||||| ||||||||||    
T  36987254 agaattgattttgacatgtttggattcttttgagtataattgatttt 36987208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 38129482 - 38129404
Alignment:
Q  57 ttcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    |||| ||||||||||  || |||| |||||||| || |||||||||||||| ||||||||||| |   |||||||||||    
T  38129482 ttcatctcacttttagttagaatccattttacagaatcaattcattcaaaatcaatttttgtcgcaacagaaccaaaca 38129404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 3654824 - 3654787
Alignment:
Q  54 acattcaactcacttttatataaaatcaattttacaaa 91  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  3654824 acattcaactcacttttaactaaaatcaattttacaaa 3654787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 319
Target Start/End: Complemental strand, 4894212 - 4894147
Alignment:
Q  254 ttttgtttctacaattgatttttagcctcagatttattattcaacccacttttacatgaatgtatc 319  Q
    ||||| ||||| |||||||| |||  |||| |||||||||||||  |||||||| |||||||||||    
T  4894212 ttttgattctataattgattattatactcaaatttattattcaagtcacttttaaatgaatgtatc 4894147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 4908737 - 4908778
Alignment:
Q  189 tgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||||||||||||||| || || ||||||||||||||||||    
T  4908737 tgattttgacatgtttgtatgttttcgagtagaattgatttt 4908778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 1763283 - 1763367
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    |||| |||||||||| |||||   |||||||||||||||||| |||||   |||||| ||||| | ||||||| | |||||||||    
T  1763283 tttaaattcaactcaattttaaccaaaatcaattttacaaaatcaattttatcaaaatcaattctcgtcaccgcacaaccaaaca 1763367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 15928576 - 15928532
Alignment:
Q  184 agaattgattttgacatgtttggattttctcgagtagaattgatt 228  Q
    ||||||||||||||||||||||| | || | ||||||||||||||    
T  15928576 agaattgattttgacatgtttggttgttgttgagtagaattgatt 15928532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 37649655 - 37649595
Alignment:
Q  145 ttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttg 205  Q
    ||||||||||||||||| ||||| ||||||  || ||   |||||||||||||||||||||    
T  37649655 ttccacttttggaggagtcaaaattgattcttgaggtatggaattgattttgacatgtttg 37649595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 42982586 - 42982642
Alignment:
Q  266 aattgatttttagcctcagatttattattcaacccacttttacatgaatgtatccaa 322  Q
    ||||||||||||  | || ||||||| | |||| |||||||||||||||||||||||    
T  42982586 aattgatttttacacacaaatttattttacaactcacttttacatgaatgtatccaa 42982642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 10055031 - 10054955
Alignment:
Q  59 caactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    ||||||| |||||  ||| |||||||||||||||||||||||||||||| ||| ||||||||||| | |||||||||    
T  10055031 caactcaattttaactaatatcaattttacaaaaccaattcattcaaaatcaacttttgtcaccgcaaaaccaaaca 10054955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 139 - 230
Target Start/End: Original strand, 7262969 - 7263060
Alignment:
Q  139 gtttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||| |||||||||| || ||| ||||| |||||| ||| ||| ||||||||||||||||| || |||| |||||||||| ||||||||||    
T  7262969 gtttggttccacttttagatgaggcaaaattgattctagaagtgtagaattgattttgacattttaggatgttctcgagtataattgatttt 7263060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 29240639 - 29240547
Alignment:
Q  139 gtttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgatttta 231  Q
    ||||| |||||||||||| |||  ||||| |||||| ||| ||| | |||||||||||||||||| |||| || || ||||||||||||||||    
T  29240639 gtttggttccacttttgggggaatcaaaattgattctagaggtgtaaaattgattttgacatgttaggatattttcaagtagaattgatttta 29240547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 138
Target Start/End: Original strand, 1500010 - 1500097
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaacatac 138  Q
    |||||| ||||||| ||||||   |||||||||||||||||| ||||||| |||||| |||||||||||| |  ||||||||| ||||    
T  1500010 tttacactcaactcgcttttagccaaaatcaattttacaaaatcaattcagtcaaaatcaatttttgtcaactcagaaccaaaaatac 1500097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 19260858 - 19260774
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    |||| |||||||||| |||||   | ||||||||||||| |||||| |||||||||| || |||||||||||| | |||||||||    
T  19260858 tttatattcaactcaattttagccagaatcaattttacagaaccaaatcattcaaaatcattttttgtcaccgcacaaccaaaca 19260774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 19261040 - 19260980
Alignment:
Q  169 tgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgattt 229  Q
    |||||||||| |||  |||||||||||||||||||||||| ||||||||  ||||||||||    
T  19261040 tgattccagaagtgttgaattgattttgacatgtttggatgttctcgagatgaattgattt 19260980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 10564893 - 10564807
Alignment:
Q  55 cattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaa-tttttgtcaccgtagaaccaaacatacgt 140  Q
    |||||||||||||| ||  |||||  |||||||||||| || || |||||||| ||| |||||||||||| ||||||||||| ||||    
T  10564893 cattcaactcacttctaactaaaagaaattttacaaaatcagttaattcaaaatcaattttttgtcaccgcagaaccaaacacacgt 10564807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 319
Target Start/End: Complemental strand, 34027472 - 34027407
Alignment:
Q  254 ttttgtttctacaattgatttttagcctcagatttattattcaacccacttttacatgaatgtatc 319  Q
    ||||| ||||| ||||||||||||  |||| |||||||||||||| |||| |||||||||| ||||    
T  34027472 ttttgattctagaattgatttttacactcaaatttattattcaactcactcttacatgaatatatc 34027407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 34620790 - 34620851
Alignment:
Q  145 ttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttgg 206  Q
    ||||||||||||||||  ||||| |||||| | | ||| |||||||||||||||||||||||    
T  34620790 ttccacttttggaggacccaaaattgattctaaaggtgtagaattgattttgacatgtttgg 34620851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 34748227 - 34748288
Alignment:
Q  145 ttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttgg 206  Q
    ||||||||||||||||  ||||| |||||| | | ||| |||||||||||||||||||||||    
T  34748227 ttccacttttggaggacccaaaattgattctaaaggtgtagaattgattttgacatgtttgg 34748288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 314
Target Start/End: Original strand, 9505776 - 9505860
Alignment:
Q  230 taacttgaaaacagaattaggagtttttgtttctacaattgatttttagcctcagatttattattcaacccacttttacatgaat 314  Q
    ||||||||| | |||| | |||| ||||| |||||  |||||||||||  |||| ||||||| |||||| |||||||||||||||    
T  9505776 taacttgaagatagaaattggagcttttgattctatgattgatttttaaactcaaatttattgttcaacacacttttacatgaat 9505860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 107
Target Start/End: Complemental strand, 9043774 - 9043723
Alignment:
Q  56 attcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaa 107  Q
    ||||||||||||||||  ||||||||||| ||||||| ||||||||| ||||    
T  9043774 attcaactcacttttaactaaaatcaattatacaaaatcaattcattaaaaa 9043723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 3002827 - 3002885
Alignment:
Q  76 aaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaac 134  Q
    ||||||||| || |||| |||||||||||||| ||||| || ||||||| |||||||||    
T  3002827 aaatcaattctagaaaatcaattcattcaaaaacaattgttatcaccgtggaaccaaac 3002885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 216
Target Start/End: Complemental strand, 6214905 - 6214875
Alignment:
Q  186 aattgattttgacatgtttggattttctcga 216  Q
    |||||||||||||||||||||||||||||||    
T  6214905 aattgattttgacatgtttggattttctcga 6214875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 34620922 - 34620984
Alignment:
Q  260 ttctacaattgatttttagcctcagatttattattcaacccacttttacatgaatgtatccaa 322  Q
    ||||| ||||||||||||  || | ||||||| |||||| ||||||||||| |||||||||||    
T  34620922 ttctagaattgatttttacactaaaatttatttttcaactcacttttacataaatgtatccaa 34620984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 34748359 - 34748421
Alignment:
Q  260 ttctacaattgatttttagcctcagatttattattcaacccacttttacatgaatgtatccaa 322  Q
    ||||| ||||||||||||  || | ||||||| |||||| ||||||||||| |||||||||||    
T  34748359 ttctagaattgatttttacactaaaatttatttttcaactcacttttacataaatgtatccaa 34748421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 322
Target Start/End: Complemental strand, 1485206 - 1485133
Alignment:
Q  249 ggagtttttgtttctacaattgatttttagcctcagatttattattcaacccacttttacatgaatgtatccaa 322  Q
    |||| ||||| ||||| |||||||||| |  |||| ||||||| |||||| ||||||||||| | |||||||||    
T  1485206 ggagcttttgattctagaattgattttaacactcaaatttattgttcaactcacttttacataagtgtatccaa 1485133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 2002607 - 2002566
Alignment:
Q  184 agaattgattttgacatgtttggattttctcgagtagaattg 225  Q
    ||||||||||||||||||||||| | || |||||||||||||    
T  2002607 agaattgattttgacatgtttggttgttttcgagtagaattg 2002566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 3525039 - 3525100
Alignment:
Q  55 cattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaattttt 116  Q
    |||||||||||||||||   | ||||||||||||| || ||||||||||||||  |||||||    
T  3525039 cattcaactcacttttagccacaatcaattttacataatcaattcattcaaaattaattttt 3525100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 14391015 - 14391080
Alignment:
Q  73 ataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaacatac 138  Q
    ||||||||||||| |||| | |||| |||| |||| ||||| |||| |||| ||||||||||||||    
T  14391015 ataaaatcaatttcacaacatcaatgcatttaaaatcaattgttgtaaccgcagaaccaaacatac 14391080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 135
Target Start/End: Original strand, 20871626 - 20871695
Alignment:
Q  66 cttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    ||||||| |||||||||||||||| || ||||||| | |||| ||||| || ||||  ||||||||||||    
T  20871626 cttttatctaaaatcaattttacacaatcaattcaataaaaatcaattattatcactatagaaccaaaca 20871695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 25208734 - 25208771
Alignment:
Q  49 attttacattcaactcacttttatataaaatcaatttt 86  Q
    |||||||||||||||||||||||  |||||||||||||    
T  25208734 attttacattcaactcacttttaattaaaatcaatttt 25208771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 33136623 - 33136578
Alignment:
Q  186 aattgattttgacatgtttggattttctcgagtagaattgatttta 231  Q
    ||||||||||||||||||||| |  ||||||||| |||||||||||    
T  33136623 aattgattttgacatgtttggttgctctcgagtataattgatttta 33136578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 230
Target Start/End: Complemental strand, 10400883 - 10400791
Alignment:
Q  139 gtttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggatt-ttctcgagtagaattgatttt 230  Q
    ||||| ||||||| ||||||||  ||||| |||||| ||| ||| | |||||||||||| |||||||| ||  | ||||||||||||| ||||    
T  10400883 gtttggttccactcttggaggatgcaaaattgattctagaggtgtataattgattttgatatgtttggtttgctttcgagtagaattgttttt 10400791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 136
Target Start/End: Complemental strand, 10755435 - 10755399
Alignment:
Q  100 attcaaaaccaatttttgtcaccgtagaaccaaacat 136  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  10755435 attcaaaatcaatttttgtcaccgcagaaccaaacat 10755399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 19601715 - 19601771
Alignment:
Q  139 gtttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgatttt 195  Q
    ||||| ||||||||||||||||| ||||| ||||||||||  || ||||||| ||||    
T  19601715 gtttggttccacttttggaggagtcaaaattgattccagagatgtagaattgttttt 19601771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 135
Target Start/End: Original strand, 24916592 - 24916678
Alignment:
Q  49 attttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    |||||||||||||||||||||||     |||||||||||||||| ||| || |||||||  |||||||||||||| |||||||||||    
T  24916592 attttacattcaactcacttttagcctgaatcaattttacaaaatcaactcgttcaaaattaatttttgtcaccgcagaaccaaaca 24916678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 21513491 - 21513420
Alignment:
Q  164 aaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgattttaactt 235  Q
    |||| |||||| ||| ||| |||||||||||| ||||| |||||| ||||| ||||||||||||||||||||    
T  21513491 aaaattgattctagaggtggagaattgattttaacatgcttggatgttctcaagtagaattgattttaactt 21513420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 206
Target Start/End: Original strand, 3776438 - 3776504
Alignment:
Q  140 tttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttgg 206  Q
    |||| ||||||||||||||||||||||| || ||  ||| ||| |||||||||||||||||||||||    
T  3776438 tttggttccacttttggaggagacaaaattggttatagaggtgtagaattgattttgacatgtttgg 3776504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 30958147 - 30958209
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatt 113  Q
    |||||||||||||||| ||||   |||||||||||||||||| |||||||||||||| |||||    
T  30958147 tttacattcaactcacatttagccaaaatcaattttacaaaatcaattcattcaaaatcaatt 30958209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 30973959 - 30974021
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatt 113  Q
    |||||||||||||||| ||||   |||||||||||||||||| |||||||||||||| |||||    
T  30973959 tttacattcaactcacatttagccaaaatcaattttacaaaatcaattcattcaaaatcaatt 30974021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 228
Target Start/End: Complemental strand, 3845299 - 3845210
Alignment:
Q  139 gtttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgatt 228  Q
    ||||| |||||||||||||| |  ||||| |||||| ||| ||| ||||||||||||||||||||||  |  |||| |||||||||||||    
T  3845299 gtttggttccacttttggagtaaccaaaattgattctagaggtgtagaattgattttgacatgtttgtttgatctcaagtagaattgatt 3845210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 39658048 - 39657963
Alignment:
Q  48 tattttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaa 133  Q
    |||||||||||||||  |||||||  |||||||||||||||| || ||||| |||||||| |||||||| | | |||| |||||||    
T  39658048 tattttacattcaacgaacttttaagtaaaatcaattttacataatcaatttattcaaaatcaatttttattatcgtataaccaaa 39657963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 51667100 - 51667225
Alignment:
Q  189 tgattttgacatgtttggattttctcgagtagaattgattttaacttgaaaacagaattaggagtttttgtttctacaattgatttttagcctcagattt 288  Q
    |||||||||||||||| |||  |||| |||| |||||||| |||| ||||  ||||||| ||||||||||   |||  |||||| || |||||   ||||    
T  51667100 tgattttgacatgttttgatgctctcaagtataattgattataacatgaagccagaatttggagtttttgcaactatgattgatattcagccttgaattt 51667199  T
Q  289 attattcaacccacttttacatgaat 314  Q
    ||| |||||| |||||||||||||||    
T  51667200 attgttcaacgcacttttacatgaat 51667225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 52925792 - 52925731
Alignment:
Q  145 ttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttgg 206  Q
    ||||||||||||||||| ||||| |||||| ||| ||| | |||||||||||||||||||||    
T  52925792 ttccacttttggaggagtcaaaattgattctagaggtgtataattgattttgacatgtttgg 52925731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 31766216 - 31766160
Alignment:
Q  57 ttcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatt 113  Q
    ||||||||||||||||  ||||| |||||||||||| |||||||||||||| |||||    
T  31766216 ttcaactcacttttatccaaaattaattttacaaaatcaattcattcaaaatcaatt 31766160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 25129513 - 25129430
Alignment:
Q  52 ttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    |||||||||||||||||||||    |||||||||||||| | |||||||||||| | |||||| ||||||   |||||||||||    
T  25129513 ttacattcaactcacttttatcctgaatcaattttacaacatcaattcattcaagatcaatttatgtcactagagaaccaaaca 25129430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 49158642 - 49158693
Alignment:
Q  63 tcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaattt 114  Q
    |||||||||| | ||||||||||||||||| |||||||||||||| ||||||    
T  49158642 tcacttttatcttaaatcaattttacaaaatcaattcattcaaaatcaattt 49158693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 282
Target Start/End: Complemental strand, 8011373 - 8011304
Alignment:
Q  213 tcgagtagaattgattttaacttgaaaacagaattaggagtttttgtttctacaattgatttttagcctc 282  Q
    ||||||| |||||||| |||| ||||   |||||| ||||||||||| | ||||||||||||||||||||    
T  8011373 tcgagtaaaattgattataacgtgaatctagaatttggagtttttgtatgtacaattgatttttagcctc 8011304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 42644316 - 42644401
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaa-ttttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    |||||||||||||||||||||  ||||||||| ||||| |||| ||||||| |||||| ||||| |  |||||| | |||||||||    
T  42644316 tttacattcaactcacttttaactaaaatcaatttttataaaatcaattcactcaaaatcaattctcatcaccgcataaccaaaca 42644401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 2410070 - 2410026
Alignment:
Q  186 aattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    |||| |||||||||||||||||| ||||| |||||||||||||||    
T  2410070 aatttattttgacatgtttggatgttctcaagtagaattgatttt 2410026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 29120208 - 29120128
Alignment:
Q  145 ttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattg 225  Q
    ||||| |||| |||||| ||||| |||||||| ||||| |||||| ||| ||||||  ||| || ||||||||||||||||    
T  29120208 ttccatttttagaggaggcaaaattgattccaaatgtgtagaattaattctgacatagttgcatgttctcgagtagaattg 29120128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 43987692 - 43987648
Alignment:
Q  186 aattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||    
T  43987692 aattgattttgacatgtttggatgttcttgagtacaattgatttt 43987648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 230
Target Start/End: Complemental strand, 1441568 - 1441477
Alignment:
Q  139 gtttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||| |||||||||||||| |  ||||| |  ||| ||| ||| |||||||| |||||||||||||| || | | ||||||||||||||||    
T  1441568 gtttggttccacttttggagtaaccaaaattatttctagaggtgtagaattgagtttgacatgtttggtttcttttgagtagaattgatttt 1441477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 135
Target Start/End: Complemental strand, 27825357 - 27825270
Alignment:
Q  48 tattttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    ||||||| |||||||| |||||||   | ||||||||||| ||||  ||||||||||||| |||||| ||| |||| | |||||||||    
T  27825357 tattttatattcaactaacttttagtcataatcaattttataaaataaattcattcaaaatcaatttgtgttaccgcataaccaaaca 27825270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 35950991 - 35951046
Alignment:
Q  184 agaattgattttgacatgtttggattttctcgagtagaattgattttaacttgaaa 239  Q
    |||||||| ||||||| |||||| | ||||||||||||||||||| ||| ||||||    
T  35950991 agaattgagtttgacaggtttggttgttctcgagtagaattgattctaatttgaaa 35951046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 49634056 - 49633997
Alignment:
Q  56 attcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttt 115  Q
    ||||||||||||||||  | |||| |||||||||||| ||||||| |||||| |||||||    
T  49634056 attcaactcacttttaacttaaattaattttacaaaatcaattcaatcaaaatcaatttt 49633997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 135
Target Start/End: Original strand, 25181262 - 25181348
Alignment:
Q  49 attttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    |||||||||| ||||||||||||   |||||||||| ||||||| ||||||| |||| | ||||| | | ||||| | |||||||||    
T  25181262 attttacattaaactcacttttaatcaaaatcaattctacaaaatcaattcaatcaatatcaattctagccaccgcataaccaaaca 25181348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 35253516 - 35253454
Alignment:
Q  260 ttctacaattgatttttagcctcagatttattattcaacccacttttacatgaatgtatccaa 322  Q
    ||||| ||||||||||||  |||| |||||| ||||||| ||||||||||||| ||| |||||    
T  35253516 ttctagaattgatttttacactcaaatttatcattcaactcacttttacatgattgtttccaa 35253454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 121
Target Start/End: Original strand, 44771862 - 44771908
Alignment:
Q  75 aaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcac 121  Q
    ||||||||||||||| || |||||||||||||| ||||| |||||||    
T  44771862 aaaatcaattttacataatcaattcattcaaaatcaattcttgtcac 44771908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 584762 - 584709
Alignment:
Q  57 ttcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaacca 110  Q
    ||||||| | |||||  ||||||||||||||||||| ||||||| |||||||||    
T  584762 ttcaacttaattttagctaaaatcaattttacaaaatcaattcactcaaaacca 584709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Complemental strand, 31708263 - 31708226
Alignment:
Q  285 atttattattcaacccacttttacatgaatgtatccaa 322  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  31708263 atttataattcaactcacttttacatgaatgtatccaa 31708226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 41115344 - 41115275
Alignment:
Q  44 aaactattttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatt 113  Q
    |||| ||||||||||||||||| | |||   |||||||||| ||||||| ||||||||||| || |||||    
T  41115344 aaaccattttacattcaactcattgttagccaaaatcaattatacaaaatcaattcattcataatcaatt 41115275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 48089667 - 48089610
Alignment:
Q  49 attttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaa 106  Q
    |||||||||||||||||||||||  || ||||||||||| | || ||||| |||||||    
T  48089667 attttacattcaactcacttttaactagaatcaattttaaagaatcaatttattcaaa 48089610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 1227738 - 1227698
Alignment:
Q  251 agtttttgtttctacaattgatttttagcctcagatttatt 291  Q
    |||||||| |||||||||||||||||||| ||| |||||||    
T  1227738 agtttttgcttctacaattgatttttagcatcaaatttatt 1227698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 38626764 - 38626836
Alignment:
Q  49 attttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcac 121  Q
    |||| ||||||||||||||||||  |||| || | |||||| || ||||||||| |||| |||||| ||||||    
T  38626764 atttcacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaatttatgtcac 38626836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 48089737 - 48089693
Alignment:
Q  261 tctacaattgatttttagcctcagatttattattcaacccacttt 305  Q
    ||||||| ||||||||||||||| | ||||| |||||||||||||    
T  48089737 tctacaaatgatttttagcctcaaagttattgttcaacccacttt 48089693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 51285600 - 51285668
Alignment:
Q  254 ttttgtttctacaattgatttttagcctcagatttattattcaacccacttttacatgaatgtatccaa 322  Q
    ||||| ||||| |||||||||||   |||| |||| || || ||||| |||||||||||||||||||||    
T  51285600 ttttgattctagaattgatttttgcactcaaatttgttgtttaacccgcttttacatgaatgtatccaa 51285668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 53567990 - 53568050
Alignment:
Q  55 cattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttt 115  Q
    |||||||||||||||||   ||||||||||||  |||| ||||||| |||||| |||||||    
T  53567990 cattcaactcacttttaatcaaaatcaattttgtaaaatcaattcactcaaaatcaatttt 53568050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 319
Target Start/End: Complemental strand, 13929734 - 13929687
Alignment:
Q  272 tttttagcctcagatttattattcaacccacttttacatgaatgtatc 319  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||    
T  13929734 tttttagcctcaaatttatttttcaacccacttttacatgaatgtatc 13929687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 138
Target Start/End: Complemental strand, 2031956 - 2031884
Alignment:
Q  66 cttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaacatac 138  Q
    |||||| ||||||| ||||||||||||  ||||| ||||||| |||||||| ||||| || ||||||||||||    
T  2031956 cttttaaataaaataaattttacaaaataaattctttcaaaatcaatttttctcaccataaaaccaaacatac 2031884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 138
Target Start/End: Original strand, 10368075 - 10368162
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaacatac 138  Q
    ||||| |||||||||||||||   |||||||||||||||||| ||||||| |||||| ||||| || |||| |   ||||||||||||    
T  10368075 tttaccttcaactcacttttactcaaaatcaattttacaaaaacaattcactcaaaatcaattcttatcactgcgaaaccaaacatac 10368162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 13929847 - 13929808
Alignment:
Q  186 aattgattttgacatgtttggattttctcgagtagaattg 225  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  13929847 aattgattttgacatgtttggatgttctcgagtagaattg 13929808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 11038081 - 11038171
Alignment:
Q  140 tttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    |||||||  |||||| || ||||||||| |||||| ||| ||  | ||||||||||||||||||||||| ||||||| | || ||||||||    
T  11038081 tttgttttaactttttgacgagacaaaattgattctagaggtatataattgattttgacatgtttggatgttctcgaatggagttgatttt 11038171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 319
Target Start/End: Original strand, 35775222 - 35775292
Alignment:
Q  249 ggagtttttgtttctacaattgatttttagcctcagatttattattcaacccacttttacatgaatgtatc 319  Q
    |||| |||||| |||||||||||||||||||||   ||| ||| ||||| ||||||||||||||| |||||    
T  35775222 ggagcttttgtctctacaattgatttttagccttgaattcattgttcaatccacttttacatgaacgtatc 35775292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 37159451 - 37159381
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcac 121  Q
    |||||||||||||| ||||||  |||||| ||||||||| || |||||| |||||||  ||||||||||||    
T  37159451 tttacattcaactcccttttagttaaaattaattttacacaatcaattcgttcaaaattaatttttgtcac 37159381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 38875405 - 38875359
Alignment:
Q  184 agaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    |||||||||||||||||||||| ||||||| || |||||||||||||    
T  38875405 agaattgattttgacatgtttgaattttcttgaatagaattgatttt 38875359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 34957063 - 34957018
Alignment:
Q  90 aaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    |||||||||||||||||| |||||||||||| || |||||||||||    
T  34957063 aaaccaattcattcaaaatcaatttttgtcagcgcagaaccaaaca 34957018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 135
Target Start/End: Complemental strand, 41891859 - 41891782
Alignment:
Q  58 tcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    ||||||||||| ||  ||||||||||| ||||||| ||||||| ||||||  |||||| ||||||| | |||||||||    
T  41891859 tcaactcacttctaactaaaatcaattctacaaaatcaattcaatcaaaattaattttagtcaccgcataaccaaaca 41891782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 232
Target Start/End: Complemental strand, 8916903 - 8916819
Alignment:
Q  148 cacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgattttaa 232  Q
    |||||||||||||| ||||| |||||| ||| |   | |||||||||||||||  |||||| || | ||||||||||||||||||    
T  8916903 cacttttggaggagtcaaaattgattctagaagcatacaattgattttgacataattggatgttattgagtagaattgattttaa 8916819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 36779453 - 36779537
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    |||||||||||||||||||||   |||||||||| ||||||| |||||   |||||| ||||| | ||||||| | |||||||||    
T  36779453 tttacattcaactcacttttaatcaaaatcaattctacaaaatcaattatatcaaaatcaattctcgtcaccgcacaaccaaaca 36779537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 317
Target Start/End: Complemental strand, 37451996 - 37451952
Alignment:
Q  273 ttttagcctcagatttattattcaacccacttttacatgaatgta 317  Q
    ||||||||||| ||||||||||| || ||||||||||||||||||    
T  37451996 ttttagcctcaaatttattattcgactcacttttacatgaatgta 37451952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 38516360 - 38516416
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaa 107  Q
    ||||||||||||||||| ||||  |||||||||| ||||||| ||||||| ||||||    
T  38516360 tttacattcaactcactattatcgaaaatcaattctacaaaatcaattcactcaaaa 38516416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 99
Target Start/End: Original strand, 1373107 - 1373149
Alignment:
Q  57 ttcaactcacttttatataaaatcaattttacaaaaccaattc 99  Q
    ||||||||||||||||  |||||||||||||||||| ||||||    
T  1373107 ttcaactcacttttatccaaaatcaattttacaaaatcaattc 1373149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 39648332 - 39648242
Alignment:
Q  139 gtttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgattt 229  Q
    ||||| || ||||||| |||||| ||||| |||||| |||  || | ||||||||||||||||||||| || |||  |||| |||||||||    
T  39648332 gtttggttacacttttagaggagtcaaaattgattctagagatgtataattgattttgacatgtttggtttctctatagtaaaattgattt 39648242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 41408258 - 41408336
Alignment:
Q  57 ttcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    ||||| |||||| ||  ||||||||||| |||||||  |||||| |||||| |||||||  |||||||| |||||||||    
T  41408258 ttcaattcacttctaactaaaatcaattctacaaaattaattcaatcaaaatcaattttaatcaccgtataaccaaaca 41408336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 4336344 - 4336389
Alignment:
Q  184 agaattgattttgacatgtttggattttctcgagtagaattgattt 229  Q
    ||||||||||||||||||||||| |  ||||||||| |||||||||    
T  4336344 agaattgattttgacatgtttggttggtctcgagtataattgattt 4336389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 18355798 - 18355753
Alignment:
Q  77 aatcaattttacaaaaccaattcattcaaaaccaatttttgtcacc 122  Q
    |||||||||||||||| ||||||| |||||| |||||||| |||||    
T  18355798 aatcaattttacaaaatcaattcactcaaaatcaatttttatcacc 18355753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 138
Target Start/End: Complemental strand, 32994217 - 32994128
Alignment:
Q  49 attttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaacatac 138  Q
    ||||||| ||||||||||||| |   | ||||||||||||| || || ||||||||||| ||||| |  |||| | ||||||||||||||    
T  32994217 attttaccttcaactcactttcagccagaatcaattttacataatcagttcattcaaaatcaattgtcatcactgcagaaccaaacatac 32994128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 35495158 - 35495223
Alignment:
Q  139 gtttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttgacatgttt 204  Q
    ||||| |||||||||||||| |  ||||| |||||| | | ||| |||||||||||||||||||||    
T  35495158 gtttggttccacttttggagcacccaaaattgattctacaagtgtagaattgattttgacatgttt 35495223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 35550283 - 35550347
Alignment:
Q  51 tttacattcaactcactttt-atataaaatcaattttacaaaaccaattcattcaaaaccaatttt 115  Q
    |||||| | ||||||||||| ||| |||||||||||||||||| ||||||| |||||| |||||||    
T  35550283 tttacactaaactcacttttgata-aaaatcaattttacaaaatcaattcaatcaaaatcaatttt 35550347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 230
Target Start/End: Complemental strand, 36448003 - 36447966
Alignment:
Q  193 tttgacatgtttggattttctcgagtagaattgatttt 230  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  36448003 tttgacatgtttggatgttctcgggtagaattgatttt 36447966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 2778390 - 2778354
Alignment:
Q  49 attttacattcaactcacttttatataaaatcaattt 85  Q
    |||||||||||||||||||||||  ||||||||||||    
T  2778390 attttacattcaactcacttttaagtaaaatcaattt 2778354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 5400182 - 5400118
Alignment:
Q  57 ttcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcac 121  Q
    |||||||||||||||   |||||||||||||||||| ||||  ||| ||||  ||||||||||||    
T  5400182 ttcaactcacttttagcaaaaatcaattttacaaaatcaatcaatttaaaatgaatttttgtcac 5400118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 10552956 - 10552892
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttt 115  Q
    |||||||||||||||||||||   ||||||||||||| |  | ||||| ||||||| ||||||||    
T  10552956 tttacattcaactcacttttaaccaaaatcaattttagagtatcaatttattcaaatccaatttt 10552892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 38335830 - 38335751
Alignment:
Q  57 ttcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaacata 137  Q
    ||||||||||||||| || |||| |||||||||    ||||| | |||||| ||||| ||||||||| |||||||||||||    
T  38335830 ttcaactcactttta-atcaaattaattttacattgtcaattaactcaaaatcaattcttgtcaccgaagaaccaaacata 38335751  T

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Target: scaffold0172 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 15304 - 15220
Alignment:
Q  51 tttacattcaactcacttttatataaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    |||| ||||||||||||||||   ||||||||||| |||||| ||||||  |||||| ||||||| ||||||| | |||||||||    
T  15304 tttatattcaactcacttttaaccaaaatcaatttgacaaaatcaattctatcaaaatcaattttcgtcaccgcacaaccaaaca 15220  T

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Target: scaffold0036 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 1070 - 943
Alignment:
Q  186 aattgattttgacatgtttggattttctcgagtagaattgattttaacttgaaaacagaattaggagtttttgtttctacaattgatttttagcctcaga 285  Q
    |||| |||||||||||||||||| ||||  |||| |||||||| ||||| |||   |||||| | |||||||   |||||||||   ||||||||||  |    
T  1070 aattaattttgacatgtttggatattcttaagtataattgattctaactagaagctagaatttgaagtttttacctctacaatt---ttttagcctctaa 974  T
Q  286 tttattattcaacccacttttacatgaatgt 316  Q
    |||||| ||||||  ||||||||||||||||    
T  973 tttattgttcaacttacttttacatgaatgt 943  T

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Target: scaffold0361 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 14163 - 14101
Alignment:
Q  260 ttctacaattgatttttagcctcagatttattattcaacccacttttacatgaatgtatccaa 322  Q
    ||||| ||||||||||||  |||| ||||||| |||||| |||||| ||||||||||||||||    
T  14163 ttctagaattgatttttacactcaaatttatttttcaactcactttcacatgaatgtatccaa 14101  T

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Target: scaffold0361; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 14300 - 14242
Alignment:
Q  139 gtttgtttccacttttggaggagacaaaagtgattccagatgtgaagaattgattttga 197  Q
    ||||| ||||||||||||| ||| ||||| ||| || ||||||| ||||||||||||||    
T  14300 gtttggttccacttttggaagagccaaaattgaatctagatgtgtagaattgattttga 14242  T

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Target: scaffold1191 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1191
Description:

Target: scaffold1191; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 55 - 116
Alignment:
Q  74 taaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    ||||||||| ||||||| |||||| ||||||||| |||||||||||| || | |||||||||    
T  55 taaaatcaactttacaagaccaatccattcaaaatcaatttttgtcaacgcataaccaaaca 116  T

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Target: scaffold0571 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 7825 - 7886
Alignment:
Q  74 taaaatcaattttacaaaaccaattcattcaaaaccaatttttgtcaccgtagaaccaaaca 135  Q
    ||||||||| ||||||| |||||| ||||||||| |||||||||||| || | |||||||||    
T  7825 taaaatcaactttacaagaccaatccattcaaaatcaatttttgtcatcgcataaccaaaca 7886  T

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Target: scaffold0248 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 13324 - 13275
Alignment:
Q  49 attttacattcaactcacttttatataaaatcaattttacaaaaccaatt 98  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||| |||||    
T  13324 attttacattcaactcaattttaaatataatcaattttacaaaatcaatt 13275  T

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Target: scaffold0393 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 230
Target Start/End: Complemental strand, 12495 - 12403
Alignment:
Q  139 gtttgtttccacttttggaggagacaaaagtgattccagatgtg-aagaattgattttgacatgtttggattttctcgagtagaattgatttt 230  Q
    ||||| || |||||||||||||| ||||| || ||| | | ||| || || | |||||||||||||||||| ||||| |||||||||||||||    
T  12495 gtttgatttcacttttggaggagtcaaaattgtttctaaaggtgtaaaaaattattttgacatgtttggatgttctcaagtagaattgatttt 12403  T

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Target: scaffold0168 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 31748 - 31813
Alignment:
Q  163 caaaagtgattccagatgtgaagaattgattttgacatgtttggattttctcgagtagaattgatt 228  Q
    ||||| |||||| ||| ||| |||||||||| |||||||||||| | || ||||||| ||||||||    
T  31748 caaaattgattctagaggtgtagaattgattctgacatgtttggttgttgtcgagtaaaattgatt 31813  T

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