View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0812_low_5 (Length: 692)

Name: NF0812_low_5
Description: NF0812
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0812_low_5
NF0812_low_5
[»] chr1 (57 HSPs)
chr1 (13-594)||(23664087-23664674)
chr1 (202-594)||(25094886-25095290)
chr1 (444-594)||(17967303-17967453)
chr1 (307-594)||(21906212-21906504)
chr1 (422-594)||(5049408-5049580)
chr1 (422-594)||(22070456-22070628)
chr1 (444-594)||(48596331-48596481)
chr1 (307-594)||(34307425-34307717)
chr1 (447-594)||(27430769-27430916)
chr1 (422-594)||(48999356-48999526)
chr1 (450-559)||(49229351-49229460)
chr1 (447-559)||(5509869-5509980)
chr1 (445-560)||(12027763-12027878)
chr1 (444-558)||(5209695-5209809)
chr1 (449-559)||(9023193-9023303)
chr1 (444-561)||(36296668-36296785)
chr1 (455-561)||(24185677-24185782)
chr1 (444-561)||(42722203-42722320)
chr1 (444-560)||(28945832-28945948)
chr1 (450-530)||(47397570-47397650)
chr1 (510-594)||(26465116-26465202)
chr1 (444-547)||(48646129-48646232)
chr1 (111-171)||(5049096-5049156)
chr1 (444-560)||(26221650-26221766)
chr1 (444-532)||(44310430-44310518)
chr1 (109-171)||(42721893-42721954)
chr1 (110-171)||(22070144-22070205)
chr1 (458-559)||(41665592-41665692)
chr1 (111-171)||(21906021-21906081)
chr1 (111-171)||(26221341-26221400)
chr1 (111-171)||(36296358-36296417)
chr1 (444-556)||(12783987-12784098)
chr1 (111-171)||(28946201-28946260)
chr1 (111-234)||(48999050-48999175)
chr1 (494-559)||(47559565-47559629)
chr1 (317-366)||(48596557-48596606)
chr1 (110-158)||(1347121-1347168)
chr1 (494-558)||(17385407-17385470)
chr1 (111-171)||(27431192-27431252)
chr1 (658-692)||(25095358-25095392)
chr1 (192-246)||(27431114-27431168)
chr1 (190-252)||(44310182-44310244)
chr1 (658-692)||(44310837-44310871)
chr1 (194-252)||(48596663-48596721)
chr1 (114-171)||(34307849-34307905)
chr1 (307-379)||(17967523-17967595)
chr1 (307-379)||(27430989-27431061)
chr1 (111-171)||(48596746-48596806)
chr1 (120-171)||(9022867-9022918)
chr1 (658-692)||(8737770-8737804)
chr1 (194-252)||(9022943-9023000)
chr1 (112-158)||(9956586-9956631)
chr1 (317-379)||(22070346-22070408)
chr1 (658-692)||(23663988-23664022)
chr1 (111-156)||(32179194-32179238)
chr1 (307-379)||(48999240-48999310)
chr1 (194-246)||(5049182-5049233)
[»] chr8 (47 HSPs)
chr8 (297-594)||(16729554-16729855)
chr8 (307-594)||(45117299-45117591)
chr8 (422-594)||(1981549-1981721)
chr8 (422-594)||(3762650-3762822)
chr8 (307-594)||(31597354-31597647)
chr8 (444-594)||(4432051-4432201)
chr8 (447-594)||(40971420-40971567)
chr8 (319-594)||(7263611-7263891)
chr8 (297-594)||(7972960-7973262)
chr8 (448-581)||(39906226-39906359)
chr8 (444-559)||(9137509-9137625)
chr8 (111-252)||(7973299-7973442)
chr8 (447-560)||(9382238-9382351)
chr8 (111-250)||(16729378-16729516)
chr8 (444-559)||(24190359-24190474)
chr8 (450-560)||(11648767-11648876)
chr8 (444-558)||(6927561-6927675)
chr8 (444-561)||(28509226-28509343)
chr8 (110-171)||(3762338-3762399)
chr8 (111-171)||(1981234-1981294)
chr8 (111-171)||(7264031-7264091)
chr8 (111-171)||(45117137-45117197)
chr8 (457-560)||(32073246-32073349)
chr8 (112-252)||(39905874-39906014)
chr8 (110-171)||(40971088-40971149)
chr8 (111-171)||(6927924-6927983)
chr8 (111-252)||(4432389-4432531)
chr8 (444-561)||(2879229-2879346)
chr8 (111-171)||(11995100-11995159)
chr8 (445-560)||(2807702-2807817)
chr8 (448-558)||(24682594-24682704)
chr8 (327-379)||(4432270-4432321)
chr8 (111-171)||(31597165-31597224)
chr8 (307-379)||(1981424-1981498)
chr8 (448-559)||(28374579-28374688)
chr8 (317-372)||(40971287-40971342)
chr8 (444-485)||(602275-602316)
chr8 (111-171)||(3509847-3509906)
chr8 (307-379)||(3762530-3762602)
chr8 (297-369)||(39906051-39906121)
chr8 (658-692)||(7972862-7972896)
chr8 (194-248)||(18327042-18327096)
chr8 (333-379)||(18327212-18327258)
chr8 (446-559)||(23232238-23232351)
chr8 (133-171)||(28508937-28508975)
chr8 (194-252)||(40971173-40971231)
chr8 (658-688)||(40971616-40971646)
[»] chr7 (62 HSPs)
chr7 (297-594)||(20394764-20395068)
chr7 (307-591)||(8389281-8389570)
chr7 (319-594)||(35477956-35478236)
chr7 (333-594)||(13753974-13754240)
chr7 (444-594)||(31072503-31072653)
chr7 (319-594)||(18667213-18667493)
chr7 (422-594)||(4539819-4539986)
chr7 (451-560)||(21863581-21863690)
chr7 (114-252)||(20395105-20395243)
chr7 (476-594)||(1623572-1623689)
chr7 (444-561)||(39038903-39039020)
chr7 (448-559)||(24441941-24442052)
chr7 (449-560)||(41822148-41822259)
chr7 (447-560)||(29636904-29637017)
chr7 (445-561)||(40934025-40934140)
chr7 (109-252)||(8389617-8389762)
chr7 (108-171)||(18667009-18667072)
chr7 (449-559)||(43179439-43179548)
chr7 (444-561)||(48636668-48636785)
chr7 (444-561)||(6189415-6189532)
chr7 (444-520)||(5770852-5770928)
chr7 (452-559)||(44733619-44733725)
chr7 (444-561)||(48238426-48238542)
chr7 (111-171)||(13753759-13753819)
chr7 (110-252)||(35478295-35478437)
chr7 (111-171)||(43823964-43824024)
chr7 (452-558)||(8604612-8604718)
chr7 (444-561)||(8069546-8069663)
chr7 (462-558)||(8113930-8114024)
chr7 (111-171)||(4539512-4539572)
chr7 (111-171)||(8069234-8069293)
chr7 (111-171)||(48238116-48238175)
chr7 (111-171)||(48636360-48636419)
chr7 (496-559)||(9420482-9420545)
chr7 (444-514)||(47522415-47522485)
chr7 (470-561)||(28460255-28460345)
chr7 (447-561)||(135632-135746)
chr7 (105-171)||(31072929-31072994)
chr7 (476-549)||(3124281-3124354)
chr7 (470-558)||(35118263-35118348)
chr7 (444-557)||(36628434-36628547)
chr7 (474-558)||(45446083-45446166)
chr7 (111-158)||(15680122-15680168)
chr7 (658-692)||(20394666-20394700)
chr7 (126-171)||(6189785-6189830)
chr7 (110-171)||(19312329-19312389)
chr7 (195-252)||(43824055-43824112)
chr7 (111-160)||(44733170-44733219)
chr7 (111-171)||(37549175-37549234)
chr7 (194-250)||(43179744-43179800)
chr7 (317-379)||(4539711-4539771)
chr7 (448-559)||(10015747-10015857)
chr7 (111-158)||(12379303-12379349)
chr7 (194-252)||(13753843-13753901)
chr7 (194-252)||(18667096-18667154)
chr7 (110-171)||(135356-135416)
chr7 (659-692)||(13754305-13754338)
chr7 (457-526)||(23381092-23381161)
chr7 (199-252)||(44733259-44733311)
chr7 (111-156)||(45446446-45446491)
chr7 (110-174)||(10016127-10016190)
chr7 (194-222)||(31072874-31072902)
[»] chr6 (44 HSPs)
chr6 (297-591)||(1422778-1423077)
chr6 (297-591)||(18675176-18675475)
chr6 (297-590)||(1131596-1131895)
chr6 (333-594)||(34043403-34043669)
chr6 (307-594)||(22012095-22012385)
chr6 (307-594)||(1603203-1603494)
chr6 (318-594)||(20990281-20990564)
chr6 (444-559)||(11680871-11680986)
chr6 (494-594)||(21442662-21442762)
chr6 (444-559)||(31129720-31129834)
chr6 (444-558)||(15060141-15060255)
chr6 (111-225)||(1131416-1131531)
chr6 (447-558)||(26817336-26817445)
chr6 (444-559)||(19107911-19108026)
chr6 (111-252)||(20990100-20990240)
chr6 (444-561)||(33516638-33516755)
chr6 (111-246)||(1603013-1603150)
chr6 (451-559)||(4065601-4065709)
chr6 (112-252)||(18674997-18675139)
chr6 (111-171)||(22012515-22012575)
chr6 (454-558)||(3229212-3229315)
chr6 (109-169)||(34040410-34040470)
chr6 (111-252)||(34043181-34043324)
chr6 (444-558)||(12269374-12269487)
chr6 (111-252)||(21442393-21442537)
chr6 (307-372)||(21442584-21442649)
chr6 (111-171)||(14677386-14677445)
chr6 (111-171)||(15059811-15059871)
chr6 (458-530)||(26212906-26212978)
chr6 (111-171)||(33516981-33517040)
chr6 (458-557)||(4090808-4090907)
chr6 (494-534)||(22524751-22524791)
chr6 (110-158)||(31475173-31475220)
chr6 (185-252)||(1422674-1422741)
chr6 (326-372)||(26213068-26213114)
chr6 (659-692)||(1131962-1131995)
chr6 (422-524)||(13758826-13758928)
chr6 (297-372)||(26817185-26817260)
chr6 (658-692)||(1423144-1423178)
chr6 (111-157)||(9534331-9534376)
chr6 (194-252)||(26817090-26817147)
chr6 (195-252)||(26213181-26213238)
chr6 (194-250)||(1213000-1213056)
chr6 (501-561)||(14677761-14677821)
[»] chr5 (44 HSPs)
chr5 (297-594)||(5578587-5578886)
chr5 (317-594)||(13490233-13490515)
chr5 (307-594)||(13382579-13382872)
chr5 (297-594)||(9409531-9409833)
chr5 (317-594)||(23962693-23962975)
chr5 (307-594)||(2676798-2677089)
chr5 (297-594)||(42879418-42879720)
chr5 (317-589)||(18888911-18889188)
chr5 (297-594)||(39537378-39537668)
chr5 (446-558)||(13826235-13826347)
chr5 (109-252)||(5578923-5579068)
chr5 (446-561)||(29789522-29789637)
chr5 (453-561)||(13820881-13820989)
chr5 (111-252)||(42879239-42879381)
chr5 (111-252)||(9409870-9410013)
chr5 (461-559)||(8806333-8806430)
chr5 (452-546)||(20892294-20892388)
chr5 (444-558)||(38915730-38915843)
chr5 (450-558)||(29149634-29149741)
chr5 (326-561)||(16040198-16040438)
chr5 (444-561)||(38491012-38491129)
chr5 (444-560)||(7850280-7850396)
chr5 (447-558)||(5121205-5121316)
chr5 (444-558)||(6769378-6769489)
chr5 (111-252)||(13490034-13490175)
chr5 (111-246)||(2676608-2676745)
chr5 (449-534)||(43171438-43171523)
chr5 (111-252)||(39537705-39537845)
chr5 (110-174)||(7849976-7850039)
chr5 (494-558)||(37134753-37134817)
chr5 (114-171)||(18888714-18888771)
chr5 (111-171)||(38490702-38490761)
chr5 (474-560)||(3654677-3654762)
chr5 (111-174)||(14652120-14652182)
chr5 (111-171)||(13383003-13383062)
chr5 (111-158)||(6950353-6950399)
chr5 (111-158)||(41869418-41869464)
chr5 (658-692)||(5578489-5578523)
chr5 (194-252)||(23962580-23962637)
chr5 (445-561)||(32698734-32698849)
chr5 (658-692)||(9409441-9409475)
chr5 (326-372)||(13826425-13826471)
chr5 (194-234)||(13382937-13382977)
chr5 (111-171)||(43324108-43324167)
[»] chr2 (66 HSPs)
chr2 (444-594)||(27861800-27861950)
chr2 (317-594)||(2553899-2554181)
chr2 (307-594)||(33015172-33015464)
chr2 (317-594)||(41825943-41826225)
chr2 (307-594)||(44314022-44314312)
chr2 (307-594)||(44322201-44322491)
chr2 (444-594)||(22575963-22576113)
chr2 (317-594)||(6221228-6221511)
chr2 (422-594)||(19685746-19685916)
chr2 (444-556)||(38566216-38566328)
chr2 (444-558)||(33054748-33054862)
chr2 (444-561)||(19091195-19091312)
chr2 (444-557)||(41302463-41302576)
chr2 (422-559)||(38422950-38423087)
chr2 (451-556)||(10022892-10022997)
chr2 (444-561)||(11199297-11199414)
chr2 (110-252)||(2553701-2553843)
chr2 (444-559)||(24484451-24484566)
chr2 (444-558)||(14903999-14904113)
chr2 (444-526)||(41422922-41423004)
chr2 (444-561)||(7880371-7880488)
chr2 (458-559)||(13597889-13597989)
chr2 (110-252)||(41826281-41826423)
chr2 (450-561)||(30386835-30386945)
chr2 (444-558)||(45277506-45277620)
chr2 (444-561)||(19677994-19678111)
chr2 (111-234)||(19685439-19685564)
chr2 (111-245)||(33015518-33015654)
chr2 (444-557)||(6882973-6883088)
chr2 (111-171)||(44314442-44314502)
chr2 (111-171)||(44322621-44322681)
chr2 (449-555)||(9057380-9057484)
chr2 (444-561)||(2565587-2565704)
chr2 (110-171)||(22576382-22576443)
chr2 (110-171)||(45277868-45277928)
chr2 (111-171)||(90716-90775)
chr2 (111-171)||(18781564-18781623)
chr2 (446-561)||(29303144-29303259)
chr2 (501-559)||(41422863-41422921)
chr2 (110-171)||(7880715-7880775)
chr2 (451-560)||(25621421-25621529)
chr2 (111-171)||(2565275-2565334)
chr2 (194-250)||(11199603-11199658)
chr2 (122-174)||(40709899-40709951)
chr2 (447-561)||(18781194-18781308)
chr2 (496-557)||(9425217-9425278)
chr2 (110-171)||(19674456-19674516)
chr2 (111-158)||(18582958-18583004)
chr2 (517-560)||(25416074-25416117)
chr2 (422-486)||(31549172-31549236)
chr2 (450-557)||(43673290-43673397)
chr2 (658-692)||(2554245-2554279)
chr2 (115-252)||(6221032-6221171)
chr2 (658-692)||(7444111-7444145)
chr2 (333-379)||(27862003-27862048)
chr2 (658-692)||(41825845-41825879)
chr2 (195-252)||(27862122-27862179)
chr2 (184-252)||(7443879-7443947)
chr2 (115-171)||(14903684-14903740)
chr2 (319-379)||(22576183-22576243)
chr2 (194-250)||(22576302-22576358)
chr2 (447-486)||(25416124-25416163)
chr2 (111-158)||(38696798-38696844)
chr2 (658-692)||(27861707-27861741)
chr2 (113-158)||(10022563-10022607)
chr2 (110-170)||(33054398-33054457)
[»] chr4 (59 HSPs)
chr4 (422-594)||(10095001-10095173)
chr4 (444-594)||(7413723-7413872)
chr4 (444-594)||(7459804-7459953)
chr4 (448-594)||(39480230-39480376)
chr4 (448-562)||(6261592-6261706)
chr4 (444-561)||(52458991-52459108)
chr4 (444-561)||(52460248-52460365)
chr4 (447-561)||(10142121-10142235)
chr4 (444-559)||(1843172-1843287)
chr4 (444-558)||(13957225-13957339)
chr4 (447-559)||(9921865-9921977)
chr4 (448-594)||(36213712-36213857)
chr4 (460-559)||(42512245-42512344)
chr4 (446-559)||(3665477-3665589)
chr4 (111-252)||(39480571-39480714)
chr4 (444-561)||(51337617-51337734)
chr4 (494-558)||(24611366-24611430)
chr4 (444-560)||(28143468-28143584)
chr4 (444-555)||(29283029-29283139)
chr4 (449-560)||(10373385-10373495)
chr4 (456-558)||(41509209-41509310)
chr4 (111-171)||(10095425-10095485)
chr4 (297-379)||(6261817-6261899)
chr4 (297-379)||(36213558-36213640)
chr4 (444-561)||(14192335-14192452)
chr4 (110-171)||(28143837-28143897)
chr4 (111-171)||(51337307-51337366)
chr4 (447-522)||(23935828-23935903)
chr4 (448-561)||(21319991-21320104)
chr4 (111-251)||(6261938-6262079)
chr4 (111-171)||(7414128-7414188)
chr4 (111-171)||(7460209-7460269)
chr4 (111-171)||(14192705-14192764)
chr4 (498-558)||(25201039-25201099)
chr4 (448-559)||(9900076-9900187)
chr4 (194-252)||(3665779-3665837)
chr4 (109-171)||(49242561-49242622)
chr4 (307-372)||(7413949-7414014)
chr4 (307-372)||(7460030-7460095)
chr4 (497-558)||(51890447-51890508)
chr4 (497-558)||(51890721-51890782)
chr4 (307-379)||(10095221-10095295)
chr4 (111-158)||(14033729-14033775)
chr4 (111-158)||(36213396-36213443)
chr4 (333-378)||(39480451-39480496)
chr4 (111-171)||(29283372-29283431)
chr4 (184-252)||(36213454-36213521)
chr4 (111-155)||(38052595-38052638)
chr4 (327-379)||(52458870-52458922)
chr4 (327-379)||(52460127-52460179)
chr4 (448-559)||(56366889-56366999)
chr4 (658-692)||(6261489-6261523)
chr4 (113-171)||(17647962-17648019)
chr4 (444-506)||(24612043-24612105)
chr4 (658-692)||(36213921-36213955)
chr4 (447-480)||(51890934-51890967)
chr4 (192-252)||(10095342-10095402)
chr4 (194-234)||(41509528-41509568)
chr4 (194-250)||(55520346-55520402)
[»] chr3 (49 HSPs)
chr3 (422-594)||(10994128-10994300)
chr3 (307-594)||(19156926-19157218)
chr3 (444-594)||(27941495-27941645)
chr3 (444-594)||(53076947-53077097)
chr3 (422-594)||(25071596-25071768)
chr3 (444-594)||(52448118-52448268)
chr3 (317-591)||(15760702-15760981)
chr3 (444-559)||(29713781-29713896)
chr3 (422-560)||(47184918-47185056)
chr3 (448-558)||(1698398-1698508)
chr3 (445-559)||(10993086-10993200)
chr3 (451-559)||(44663338-44663446)
chr3 (448-560)||(11640005-11640117)
chr3 (304-510)||(24927913-24928124)
chr3 (111-252)||(19156736-19156879)
chr3 (444-558)||(30191185-30191298)
chr3 (470-558)||(3918145-3918234)
chr3 (444-561)||(23044908-23045025)
chr3 (444-561)||(31884968-31885085)
chr3 (454-560)||(12893035-12893141)
chr3 (111-171)||(53077370-53077430)
chr3 (496-559)||(53472148-53472211)
chr3 (109-171)||(27941916-27941978)
chr3 (111-252)||(52447788-52447928)
chr3 (110-171)||(23045263-23045323)
chr3 (110-171)||(31885336-31885396)
chr3 (447-558)||(1424675-1424782)
chr3 (110-174)||(10994518-10994582)
chr3 (111-171)||(25071278-25071338)
chr3 (444-558)||(40145441-40145552)
chr3 (444-561)||(6024777-6024894)
chr3 (118-252)||(15760509-15760645)
chr3 (459-548)||(17147208-17147296)
chr3 (111-171)||(6025147-6025206)
chr3 (307-379)||(10994348-10994420)
chr3 (447-558)||(16876891-16876999)
chr3 (494-558)||(4127549-4127612)
chr3 (110-158)||(36640722-36640769)
chr3 (307-379)||(53077166-53077238)
chr3 (333-379)||(52448002-52448048)
chr3 (110-158)||(30376916-30376963)
chr3 (111-158)||(1420207-1420253)
chr3 (448-559)||(6583948-6584059)
chr3 (111-158)||(22917793-22917839)
chr3 (194-245)||(24928166-24928217)
chr3 (450-484)||(4127314-4127348)
chr3 (658-692)||(52448332-52448366)
chr3 (111-171)||(1424344-1424403)
chr3 (194-246)||(53077291-53077343)
[»] scaffold0016 (11 HSPs)
scaffold0016 (317-588)||(89044-89319)
scaffold0016 (444-588)||(87618-87762)
scaffold0016 (317-584)||(88096-88368)
scaffold0016 (317-584)||(88572-88844)
scaffold0016 (110-252)||(89377-89518)
scaffold0016 (110-252)||(87950-88092)
scaffold0016 (110-252)||(88426-88568)
scaffold0016 (110-252)||(88902-89044)
scaffold0016 (110-252)||(87477-87618)
scaffold0016 (317-379)||(87358-87419)
scaffold0016 (317-379)||(87831-87892)
[»] scaffold1266 (1 HSPs)
scaffold1266 (445-559)||(1289-1403)
[»] scaffold0093 (4 HSPs)
scaffold0093 (422-549)||(50881-51008)
scaffold0093 (111-171)||(50565-50625)
scaffold0093 (194-245)||(50656-50707)
scaffold0093 (317-377)||(50771-50831)
[»] scaffold0263 (1 HSPs)
scaffold0263 (448-559)||(18613-18724)
[»] scaffold0178 (1 HSPs)
scaffold0178 (447-559)||(2443-2555)
[»] scaffold0160 (1 HSPs)
scaffold0160 (448-558)||(25097-25207)
[»] scaffold0116 (1 HSPs)
scaffold0116 (450-559)||(40797-40906)
[»] scaffold0743 (2 HSPs)
scaffold0743 (444-558)||(3318-3432)
scaffold0743 (112-158)||(3696-3741)
[»] scaffold0601 (1 HSPs)
scaffold0601 (111-171)||(6428-6488)
[»] scaffold1364 (1 HSPs)
scaffold1364 (498-559)||(873-934)
[»] scaffold0137 (1 HSPs)
scaffold0137 (470-558)||(21455-21544)
[»] scaffold0308 (2 HSPs)
scaffold0308 (111-171)||(12490-12550)
scaffold0308 (308-379)||(12290-12361)
[»] scaffold0002 (1 HSPs)
scaffold0002 (498-559)||(98364-98425)
[»] scaffold0064 (1 HSPs)
scaffold0064 (494-560)||(60538-60606)
[»] scaffold0295 (1 HSPs)
scaffold0295 (126-171)||(4627-4672)
[»] scaffold0229 (1 HSPs)
scaffold0229 (194-250)||(14163-14219)


Alignment Details
Target: chr1 (Bit Score: 450; Significance: 0; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 450; E-Value: 0
Query Start/End: Original strand, 13 - 594
Target Start/End: Complemental strand, 23664674 - 23664087
Alignment:
Q  13 aatatctgatacaagatttgaagtaataatcaatcgttgtccttagtgaaaaatcatttccatctacatggatatcataaaaaatcttgacgtacattca 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23664674 aatatctgatacaagatttgaagtaataatcaatcgttgtccttagtgaaaaatcatttccatctacatggatatcataaaaaatcttgacctacattca 23664575  T
Q  113 gggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtaggggcccnnnnnnnnnttaagctggagggtgtatatagaaatatt 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||    
T  23664574 gggccggccctagggcatacgccacgagtgcgacggcctagggcccttgtcggtaggggcccaaaaaaaaattaagctggagggtgtatatagaaatatt 23664475  T
Q  213 tggattttgggggatatgtataacaaaattctctgaaaagtttaggaatttagggtttaggattttgacatgatatactaatgg-------tctgtttat 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       |||||| ||    
T  23664474 tggattttgggggatatgtataacaaaattctctgaaaagtttaggaatttagggtttaggattttgacatgatatagtaatgggctgaaatctgttaat 23664375  T
Q  306 gtttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaa 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||    
T  23664374 gtttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctataaaaaaaaaaa-ttggttgatcttaa 23664276  T
Q  406 taatatgctcgaaaataagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatc 505  Q
    ||||||||||||||||||||||||| |||||       |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23664275 taatatgctcgaaaataagaaattgatgatatttttttgggccctttgttcctaataatgtgtttcactaatattaaaaatgttgaccatatttattatc 23664176  T
Q  506 caagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23664175 caagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 23664087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 202 - 594
Target Start/End: Original strand, 25094886 - 25095290
Alignment:
Q  202 atagaaatatttggattttgggggatatgtataacaaaattctctgaaaagtttaggaatttagggtttaggattttgacatgatatactaatgg----- 296  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||         
T  25094886 atagaaatatttggattttgggggatatgtatagcaaaattctctgaaaagtttaggagtttagggtttaggattttgacatgatatagtaatgggctga 25094985  T
Q  297 --tctgtttatgtttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttg 394  Q
      |||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||            |||    
T  25094986 aatctgttaatgtttttggcctttttagagagatttgctatatatatcccatgcagcacaaatatttatatatacaccctcctataaaaaaaa----ttg 25095081  T
Q  395 gttgatcttaataatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaa 485  Q
    |||||||||||||||||||||||||||         |||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  25095082 gttgatcttaataatatgctcgaaaatttatcatcgaagaaattggtgatatttttttgggccctttgttcctaataatgtgcttcactaatattaaaaa 25095181  T
Q  486 tgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcg 585  Q
    | |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  25095182 tattgacggtatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatgaggtgttaaaatttcagtctacttcg 25095281  T
Q  586 catgtgcta 594  Q
    |||||||||    
T  25095282 catgtgcta 25095290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 444 - 594
Target Start/End: Complemental strand, 17967453 - 17967303
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17967453 gggccctttgttcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataattttcgtaacaaagcaaattct 17967354  T
Q  544 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  17967353 attttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 17967303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 307 - 594
Target Start/End: Original strand, 21906212 - 21906504
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaat 406  Q
    ||||||||  |||||| |||||||||||||||||||||||| | ||||||  |||||||||||||| || |||            ||||||| |||| ||    
T  21906212 tttttggcccttttagtgagatttgttatatatatcccatgtaacacaaaattttctatatacaccctcatataaaagaat----ttggttgttcttgat 21906307  T
Q  407 aatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatat 497  Q
    ||||||||| |||||         |||||||||||||||       |||||||||| |||||||||||||||||||||||||||||||| | ||| ||||    
T  21906308 aatatgctccaaaatttattatcgaagaaattggtgatatttttttgggccctttgctcctaataatgtgcttcactaatattaaaaatatcgacaatat 21906407  T
Q  498 ttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  21906408 ttattatccaagaaattgggataattttcgtaacaaagcaaattctattttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 21906504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 422 - 594
Target Start/End: Original strand, 5049408 - 5049580
Alignment:
Q  422 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 521  Q
    |||||||||||||||       |||||||||| |||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  5049408 aagaaattggtgatatttttttgggccctttgctcctaataatgtacttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataa 5049507  T
Q  522 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||| ||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  5049508 ttttcgtaacaaagcaaattctattttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 5049580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 422 - 594
Target Start/End: Original strand, 22070456 - 22070628
Alignment:
Q  422 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 521  Q
    |||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| |||||| |||||    
T  22070456 aagaaattggtgatatttttttgggccctttgttcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaaaaaattgagataa 22070555  T
Q  522 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||||||| ||||||||||||||||||||||||| |||||  | ||||||||||||||||||||||||||    
T  22070556 ttttcataacagagcaaattctattttagttgaaaatagggtgctagaatttcagtctacttcgcatgtgcta 22070628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 444 - 594
Target Start/End: Complemental strand, 48596481 - 48596331
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  48596481 gggccctttgttcctaataatgtgcttcattaatattaaaaatatcgacgatatttattatccaagaaattaggataattttcataacaaagcaaattct 48596382  T
Q  544 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||||||||||| | |||  |||||||||||||||||| |||||||||    
T  48596381 attttagttgaaaatagtgtgctaaaatttcagtctacttcacatgtgcta 48596331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 307 - 594
Target Start/End: Complemental strand, 34307717 - 34307425
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaat 406  Q
    ||||||||  |||||| |||||||| ||||||||||||||| | ||||||  |||||||||||||| ||||||            ||||||| |||| ||    
T  34307717 tttttggctcttttagtgagatttgctatatatatcccatgtaacacaaaattttctatatacaccctcctataaaaaaaa----ttggttgttcttgat 34307622  T
Q  407 aatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatat 497  Q
    ||||||||| |||||         |||||||||||||||       |||||||||  |||||||||||||||||||||||||||||||| | ||| ||||    
T  34307621 aatatgctcaaaaatttattatcgaagaaattggtgatatttttttgggccctttactcctaataatgtgcttcactaatattaaaaatatcgacgatat 34307522  T
Q  498 ttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||  ||||||||| |||||||| |||||||||    
T  34307521 ttattattcaagaaattgggataattttcgtaacaaagcaaattctattttagttgaaaatagggtgccaaaatttcattctacttcacatgtgcta 34307425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 447 - 594
Target Start/End: Complemental strand, 27430916 - 27430769
Alignment:
Q  447 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 546  Q
    ||||||| |||||||||||| ||||||||||| ||||||| | ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27430916 ccctttgctcctaataatgtacttcactaatactaaaaatatcgacgatatttattatccaagaaattgggataattttcgtaacaaagcaaattctatt 27430817  T
Q  547 ttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    |||||||||||| |||||  |||||||||||||||||| |||||||||    
T  27430816 ttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 27430769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 422 - 594
Target Start/End: Original strand, 48999356 - 48999526
Alignment:
Q  422 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 521  Q
    |||||||||||||||       |||||||||| ||||||||||||||||||||||||||||| || | ||| ||||||||||||||||||||||||||||    
T  48999356 aagaaattggtgatatttttttgggccctttgctcctaataatgtgcttcactaatattaaacatatcgacgatatttattatccaagaaattgggataa 48999455  T
Q  522 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||| ||||  ||||||||||||||||||||||||| | |||  |||||||||||||||||| |||||||||    
T  48999456 ttttcgtaac--agcaaattctattttagttgaaaatagagtgctaaaatttcagtctacttcacatgtgcta 48999526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 450 - 559
Target Start/End: Complemental strand, 49229460 - 49229351
Alignment:
Q  450 tttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttta 549  Q
    ||||||| |||||||||| |||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  49229460 tttgttcttaataatgtgtttcactaatattaaaaatattgatgatatttattatccaagaaattgggataattttcataacaaaataaattatatttta 49229361  T
Q  550 gttgaaaatg 559  Q
    ||||||||||    
T  49229360 gttgaaaatg 49229351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 447 - 559
Target Start/End: Complemental strand, 5509980 - 5509869
Alignment:
Q  447 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 546  Q
    |||||||||| ||| ||||||||   |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  5509980 ccctttgttcttaaaaatgtgctag-ctaatattaaaaatattggccatatttattatccaagaaattgggataattttcataacaaaataaattctatt 5509882  T
Q  547 ttagttgaaaatg 559  Q
    |||| ||||||||    
T  5509881 ttagatgaaaatg 5509869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 445 - 560
Target Start/End: Original strand, 12027763 - 12027878
Alignment:
Q  445 ggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattcta 544  Q
    |||||||||||||||||||||||||||||||||||||||||| |||   ||||||||| || || |||||  ||| |||||||||||||| ||||||  |    
T  12027763 ggccctttgttcctaataatgtgcttcactaatattaaaaatattggtgatatttattttcgaataaattttgatgattttcataacaaaacaaattaga 12027862  T
Q  545 ttttagttgaaaatgg 560  Q
    ||||||||||||||||    
T  12027863 ttttagttgaaaatgg 12027878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 444 - 558
Target Start/End: Complemental strand, 5209809 - 5209695
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||| ||||||||| ||||| | |||||||| ||||||| || |||   ||||||||||||||| ||||||||||||||||||||||||| |||||| |    
T  5209809 gggccatttgttcctgataattttcttcactactattaaacatattggtgatatttattatccaataaattgggataattttcataacaaaacaaattat 5209710  T
Q  544 attttagttgaaaat 558  Q
    |||||||||||||||    
T  5209709 attttagttgaaaat 5209695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 449 - 559
Target Start/End: Original strand, 9023193 - 9023303
Alignment:
Q  449 ctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttt 548  Q
    |||| ||| ||||||||||| ||||||||||||||||| | ||  |||||||||||||||  |||||||||| |||| |||||||| |||||||||||||    
T  9023193 ctttattcataataatgtgcctcactaatattaaaaatatcgatgatatttattatccaaataattgggatagttttaataacaaaacaaattctatttt 9023292  T
Q  549 agttgaaaatg 559  Q
    |||||||||||    
T  9023293 agttgaaaatg 9023303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 444 - 561
Target Start/End: Original strand, 36296668 - 36296785
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |     ||||||||||||||| ||||||||| |||||||||||| || |||||| |    
T  36296668 gggccctttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccaaaaaattgggagaattttcataaccaaacaaattat 36296767  T
Q  544 attttagttgaaaatggg 561  Q
    ||||||||||||||||||    
T  36296768 attttagttgaaaatggg 36296785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 455 - 561
Target Start/End: Complemental strand, 24185782 - 24185677
Alignment:
Q  455 tcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttga 554  Q
    |||||||||||||  |||||| |||||||||| |||   ||||||||| |||||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  24185782 tcctaataatgtgtctcactattattaaaaatattggtgatatttattgtccaagaaattgggataatttt-ataacaaaacaaattatattttagttga 24185684  T
Q  555 aaatggg 561  Q
    |||||||    
T  24185683 aaatggg 24185677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 444 - 561
Target Start/End: Original strand, 42722203 - 42722320
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||  | |||||||||||||||       ||||||||||||||| ||||||||| |||||||||||| || |||||| |    
T  42722203 gggccctttgttcctaataatgtgtcttactaatattaaaaatacatgtgatatttattatccaaaaaattgggagaattttcataaccaaacaaattat 42722302  T
Q  544 attttagttgaaaatggg 561  Q
    ||||||||||||||||||    
T  42722303 attttagttgaaaatggg 42722320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 444 - 560
Target Start/End: Complemental strand, 28945948 - 28945832
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||||||| |||| |||||||||| |||||| |    
T  28945948 gggccctttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattctcataacaaaacaaattat 28945849  T
Q  544 attttagttgaaaatgg 560  Q
    |||||||||||||||||    
T  28945848 attttagttgaaaatgg 28945832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 450 - 530
Target Start/End: Complemental strand, 47397650 - 47397570
Alignment:
Q  450 tttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataa 530  Q
    ||||||||||||||||||| ||||||||||||||||| | ||  ||||||||||||||||||||| |||||||||||||||    
T  47397650 tttgttcctaataatgtgcatcactaatattaaaaatatcgatgatatttattatccaagaaattcggataattttcataa 47397570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 510 - 594
Target Start/End: Original strand, 26465116 - 26465202
Alignment:
Q  510 aaattgggataattttcataacaaa--gcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    |||| ||||||||||| ||||||||  |||||||||||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  26465116 aaatagggataatttttataacaaaaagcaaattctattttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 26465202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 444 - 547
Target Start/End: Original strand, 48646129 - 48646232
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    |||||||| |||  ||||||||||| ||||| ||||||||||| |||   ||||||||||||||| |||||||||||||||||| |||||| |||||| |    
T  48646129 gggcccttagtttataataatgtgcctcactgatattaaaaatattggtgatatttattatccaataaattgggataattttcaaaacaaaacaaattat 48646228  T
Q  544 attt 547  Q
    ||||    
T  48646229 attt 48646232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 5049096 - 5049156
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||    
T  5049096 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggg 5049156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 444 - 560
Target Start/End: Original strand, 26221650 - 26221766
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    |||||||||||||||||||||||   | ||||||||||||||| |     ||||||||||||||| ||||||||| ||| ||||||||||| |||||  |    
T  26221650 gggccctttgttcctaataatgtatcttactaatattaaaaatatatgtgatatttattatccaaaaaattgggagaatcttcataacaaaacaaataat 26221749  T
Q  544 attttagttgaaaatgg 560  Q
    |||||||| ||||||||    
T  26221750 attttagtagaaaatgg 26221766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 444 - 532
Target Start/End: Original strand, 44310430 - 44310518
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataaca 532  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||| |||   ||||| |||||||| ||||||| ||||||||||||||||    
T  44310430 gggccgtttgttcctaataatgtgcctcactaatattgaaaatattggtgatattaattatccatgaaattgagataattttcataaca 44310518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 42721893 - 42721954
Alignment:
Q  109 ttcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  42721893 ttcagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtagggg 42721954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 22070144 - 22070205
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| || |||||||||    
T  22070144 tcagggccggccctagggcataggccgtgagtgcgacggcctagggcccatgccggtagggg 22070205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 458 - 559
Target Start/End: Original strand, 41665592 - 41665692
Alignment:
Q  458 taataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaa 557  Q
    ||||||||||| ||||||||| ||||||  ||||  |||||||||||| |||||||||| | || |||| |||||||| ||||| |||||||||||||||    
T  41665592 taataatgtgcctcactaatactaaaaaa-ttgatgatatttattatctaagaaattggaaaaactttcctaacaaagtaaattatattttagttgaaaa 41665690  T
Q  558 tg 559  Q
    ||    
T  41665691 tg 41665692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 21906021 - 21906081
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| || || |||||||||    
T  21906021 cagggccggccctagggcataggccgcgagtgcgacggcctagggtccatgccggtagggg 21906081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 26221341 - 26221400
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||    
T  26221341 cagggccggccctagg-cataggccgcgagtgcgacggcctagggcccatgtcggtagggg 26221400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 36296358 - 36296417
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  36296358 cagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtagggg 36296417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 444 - 556
Target Start/End: Complemental strand, 12784098 - 12783987
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||| ||||| |||| |||||| ||||||||||||||||| |||    |||||||||||||| |||||| ||||||||| ||| |||| |||||| |    
T  12784098 gggccctatgttcttaattatgtgcctcactaatattaaaaatattggtagtatttattatccaaaaaattgcgataatttt-atagcaaaacaaattat 12784000  T
Q  544 attttagttgaaa 556  Q
    |||| ||| ||||    
T  12783999 atttaagtcgaaa 12783987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 28946260 - 28946201
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||| || |||||||||    
T  28946260 cagggccggccctagg-cataggccacgagtgcgacggcctaaggcccatgccggtagggg 28946201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 48999050 - 48999175
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagg-ggcccnnnnnnnnnttaagct-ggagggtgtatatagaaa 208  Q
    ||||| ||||| ||||||||||||| |||||||||||||||||||||| ||  |||||| |||||         ||||| |  | |||||||||||||||    
T  48999050 cagggtcggccatagggcataggccgcgagtgcgacggcctagggcccatgctggtaggaggcccaaattttttttaaggtaagggggtgtatatagaaa 48999149  T
Q  209 tatttggattttgggggatatgtata 234  Q
    ||||||||||||||||| ||| ||||    
T  48999150 tatttggattttggggggtatatata 48999175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 494 - 559
Target Start/End: Complemental strand, 47559629 - 47559565
Alignment:
Q  494 atatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatg 559  Q
    |||||||||||| || |||||||||||||||| |||||||| |||||| |||||||||| ||||||    
T  47559629 atatttattatcaaaaaaattgggataatttt-ataacaaaacaaattatattttagttaaaaatg 47559565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 317 - 366
Target Start/End: Complemental strand, 48596606 - 48596557
Alignment:
Q  317 ttttagagagatttgttatatatatcccatgcagcacaaatatttctata 366  Q
    |||||| |||||||||||||||||||||||| | ||||||||||||||||    
T  48596606 ttttagtgagatttgttatatatatcccatgtaacacaaatatttctata 48596557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 1347168 - 1347121
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggccc 158  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  1347168 tcagggccggccctagg-cataggccgcgagtgcgacggcctagggccc 1347121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 494 - 558
Target Start/End: Complemental strand, 17385470 - 17385407
Alignment:
Q  494 atatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaat 558  Q
    |||||||||||| | ||||||| || ||||||||||||||| ||||||||||||| |||||||||    
T  17385470 atatttattatcta-gaaattgagacaattttcataacaaaacaaattctatttttgttgaaaat 17385407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 27431252 - 27431192
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||| |||||||||||||||||| |||||| ||||||||||| ||| || |||||||||    
T  27431252 cagggctggccctagggcataggccgcgagtgtgacggcctaggacccatgccggtagggg 27431192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 692
Target Start/End: Original strand, 25095358 - 25095392
Alignment:
Q  658 cagatgttgtctaaaaaacatttatttggtagtga 692  Q
    |||||||||||||||||||||||||||||||||||    
T  25095358 cagatgttgtctaaaaaacatttatttggtagtga 25095392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 246
Target Start/End: Complemental strand, 27431168 - 27431114
Alignment:
Q  192 gagggtgtatatagaaatatttggattttgggggatatgtataacaaaattctct 246  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||  ||||||||||    
T  27431168 gagggtgtatatagaaatatttggatttcgggagatatatatagaaaaattctct 27431114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 44310182 - 44310244
Alignment:
Q  190 tggagggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||||| ||||||||||||||||  |||||||||  || |||| |||||||||||||||||    
T  44310182 tggagggtatatatagaaatatttgatttttggggggaatatatagcaaaattctctgaaaag 44310244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 692
Target Start/End: Original strand, 44310837 - 44310871
Alignment:
Q  658 cagatgttgtctaaaaaacatttatttggtagtga 692  Q
    |||||||||||||||||||||||||||||||||||    
T  44310837 cagatgttgtctaaaaaacatttatttggtagtga 44310871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 48596721 - 48596663
Alignment:
Q  194 gggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    ||||||||||||||||||||||||||  |||||||| ||||  ||||||||||| ||||    
T  48596721 gggtgtatatagaaatatttggatttcaggggatatatatagaaaaattctctgcaaag 48596663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 34307905 - 34307849
Alignment:
Q  114 ggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||| |||||||| |||||||||||||||||||||| || || ||||||    
T  34307905 ggccggccctagg-cataggccgcgagtgcgacggcctagggcccatgccgttagggg 34307849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 17967595 - 17967523
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctat 379  Q
    ||||||||  |||||| |||||||| |||||||||| |||  | |||||| ||||||||||||||| ||||||    
T  17967595 tttttggcccttttagtgagatttgctatatatatctcatataacacaaaaatttctatatacaccctcctat 17967523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 27431061 - 27430989
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctat 379  Q
    ||||||||  |||||| |||||||  ||||||||||||||| | ||||||  |||||||||||||| ||||||    
T  27431061 tttttggcccttttagtgagatttactatatatatcccatgtaacacaaaattttctatatacaccctcctat 27430989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 48596806 - 48596746
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||| |||||||| | ||||||||||||||||| |||| || | |||||||    
T  48596806 cagggccggccctaaggcataggtcgcgagtgcgacggcctagagcccatgccagtagggg 48596746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 9022867 - 9022918
Alignment:
Q  120 ccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||  |||||||| |||||||||||| || |||||||||    
T  9022867 ccctagggcataggccgggagtgcgatggcctagggcccatgccggtagggg 9022918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 692
Target Start/End: Complemental strand, 8737804 - 8737770
Alignment:
Q  658 cagatgttgtctaaaaaacatttatttggtagtga 692  Q
    |||| ||||||||||||||||||||||||||||||    
T  8737804 cagaagttgtctaaaaaacatttatttggtagtga 8737770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 9022943 - 9023000
Alignment:
Q  194 gggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||||||||||||||||||| |||||| || ||| |||| | |||||||||||||||    
T  9022943 gggtgtatatagaaatatttggtttttggagg-tatatatagcgaaattctctgaaaag 9023000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 9956586 - 9956631
Alignment:
Q  112 agggccggccctagggcataggccacgagtgcgacggcctagggccc 158  Q
    ||||||||||||||| || ||||| ||||||||||||||||||||||    
T  9956586 agggccggccctagg-cacaggccgcgagtgcgacggcctagggccc 9956631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 317 - 379
Target Start/End: Original strand, 22070346 - 22070408
Alignment:
Q  317 ttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctat 379  Q
    |||||| |||||||| ||||||||| ||||| | |||||| ||||||||||||| | ||||||    
T  22070346 ttttagtgagatttgctatatatattccatgtaacacaaaaatttctatatacatcctcctat 22070408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 692
Target Start/End: Complemental strand, 23664022 - 23663988
Alignment:
Q  658 cagatgttgtctaaaaaacatttatttggtagtga 692  Q
    |||||||||||||||||| ||||||||||||||||    
T  23664022 cagatgttgtctaaaaaatatttatttggtagtga 23663988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 32179238 - 32179194
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggc 156  Q
    ||||||||||| |||| |||||||| ||||||||||||||||||||    
T  32179238 cagggccggccttagg-cataggccgcgagtgcgacggcctagggc 32179194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 48999240 - 48999310
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctat 379  Q
    ||||||||  |||||| |||||||| ||||||||||||||| | |||||   |||||||||||||| ||||||    
T  48999240 tttttggcccttttagtgagatttgctatatatatcccatgtaacacaa--ttttctatatacaccctcctat 48999310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 5049182 - 5049233
Alignment:
Q  194 gggtgtatatagaaatatttggattttgggggatatgtataacaaaattctct 246  Q
    |||||||||||||||||||||||||| ||||| ||| ||||  ||||||||||    
T  5049182 gggtgtatatagaaatatttggatttcggggg-tatatatagaaaaattctct 5049233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 141; Significance: 1e-73; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 297 - 594
Target Start/End: Original strand, 16729554 - 16729855
Alignment:
Q  297 tctgtttatgtttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggt 396  Q
    |||||| |||||||||||  ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||            |||||    
T  16729554 tctgttaatgtttttggcccttttagagagatttgctatatatatcccatgcagcacaaaaatttctatatacaccctcctataaaaaaa-----ttggt 16729648  T
Q  397 tgatcttaataatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatg 487  Q
    || | ||||||||||||||||||||         |||||||||||||||       ||||||||| ||| |||||||||||||||||||||||||||||     
T  16729649 tgtttttaataatatgctcgaaaatttattatcgaagaaattggtgatatttttttgggcccttttttcttaataatgtgcttcactaatattaaaaata 16729748  T
Q  488 ttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgca 587  Q
    | ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |   |||||||||||||||||||||    
T  16729749 tcgacgatatttattatccaagaaattgggataattttcttaacaaagcaaattctattttagttgaaaatgggctactaaaatttcagtctacttcgca 16729848  T
Q  588 tgtgcta 594  Q
    |||||||    
T  16729849 tgtgcta 16729855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 307 - 594
Target Start/End: Original strand, 45117299 - 45117591
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaat 406  Q
    ||||||||  |||||| |||||||| ||||||||||||||| | |||||| ||||||||||||||| ||||||            ||||||| |||| ||    
T  45117299 tttttggctcttttagtgagatttgctatatatatcccatgtaacacaaaaatttctatatacaccctcctataaaaatat----ttggttgttcttgat 45117394  T
Q  407 aatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatat 497  Q
    ||||||||| |||||         |||||||||||||||       |||||||||||||||||||||||||||| |||||||||||||| | ||| ||||    
T  45117395 aatatgctcaaaaatttattatcgaagaaattggtgatatttttttgggccctttgttcctaataatgtgcttcgctaatattaaaaatatcgacgatat 45117494  T
Q  498 ttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||  |||||||||||||||||||||| |||||    
T  45117495 ttattatccaagaaattgggataattttcataacaaagcaaattatattttagttgaaaatagggtgctaaaatttcagtctacttcgcatttgcta 45117591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 422 - 594
Target Start/End: Original strand, 1981549 - 1981721
Alignment:
Q  422 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 521  Q
    |||||||||||||||       |||| |||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  1981549 aagaaattggtgatatttttttgggctctttgttcctaataatgtgcttcattaatattaaaaatattgacgatatttattatccaagaaattgggataa 1981648  T
Q  522 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| ||| |||||    
T  1981649 ttttcataacaaagcaaattctattttagttgaaaatagggtgctaaaatttcagtctacttcacatatgcta 1981721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 422 - 594
Target Start/End: Original strand, 3762650 - 3762822
Alignment:
Q  422 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 521  Q
    |||||||||||||||       |||||||||||||||||||||||| |||||||||||||||||| |  || ||||||||||||||||||||||||||||    
T  3762650 aagaaattggtgatatttttttgggccctttgttcctaataatgtgtttcactaatattaaaaatatctacgatatttattatccaagaaattgggataa 3762749  T
Q  522 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  3762750 ttttcataacaaagcaaattctattttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 3762822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 307 - 594
Target Start/End: Original strand, 31597354 - 31597647
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaat 406  Q
    ||||||||  |||||| |||||||| ||||||||||||||| | ||||||  |||||||||||||| ||||||            ||||||| |||| ||    
T  31597354 tttttggcccttttagtgagatttgctatatatatcccatgtaacacaaaagtttctatatacaccctcctataaaattttt---ttggttgttcttgat 31597450  T
Q  407 aatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatat 497  Q
    ||||||||| |||||         |||||||||||||||       |||||||||  |||||||||||||||||||||||||||||||| | ||| ||||    
T  31597451 aatatgctcaaaaatttattatcgaagaaattggtgatatttttttgggccctttactcctaataatgtgcttcactaatattaaaaatatcgacgatat 31597550  T
Q  498 ttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||| |||||||| |||||||||    
T  31597551 ttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatagggtgccaaaatttcattctacttcacatgtgcta 31597647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 444 - 594
Target Start/End: Complemental strand, 4432201 - 4432051
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  4432201 gggccgtttgttcctaataatgtacttcactaatattaaaaatattgacaatatttattatccaagaaattgggataattttcataacaaagcaaatttt 4432102  T
Q  544 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||||||||||||  |||  ||||||| ||||||||||||||||||||    
T  4432101 attttagttgaaaatgaagtgctaaaatttaagtctacttcgcatgtgcta 4432051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 447 - 594
Target Start/End: Original strand, 40971420 - 40971567
Alignment:
Q  447 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 546  Q
    |||||||||| |||||||||| |||||||||||||||||| | ||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  40971420 ccctttgttcttaataatgtgtttcactaatattaaaaatatcgacgatatttattatccaagaaattgagataattttcattacaaagcaaattctatt 40971519  T
Q  547 ttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||| ||||||||||||||  |||||||||||||||||| |||||||||    
T  40971520 ttatttgaaaatggggtgctaaaatttcagtctacttcacatgtgcta 40971567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 319 - 594
Target Start/End: Complemental strand, 7263891 - 7263611
Alignment:
Q  319 ttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaataatatgctcgaa 418  Q
    |||| |||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||            ||||||| ||||||||||||| | |||    
T  7263891 ttagtgagatttgctatatatatcccatgcagcacaaaaatttctatatacaccctcctataaaaaaaa----ttggttgttcttaataatatgtttgaa 7263796  T
Q  419 aat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaag 509  Q
    |||         |||||||| ||||||       ||||||||||||| |||||||||||||| |||||||||||||| | ||| ||||||||||||||||    
T  7263795 aatttattatcgaagaaattagtgatattttattgggccctttgttcttaataatgtgcttcgctaatattaaaaatatcgacgatatttattatccaag 7263696  T
Q  510 aaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    |||||| |||||||||||| |||||| ||||||||||||| |||| |||||||||  ||||||||||||| ||||| ||||||||    
T  7263695 aaattgagataattttcattacaaagtaaattctattttatttgataatggggtgctaaaatttcagtctgcttcggatgtgcta 7263611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 297 - 594
Target Start/End: Complemental strand, 7973262 - 7972960
Alignment:
Q  297 tctgtttatgtttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggt 396  Q
    |||||| |||||||||||  |||||| |||||||  ||||||||| |||||  ||||||||||||||||||||||| ||||||            |||||    
T  7973262 tctgttgatgtttttggcccttttagtgagatttactatatatattccatgtggcacaaatatttctatatacaccctcctataatttttt----ttggt 7973167  T
Q  397 tgatcttaataatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatg 487  Q
    || |||||||||||||||| |||||         ||||||||  |||||       ||  |||||||| ||||||||||||||||||||||||||||||     
T  7973166 tgttcttaataatatgctcaaaaatttattatcgaagaaattaatgatatttttttggatcctttgtttctaataatgtgcttcactaatattaaaaata 7973067  T
Q  488 ttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgca 587  Q
    | ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||   |||    
T  7973066 tcgacgatattttttatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgctaaaattttagtttaccatgca 7972967  T
Q  588 tgtgcta 594  Q
    |||||||    
T  7972966 tgtgcta 7972960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 448 - 581
Target Start/End: Original strand, 39906226 - 39906359
Alignment:
Q  448 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 547  Q
    ||||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||| ||||||| |||||||| |||||||||||||||||||||    
T  39906226 cctttgttcctaataatgtgcttcactaatattaaaaatatcgacgttatttattatccaataaattggaataatttttataacaaagcaaattctattt 39906325  T
Q  548 tagttgaaaatggggtgtgaaaatttcagtctac 581  Q
    |||||||||||||||||  |||||||||||||||    
T  39906326 tagttgaaaatggggtgctaaaatttcagtctac 39906359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 444 - 559
Target Start/End: Original strand, 9137509 - 9137625
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattg-ggataattttcataacaaagcaaattc 542  Q
    ||||||||||||||||||||||||  ||||||||||||||||| |||   |||||||||||||||||||||| ||||||||||||||||||| ||||||     
T  9137509 gggccctttgttcctaataatgtgtctcactaatattaaaaatattggtgatatttattatccaagaaattgtggataattttcataacaaaacaaatta 9137608  T
Q  543 tattttagttgaaaatg 559  Q
    |||||||||||||||||    
T  9137609 tattttagttgaaaatg 9137625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 111 - 252
Target Start/End: Complemental strand, 7973442 - 7973299
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg--cccnnnnnnnnnttaagctggagggtgtatatagaaa 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||  ||          ||||| || |||| |||||||||||    
T  7973442 cagggccggccctagggcataggccacgagtgcgacggcctagggcccatgccggtagggggcccaaaagtttttttaaggtgtagggggtatatagaaa 7973343  T
Q  209 tatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    ||||||||||||||||| ||| |||| |||||||||||||||||    
T  7973342 tatttggattttggggggtatatatagcaaaattctctgaaaag 7973299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 447 - 560
Target Start/End: Complemental strand, 9382351 - 9382238
Alignment:
Q  447 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 546  Q
    |||||| ||||||||||||||||||||||||||||||||| |||   ||||||| |||| ||  |||||||||||||||||||||||| |||||| ||||    
T  9382351 ccctttattcctaataatgtgcttcactaatattaaaaatattggtgatatttactatctaatgaattgggataattttcataacaaaacaaattatatt 9382252  T
Q  547 ttagttgaaaatgg 560  Q
    ||||||||||||||    
T  9382251 ttagttgaaaatgg 9382238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 111 - 250
Target Start/End: Original strand, 16729378 - 16729516
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtaggggcccnnnnnnnnnttaagctggagggtgtatatagaaata 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||         |||||||||| ||||||||||||||||    
T  16729378 cagggccggccctagggcataggtcacgagtgcgacggcctagggcccttgccggtaggggcccaaaacaaatttaagctgga-ggtgtatatagaaata 16729476  T
Q  211 tttggattttgggggatatgtataacaaaattctctgaaa 250  Q
    ||||||||| | | | |||||||| ||||| | |||||||    
T  16729477 tttggatttggagcggtatgtatagcaaaactatctgaaa 16729516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 444 - 559
Target Start/End: Complemental strand, 24190474 - 24190359
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    |||| |||||||| ||||| | ||| ||| ||||||||||||| ||||  |||||||||||||||||||||||||||||||| |||||||| |||||| |    
T  24190474 gggctctttgttcataatattatgcctcagtaatattaaaaatattgatgatatttattatccaagaaattgggataatttttataacaaaacaaattat 24190375  T
Q  544 attttagttgaaaatg 559  Q
    ||||||||||||||||    
T  24190374 attttagttgaaaatg 24190359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 450 - 560
Target Start/End: Complemental strand, 11648876 - 11648767
Alignment:
Q  450 tttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttta 549  Q
    ||||||||||||||||||| ||||||||||||||||| |||   |||||||||||| ||||||||| ||||||||| |||||||| |||||| |||||||    
T  11648876 tttgttcctaataatgtgcctcactaatattaaaaatattggtgatatttattatcaaagaaattgagataatttt-ataacaaaacaaattatatttta 11648778  T
Q  550 gttgaaaatgg 560  Q
    |||||||||||    
T  11648777 gttgaaaatgg 11648767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 444 - 558
Target Start/End: Complemental strand, 6927675 - 6927561
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||||||| ||||||||||||||| |||||| |    
T  6927675 gggccctttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattttcataacaaaacaaattat 6927576  T
Q  544 attttagttgaaaat 558  Q
    |||||||||||||||    
T  6927575 attttagttgaaaat 6927561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 444 - 561
Target Start/End: Original strand, 28509226 - 28509343
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||| ||| ||||||||||||||| |||||| |    
T  28509226 gggccctttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattaggagaattttcataacaaaacaaattat 28509325  T
Q  544 attttagttgaaaatggg 561  Q
    ||||||||||||||||||    
T  28509326 attttagttgaaaatggg 28509343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 3762338 - 3762399
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||    
T  3762338 tcagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggg 3762399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 1981234 - 1981294
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||    
T  1981234 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggg 1981294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 7264091 - 7264031
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||    
T  7264091 cagggccggccctagggcataggccacgagtgcgacggtctagggcccttgctggtagggg 7264031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 45117137 - 45117197
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||    
T  45117137 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggg 45117197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 457 - 560
Target Start/End: Original strand, 32073246 - 32073349
Alignment:
Q  457 ctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaa 556  Q
    |||||||||||  ||||||||||||||||| |||   |||||||||||||||||||||| |||||| ||   |||||| | |||| ||||||||||||||    
T  32073246 ctaataatgtgtctcactaatattaaaaatattggtgatatttattatccaagaaattgtgataatctttgcaacaaaacgaattatattttagttgaaa 32073345  T
Q  557 atgg 560  Q
    ||||    
T  32073346 atgg 32073349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 112 - 252
Target Start/End: Original strand, 39905874 - 39906014
Alignment:
Q  112 agggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg-cccnnnnnnnnnttaagctggagggtgtatatagaaata 210  Q
    ||||| ||||||| |||||||||| ||||| |||||||||| |||||||  ||||||||| |||         ||||| ||| |||||||| ||||||||    
T  39905874 agggctggccctacggcataggccgcgagttcgacggcctacggcccttaccggtagggggcccaatttttttttaaggtgg-gggtgtatgtagaaata 39905972  T
Q  211 tttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    ||||||||||||||| ||| |||| ||| |||||||||||||    
T  39905973 tttggattttggggggtatatatagcaacattctctgaaaag 39906014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 40971088 - 40971149
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||  ||||||||    
T  40971088 tcagggccggccctagggcataggccgcgagtgcgatggcctagggcccttgctggtagggg 40971149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 6927983 - 6927924
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  6927983 cagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtagggg 6927924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 252
Target Start/End: Complemental strand, 4432531 - 4432389
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg-cccnnnnnnnnnttaagctggagggtgtatatagaaat 209  Q
    |||||||||||| |||||||||||| | | ||||||||||||||| ||||| |||| |||| |||         ||||| ||| ||||||||||| ||||    
T  4432531 cagggccggcccaagggcataggccgcaattgcgacggcctagggtccttgccggtggggggcccaaaaaacttttaagatggggggtgtatataaaaat 4432432  T
Q  210 atttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||||||||||||| ||| |||| |||| |||  |||||||    
T  4432431 atttggattttggggggtatatatagcaaagttcattgaaaag 4432389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 444 - 561
Target Start/End: Complemental strand, 2879346 - 2879229
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    |||||||||||| ||||||||||   | ||||||||||||||| |     ||||||||||||||  ||||||||| ||| ||||||||||| |||||  |    
T  2879346 gggccctttgtttctaataatgtatcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaatcttcataacaaaacaaataat 2879247  T
Q  544 attttagttgaaaatggg 561  Q
    |||||||| |||||||||    
T  2879246 attttagtagaaaatggg 2879229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 11995159 - 11995100
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||| || |||||||||    
T  11995159 cagggccggccctagg-cataggccacgagtgcgatggcctagggcccatgccggtagggg 11995100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 445 - 560
Target Start/End: Complemental strand, 2807817 - 2807702
Alignment:
Q  445 ggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattcta 544  Q
    |||||||||||| ||||||||||  | ||||||||||||||| ||    ||| ||||||||||  |||||| || ||| |||| ||| || |||||| ||    
T  2807817 ggccctttgttcataataatgtgtcttactaatattaaaaatatttgtgataattattatccagaaaattgtgagaatcttcacaacgaaacaaattata 2807718  T
Q  545 ttttagttgaaaatgg 560  Q
    ||||||||||||||||    
T  2807717 ttttagttgaaaatgg 2807702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 448 - 558
Target Start/End: Original strand, 24682594 - 24682704
Alignment:
Q  448 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 547  Q
    ||||||||||||||||||||  | ||||||||||| ||| ||    |||||||||||| |  ||||||||| ||| |||||||| || |||||| |||||    
T  24682594 cctttgttcctaataatgtgtcttactaatattaagaatatttgtgatatttattatctagaaaattgggaaaatattcataacgaaacaaattatattt 24682693  T
Q  548 tagttgaaaat 558  Q
    |||| ||||||    
T  24682694 tagtcgaaaat 24682704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 4432321 - 4432270
Alignment:
Q  327 atttgttatatatatcccatgcagcacaaatatttctatatacaccttcctat 379  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  4432321 atttgctatatatatcccatgcagcacaaa-atttctatatacaccctcctat 4432270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 31597165 - 31597224
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||| || || ||||||    
T  31597165 cagggccggccctagg-cataggccgcgagtgcgacggcctagggcccatgccgttagggg 31597224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 1981424 - 1981498
Alignment:
Q  307 tttttggcatttttagagagatttgttata--tatatcccatgcagcacaaatatttctatatacaccttcctat 379  Q
    ||||||||  |||||| |||||||| ||||  ||||||||||| | |||||||||||||||||||||| ||||||    
T  1981424 tttttggcccttttagtgagatttgctatatatatatcccatgtaacacaaatatttctatatacaccctcctat 1981498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 448 - 559
Target Start/End: Complemental strand, 28374688 - 28374579
Alignment:
Q  448 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 547  Q
    |||||||| |||| ||||||  ||| ||||||||||||| |||   ||||||||||| ||||||||| | |||||||| ||||| ||  ||||| |||||    
T  28374688 cctttgttgctaagaatgtgtctcattaatattaaaaatattgtg-atatttattattcaagaaatttgaataatttt-ataaccaaataaattatattt 28374591  T
Q  548 tagttgaaaatg 559  Q
    ||||||||||||    
T  28374590 tagttgaaaatg 28374579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 317 - 372
Target Start/End: Original strand, 40971287 - 40971342
Alignment:
Q  317 ttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacacc 372  Q
    |||||| |||||| ||||||||||| |||||||||||||| ||| |||||||||||    
T  40971287 ttttagtgagattcgttatatatattccatgcagcacaaaaattcctatatacacc 40971342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 602316 - 602275
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaa 485  Q
    ||||||||||||| ||||||||||| ||||||||||||||||    
T  602316 gggccctttgttcttaataatgtgcctcactaatattaaaaa 602275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 3509847 - 3509906
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||| |||||||||| |||||||| |||||||||||||||||| ||| |||| |||||||    
T  3509847 cagggtcggccctagg-cataggccgcgagtgcgacggcctaggacccatgtctgtagggg 3509906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 3762530 - 3762602
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctat 379  Q
    ||||||||  |||||| |||||||| ||||||||||  ||| | |||||||||||||||| ||||| ||||||    
T  3762530 tttttggcccttttagtgagatttgctatatatatcatatgtaacacaaatatttctatacacaccctcctat 3762602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 39906051 - 39906121
Alignment:
Q  297 tctgtttatgtttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatac 369  Q
    |||||| |||||||||||  ||| || |||||||| |||||||||| ||||||||||||| ||||||||||||    
T  39906051 tctgttgatgtttttggcccttt-agtgagatttgctatatatatctcatgcagcacaaa-atttctatatac 39906121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 692
Target Start/End: Complemental strand, 7972896 - 7972862
Alignment:
Q  658 cagatgttgtctaaaaaacatttatttggtagtga 692  Q
    |||||||| ||||||||||||||||||||||||||    
T  7972896 cagatgttatctaaaaaacatttatttggtagtga 7972862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 18327042 - 18327096
Alignment:
Q  194 gggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctga 248  Q
    ||||||||||||||||| |||||||||||||  | | |||| |||||||||||||    
T  18327042 gggtgtatatagaaatagttggattttggggtgtctatatagcaaaattctctga 18327096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 333 - 379
Target Start/End: Original strand, 18327212 - 18327258
Alignment:
Q  333 tatatatatcccatgcagcacaaatatttctatatacaccttcctat 379  Q
    ||||||||||||||| |||| ||| ||||||||||||||| ||||||    
T  18327212 tatatatatcccatgtagcagaaacatttctatatacaccctcctat 18327258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 446 - 559
Target Start/End: Complemental strand, 23232351 - 23232238
Alignment:
Q  446 gccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataa-caaagcaaattcta 544  Q
    |||||||||| |||||| ||||| || | |||||||||||| |||   |||||||||||  |||||||| |||||| ||| |||| ||||  ||||| ||    
T  23232351 gccctttgtttctaatattgtgcctcgccaatattaaaaatattggtgatatttattattgaagaaattaggataacttt-ataaccaaaataaattata 23232253  T
Q  545 ttttagttgaaaatg 559  Q
    ||||| |||||||||    
T  23232252 ttttaattgaaaatg 23232238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 133 - 171
Target Start/End: Original strand, 28508937 - 28508975
Alignment:
Q  133 gccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||||||||||||| || |||||||||    
T  28508937 gccacgagtgcgacggcctagggcccatgccggtagggg 28508975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 40971173 - 40971231
Alignment:
Q  194 gggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||| |||||||| ||||||||||||| |||| ||| ||||  ||||||||||||||||    
T  40971173 gggtatatatagatatatttggattttagggggtatatatagtaaaattctctgaaaag 40971231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 688
Target Start/End: Original strand, 40971616 - 40971646
Alignment:
Q  658 cagatgttgtctaaaaaacatttatttggta 688  Q
    |||||||||||||||||||||||||||||||    
T  40971616 cagatgttgtctaaaaaacatttatttggta 40971646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 3e-68; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 297 - 594
Target Start/End: Complemental strand, 20395068 - 20394764
Alignment:
Q  297 tctgtttatgtttttggcatttttagagagatttgttatatatat--cccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttg 394  Q
    |||||| ||||||| ||| |||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||| ||||||            |||    
T  20395068 tctgttaatgttttcggcctttttagagagatttgctatatatatatcccatgcagcacaaatatttctatatacaccctcctataaaaaaaa----ttg 20394973  T
Q  395 gttgatcttaataatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaa 485  Q
    |||| || |||||||||||||||||||         |||||||||||||||       ||||||||| ||| ||||||||||||||||||||||||||||    
T  20394972 gttgttcctaataatatgctcgaaaatttattatcgaagaaattggtgatatttttttgggcccttttttcttaataatgtgcttcactaatattaaaaa 20394873  T
Q  486 tgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcg 585  Q
    | | ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||  ||||||||||| |||||||    
T  20394872 tatcgacgatatttattattcaagaaattgggataattttcataacaaagcaaattctattttagttcaaaatgggctgctaaaatttcagtatacttcg 20394773  T
Q  586 catgtgcta 594  Q
    |||||||||    
T  20394772 catgtgcta 20394764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 307 - 591
Target Start/End: Complemental strand, 8389570 - 8389281
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaat 406  Q
    ||||||||  |||||| || ||||  ||||||||||||||| | |||||||||||||||||||||| ||||||            ||||||| |||| ||    
T  8389570 tttttggcccttttagtgaaattttctatatatatcccatgtaacacaaatatttctatatacaccctcctataaaaaaat----ttggttgttcttgat 8389475  T
Q  407 aatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatat 497  Q
    ||||||||| |||||         |||||||||||||||       ||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||    
T  8389474 aatatgctcaaaaatttattatcgaagaaattggtgatatttttttgggccctttgttcctaataatgtgcttcattaatattaaaaatatcgacgatat 8389375  T
Q  498 ttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtg 591  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| ||||||    
T  8389374 ttattatccaagaaatgaggataattttcataacaaagcaaattctattttagttgaaaatagggtgctaaaatttcagtctacttcacatgtg 8389281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 319 - 594
Target Start/End: Complemental strand, 35478236 - 35477956
Alignment:
Q  319 ttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaataatatgctcgaa 418  Q
    |||| |||||| | |||||||||||||||||||||||| ||||||||||||||| ||||||            ||||||| ||||||||||||||| |||    
T  35478236 ttagtgagattcgctatatatatcccatgcagcacaaaaatttctatatacaccctcctataaaaaaaa----ttggttgttcttaataatatgcttgaa 35478141  T
Q  419 aat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaag 509  Q
    |||         |||||||| ||||||       ||||||||||||| |||||||||||||| |||||||||||||| | ||| ||||||||||||||||    
T  35478140 aatttattatcgaagaaattagtgatattttattgggccctttgttcttaataatgtgcttcgctaatattaaaaatatcgacgatatttattatccaag 35478041  T
Q  510 aaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    |||||| |||||||||||| |||||||||||||||||||| |||| |||||||||  ||||||||||||||||||| ||||||||    
T  35478040 aaattgagataattttcattacaaagcaaattctattttatttgataatggggtgctaaaatttcagtctacttcggatgtgcta 35477956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 333 - 594
Target Start/End: Original strand, 13753974 - 13754240
Alignment:
Q  333 tatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaataatatgctcgaaaat---------aa 423  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||            ||||||| ||||||||||||||| ||||||         ||    
T  13753974 tatatatatcccatgcagcacaaaaatttctatatacaccctcctataaaaaaaa----ttggttgttcttaataatatgcttgaaaatttattatcaaa 13754069  T
Q  424 gaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataatt 523  Q
    |||| | ||||||       ||||||||||||| ||||||||||||||||||||||||||||| |  || |||||||||||||||||||||| |||||||    
T  13754070 gaaaatagtgatattttattgggccctttgttcttaataatgtgcttcactaatattaaaaatatcaacgatatttattatccaagaaattgagataatt 13754169  T
Q  524 ttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||| |||||||||||||||||||| |||| |||||||||  ||||||||||||||||||||||||||||    
T  13754170 ttcattacaaagcaaattctattttatttgataatggggtgctaaaatttcagtctacttcgcatgtgcta 13754240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 444 - 594
Target Start/End: Complemental strand, 31072653 - 31072503
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    |||| ||||| |||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31072653 gggcactttgctcctaataatgtacttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataattttcgtaacaaagcaaattct 31072554  T
Q  544 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    |||||||||||||||  ||||| |||||||||||||||||| |||||||||    
T  31072553 attttagttgaaaataaggtgttaaaatttcagtctacttcacatgtgcta 31072503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 319 - 594
Target Start/End: Original strand, 18667213 - 18667493
Alignment:
Q  319 ttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaataatatgctcgaa 418  Q
    |||| |||||||| |||||||||||||||||||||||| ||||||||||||||  ||||||            ||||||  ||||||||||||||| |||    
T  18667213 ttagtgagatttgctatatatatcccatgcagcacaaaaatttctatatacactctcctataaaagaaa----ttggttattcttaataatatgcttgaa 18667308  T
Q  419 aat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaag 509  Q
    |||         |||||||| ||||||       ||||||||||||| ||||||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  18667309 aatttattatcgaagaaattagtgatattttactgggccctttgttcttaataatgtgcttcactaatattaaaaatatcgacaatatttattatccaag 18667408  T
Q  510 aaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    |||||| |||||||||||| ||||||||||||| |||||  || | |||||||||  ||||||||||||||||||||||||||||    
T  18667409 aaattgagataattttcattacaaagcaaattcaatttttttttataatggggtgctaaaatttcagtctacttcgcatgtgcta 18667493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 422 - 594
Target Start/End: Original strand, 4539819 - 4539986
Alignment:
Q  422 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 521  Q
    |||||||||||||||       ||||||||||||| ||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||| |||||    
T  4539819 aagaaattggtgatatttttttgggccctttgttcataataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgagataa 4539918  T
Q  522 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||||||| |||||||||     ||||||||||| |||||  ||||||||||||||||||||||||||||    
T  4539919 ttttcataacagagcaaattc-----tagttgaaaatagggtgctaaaatttcagtctacttcgcatgtgcta 4539986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 451 - 560
Target Start/End: Original strand, 21863581 - 21863690
Alignment:
Q  451 ttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttag 550  Q
    ||||||||||||||||||  |||||||||||||||| |||   ||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  21863581 ttgttcctaataatgtgccccactaatattaaaaatattggtgatatttattattcaagaaattgagataattttcataacaaagcaaattatattttag 21863680  T
Q  551 ttgaaaatgg 560  Q
    ||||||||||    
T  21863681 ttgaaaatgg 21863690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 114 - 252
Target Start/End: Complemental strand, 20395243 - 20395105
Alignment:
Q  114 ggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtaggggc-ccnnnnnnnnnttaagctggagggtgtatatagaaatatt 212  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||  ||         |||||||||||||||||||||||||||||    
T  20395243 ggccagccctagggcataggccacgagtgcgacggcctaggtcccttgccggtagggggtccaaaaaaaatttaagctggagggtgtatatagaaatatt 20395144  T
Q  213 tggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    ||||||||||||| |||||||| ||| |||||||||||||    
T  20395143 tggattttggggg-tatgtatagcaacattctctgaaaag 20395105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 476 - 594
Target Start/End: Original strand, 1623572 - 1623689
Alignment:
Q  476 atattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttca 575  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||  |||||||||    
T  1623572 atattaaaaatatcgacaatatttattatccaagaaattgggataattttcgtaacaaagcaaattcta-tttagttgaaaatagggtgctaaaatttca 1623670  T
Q  576 gtctacttcgcatgtgcta 594  Q
     | |||||| |||||||||    
T  1623671 ttatacttcacatgtgcta 1623689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 444 - 561
Target Start/End: Complemental strand, 39039020 - 39038903
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||| |||   ||||||||| ||||||||||||||||||||||| ||||||| |||||| |    
T  39039020 gggccctttattcctcataatgtgcctcactaatattaaaaatattggtgatatttattgtccaagaaattgggataattttcgtaacaaaacaaattat 39038921  T
Q  544 attttagttgaaaatggg 561  Q
    ||||||||| ||||||||    
T  39038920 attttagttaaaaatggg 39038903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 448 - 559
Target Start/End: Complemental strand, 24442052 - 24441941
Alignment:
Q  448 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 547  Q
    ||||||||||||||||||||||  ||||||||||||||| |||   ||||||||||||||| |||||||||||||||| |||||||| |||||| |||||    
T  24442052 cctttgttcctaataatgtgctcaactaatattaaaaatattggtgatatttattatccaataaattgggataattttaataacaaaacaaattatattt 24441953  T
Q  548 tagttgaaaatg 559  Q
    | ||||||||||    
T  24441952 ttgttgaaaatg 24441941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 449 - 560
Target Start/End: Complemental strand, 41822259 - 41822148
Alignment:
Q  449 ctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttt 548  Q
    |||| ||||||||||||||| ||||||||||||||||| ||||  ||||||||||||||||||||| |||||||||||||||||||  ||||| |||| |    
T  41822259 cttttttcctaataatgtgcctcactaatattaaaaatattgatgatatttattatccaagaaatttggataattttcataacaaaataaattatattat 41822160  T
Q  549 agttgaaaatgg 560  Q
    |||| |||||||    
T  41822159 agttaaaaatgg 41822148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 447 - 560
Target Start/End: Complemental strand, 29637017 - 29636904
Alignment:
Q  447 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 546  Q
    |||||| || |||||||||||  | ||||||||||||||| ||||  ||||||||||||||| |||||||||||||||||| |||||| |||||| ||||    
T  29637017 ccctttatttctaataatgtgtctgactaatattaaaaatattgatgatatttattatccaataaattgggataattttcaaaacaaaacaaattatatt 29636918  T
Q  547 ttagttgaaaatgg 560  Q
    ||||||||||||||    
T  29636917 ttagttgaaaatgg 29636904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 40934025 - 40934140
Alignment:
Q  445 ggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattcta 544  Q
    |||| |||| |||||||||||||  ||||||||||||||||| |||| |||||||||||||||||||||| |||||||||| |||||||| |||||| |     
T  40934025 ggccatttgctcctaataatgtgtctcactaatattaaaaatattgatcatatttattatccaagaaatttggataatttt-ataacaaaacaaattatg 40934123  T
Q  545 ttttagttgaaaatggg 561  Q
    |||||||||||| ||||    
T  40934124 ttttagttgaaattggg 40934140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 109 - 252
Target Start/End: Complemental strand, 8389762 - 8389617
Alignment:
Q  109 ttcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggta-ggggcccnnnnnnnnnttaagct-ggagggtgtatataga 206  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| |||||||         ||||| |  | |||||||||||||    
T  8389762 ttcagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggggcccaaaaaatctttaaggtaagggggtgtatataga 8389663  T
Q  207 aatatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    ||||||||||||| ||||||||||||||  ||||||||||| ||||    
T  8389662 aatatttggatttcgggggatatgtatagaaaaattctctgtaaag 8389617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 18667009 - 18667072
Alignment:
Q  108 attcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18667009 attcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgccggtagggg 18667072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 449 - 559
Target Start/End: Complemental strand, 43179548 - 43179439
Alignment:
Q  449 ctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttt 548  Q
    |||||||||||||||||| | ||||||||||| |||||  ||   |||||||||||||||||||||||||||||||| |||||||| |||||| ||||||    
T  43179548 ctttgttcctaataatgtacctcactaatattgaaaatactggtgatatttattatccaagaaattgggataatttt-ataacaaaacaaattatatttt 43179450  T
Q  549 agttgaaaatg 559  Q
    |||| ||||||    
T  43179449 agttaaaaatg 43179439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 444 - 561
Target Start/End: Original strand, 48636668 - 48636785
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||  | |||||||||||||||       ||||||||||||||| ||||||||| |||||||||||| || |||||| |    
T  48636668 gggccctttgttcctaataatgtgtcttactaatattaaaaatacatgtgatatttattatccaaaaaattgggagaattttcataaccaaacaaattat 48636767  T
Q  544 attttagttgaaaatggg 561  Q
    ||||||||||||||||||    
T  48636768 attttagttgaaaatggg 48636785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 444 - 561
Target Start/End: Complemental strand, 6189532 - 6189415
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||||||| |||| || ||||||| |||||| |    
T  6189532 gggccctttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattctcttaacaaaacaaattat 6189433  T
Q  544 attttagttgaaaatggg 561  Q
    ||||||||||||||||||    
T  6189432 attttagttgaaaatggg 6189415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 444 - 520
Target Start/End: Original strand, 5770852 - 5770928
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggata 520  Q
    ||||||||||||||||||||||||  ||||||||||||||||| |||   |||||||||||||||||||||||||||    
T  5770852 gggccctttgttcctaataatgtgtctcactaatattaaaaatattggtgatatttattatccaagaaattgggata 5770928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 452 - 559
Target Start/End: Original strand, 44733619 - 44733725
Alignment:
Q  452 tgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagt 551  Q
    |||| |||||||||||  ||||||||||| ||||| | ||  |||||||||||||||||||| | ||||||||||||||||||  |||||||| ||||||    
T  44733619 tgtttctaataatgtgtgtcactaatattgaaaatatcgatgatatttattatccaagaaat-gagataattttcataacaaaataaattctaatttagt 44733717  T
Q  552 tgaaaatg 559  Q
    ||||||||    
T  44733718 tgaaaatg 44733725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 444 - 561
Target Start/End: Original strand, 48238426 - 48238542
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||  | ||||| ||||||||| |     ||||||||||||||  ||||||| | ||||||||||||||| |||||| |    
T  48238426 gggccctttgttcctaataatgtgtcttactaa-attaaaaatatatgtgatatttattatccagaaaattggaagaattttcataacaaaacaaattat 48238524  T
Q  544 attttagttgaaaatggg 561  Q
    ||||||||||||||||||    
T  48238525 attttagttgaaaatggg 48238542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 13753759 - 13753819
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||    
T  13753759 cagggccggccctagggcataggccgcgagtgcgacagcctagggcccttgccggtagggg 13753819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 110 - 252
Target Start/End: Complemental strand, 35478437 - 35478295
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggta-ggggcccnnnnnnnnnttaagctggagggtgtatatagaaa 208  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||| ||||||  |||| |||||||         ||||||| |||||||| ||||||||    
T  35478437 tcagggccagccctagggcataggccgcgagtgcgacggactaggacccttgctggtagggggcccaaaaaaaatttaagct-gagggtgtttatagaaa 35478339  T
Q  209 tatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||||||||| |||| ||| ||||  |||||||||| |||||    
T  35478338 tatttggattttagggggtatatatagtaaaattctctaaaaag 35478295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 43823964 - 43824024
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||    
T  43823964 cagggccggtcctagggcataggccacgagtgcgacggcctagggcccatgccggtagggg 43824024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 452 - 558
Target Start/End: Complemental strand, 8604718 - 8604612
Alignment:
Q  452 tgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagt 551  Q
    ||||||||||||||||||||||||||||||| ||| |||  |||| ||||||||||| ||| ||||| | |||| ||||| ||  ||||| ||||||| |    
T  8604718 tgttcctaataatgtgcttcactaatattaataatattggtcataattattatccaataaactgggaaattttttataactaaataaattatattttatt 8604619  T
Q  552 tgaaaat 558  Q
    |||||||    
T  8604618 tgaaaat 8604612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 444 - 561
Target Start/End: Original strand, 8069546 - 8069663
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    |||||||||||||||||||| |||  | | ||| ||||||||| |     ||||||||||||||  ||||||||| |||| |||||||||| |||||| |    
T  8069546 gggccctttgttcctaataacgtgtcttattaaaattaaaaatatatgtgatatttattatccagaaaattgggagaattctcataacaaaacaaattat 8069645  T
Q  544 attttagttgaaaatggg 561  Q
    ||||||||||||||||||    
T  8069646 attttagttgaaaatggg 8069663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 462 - 558
Target Start/End: Complemental strand, 8114024 - 8113930
Alignment:
Q  462 aatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaat 558  Q
    |||||| |||| ||||||||||||| |||   ||||||||||||||| || ||||| |||||||||||||||  |||||| ||||||||||||||||    
T  8114024 aatgtgtttcattaatattaaaaatattggtgatatttattatccaataagttggggtaattttcataacaa--caaattatattttagttgaaaat 8113930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 4539512 - 4539572
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || ||| |||||    
T  4539512 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccgggagggg 4539572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 8069234 - 8069293
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  8069234 cagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtagggg 8069293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 48238116 - 48238175
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  48238116 cagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtagggg 48238175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 48636360 - 48636419
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  48636360 cagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtagggg 48636419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 496 - 559
Target Start/End: Original strand, 9420482 - 9420545
Alignment:
Q  496 atttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatg 559  Q
    ||||||||||||||||||| |||| ||||||||||||||  ||||| |||||||||||||||||    
T  9420482 atttattatccaagaaattaggattattttcataacaaaataaattttattttagttgaaaatg 9420545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 444 - 514
Target Start/End: Complemental strand, 47522485 - 47522415
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaatt 514  Q
    ||||| ||||||  ||||||||||  |||||||||||||| |||||| |||||||||||||||||||||||    
T  47522485 gggccatttgtttttaataatgtgtctcactaatattaaatatgttggccatatttattatccaagaaatt 47522415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 470 - 561
Target Start/End: Complemental strand, 28460345 - 28460255
Alignment:
Q  470 tcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggg 561  Q
    |||||| |||||||||| |||   |||||||||||||||||| || ||||||||||  ||||||| |||||  |||||||||||||||||||    
T  28460345 tcactagtattaaaaatattggtgatatttattatccaagaagtttggataatttt-ttaacaaaacaaatgatattttagttgaaaatggg 28460255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 447 - 561
Target Start/End: Original strand, 135632 - 135746
Alignment:
Q  447 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 546  Q
    |||||| |||||||||| |||  | ||||||||||||||| ||    ||||||||||||||  ||||||||| ||| |||| ||| || |||||| ||||    
T  135632 ccctttattcctaataaggtgtcttactaatattaaaaatatttgtaatatttattatccagaaaattgggagaatcttcacaactaaacaaattatatt 135731  T
Q  547 ttagttgaaaatggg 561  Q
    ||| |||||||||||    
T  135732 ttaattgaaaatggg 135746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 31072994 - 31072929
Alignment:
Q  105 tacattcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||| ||||||||||||||||| |||||||| |||||||||||||||||||||| |  |||||||||    
T  31072994 tacaatcagggccggccctagg-cataggccgcgagtgcgacggcctagggcccatcccggtagggg 31072929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 549
Target Start/End: Complemental strand, 3124354 - 3124281
Alignment:
Q  476 atattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttta 549  Q
    ||||||||||| | ||  |||||||||||||| ||||||| |||| ||||||||||||| |||||| |||||||    
T  3124354 atattaaaaatatcgatgatatttattatccaggaaattgagatatttttcataacaaaacaaattttatttta 3124281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 470 - 558
Target Start/End: Complemental strand, 35118348 - 35118263
Alignment:
Q  470 tcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaat 558  Q
    |||||||||||||| || |||  |||||||||||||||| |||||  || |||||| |||||||| |||||| ||||||||||||||||    
T  35118348 tcactaatattaaatatattggtcatatttattatccaataaatt--gagaatttt-ataacaaaacaaattatattttagttgaaaat 35118263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 444 - 557
Target Start/End: Original strand, 36628434 - 36628547
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    |||||||||||| ||||| |||||  ||||||||  ||||||| |||   |||||||||||||||||||||| || |||  |||||| ||| ||||   |    
T  36628434 gggccctttgttactaatcatgtgtctcactaattataaaaatattggtaatatttattatccaagaaattgcgagaatcatcataaaaaaacaaacgat 36628533  T
Q  544 attttagttgaaaa 557  Q
    ||||||||||||||    
T  36628534 attttagttgaaaa 36628547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 474 - 558
Target Start/End: Complemental strand, 45446166 - 45446083
Alignment:
Q  474 taatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaat 558  Q
    ||||||||||||| |||| |||||| || |||||||||||||  ||||| || |||| ||| |||||| ||||||||||||||||    
T  45446166 taatattaaaaatattgatcatatt-atcatccaagaaattgaaataatatttataagaaaacaaattatattttagttgaaaat 45446083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 15680168 - 15680122
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggccc 158  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  15680168 cagggccggccctagg-cataggccgcgagtgcgacggcctagggccc 15680122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 692
Target Start/End: Complemental strand, 20394700 - 20394666
Alignment:
Q  658 cagatgttgtctaaaaaacatttatttggtagtga 692  Q
    |||||||||||||||||||||||||||||||||||    
T  20394700 cagatgttgtctaaaaaacatttatttggtagtga 20394666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 6189830 - 6189785
Alignment:
Q  126 ggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||||||||||||||||||| || | |||||||    
T  6189830 ggcataggccacgagtgcgacggcctagggcccatgccagtagggg 6189785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 19312389 - 19312329
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||| ||||||||  |||||||||||||||||| || || |||||||||    
T  19312389 tcagggccggccctagg-cataggccgtgagtgcgacggcctagggtccatgccggtagggg 19312329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 43824055 - 43824112
Alignment:
Q  195 ggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    ||||||||||||||||||||||||||||||| ||| ||||  |  |||||||||||||    
T  43824055 ggtgtatatagaaatatttggattttggggggtatatatagaagtattctctgaaaag 43824112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 44733170 - 44733219
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggccctt 160  Q
    ||||||||||||||||||||||| |  ||||||||||||||| |||||||    
T  44733170 cagggccggccctagggcataggtcgggagtgcgacggcctaaggccctt 44733219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 37549234 - 37549175
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||| ||||||||| | ||||||||||||||||||| || | |||||||    
T  37549234 cagggccggccctagg-cataggccaggggtgcgacggcctagggcccatgcccgtagggg 37549175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 43179800 - 43179744
Alignment:
Q  194 gggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctgaaa 250  Q
    ||||| |||||||||||||||||||||||| | | ||||||||||| ||| ||||||    
T  43179800 gggtgcatatagaaatatttggattttgggaggtgtgtataacaaagttcactgaaa 43179744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 379
Target Start/End: Original strand, 4539711 - 4539771
Alignment:
Q  317 ttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctat 379  Q
    |||||| |||||||| ||||||||||||||| | |||||  ||||||||||||||| ||||||    
T  4539711 ttttagtgagatttgctatatatatcccatgtaacacaa--atttctatatacaccctcctat 4539771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 448 - 559
Target Start/End: Complemental strand, 10015857 - 10015747
Alignment:
Q  448 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 547  Q
    ||||||||| ||||||||||  ||||||||  ||||| | |||   |||||||||||| ||||||||| || ||| ||| ||||||| ||||   |||||    
T  10015857 cctttgttcttaataatgtgtctcactaattataaaa-tattggtaatatttattatctaagaaattgtgagaatcttcgtaacaaaacaaacgatattt 10015759  T
Q  548 tagttgaaaatg 559  Q
    ||||||||||||    
T  10015758 tagttgaaaatg 10015747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 12379303 - 12379349
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggccc 158  Q
    |||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  12379303 cagggccggcccaagg-cataggccgcgagtgcgacggcctagggccc 12379349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 13753843 - 13753901
Alignment:
Q  194 gggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||| ||||||| |||||||||||| |||| ||| ||||  ||||||||||||||||    
T  13753843 gggtgtttatagaagtatttggatttttgggggtatatatagtaaaattctctgaaaag 13753901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 18667096 - 18667154
Alignment:
Q  194 gggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||| |||||||||||||||||||| |||| ||| ||||  || |||||||||||||    
T  18667096 gggtgtttatagaaatatttggattttagggggtatatatagtaacattctctgaaaag 18667154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 135356 - 135416
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||| |||||| |  ||||||||||||||||||||| || | |||||||    
T  135356 tcagggccggccctagg-cataggtcgggagtgcgacggcctagggcccatgcctgtagggg 135416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 659 - 692
Target Start/End: Original strand, 13754305 - 13754338
Alignment:
Q  659 agatgttgtctaaaaaacatttatttggtagtga 692  Q
    ||||||| ||||||||||||||||||||||||||    
T  13754305 agatgttatctaaaaaacatttatttggtagtga 13754338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 526
Target Start/End: Original strand, 23381092 - 23381161
Alignment:
Q  457 ctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttc 526  Q
    |||||||| ||  ||||||||||||||||| | |   |||||||| |||||| |||||||||||||||||    
T  23381092 ctaataatatgtctcactaatattaaaaatatcggtgatatttatcatccaaaaaattgggataattttc 23381161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 252
Target Start/End: Original strand, 44733259 - 44733311
Alignment:
Q  199 tatatagaaatatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||| |||||||||| |||||||| |||| || |||||||||||||||||||    
T  44733259 tatataaaaatatttggtttttgggg-atatatagaacaaaattctctgaaaag 44733311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 45446491 - 45446446
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggc 156  Q
    |||||||||||||||| |||||||| |||||| |||| ||||||||    
T  45446491 cagggccggccctaggccataggccgcgagtgtgacgacctagggc 45446446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 10016190 - 10016127
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtaggggccc 174  Q
    ||||||||||||||||| ||||||||    ||||||||||||||||||| || | ||||||||||    
T  10016190 tcagggccggccctagg-cataggccggaggtgcgacggcctagggcccatgcccgtaggggccc 10016127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 194 - 222
Target Start/End: Complemental strand, 31072902 - 31072874
Alignment:
Q  194 gggtgtatatagaaatatttggattttgg 222  Q
    |||||||||||||||||||||||||||||    
T  31072902 gggtgtatatagaaatatttggattttgg 31072874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 130; Significance: 5e-67; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 297 - 591
Target Start/End: Original strand, 1422778 - 1423077
Alignment:
Q  297 tctgtttatgtttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggt 396  Q
    |||||| ||||||||||| ||||||| |||||||| ||||||||||||||||||||||||  |||||||||||||| ||||||            |||||    
T  1422778 tctgttaatgtttttggcctttttagtgagatttgctatatatatcccatgcagcacaaaactttctatatacaccctcctataaattttt----ttggt 1422873  T
Q  397 tgatcttaataatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatg 487  Q
    || ||||||||||||||||||||||         |||||||||||||||       ||||||||||||||| |||| ||| ||||||||||||||||||     
T  1422874 tgttcttaataatatgctcgaaaatttattatcgaagaaattggtgatatttttttgggccctttgttcctgataacgtgtttcactaatattaaaaata 1422973  T
Q  488 ttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgca 587  Q
    ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||   |||||||||||||| ||| ||    
T  1422974 ttgatgatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaattgggtactaaaatttcagtctagttctca 1423073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 297 - 591
Target Start/End: Original strand, 18675176 - 18675475
Alignment:
Q  297 tctgtttatgtttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggt 396  Q
    |||||| |||||||||||  |||||| |||||||| ||||||||||| |||||| ||||| ||||||||||||| | |||| |            |||||    
T  18675176 tctgttaatgtttttggcccttttagtgagatttgctatatatatcctatgcagtacaaaaatttctatatacatcctcctgtaaaacaat----ttggt 18675271  T
Q  397 tgatcttaataatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatg 487  Q
    || ||||||||||||||||||||||         |||||||||||||||       |||||||||||||||||||| ||| ||||||||||||||||||     
T  18675272 tgttcttaataatatgctcgaaaatttatcgtcgaagaaattggtgatatttttttgggccctttgttcctaataacgtgtttcactaatattaaaaata 18675371  T
Q  488 ttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgca 587  Q
    ||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||    
T  18675372 ttgtcgatatttattatccaagaaattaggataattttcataacaaagcaaattctattttagttaaaaatggggtgctaaaatttcagtctacttcgca 18675471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 297 - 590
Target Start/End: Original strand, 1131596 - 1131895
Alignment:
Q  297 tctgtttatgtttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggt 396  Q
    |||||| ||||||||| |  ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||            |||||    
T  1131596 tctgttaatgtttttgacccttttagagagatttgctatatatatcccatgcagcacaaaaatttctatatacaccctcctataaaaaaaa----ttggt 1131691  T
Q  397 tgatcttaataatatgctcgaaaat---------aagaaattggtgatannnnnnnggg-ccctttgttcctaataatgtgcttcactaatattaaaaat 486  Q
    || ||||||||||||||||||||||         |||||||||||||||       ||| |||||| ||| | |||||||||||||||||||||||||||    
T  1131692 tgttcttaataatatgctcgaaaatttattatcgaagaaattggtgatatttttttggggcccttttttcttgataatgtgcttcactaatattaaaaat 1131791  T
Q  487 gttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgc 586  Q
     | ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  || ||||||||| |||||||| |    
T  1131792 atcgacgatatttattatccaagaaattgggataattttcataataaagcaaattctattttagttgaaaatgggccgttaaaatttcaatctacttcac 1131891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 333 - 594
Target Start/End: Original strand, 34043403 - 34043669
Alignment:
Q  333 tatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaataatatgctcgaaaat---------aa 423  Q
    ||||||||||||||| | |||||||||||||||||||||| ||||||            ||||||| |||| ||||||||||| |||||         ||    
T  34043403 tatatatatcccatgtaacacaaatatttctatatacaccctcctataaattttt----ttggttgttcttgataatatgctcaaaaatttattatcgaa 34043498  T
Q  424 gaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataatt 523  Q
    |||||||||||||       ||||||||||||||||||||||| ||||| ||||||||||||| | ||| |||||||||||||||||||| |||||||||    
T  34043499 gaaattggtgatatttttttgggccctttgttcctaataatgttcttcattaatattaaaaatatcgacgatatttattatccaagaaatggggataatt 34043598  T
Q  524 ttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  34043599 ttcataacaaagcaaattctattttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 34043669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 307 - 594
Target Start/End: Complemental strand, 22012385 - 22012095
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaat 406  Q
    |||||||| ||||||| |||||||| ||||||||||||||| | |||||| ||||||||||||||| |||| |            ||||||| |||| ||    
T  22012385 tttttggcctttttagtgagatttgctatatatatcccatgtaacacaaaaatttctatatacaccctcctgt----aaaaaaatttggttgttcttgat 22012290  T
Q  407 aatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatat 497  Q
    ||||||||| |||||         ||||||||||||||        |||||||||||||||||| |||||||||| ||||||||||||| | ||| ||||    
T  22012289 aatatgctcaaaaatttattatcgaagaaattggtgat--ttttttgggccctttgttcctaattatgtgcttcattaatattaaaaatatcgacgatat 22012192  T
Q  498 ttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| ||| |||||    
T  22012191 ttattatccaagaaattgagataattttcataacaaagcaaattctattttagttgaaaatagggtgctaaaatttcagtctacttcacatatgcta 22012095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 307 - 594
Target Start/End: Original strand, 1603203 - 1603494
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaat 406  Q
    ||||||||  |||||| |||||||  ||||||||||||||| | |||||||||||||||||||||| ||||||            ||||||| |||| ||    
T  1603203 tttttggcccttttagtgagattttctatatatatcccatgtaacacaaatatttctatatacaccctcctataaaaaaat----ttggttgttcttgat 1603298  T
Q  407 aatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatat 497  Q
    ||||||||  |||||         |||||||||||||||       ||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||    
T  1603299 aatatgcttaaaaatttattatcgaagaaattggtgatatttttttgggccctttgttcctaataatgtgcttcattaatattaaaaatatcgacgatat 1603398  T
Q  498 ttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||  ||||  |||||||||||||||||| |||||||||    
T  1603399 ttattatccaagaaatgaggataattttcataacaaagcaaattcta-tttagttgaaaatatggtgctaaaatttcagtctacttcacatgtgcta 1603494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 318 - 594
Target Start/End: Original strand, 20990281 - 20990564
Alignment:
Q  318 tttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaataatatgctcga 417  Q
    ||||| |||||| | ||||||||| |||||||||||||| ||||||||||||||| ||||||            ||||||| ||||||||||||||| ||    
T  20990281 tttagtgagattcgctatatatattccatgcagcacaaaaatttctatatacaccatcctataaaaaaaa----ttggttgttcttaataatatgcttga 20990376  T
Q  418 aaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaa 508  Q
    ||||         |||||||| ||||||       ||||||||||||| ||||||||||||||||||||||||||||| | ||| |||||||||||||||    
T  20990377 aaatttattatcgaagaaattagtgatattttattgggccctttgttcttaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaa 20990476  T
Q  509 gaaattgggataattttcataacaaagcaaa--ttctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||| |||||||||||| ||||||||||  || ||||||  || | |||||||||  ||||||||||||||||||||||||||||    
T  20990477 gaaattgagataattttcattacaaagcaaattttttatttttttttataatggggtgctaaaatttcagtctacttcgcatgtgcta 20990564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 444 - 559
Target Start/End: Complemental strand, 11680986 - 11680871
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||   ||||||||||||||| ||||||| ||||||||||||||||| |||||| |    
T  11680986 gggcccttttttcctaataatgtgcttcactaatattaaaaatattggtgatatttattatccaataaattggaataattttcataacaaaacaaattat 11680887  T
Q  544 attttagttgaaaatg 559  Q
    ||||||||||||||||    
T  11680886 attttagttgaaaatg 11680871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 494 - 594
Target Start/End: Original strand, 21442662 - 21442762
Alignment:
Q  494 atatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgct 593  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||  |||||||||| ||||||||    
T  21442662 atatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatagggtgctaaaattctagtctacttcacatgtgct 21442761  T
Q  594 a 594  Q
    |    
T  21442762 a 21442762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 444 - 559
Target Start/End: Original strand, 31129720 - 31129834
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||| ||||||||||| |||||| |||||||||| ||||  |||||||||||| |||||||||||||||||||||||||||| | ||||      
T  31129720 gggccctttgttcttaataatgtgcctcactagtattaaaaatattgatgatatttattatcaaagaaattgggataattttcataacaaaac-aattac 31129818  T
Q  544 attttagttgaaaatg 559  Q
    ||||||||||||||||    
T  31129819 attttagttgaaaatg 31129834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 444 - 558
Target Start/End: Original strand, 15060141 - 15060255
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    |||| |||||||| ||||||||||  ||||| ||||||||||| | ||  |||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  15060141 gggcactttgttcataataatgtgtctcactgatattaaaaatatcgatgatatttattatccaagaaattgagataattttcataacaaaacaaattct 15060240  T
Q  544 attttagttgaaaat 558  Q
    ||||||||| |||||    
T  15060241 attttagttaaaaat 15060255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 111 - 225
Target Start/End: Original strand, 1131416 - 1131531
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggta-ggggcccnnnnnnnnnttaagctggagggtgtatatagaaat 209  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||| |||||||         ||||||||||||||||||||||||||    
T  1131416 cagggccggccctagggcataggccaagagtgcgacggcctagagcccttgccggtagggggcccaaaaaaaatttaagctggagggtgtatatagaaat 1131515  T
Q  210 atttggattttggggg 225  Q
    |||||||| |||||||    
T  1131516 atttggatattggggg 1131531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 447 - 558
Target Start/End: Original strand, 26817336 - 26817445
Alignment:
Q  447 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 546  Q
    ||||||||| |||||||||||| | |||||||||| |||| | ||  ||||||||||||||||||||||||||| ||||||||||||  |||||||||||    
T  26817336 ccctttgtttctaataatgtgcctaactaatattacaaatatcgatgatatttattatccaagaaattgggatatttttcataacaa--caaattctatt 26817433  T
Q  547 ttagttgaaaat 558  Q
    ||||||||||||    
T  26817434 ttagttgaaaat 26817445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 444 - 559
Target Start/End: Original strand, 19107911 - 19108026
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||| ||||||| | ||||||||||||||||| |||   ||||||||||||||| |||||||||||||||||| ||||||  ||  | |    
T  19107911 gggccctttgttcctgataatgttcctcactaatattaaaaatattggtgatatttattatccaaaaaattgggataattttcaaaacaaaaaaatatat 19108010  T
Q  544 attttagttgaaaatg 559  Q
    ||||||||||||||||    
T  19108011 attttagttgaaaatg 19108026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 111 - 252
Target Start/End: Original strand, 20990100 - 20990240
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtaggggcccnnnnnnnnnttaagctggagggtgtatatagaaata 210  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||         ||||  | | |||||| ||||||||||    
T  20990100 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccttgccggtaggggcccaaattttttttaatgtag-gggtgtttatagaaata 20990198  T
Q  211 tttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||||||| |||| ||| ||||  || |||||||||||||    
T  20990199 tttggattttagggggtatatatagtaacattctctgaaaag 20990240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 444 - 561
Target Start/End: Complemental strand, 33516755 - 33516638
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||| ||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||||||| ||||||||||||||| |||||| |    
T  33516755 gggccctttgttcataataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattttcataacaaaacaaattat 33516656  T
Q  544 attttagttgaaaatggg 561  Q
    ||||||||||||||||||    
T  33516655 attttagttgaaaatggg 33516638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 111 - 246
Target Start/End: Original strand, 1603013 - 1603150
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggta-ggggcccnnnnnnnnnttaagct-ggagggtgtatatagaaa 208  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| |||| ||         ||||| |  | |||||||||||||||    
T  1603013 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggggtccaaaaaatctttaaggtaagggggtgtatatagaaa 1603112  T
Q  209 tatttggattttgggggatatgtataacaaaattctct 246  Q
    ||||||||||| ||||||||| ||||  ||||||||||    
T  1603113 tatttggatttcgggggatatatatagaaaaattctct 1603150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 451 - 559
Target Start/End: Complemental strand, 4065709 - 4065601
Alignment:
Q  451 ttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttag 550  Q
    |||||| ||||||| ||||||||||||  ||||||| |||   ||||||||||||||||||||||| | | | ||||||||||| |||||  ||||||||    
T  4065709 ttgttcataataatttgcttcactaattataaaaatattggtgatatttattatccaagaaattggaagactcttcataacaaaacaaatgatattttag 4065610  T
Q  551 ttgaaaatg 559  Q
    |||||||||    
T  4065609 ttgaaaatg 4065601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 112 - 252
Target Start/End: Original strand, 18674997 - 18675139
Alignment:
Q  112 agggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg--cccnnnnnnnnnttaagctggagggtgtatatagaaat 209  Q
    ||||||||||||| |||||||||| || |||||||||||||||||||||| |||||||||  ||          ||||| ||| | ||||||||||||||    
T  18674997 agggccggccctaaggcataggccgcgggtgcgacggcctagggcccttgccggtagggggtccaaatttgtttttaaggtggggagtgtatatagaaat 18675096  T
Q  210 atttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    ||||  ||||||||| |||| |||| |||| ||||||||||||    
T  18675097 atttaaattttggggaatatatatagcaaacttctctgaaaag 18675139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 22012575 - 22012515
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||    
T  22012575 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggg 22012515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 454 - 558
Target Start/End: Complemental strand, 3229315 - 3229212
Alignment:
Q  454 ttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttg 553  Q
    ||||||||||||| || |||||| ||||||||| |||   ||||||||||||||||||||  ||||||||||||||||||| |||||| | |  ||||||    
T  3229315 ttcctaataatgtcct-cactaaaattaaaaatattggtgatatttattatccaagaaatgtggataattttcataacaaaacaaattatttcctagttg 3229217  T
Q  554 aaaat 558  Q
    |||||    
T  3229216 aaaat 3229212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 109 - 169
Target Start/End: Complemental strand, 34040470 - 34040410
Alignment:
Q  109 ttcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagg 169  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||| || |||||||    
T  34040470 ttcaaggccggccctagggcatagaccacgagtgcgacggcctagggcccatgccggtagg 34040410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 111 - 252
Target Start/End: Original strand, 34043181 - 34043324
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg-cccnnnnnnnnnttaagctggagg-gtgtatatagaaa 208  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| || ||||||||| |||         ||||| |   || |||||||||||||    
T  34043181 cagggccggccctagggcataggccgcgagtgtgacggcctagggcccatgccggtagggggcccaaaaattttttaaggtaagggagtgtatatagaaa 34043280  T
Q  209 tatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    ||||||||||| ||||| ||| ||||  ||||||||||| ||||    
T  34043281 tatttggatttcgggggttatatatagaaaaattctctgtaaag 34043324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 444 - 558
Target Start/End: Original strand, 12269374 - 12269487
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||  | ||||||||||||||| ||    |||||||||||| || ||||| ||| ||| |||| |||||| |||||| |    
T  12269374 gggccctttgttcctaataatgtgtcttactaatattaaaaatatt-ttgatatttattatctaaaaaattaggagaatcttcacaacaaaacaaattat 12269472  T
Q  544 attttagttgaaaat 558  Q
    ||||||||| |||||    
T  12269473 attttagttaaaaat 12269487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 111 - 252
Target Start/End: Original strand, 21442393 - 21442537
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggta-ggggcccnnnnnnnnnttaagct--ggagggtgtatatagaa 207  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| || || ||||| |||||||         ||||| |  ||  |||||||||||||    
T  21442393 cagggccggccctagagcataggccgcgagtgcgacggcctagggtccatgccggtagggggcccaaattttttttaagataagggaggtgtatatagaa 21442492  T
Q  208 atatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||||||||| ||||||||| ||||  || |||||||| ||||    
T  21442493 atatttggatttcgggggatatatatagaaacattctctgcaaag 21442537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 21442584 - 21442649
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacacc 372  Q
    ||||||||  |||||| |||||||| ||||||||||||||| | ||||||||||||||||||||||    
T  21442584 tttttggcccttttagtgagatttgctatatatatcccatgtaacacaaatatttctatatacacc 21442649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 14677386 - 14677445
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||| || |||||||||    
T  14677386 cagggccggccctagg-cataggccgcgagtgcgacggcctagggcccatgccggtagggg 14677445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 15059811 - 15059871
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||||||| |||  |||||| |||||||||||||| ||||||||||||    
T  15059811 cagggccggccctagggcatatgccgggagtgcaacggcctagggcccatgtcggtagggg 15059871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 26212978 - 26212906
Alignment:
Q  458 taataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataa 530  Q
    ||||||| ||| ||||||||||||||||| | ||  ||||||||||||||||||||  |||||||||||||||    
T  26212978 taataatatgcctcactaatattaaaaatatcgatgatatttattatccaagaaatcaggataattttcataa 26212906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 33517040 - 33516981
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| || |||||||||    
T  33517040 cagggccggccctagg-cataggccacgagtgcaacggcctagggcccatgccggtagggg 33516981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 458 - 557
Target Start/End: Complemental strand, 4090907 - 4090808
Alignment:
Q  458 taataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaa 557  Q
    ||||||||||  |||| |||  ||||||| ||||  |||||||||||||||||||||| || ||| ||||||||||| ||||   |||||||||||||||    
T  4090907 taataatgtgtctcacaaattataaaaatattgataatatttattatccaagaaattgcgagaatcttcataacaaaacaaacgatattttagttgaaaa 4090808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 494 - 534
Target Start/End: Original strand, 22524751 - 22524791
Alignment:
Q  494 atatttattatccaagaaattgggataattttcataacaaa 534  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  22524751 atatttattatccaagaaattgggatgattttcataacaaa 22524791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 31475220 - 31475173
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggccc 158  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  31475220 tcagggccggccctagg-cataggccgcgagtgcgacggcctagggccc 31475173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 1422674 - 1422741
Alignment:
Q  185 taagctggagggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||| ||| |||||||| ||||||||||||||||||||||   || |||| |||||||||||||||||    
T  1422674 taaggtggggggtgtatttagaaatatttggattttggggataatatatagcaaaattctctgaaaag 1422741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 326 - 372
Target Start/End: Complemental strand, 26213114 - 26213068
Alignment:
Q  326 gatttgttatatatatcccatgcagcacaaatatttctatatacacc 372  Q
    |||||| ||||||||||||||| || |||||||||||||||||||||    
T  26213114 gatttgctatatatatcccatgtagtacaaatatttctatatacacc 26213068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 659 - 692
Target Start/End: Original strand, 1131962 - 1131995
Alignment:
Q  659 agatgttgtctaaaaaacatttatttggtagtga 692  Q
    ||||||||||||||||||||||||||||||||||    
T  1131962 agatgttgtctaaaaaacatttatttggtagtga 1131995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 422 - 524
Target Start/End: Complemental strand, 13758928 - 13758826
Alignment:
Q  422 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 521  Q
    |||||||||||||||       ||| ||||||||| |||| ||||||  |||||||||| ||||| | ||| |||||||| || ||| ||||||||||||    
T  13758928 aagaaattggtgatatttttttgggtcctttgttcataattatgtgccccactaatatttaaaatatcgacgatatttataattcaaaaaattgggataa 13758829  T
Q  522 ttt 524  Q
    |||    
T  13758828 ttt 13758826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 26817185 - 26817260
Alignment:
Q  297 tctgtttatgtttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacacc 372  Q
    |||||| |||||||||||  |||||  | |||||  |||||||| || ||| ||||||||||||||||||||||||    
T  26817185 tctgttaatgtttttggccattttaacgtgattttctatatatacccaatgtagcacaaatatttctatatacacc 26817260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 692
Target Start/End: Original strand, 1423144 - 1423178
Alignment:
Q  658 cagatgttgtctaaaaaacatttatttggtagtga 692  Q
    |||||||||||||||||| ||||||||||||||||    
T  1423144 cagatgttgtctaaaaaatatttatttggtagtga 1423178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 111 - 157
Target Start/End: Complemental strand, 9534376 - 9534331
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcc 157  Q
    |||||||||||||||| |||||||| |||||||||||||||| ||||    
T  9534376 cagggccggccctagg-cataggccgcgagtgcgacggcctaaggcc 9534331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 26817090 - 26817147
Alignment:
Q  194 gggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||||||||||||||||| ||||||||||| ||  |||| |||||||||||| ||||    
T  26817090 gggtgtatatagaaatattt-gattttggggggtaaatatagcaaaattctctggaaag 26817147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 26213238 - 26213181
Alignment:
Q  195 ggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||||||||||||||||   |||| |||| ||| |||| |||||||||||||||||    
T  26213238 ggtgtatatagaaatatttaatttttagggggtatatatagcaaaattctctgaaaag 26213181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 194 - 250
Target Start/End: Original strand, 1213000 - 1213056
Alignment:
Q  194 gggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctgaaa 250  Q
    |||||||||||||||||||||  ||||||||| ||| |||| |||| ||| ||||||    
T  1213000 gggtgtatatagaaatatttgatttttggggggtatttatagcaaagttcactgaaa 1213056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 501 - 561
Target Start/End: Original strand, 14677761 - 14677821
Alignment:
Q  501 ttatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggg 561  Q
    |||||||  ||||||| | ||| ||||||||||| |||||  |||||||||||||||||||    
T  14677761 ttatccagaaaattggaagaatcttcataacaaaacaaataatattttagttgaaaatggg 14677821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 1e-64; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 297 - 594
Target Start/End: Complemental strand, 5578886 - 5578587
Alignment:
Q  297 tctgtttatgtttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggt 396  Q
    |||||| |||||||||||  |||||||||||| || ||||||||||||||| |||||||| || |||||||||||| || | |            |||||    
T  5578886 tctgttaatgtttttggcccttttagagagatatgctatatatatcccatgtagcacaaaaatatctatatacaccctcgtgtaaaaaaa-----ttggt 5578792  T
Q  397 tgatcttaataatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatg 487  Q
    || ||  ||||||||||||||||||         |||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||     
T  5578791 tgttc--aataatatgctcgaaaatttattatcaaagaaattggtgatatttttttgggccctttgttcctaataatgtgcttcactaatattaaaaata 5578694  T
Q  488 ttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgca 587  Q
    | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||    
T  5578693 tcgacgatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgctaaaatttcagtctactttgca 5578594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 317 - 594
Target Start/End: Original strand, 13490233 - 13490515
Alignment:
Q  317 ttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaataatatgctcg 416  Q
    |||||| | |||||| |||||||||||||||||||||| | ||||||||| ||||| ||||||            ||||||| |||||||||||||||||    
T  13490233 ttttagtgtgatttgctatatatatcccatgcagcacaca-atttctatacacaccctcctataaaaaaaat---ttggttgttcttaataatatgctcg 13490328  T
Q  417 aaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatcca 507  Q
    |||||         |||||||||||||||       || |||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||    
T  13490329 aaaatttattatcgaagaaattggtgatatttttttggaccctttgttcctaataatgtacttcactaatattaaaaatatcgacaatatttattatcca 13490428  T
Q  508 agaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  13490429 agaaattgagatgattttcataacaaagcaaattctattttagttgaaaatggggtgctaaaatttcagtctacttcgcatgtgcta 13490515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 307 - 594
Target Start/End: Complemental strand, 13382872 - 13382579
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaat 406  Q
    ||||||||  |||||| |||||||| ||||||||||||||| | ||||||  |||||||||||||| ||||||            ||||||| |||| ||    
T  13382872 tttttggcccttttagtgagatttgctatatatatcccatgtaacacaaaattttctatatacaccctcctataaaaaaaaa---ttggttgttcttgat 13382776  T
Q  407 aatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatat 497  Q
    ||||||||| |||||         |||||||||||||||       |||||||||  |||||||||||||||||||||||||||||||| | ||| ||||    
T  13382775 aatatgctcaaaaatttattatctaagaaattggtgatatttttttgggccctttactcctaataatgtgcttcactaatattaaaaatatcgacgatat 13382676  T
Q  498 ttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||  ||||||||| |||||||| |||||||||    
T  13382675 ttattatccaagaaattgggataattttcgtaacaaagcaaattctattttagttgaaaatagggtgccaaaatttcattctacttcacatgtgcta 13382579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 297 - 594
Target Start/End: Complemental strand, 9409833 - 9409531
Alignment:
Q  297 tctgtttatgtttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggt 396  Q
    |||||| |||||||||||  |||||| ||||||| ||||||||||||||||  ||||||||||||||||||||||| ||||||            |||||    
T  9409833 tctgttaatgtttttggcccttttagtgagatttattatatatatcccatgtggcacaaatatttctatatacaccctcctataatttttt----ttggt 9409738  T
Q  397 tgatcttaataatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatg 487  Q
    || |||||||||||||||  |||||         ||||||||  |||||       ||| ||||| |||||||||||||||||||||||||||||||||     
T  9409737 tgttcttaataatatgctaaaaaatttattatcgaagaaattaatgatatttttttgggtccttttttcctaataatgtgcttcactaatattaaaaata 9409638  T
Q  488 ttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgca 587  Q
    | ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||   |||    
T  9409637 tcgacgatattttttatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgctaaaattttagtttaccatgca 9409538  T
Q  588 tgtgcta 594  Q
    |||||||    
T  9409537 tgtgcta 9409531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 317 - 594
Target Start/End: Original strand, 23962693 - 23962975
Alignment:
Q  317 ttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaataatatgctcg 416  Q
    |||||| |||||||| ||||||||||| ||| | |||||| ||||||||||||||| ||||||            ||||||| |||| |||||||||||     
T  23962693 ttttagtgagatttgctatatatatccaatgtaacacaaacatttctatatacaccctcctataaaaaaat----ttggttgttcttgataatatgctca 23962788  T
Q  417 aaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatcca 507  Q
    |||||         |||||||||||||||       |||||||||||||||||||| |||||||| ||||||||||||| |  || ||||||||||||||    
T  23962789 aaaatttattatcgaagaaattggtgatatttttttgggccctttgttcctaataacgtgcttcattaatattaaaaatatcaacgatatttattatcca 23962888  T
Q  508 agaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  23962889 agaaattgagataattttcataacaaagcaaattctattttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 23962975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 307 - 594
Target Start/End: Original strand, 2676798 - 2677089
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaat 406  Q
    ||||||||  |||||| |||||||  ||||||||||||||| | |||||||||||||||||||||| ||||||            ||||||| |||| ||    
T  2676798 tttttggcccttttagtgagattttctatatatatcccatgtaacacaaatatttctatatacaccctcctataaaaaaat----ttggttgttcttgat 2676893  T
Q  407 aatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatat 497  Q
    ||||||||  |||||         |||||||||||||||       ||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||    
T  2676894 aatatgcttaaaaatttattatcgaagaaattggtgatatttttttgggccctttgttcctaataatgtgcttcattaatattaaaaatatcgacgatat 2676993  T
Q  498 ttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||  ||||  |||||||||||||||||| |||||||||    
T  2676994 ttattatccaagaaatgaggataattttcataacaaagcaaattcta-tttagttgaaaatatggtgctaaaatttcagtctacttcacatgtgcta 2677089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 297 - 594
Target Start/End: Original strand, 42879418 - 42879720
Alignment:
Q  297 tctgtttatgtttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggt 396  Q
    |||||| |||||||||||  |||||| |||||||  |||||||||||||||  | ||||||||||||||||||||| ||||||            ||| |    
T  42879418 tctgttaatgtttttggcccttttagtgagatttactatatatatcccatgtggtacaaatatttctatatacaccctcctataacttttt----ttgat 42879513  T
Q  397 tgatcttaataatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatg 487  Q
    || |||||||||||||||| |||||         ||||||||  |||||       ||| ||||| |||||||||||||| ||||||||||||||||||     
T  42879514 tgttcttaataatatgctcaaaaatttattatcgaagaaattaatgatatttttttgggtcctttattcctaataatgtgtttcactaatattaaaaata 42879613  T
Q  488 ttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgca 587  Q
    ||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||| ||| ||||  |||    
T  42879614 ttgacgatattttttatccaagaaattgggataatttttataacaaagcaaattctattttagttgaaaatggggtgctaaaattttagtttactatgca 42879713  T
Q  588 tgtgcta 594  Q
    |||||||    
T  42879714 tgtgcta 42879720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 317 - 589
Target Start/End: Original strand, 18888911 - 18889188
Alignment:
Q  317 ttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaataatatgctcg 416  Q
    |||||| ||||||||||| |||||||||||| | |||||| ||||||||||||||| ||||||            ||||||| |||| |||||||||||     
T  18888911 ttttagtgagatttgttagatatatcccatgtaacacaaaaatttctatatacaccctcctataaaaaaaa----ttggttgttcttgataatatgctca 18889006  T
Q  417 aaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatcca 507  Q
    |||||         |||||||| ||||||       |||||||||| |||||||||||||||||||||||||||||||| | ||| ||||||||||||||    
T  18889007 aaaatttattatcgaagaaatttgtgatatttttttgggccctttgctcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatcca 18889106  T
Q  508 agaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatg 589  Q
    |||||||| |||||||||||||||| || ||| |||| ||||||||||||| |||||  |||||||||||||||||||||||    
T  18889107 agaaattgagataattttcataacagagaaaactctagtttagttgaaaatagggtgctaaaatttcagtctacttcgcatg 18889188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 297 - 594
Target Start/End: Complemental strand, 39537668 - 39537378
Alignment:
Q  297 tctgtttatgtttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggt 396  Q
    ||||||||| ||||||||  ||| || |||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||            ||| |    
T  39537668 tctgtttatttttttggcccttt-agtgagatttgctatatatatcccatgcagcacaaa-atttctatatacaccctcctataaaaaaca----ttgat 39537575  T
Q  397 tgatcttaataatatgctcgaaaata---------agaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatg 487  Q
    || |||||||||||||||||||||||         ||||||||||||||       ||||||||||||||||||||||||||||||| |||||||||||     
T  39537574 tgttcttaataatatgctcgaaaatatattatcgaagaaattggtgatatttttttgggccctttgttcctaataatgtgcttcactgatattaaaaata 39537475  T
Q  488 ttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgca 587  Q
    | |||  ||||||||||| ||          ||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||| |||||||||    
T  39537474 tcgacgctatttattatcgaa----------taattttcataacaaagcaaattttattttagttgaaaatggggtgctaaaatttcagtttacttcgca 39537385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 446 - 558
Target Start/End: Complemental strand, 13826347 - 13826235
Alignment:
Q  446 gccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctat 545  Q
    ||||||||||||||||||||||  ||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13826347 gccctttgttcctaataatgtgtctcactaatattaaaaatatcgatgatatttattatccaagaaattgggataattttcataacaaaacaaattctat 13826248  T
Q  546 tttagttgaaaat 558  Q
    |||||||||||||    
T  13826247 tttagttgaaaat 13826235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 109 - 252
Target Start/End: Complemental strand, 5579068 - 5578923
Alignment:
Q  109 ttcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggta-ggggcccnnnnnnnnnttaagctggagggtgtatatagaa 207  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||         ||||||||||||| ||||||||||    
T  5579068 ttcagggccggccctagggcataggccacgagtgcgacgggctagggcccttgccggtagggggcccaaaaaaaaattaagctggagggcgtatatagaa 5578969  T
Q  208 atatttggattttgg-gggatatgtataacaaaattctctgaaaag 252  Q
    |||||| |||||||| ||| |||||||| ||||||||| |||||||    
T  5578968 atatttagattttggaggggtatgtatatcaaaattctttgaaaag 5578923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 446 - 561
Target Start/End: Original strand, 29789522 - 29789637
Alignment:
Q  446 gccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctat 545  Q
    ||||||||||||||| ||||||| ||||| |||| |||||| | |   ||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  29789522 gccctttgttcctaaaaatgtgcctcactgatataaaaaatatcggtgatatttattatccaagaaattggaataattttcataacaaaacaaattctat 29789621  T
Q  546 tttagttgaaaatggg 561  Q
    ||||||||||||||||    
T  29789622 tttagttgaaaatggg 29789637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 453 - 561
Target Start/End: Complemental strand, 13820989 - 13820881
Alignment:
Q  453 gttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagtt 552  Q
    |||||||||||||||  ||||||| ||||||||| |||  |||||||||||| ||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  13820989 gttcctaataatgtgtctcactaacattaaaaatattggtcatatttattattcaagaaatttggataattttcataacaaaacaaaatctattttagtt 13820890  T
Q  553 gaaaatggg 561  Q
    |||||||||    
T  13820889 gaaaatggg 13820881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 111 - 252
Target Start/End: Original strand, 42879239 - 42879381
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtaggggccc-nnnnnnnnnttaagctggagggtgtatatagaaat 209  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||          ||||| || |||||||||||||||||    
T  42879239 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtaggggcccaaaagtttttttaaggtgtagggtgtatatagaaat 42879338  T
Q  210 atttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    ||||||||||| |||| ||| |||| ||||||| |||||||||    
T  42879339 atttggattttagggggtatatatagcaaaattatctgaaaag 42879381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 111 - 252
Target Start/End: Complemental strand, 9410013 - 9409870
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg--cccnnnnnnnnnttaagctggagggtgtatatagaaa 208  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||  ||          ||||| || |||| |||||||||||    
T  9410013 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgtcggtagggggtccaaaagtttttttaaggtgtagggggtatatagaaa 9409914  T
Q  209 tatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    ||||||||||||||||| ||| |||| ||||||| |||||||||    
T  9409913 tatttggattttggggggtatatatagcaaaattatctgaaaag 9409870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 461 - 559
Target Start/End: Complemental strand, 8806430 - 8806333
Alignment:
Q  461 taatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatg 559  Q
    |||||||| ||||||||||||||||| ||   ||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||    
T  8806430 taatgtgcctcactaatattaaaaatatttgtcatatttattatccaagaaattgggataatttt-ataacaaaacaaattatattttagttgaaaatg 8806333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 20892388 - 20892294
Alignment:
Q  452 tgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 546  Q
    ||||||||||||||||| ||||||||||||||||| ||||  ||||||||| |||||||| ||||||||||||||| |||||| |||||||||||    
T  20892388 tgttcctaataatgtgcctcactaatattaaaaatattgatgatatttattttccaagaatttgggataattttcaaaacaaaacaaattctatt 20892294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 444 - 558
Target Start/End: Complemental strand, 38915843 - 38915730
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||| |||||||||||||| || ||   ||||||||||||||||||||||||||||||||| ||||||||  ||  | |    
T  38915843 gggccctttgttcctaataatgtgcctcactaatattaaatatattagtcatatttattatccaagaaattgggataatttt-ataacaaaaaaatatat 38915745  T
Q  544 attttagttgaaaat 558  Q
    |||||||||||||||    
T  38915744 attttagttgaaaat 38915730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 450 - 558
Target Start/End: Original strand, 29149634 - 29149741
Alignment:
Q  450 tttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttta 549  Q
    ||||||||||||||||||| ||| ||||||||||||| ||    ||||||||||||||| |||||| ||||||||||||||| ||||||||| |||||||    
T  29149634 tttgttcctaataatgtgcctcattaatattaaaaatatttgtgatatttattatccaaaaaattgagataattttcataac-aagcaaattttatttta 29149732  T
Q  550 gttgaaaat 558  Q
    |||||||||    
T  29149733 gttgaaaat 29149741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 326 - 561
Target Start/End: Complemental strand, 16040438 - 16040198
Alignment:
Q  326 gatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaataatatgctcgaaaat---- 421  Q
    |||||| ||||||||||||||| |||||||||||||||||||| ||| ||||||            ||||||| |||||||||| ||||| |||||        
T  16040438 gatttgctatatatatcccatgtagcacaaatatttctatataaaccctcctataaaaaaaa----ttggttgttcttaataatgtgctcaaaaatttgt 16040343  T
Q  422 -----aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgg 516  Q
         |||||||| ||||||       ||||||||||||||||||||||||  |||||||| | |||||| |||   |||||| ||||| |||||||||     
T  16040342 tattgaagaaattagtgatatttttttgggccctttgttcctaataatgtgtctcactaatttaaaaaatattggtgatattttttatcaaagaaattga 16040243  T
Q  517 gataattttcataacaaagcaaattctattttagttgaaaatggg 561  Q
    |||||||||||||||||| |||||  ||||||| |||||||||||    
T  16040242 gataattttcataacaaaacaaatcttattttaattgaaaatggg 16040198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 444 - 561
Target Start/End: Original strand, 38491012 - 38491129
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||| ||| ||||||||||||||| |||||| |    
T  38491012 gggccctttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattaggagaattttcataacaaaacaaattat 38491111  T
Q  544 attttagttgaaaatggg 561  Q
    ||||||||||||||||||    
T  38491112 attttagttgaaaatggg 38491129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 444 - 560
Target Start/End: Original strand, 7850280 - 7850396
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |     ||||||||||||||  |||||| || ||||||||||||||| |||||| |    
T  7850280 gggccctttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgagagaattttcataacaaaacaaattat 7850379  T
Q  544 attttagttgaaaatgg 560  Q
    |||||||||||||||||    
T  7850380 attttagttgaaaatgg 7850396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 447 - 558
Target Start/End: Complemental strand, 5121316 - 5121205
Alignment:
Q  447 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 546  Q
    |||||||||||||||||||||  ||| ||||||||||||| |||   ||||||||||||||| ||||||  ||||||||||||| ||| |||||| ||||    
T  5121316 ccctttgttcctaataatgtggctcaataatattaaaaatattggtgatatttattatccaaaaaattgaaataattttcataataaaacaaattttatt 5121217  T
Q  547 ttagttgaaaat 558  Q
    ||| ||||||||    
T  5121216 ttaattgaaaat 5121205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 444 - 558
Target Start/End: Complemental strand, 6769489 - 6769378
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    |||||||||||| |||||||||||| ||| |||||||||| || |||| ||||||||||||||||||||||  || |||||| |||||||| |||||| |    
T  6769489 gggccctttgtttctaataatgtgcctcaataatattaaatatattgatcatatttattatccaagaaatt--gagaatttt-ataacaaaacaaattat 6769393  T
Q  544 attttagttgaaaat 558  Q
    ||||||||| |||||    
T  6769392 attttagttaaaaat 6769378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 111 - 252
Target Start/End: Original strand, 13490034 - 13490175
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggta-ggggcccnnnnnnnnnttaagctggagggtgtatatagaaat 209  Q
    |||||||||||||| | |||||||| ||||||||||||||||||||||||| ||||| |||||||         ||||| ||| ||||||||||| ||||    
T  13490034 cagggccggccctaagccataggccgcgagtgcgacggcctagggcccttgccggtagggggcccaatttttttttaagatgg-gggtgtatataaaaat 13490132  T
Q  210 atttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    ||||||||||||||||  || |||| |||||||| ||||||||    
T  13490133 atttggattttggggggaatatatagcaaaattcactgaaaag 13490175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 111 - 246
Target Start/End: Original strand, 2676608 - 2676745
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggta-ggggcccnnnnnnnnnttaagct-ggagggtgtatatagaaa 208  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| |||||||         ||||| |  | |||||||||||||||    
T  2676608 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggggcccaaaaaatctttaaggtaagggggtgtatatagaaa 2676707  T
Q  209 tatttggattttgggggatatgtataacaaaattctct 246  Q
    ||||||||||| ||||||||| ||||  ||||||||||    
T  2676708 tatttggatttcgggggatatatatagaaaaattctct 2676745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 449 - 534
Target Start/End: Complemental strand, 43171523 - 43171438
Alignment:
Q  449 ctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaa 534  Q
    |||| ||||||||||||||||||||||||||||||||| |||   ||||||||||||||| | |||| ||||||||||||||||||    
T  43171523 cttttttcctaataatgtgcttcactaatattaaaaatattggtgatatttattatccaatatattgagataattttcataacaaa 43171438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 111 - 252
Target Start/End: Complemental strand, 39537845 - 39537705
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggta-ggggcccnnnnnnnnnttaagctggagggtgtatatagaaat 209  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||| ||||| |||||||         |||||  || |||||||| || ||||    
T  39537845 cagggccggccctagggcataggccgcaagtgcgacggcctagggcctttgccggtagggggcccaaattttttttaaggagg-gggtgtatgtaaaaat 39537747  T
Q  210 atttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||||||||||||| ||| |||| |||||||||||||||||    
T  39537746 atttggattttggggg-tatatatagcaaaattctctgaaaag 39537705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 7849976 - 7850039
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtaggggccc 174  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||    
T  7849976 tcagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtaggggccc 7850039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 494 - 558
Target Start/End: Original strand, 37134753 - 37134817
Alignment:
Q  494 atatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaat 558  Q
    |||||||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  37134753 atatttattatctaagaaattggaataattttcataacaaaacaaattatattttagttgaaaat 37134817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 18888714 - 18888771
Alignment:
Q  114 ggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||||||||| |||||||||||||||||||||| || |||||||||    
T  18888714 ggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggg 18888771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 38490702 - 38490761
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  38490702 cagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtagggg 38490761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 474 - 560
Target Start/End: Original strand, 3654677 - 3654762
Alignment:
Q  474 taatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatgg 560  Q
    ||||||||||||| ||||  |||||||||||||||||||||  ||||||||| || |||||  ||||| ||||||||||||||||||    
T  3654677 taatattaaaaatattgatgatatttattatccaagaaattaagataatttt-attacaaaataaattatattttagttgaaaatgg 3654762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 14652182 - 14652120
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtaggggccc 174  Q
    ||||||||| |||||| |||||||||||||||||| |||||||||||| || ||||||||||||    
T  14652182 cagggccggtcctagg-cataggccacgagtgcgatggcctagggcccatgccggtaggggccc 14652120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 13383062 - 13383003
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||| || || ||||||    
T  13383062 cagggccggccctagg-cataggccgcgagtgcgacggcctagggcccatgccgttagggg 13383003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 6950353 - 6950399
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggccc 158  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  6950353 cagggccggtcctagg-cataggccacgagtgcgacggcctagggccc 6950399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 41869418 - 41869464
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggccc 158  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  41869418 cagggccggccctagg-cataggccgcgagtgcgacggcctagggccc 41869464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 692
Target Start/End: Complemental strand, 5578523 - 5578489
Alignment:
Q  658 cagatgttgtctaaaaaacatttatttggtagtga 692  Q
    |||||||||||||||||||||||||||||||||||    
T  5578523 cagatgttgtctaaaaaacatttatttggtagtga 5578489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 23962580 - 23962637
Alignment:
Q  194 gggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||||||||||||||||||||||| ||||| ||| ||||| ||||||||||| ||||    
T  23962580 gggtgtatatagaaatatttggatttcggggggtatatataa-aaaattctctgcaaag 23962637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 32698734 - 32698849
Alignment:
Q  445 ggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattcta 544  Q
    |||| ||||||| ||||||||||  ||||||||  ||||| | |||   |||||||||||| ||||||||| || ||| ||| ||||||| ||||   ||    
T  32698734 ggccatttgttcttaataatgtgtctcactaattataaaa-tattggtaatatttattatctaagaaattgtgagaatcttcgtaacaaaacaaacgata 32698832  T
Q  545 ttttagttgaaaatggg 561  Q
    |||||||||||||||||    
T  32698833 ttttagttgaaaatggg 32698849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 692
Target Start/End: Complemental strand, 9409475 - 9409441
Alignment:
Q  658 cagatgttgtctaaaaaacatttatttggtagtga 692  Q
    |||||||| ||||||||||||||||||||||||||    
T  9409475 cagatgttatctaaaaaacatttatttggtagtga 9409441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 326 - 372
Target Start/End: Complemental strand, 13826471 - 13826425
Alignment:
Q  326 gatttgttatatatatcccatgcagcacaaatatttctatatacacc 372  Q
    |||||| |||||||| |||||| ||||||| ||||||||||||||||    
T  13826471 gatttgctatatataccccatgtagcacaagtatttctatatacacc 13826425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 13382977 - 13382937
Alignment:
Q  194 gggtgtatatagaaatatttggattttgggggatatgtata 234  Q
    ||||| |||||||||||||||||||||| ||||||| ||||    
T  13382977 gggtgcatatagaaatatttggattttgagggatatatata 13382937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 43324167 - 43324108
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||| ||||||||  | ||||||||||||||||||| || | |||||||    
T  43324167 cagggccggccctagg-cataggccgggggtgcgacggcctagggcccatgcccgtagggg 43324108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 8e-63; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 444 - 594
Target Start/End: Complemental strand, 27861950 - 27861800
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27861950 gggccctttgttcctaataatgtacttcactaatattaaaaatatcgacaatatttattatccaagaaattggaataattttcataacaaagcaaattct 27861851  T
Q  544 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  27861850 attttagttgaaaatggggtgctaaaatttcagtctacttcgcatgtgcta 27861800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 317 - 594
Target Start/End: Original strand, 2553899 - 2554181
Alignment:
Q  317 ttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaataatatgctcg 416  Q
    |||||| |||||| | |||||||||||||||||||||||| ||||||||||||||| ||||||            ||||||| |||||||||||| || |    
T  2553899 ttttagtgagattcgctatatatatcccatgcagcacaaaaatttctatatacaccctcctataaaaaaaa----ttggttgttcttaataatatacttg 2553994  T
Q  417 aaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatcca 507  Q
    |||||         |||||||| ||||||       ||||||||||||| ||||||||||||||||||||||||||||| | ||| ||||||||||||||    
T  2553995 aaaatttattatcgaagaaattagtgatatttttttgggccctttgttcttaataatgtgcttcactaatattaaaaatatcgacgatatttattatcca 2554094  T
Q  508 agaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||  |||||||||||||||||| |||||||||    
T  2554095 agaaattgagataattttcattacaaagcaaattctattttatttgaaaatggggtgctaaaatttcagtctacttcacatgtgcta 2554181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 307 - 594
Target Start/End: Complemental strand, 33015464 - 33015172
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaat 406  Q
    ||||||||  |||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||            ||| ||| |||| ||    
T  33015464 tttttggcccttttagtgagatttgttatatatatcccatgtaacacaaatatttctatatacaccctcctataaaaaaat----ttgcttgttcttgat 33015369  T
Q  407 aatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatat 497  Q
    ||||||||| |||||         |||||||||||||||       |||||||||||| ||||||| |||||||| ||||||||||||| | ||| ||||    
T  33015368 aatatgctcaaaaatttattatcgaagaaattggtgatatttttttgggccctttgtttctaataaagtgcttcattaatattaaaaatatcgacgatat 33015269  T
Q  498 ttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  33015268 ttattatccaataaatggggataattttcataacaaagcaaattctattttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 33015172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 317 - 594
Target Start/End: Complemental strand, 41826225 - 41825943
Alignment:
Q  317 ttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaataatatgctcg 416  Q
    |||||| |||||| | |||||||||||||||||||||||| ||||||||||||||| ||||||            ||||||| ||||||||||||||| |    
T  41826225 ttttagtgagattcgctatatatatcccatgcagcacaaaaatttctatatacaccctcctataaaaaaaa----ttggttgttcttaataatatgcttg 41826130  T
Q  417 aaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatcca 507  Q
    |||||         |||||||| ||||||       ||||||||||||| ||||||||||||||||||||||||||||| | ||| ||||||||||||||    
T  41826129 aaaatttattatcgaagaaattagtgatatttttttgggccctttgttcttaataatgtgcttcactaatattaaaaatatcgacgatatttattatcca 41826030  T
Q  508 agaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    |||||||| |||||||||||| ||||| |||||||||||||| ||||||||||||||  |||||||| ||||||||| |||||||||    
T  41826029 agaaattgagataattttcattacaaaacaaattctattttatttgaaaatggggtgctaaaatttcggtctacttcacatgtgcta 41825943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 307 - 594
Target Start/End: Complemental strand, 44314312 - 44314022
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaat 406  Q
    |||||||| ||||||| |||||||| ||||||||||||||| | |||||| ||||||||||||||| |||| |            ||||||| |||| ||    
T  44314312 tttttggcctttttagtgagatttgctatatatatcccatgtaacacaaaaatttctatatacaccctcctgt----aaaaaaatttggttgttcttgat 44314217  T
Q  407 aatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatat 497  Q
    ||||||||| |||||         ||||||||||||||        |||||||||||||||||| |||||||||| ||||||||||||| | ||| ||||    
T  44314216 aatatgctcaaaaatttattatcgaagaaattggtgat--ttttttgggccctttgttcctaattatgtgcttcattaatattaaaaatatcgacgatat 44314119  T
Q  498 ttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| ||| |||||    
T  44314118 ttattatccaagaaattgagataattttcataacaaagcaaattctattttagttgaaaatagggtgctaaaatttcagtctacttcacatttgcta 44314022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 307 - 594
Target Start/End: Complemental strand, 44322491 - 44322201
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaat 406  Q
    |||||||| ||||||| |||||||| ||||||||||||||| | |||||| ||||||||||||||| |||| |            ||||||| |||| ||    
T  44322491 tttttggcctttttagtgagatttgctatatatatcccatgtaacacaaaaatttctatatacaccctcctgt----aaaaaaatttggttgttcttgat 44322396  T
Q  407 aatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatat 497  Q
    ||||||||| |||||         ||||||||||||||        |||||||||||||||||| |||||||||| ||||||||||||| | ||| ||||    
T  44322395 aatatgctcaaaaatttattatcgaagaaattggtgat--ttttttgggccctttgttcctaattatgtgcttcattaatattaaaaatatcgacgatat 44322298  T
Q  498 ttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| ||| |||||    
T  44322297 ttattatccaagaaattgagataattttcataacaaagcaaattctattttagttgaaaatagggtgctaaaatttcagtctacttcacatatgcta 44322201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 444 - 594
Target Start/End: Complemental strand, 22576113 - 22575963
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| | ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22576113 gggccctttgttcctaataatttgcctcactaatattaaaaatatcgacgatatttattatccaaaaaattgggataattttcataacaaagcaaattct 22576014  T
Q  544 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    |||||||||||||||||||||  ||||||| ||| ||||| | ||||||||    
T  22576013 attttagttgaaaatggggtgctaaaattttagtttactttgaatgtgcta 22575963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 317 - 594
Target Start/End: Original strand, 6221228 - 6221511
Alignment:
Q  317 ttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaataatatgctcg 416  Q
    |||||| |||||||  ||||||||||||||| | |||||||||||||||||||||| ||||||            ||||||| |||| |||||||||||     
T  6221228 ttttagtgagattttctatatatatcccatgtaacacaaatatttctatatacaccctcctataaaaaaaat---ttggttgttcttgataatatgctca 6221324  T
Q  417 aaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatcca 507  Q
    |||||         |||||||||||||||        |||| ||||||||||||||||||||||| ||||||||||||| |  || ||||||||||||||    
T  6221325 aaaatttattatcgaagaaattggtgatatttttttaggccttttgttcctaataatgtgcttcattaatattaaaaatatctacgatatttattatcca 6221424  T
Q  508 agaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||  |||||||||||||||||||| |||||||||||||||| ||||| |||||  |||||||||||||||||| |||||||||    
T  6221425 agaaatgaggataattttcataacaaagtaaattctattttagttaaaaatagggtgctaaaatttcagtctacttcacatgtgcta 6221511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 422 - 594
Target Start/End: Original strand, 19685746 - 19685916
Alignment:
Q  422 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 521  Q
    |||||||||||||||       |||||||||| ||||||||||||||||||||||||||||| || | ||| ||||||||||||||||||||||||||||    
T  19685746 aagaaattggtgatatttttttgggccctttgctcctaataatgtgcttcactaatattaaacatatcgacgatatttattatccaagaaattgggataa 19685845  T
Q  522 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||| ||||  ||||||||||||||||||||||||| | |||  |||||||||||||||||| |||||||||    
T  19685846 ttttcgtaac--agcaaattctattttagttgaaaatagagtgctaaaatttcagtctacttcacatgtgcta 19685916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 444 - 556
Target Start/End: Complemental strand, 38566328 - 38566216
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||| |||||| |    
T  38566328 gggccatttgttcctaataatgtgcgtcactaatattaaaaatattggtgatatttattatccaagaaattgggataattttcataacaaaacaaattat 38566229  T
Q  544 attttagttgaaa 556  Q
    |||||||||||||    
T  38566228 attttagttgaaa 38566216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 444 - 558
Target Start/End: Original strand, 33054748 - 33054862
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||   ||||||||||||||| |||||  |||||||||||||||||| |||||| |    
T  33054748 gggccctttgttcctaataatgtgcttcactaatattaaaaatattggtgatatttattatccaataaattatgataattttcataacaaaacaaattat 33054847  T
Q  544 attttagttgaaaat 558  Q
    |||||||||||||||    
T  33054848 attttagttgaaaat 33054862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 444 - 561
Target Start/End: Complemental strand, 19091312 - 19091195
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||| ||| ||||||||||||| |||   |||||||||||| |||||||| | ||||||||||||||||| |||||| |    
T  19091312 gggccctttgttcctaataatgtgcctcaataatattaaaaatattggtgatatttattatctaagaaatttgtataattttcataacaaaacaaattat 19091213  T
Q  544 attttagttgaaaatggg 561  Q
    ||||||||||||||||||    
T  19091212 attttagttgaaaatggg 19091195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 444 - 557
Target Start/End: Complemental strand, 41302576 - 41302463
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||| ||||||||||| |||||||||||| |||| |||   ||||||||||||||| ||||||||||||||||||||||||| |||||| |    
T  41302576 gggccctttgttcgtaataatgtgcctcactaatattacaaatattgttgatatttattatccaaaaaattgggataattttcataacaaaacaaattat 41302477  T
Q  544 attttagttgaaaa 557  Q
    ||||||||| ||||    
T  41302476 attttagttcaaaa 41302463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 422 - 559
Target Start/End: Complemental strand, 38423087 - 38422950
Alignment:
Q  422 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 521  Q
    |||||||||||||||       ||||||||||||||||||||||||| ||||||||  ||||||| ||||  |||||||||||||||||||||| || ||    
T  38423087 aagaaattggtgatatatttttgggccctttgttcctaataatgtgcctcactaattataaaaatattgatgatatttattatccaagaaattgagagaa 38422988  T
Q  522 ttttcataacaaagcaaattctattttagttgaaaatg 559  Q
    | ||||||||||| |||||  |||||||||||||||||    
T  38422987 tcttcataacaaaacaaatgatattttagttgaaaatg 38422950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 451 - 556
Target Start/End: Original strand, 10022892 - 10022997
Alignment:
Q  451 ttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttag 550  Q
    |||||||||||||||||| |||||||||| |||||| |||   |||||||||||||||||||||| |||||||||||||||||| |||| | ||||||||    
T  10022892 ttgttcctaataatgtgcctcactaatataaaaaatattggggatatttattatccaagaaattgagataattttcataacaaaacaaaatatattttag 10022991  T
Q  551 ttgaaa 556  Q
    ||||||    
T  10022992 ttgaaa 10022997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 444 - 561
Target Start/End: Complemental strand, 11199414 - 11199297
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||| | ||  ||||||||||| |||||||||| ||| ||||||| | |||| ||||||||    
T  11199414 gggccttttgttcctaataatgtgcctcattaatattaaaaatatcgatgatatttattatgcaagaaattgagatgattttcaaagcaaaacaaattct 11199315  T
Q  544 attttagttgaaaatggg 561  Q
    ||||||||||||||||||    
T  11199314 attttagttgaaaatggg 11199297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 110 - 252
Target Start/End: Original strand, 2553701 - 2553843
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtaggggccc-nnnnnnnnnttaagctggagggtgtatatagaaa 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||          ||||| | | |||| ||||||||||    
T  2553701 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgccggtaggggcccaattttttttttaaggtag-gggtatatatagaaa 2553799  T
Q  209 tatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||||||||| |||| ||| ||||  ||||||||||||||||    
T  2553800 tatttggattttagggggtatatatagtaaaattctctgaaaag 2553843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 444 - 559
Target Start/End: Original strand, 24484451 - 24484566
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||| ||||||||||||||||||| | ||||||||||||||| ||    ||||||||||||||||||||||  ||||||| ||||||||| |||||| |    
T  24484451 gggccttttgttcctaataatgtgcctaactaatattaaaaatatttgtgatatttattatccaagaaattgaaataatttacataacaaaacaaattat 24484550  T
Q  544 attttagttgaaaatg 559  Q
    ||||||||||||||||    
T  24484551 attttagttgaaaatg 24484566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 444 - 558
Target Start/End: Original strand, 14903999 - 14904113
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    |||||| || ||||||||||||||||||||||||||||||||| ||    |||||||||||||||  |||| ||||||||||||| ||||| |||||| |    
T  14903999 gggcccattattcctaataatgtgcttcactaatattaaaaatattcgtgatatttattatccaatgaattaggataattttcatgacaaaacaaattat 14904098  T
Q  544 attttagttgaaaat 558  Q
    |||||||||||||||    
T  14904099 attttagttgaaaat 14904113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 444 - 526
Target Start/End: Complemental strand, 41423004 - 41422922
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttc 526  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||   ||||||||||||||||||| |||||||||||||    
T  41423004 gggccctttgttcctaataatgtgcttcactaatattaaaaatattggtgatatttattatccaagaaactgggataattttc 41422922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 444 - 561
Target Start/End: Complemental strand, 7880488 - 7880371
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||||||| ||||||||||||||| |||||| |    
T  7880488 gggccctttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattttcataacaaaacaaattat 7880389  T
Q  544 attttagttgaaaatggg 561  Q
    ||||||||||||||||||    
T  7880388 attttagttgaaaatggg 7880371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 458 - 559
Target Start/End: Complemental strand, 13597989 - 13597889
Alignment:
Q  458 taataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaa 557  Q
    ||||||||||| || |||||||||||||| |||  |||||||||||||||||||| |||||||||||| |||||||| |||||| |||||||||||||||    
T  13597989 taataatgtgcctcgctaatattaaaaatattggtcatatttattatccaagaaaatgggataatttt-ataacaaaacaaattatattttagttgaaaa 13597891  T
Q  558 tg 559  Q
    ||    
T  13597890 tg 13597889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 110 - 252
Target Start/End: Complemental strand, 41826423 - 41826281
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtaggggccc-nnnnnnnnnttaagctggagggtgtatatagaaa 208  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||          ||||| | | |||| ||||||||||    
T  41826423 tcagggccggccctagggcataggccacgagtacgacggcctagggcccttgccggtaggggcccaattttttttttaaggtag-gggtatatatagaaa 41826325  T
Q  209 tatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||||||||| |||| ||| ||||  ||||||||||||||||    
T  41826324 tatttggattttagggggtatatatagtaaaattctctgaaaag 41826281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 450 - 561
Target Start/End: Original strand, 30386835 - 30386945
Alignment:
Q  450 tttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttta 549  Q
    ||||||||||||||||||  ||||||||||||||||| | |   ||||||||||||||||||||| |||||||||| |||||||| |||||| |||||||    
T  30386835 tttgttcctaataatgtgtctcactaatattaaaaatatcggtgatatttattatccaagaaattaggataatttt-ataacaaaacaaattatatttta 30386933  T
Q  550 gttgaaaatggg 561  Q
    ||| ||||||||    
T  30386934 gttaaaaatggg 30386945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 444 - 558
Target Start/End: Complemental strand, 45277620 - 45277506
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||||||| ||||||||||||||| |||||| |    
T  45277620 gggccctttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattttcataacaaaacaaattat 45277521  T
Q  544 attttagttgaaaat 558  Q
    |||||||||||||||    
T  45277520 attttagttgaaaat 45277506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 444 - 561
Target Start/End: Original strand, 19677994 - 19678111
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    |||||||||||| |||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||||||| |||| |||||||||| |||||| |    
T  19677994 gggccctttgtttctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattctcataacaaaacaaattat 19678093  T
Q  544 attttagttgaaaatggg 561  Q
    ||||||||||||||||||    
T  19678094 attttagttgaaaatggg 19678111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 19685439 - 19685564
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagg-ggcccnnnnnnnnnttaagct-ggagggtgtatatagaaa 208  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||| |||||         ||||| |  | |||||||||||||||    
T  19685439 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtaggaggcccaaattttttttaaggtaagggggtgtatatagaaa 19685538  T
Q  209 tatttggattttgggggatatgtata 234  Q
    ||||||||||||||||| ||| ||||    
T  19685539 tatttggattttggggggtatatata 19685564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 111 - 245
Target Start/End: Complemental strand, 33015654 - 33015518
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggta-ggggcccnnnnnnnnnttaagct-ggagggtgtatatagaaa 208  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| || ||||| |||||||         ||||| |  | |||||||||||||||    
T  33015654 cagggccggccctagggcataggccgcgagtgtgacggcctagggcccatgccggtagggggcccaaaatttttttaaggtaagggggtgtatatagaaa 33015555  T
Q  209 tatttggattttgggggatatgtataacaaaattctc 245  Q
    ||||||||||| ||||||||| ||||  |||||||||    
T  33015554 tatttggatttcgggggatatatatagaaaaattctc 33015518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 444 - 557
Target Start/End: Original strand, 6882973 - 6883088
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataac--aaagcaaatt 541  Q
    ||||| ||||||| ||||||||||  |||| |||||||||||| |||   ||| |||||||||||||||||| |||||||||||||||  |||  |||||    
T  6882973 gggccatttgttcttaataatgtgtctcacaaatattaaaaatattggtgatacttattatccaagaaattgagataattttcataacaaaaaaaaaatt 6883072  T
Q  542 ctattttagttgaaaa 557  Q
     |||||||||||||||    
T  6883073 atattttagttgaaaa 6883088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 44314502 - 44314442
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||    
T  44314502 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggg 44314442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 44322681 - 44322621
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||    
T  44322681 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggg 44322621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 449 - 555
Target Start/End: Original strand, 9057380 - 9057484
Alignment:
Q  449 ctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttt 548  Q
    ||||||| |||||||||||| ||||||| |||||| || |||  ||||||||||||||||||||||| ||||||||| || ||||| |||||| ||||||    
T  9057380 ctttgtttctaataatgtgcctcactaaaattaaatatattggtcatatttattatccaagaaattgagataatttt-at-acaaaacaaattatatttt 9057477  T
Q  549 agttgaa 555  Q
    | |||||    
T  9057478 aattgaa 9057484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 444 - 561
Target Start/End: Original strand, 2565587 - 2565704
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    |||||||||||||||||||||||   | ||||||||||||||| |     ||||||||||||||  ||||||||| ||| ||||||||||| |||||  |    
T  2565587 gggccctttgttcctaataatgtatcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaatcttcataacaaaacaaataat 2565686  T
Q  544 attttagttgaaaatggg 561  Q
    |||||||| |||||||||    
T  2565687 attttagtagaaaatggg 2565704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 22576443 - 22576382
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||| || |||||||||    
T  22576443 tcagggccagccctagggcataggccatgagtgcgacggcctagggcccatgccggtagggg 22576382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 45277928 - 45277868
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  45277928 tcagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtagggg 45277868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 90775 - 90716
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  90775 cagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtagggg 90716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 18781623 - 18781564
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  18781623 cagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtagggg 18781564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 446 - 561
Target Start/End: Original strand, 29303144 - 29303259
Alignment:
Q  446 gccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctat 545  Q
    ||||||| ||||||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||||||| |||| | | |||||| |||||| |||    
T  29303144 gccctttattcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattctaagaacaaaacaaattatat 29303243  T
Q  546 tttagttgaaaatggg 561  Q
    ||||||||||||||||    
T  29303244 tttagttgaaaatggg 29303259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 501 - 559
Target Start/End: Complemental strand, 41422921 - 41422863
Alignment:
Q  501 ttatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatg 559  Q
    |||||||||||||||| |||||||||||||||||  ||||| |||||||||||||||||    
T  41422921 ttatccaagaaattggaataattttcataacaaaataaattatattttagttgaaaatg 41422863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 7880775 - 7880715
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| || || ||||||    
T  7880775 tcagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccgttagggg 7880715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 451 - 560
Target Start/End: Original strand, 25621421 - 25621529
Alignment:
Q  451 ttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttag 550  Q
    ||||||||| | |||||||||||||||||||| ||| ||    ||| ||||||||||| |||||| || | |||||||| |||| |||||| ||||||||    
T  25621421 ttgttcctacttatgtgcttcactaatattaacaatattagtgatacttattatccaataaattgagaca-ttttcatagcaaaacaaattatattttag 25621519  T
Q  551 ttgaaaatgg 560  Q
    ||||||||||    
T  25621520 ttgaaaatgg 25621529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 2565275 - 2565334
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||| || |||||||||    
T  2565275 cagggccggccctagg-cataggccgcgagtgcgacggcctagggcccatgccggtagggg 2565334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 11199658 - 11199603
Alignment:
Q  194 gggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctgaaa 250  Q
    |||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  11199658 gggtgtatatagaaatatttggattttggggg-tatatatagcaaaattctctgaaa 11199603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 40709951 - 40709899
Alignment:
Q  122 ctagggcataggccacgagtgcgacggcctagggcccttgtcggtaggggccc 174  Q
    |||||||||||||| |||||||||||||||||||||| || ||||||||||||    
T  40709951 ctagggcataggccgcgagtgcgacggcctagggcccatgccggtaggggccc 40709899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 447 - 561
Target Start/End: Complemental strand, 18781308 - 18781194
Alignment:
Q  447 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 546  Q
    ||||||||| ||||||||||   | ||||||||||||||| |     ||||||||||||||  ||||||||| ||| ||||||||||| |||||  ||||    
T  18781308 ccctttgttactaataatgtatcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaatcttcataacaaaacaaataatatt 18781209  T
Q  547 ttagttgaaaatggg 561  Q
    ||||| |||||||||    
T  18781208 ttagtagaaaatggg 18781194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 496 - 557
Target Start/End: Complemental strand, 9425278 - 9425217
Alignment:
Q  496 atttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaa 557  Q
    |||||||||||||||||||| || ||| ||||||||||| |||||  |||||||||||||||    
T  9425278 atttattatccaagaaattgagagaatcttcataacaaaacaaatgatattttagttgaaaa 9425217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 19674456 - 19674516
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||| || |||||||||    
T  19674456 tcagggccggccctagg-cataggtcacaagtgcgacggcctagggcccatgccggtagggg 19674516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 18583004 - 18582958
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggccc 158  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  18583004 cagggccggccctagg-cataggccgcgagtgcgacggcctagggccc 18582958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 517 - 560
Target Start/End: Complemental strand, 25416117 - 25416074
Alignment:
Q  517 gataattttcataacaaagcaaattctattttagttgaaaatgg 560  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||    
T  25416117 gataattttgataacaaagcaaattatattttagttgaaaatgg 25416074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 31549236 - 31549172
Alignment:
Q  422 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaat 486  Q
    |||||||||||||||       ||||| ||||||||||||||||||| |||||||||||||||||    
T  31549236 aagaaattggtgatatttttttgggccatttgttcctaataatgtgcctcactaatattaaaaat 31549172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 450 - 557
Target Start/End: Complemental strand, 43673397 - 43673290
Alignment:
Q  450 tttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttta 549  Q
    ||||||| ||||||||||| ||| ||||  ||||||| ||||  ||||||||||||| ||||||   || ||| ||| ||||||| |||||| ||||| |    
T  43673397 tttgttcataataatgtgcctcaataattataaaaatattgatgatatttattatccgagaaatatagagaatcttcctaacaaaacaaattatatttga 43673298  T
Q  550 gttgaaaa 557  Q
    ||||||||    
T  43673297 gttgaaaa 43673290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 692
Target Start/End: Original strand, 2554245 - 2554279
Alignment:
Q  658 cagatgttgtctaaaaaacatttatttggtagtga 692  Q
    |||||||||||||||||||||||||||||||||||    
T  2554245 cagatgttgtctaaaaaacatttatttggtagtga 2554279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 252
Target Start/End: Original strand, 6221032 - 6221171
Alignment:
Q  115 gccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg-cccnnnnnnnnnttaagct--ggagggtgtatatagaaatat 211  Q
    ||||||||||| ||||||||| |||||||||||||||| ||||  || ||||||||| |||         ||||| |  ||||| ||||||||||| |||    
T  6221032 gccggccctagagcataggccgcgagtgcgacggcctaaggcctatgccggtagggggcccaaaaaatctttaaggtaaggagg-tgtatatagaagtat 6221130  T
Q  212 ttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||||| ||||||||| ||||  ||||||||||| ||||    
T  6221131 ttggatttcgggggatatatatagaaaaattctctgtaaag 6221171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 692
Target Start/End: Original strand, 7444111 - 7444145
Alignment:
Q  658 cagatgttgtctaaaaaacatttatttggtagtga 692  Q
    |||||||||||||||||||||||||||||||||||    
T  7444111 cagatgttgtctaaaaaacatttatttggtagtga 7444145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 333 - 379
Target Start/End: Complemental strand, 27862048 - 27862003
Alignment:
Q  333 tatatatatcccatgcagcacaaatatttctatatacaccttcctat 379  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  27862048 tatatatatcccatgcagcacaaa-atttctatatacaccctcctat 27862003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 692
Target Start/End: Complemental strand, 41825879 - 41825845
Alignment:
Q  658 cagatgttgtctaaaaaacatttatttggtagtga 692  Q
    |||||||||||||||||||||||||||||||||||    
T  41825879 cagatgttgtctaaaaaacatttatttggtagtga 41825845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 27862179 - 27862122
Alignment:
Q  195 ggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||||||| |||||||||||||||||||| ||| ||||  ||||||| ||||||||    
T  27862179 ggtgtatataaaaatatttggattttggggggtatatatagtaaaattcactgaaaag 27862122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 7443879 - 7443947
Alignment:
Q  184 ttaagctggagggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    ||||| ||| ||||||||||| ||||||||||||||||| || ||| |||| |||||||| | ||||||    
T  7443879 ttaagatggggggtgtatataaaaatatttggattttggtgggtatatatagcaaaattcaccgaaaag 7443947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 14903684 - 14903740
Alignment:
Q  115 gccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||| ||||||||  | ||||||||||||| |||||||| |||||||||    
T  14903684 gccggccctaggccataggccgggggtgcgacggcctatggcccttgccggtagggg 14903740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 379
Target Start/End: Complemental strand, 22576243 - 22576183
Alignment:
Q  319 ttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctat 379  Q
    |||| |||||||  |||||||||||||||  | ||||||||||||||||||||| ||||||    
T  22576243 ttagtgagatttactatatatatcccatgtggtacaaatatttctatatacaccctcctat 22576183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 22576358 - 22576302
Alignment:
Q  194 gggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctgaaa 250  Q
    ||||||||||||||||||||||||||  |||| ||  |||| |||||||||||||||    
T  22576358 gggtgtatatagaaatatttggatttgtgggggtacatatagcaaaattctctgaaa 22576302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 447 - 486
Target Start/End: Complemental strand, 25416163 - 25416124
Alignment:
Q  447 ccctttgttcctaataatgtgcttcactaatattaaaaat 486  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  25416163 ccctttgttcctaataatgtgtctcactaatattaaaaat 25416124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 38696798 - 38696844
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggccc 158  Q
    |||||||||||||||| |||||||  ||||||||||||||||||||||    
T  38696798 cagggccggccctagg-cataggctgcgagtgcgacggcctagggccc 38696844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 692
Target Start/End: Complemental strand, 27861741 - 27861707
Alignment:
Q  658 cagatgttgtctaaaaaacatttatttggtagtga 692  Q
    |||||||||||||||||| ||||||||||||||||    
T  27861741 cagatgttgtctaaaaaatatttatttggtagtga 27861707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 10022563 - 10022607
Alignment:
Q  113 gggccggccctagggcataggccacgagtgcgacggcctagggccc 158  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||||    
T  10022563 gggctggccctagg-cataggccaggagtgcgacggcctagggccc 10022607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 33054398 - 33054457
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtaggg 170  Q
    ||||||||||||||||| |||||| |  | |||||||||||||||||||||| || |||||    
T  33054398 tcagggccggccctaggccataggtcggg-gtgcgacggcctagggcccttgccgataggg 33054457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 1e-58; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 422 - 594
Target Start/End: Complemental strand, 10095173 - 10095001
Alignment:
Q  422 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 521  Q
    |||||||||||||||       |||| |||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  10095173 aagaaattggtgatatttttttgggctctttgttcctaataatgtgcttcattaatattaaaaatattgacgatatttattatccaagaaattgggataa 10095074  T
Q  522 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    |||||||||||||||||||||||||||| |||||||| |||||  |||||||||||||||||| |||||||||    
T  10095073 ttttcataacaaagcaaattctattttaattgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 10095001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 444 - 594
Target Start/End: Complemental strand, 7413872 - 7413723
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| ||| |||| |||||||    
T  7413872 gggccctttgttcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataattttcgtaa-aaagaaaattct 7413774  T
Q  544 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  7413773 attttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 7413723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 444 - 594
Target Start/End: Complemental strand, 7459953 - 7459804
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| ||| |||| |||||||    
T  7459953 gggccctttgttcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataattttcgtaa-aaagaaaattct 7459855  T
Q  544 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  7459854 attttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 7459804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 448 - 594
Target Start/End: Complemental strand, 39480376 - 39480230
Alignment:
Q  448 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 547  Q
    ||||||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39480376 cctttgttcctaataatgtgcttcactaatattaaaaatatcgacgatattttttatccaagaaattgggataattttcataacaaagcaaattctattt 39480277  T
Q  548 tagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    |||||||||||||||||  ||||||| ||| |||   ||||||||||    
T  39480276 tagttgaaaatggggtgctaaaattttagtttaccatgcatgtgcta 39480230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 448 - 562
Target Start/End: Complemental strand, 6261706 - 6261592
Alignment:
Q  448 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 547  Q
    ||||||||||||||||||||||||||||||||||||||| ||||  |||||| |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  6261706 cctttgttcctaataatgtgcttcactaatattaaaaatattgatgatattttttattcaataaattgggataattttcataacaaagcaaattctattt 6261607  T
Q  548 tagttgaaaatgggg 562  Q
    ||||| |||||||||    
T  6261606 tagttaaaaatgggg 6261592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 444 - 561
Target Start/End: Original strand, 52458991 - 52459108
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||  ||||||||||||||||| | ||  ||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  52458991 gggccctttgttcctaataatgtgtctcactaatattaaaaatatcgatgatatttattatccaagaaattgggatatttttcataacaaaacaaattct 52459090  T
Q  544 attttagttgaaaatggg 561  Q
    ||||||||||||||||||    
T  52459091 attttagttgaaaatggg 52459108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 444 - 561
Target Start/End: Original strand, 52460248 - 52460365
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||  ||||||||||||||||| | ||  ||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  52460248 gggccctttgttcctaataatgtgtctcactaatattaaaaatatcgatgatatttattatccaagaaattgggatatttttcataacaaaacaaattct 52460347  T
Q  544 attttagttgaaaatggg 561  Q
    ||||||||||||||||||    
T  52460348 attttagttgaaaatggg 52460365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 447 - 561
Target Start/End: Original strand, 10142121 - 10142235
Alignment:
Q  447 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 546  Q
    ||||||||| |||||||||||||||||||||||||||||| |||   ||||||||||||||| ||||||||||||||||||||||||| |||||| ||||    
T  10142121 ccctttgtttctaataatgtgcttcactaatattaaaaatattggtgatatttattatccaataaattgggataattttcataacaaaacaaattatatt 10142220  T
Q  547 ttagttgaaaatggg 561  Q
    ||| |||||||||||    
T  10142221 ttacttgaaaatggg 10142235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 444 - 559
Target Start/End: Complemental strand, 1843287 - 1843172
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||   ||||| |||||| |||||||||||||||||||||||||||| |||||| |    
T  1843287 gggccctttgttcctaataatgtgcctcactaatattaaaaatattggagatattcattatctaagaaattgggataattttcataacaaaacaaattat 1843188  T
Q  544 attttagttgaaaatg 559  Q
    ||||| ||||||||||    
T  1843187 atttttgttgaaaatg 1843172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 444 - 558
Target Start/End: Original strand, 13957225 - 13957339
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||    ||||||||||||||| ||||||||||||||||| ||||||| |||||| |    
T  13957225 gggccctttgttcctaataatgtgcttcactaatatgaaaaatattagtgatatttattatccaataaattgggataattttcgtaacaaaacaaattat 13957324  T
Q  544 attttagttgaaaat 558  Q
    |||||||||||||||    
T  13957325 attttagttgaaaat 13957339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 447 - 559
Target Start/End: Complemental strand, 9921977 - 9921865
Alignment:
Q  447 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 546  Q
    ||||||| |||||||||||||  ||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| ||| ||| |||||| ||||    
T  9921977 ccctttggtcctaataatgtgtctcactaatattaaaaatattgatgatatttattatccaagaaattgggataattttcgtaataaaacaaattatatt 9921878  T
Q  547 ttagttgaaaatg 559  Q
    |||||||||||||    
T  9921877 ttagttgaaaatg 9921865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 448 - 594
Target Start/End: Original strand, 36213712 - 36213857
Alignment:
Q  448 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttatt-atccaagaaattgggataattttcataacaaagcaaattctatt 546  Q
    ||||| ||||||||||||||||||||||||||||||| | ||||| |||||| || ||| ||||||||||||||||||  |||||||| |||||||||||    
T  36213712 cctttattcctaataatgtgcttcactaatattaaaa-tattgacgatatttttttatctaagaaattgggataattta-ataacaaaacaaattctatt 36213809  T
Q  547 ttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||||||||||||||  ||||||| ||| ||||  ||||||||||    
T  36213810 ttagttgaaaatggggtgctaaaattttagtttactatgcatgtgcta 36213857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 460 - 559
Target Start/End: Complemental strand, 42512344 - 42512245
Alignment:
Q  460 ataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatg 559  Q
    ||||| ||||||||||||||||||||| |||   ||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  42512344 ataatttgcttcactaatattaaaaatattggggatatttattatccaataaattgggataattttcataacaaaacaaattatattttagttgaaaatg 42512245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 446 - 559
Target Start/End: Complemental strand, 3665589 - 3665477
Alignment:
Q  446 gccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctat 545  Q
    |||||||||||| |||||| ||  ||||||||||||||| | | ||  ||||||||||| |||||||||| |||||||||||||||||| ||||||||||    
T  3665589 gccctttgttccaaataatatgtctcactaatattaaaa-tatcgatgatatttattattcaagaaattgagataattttcataacaaaacaaattctat 3665491  T
Q  546 tttagttgaaaatg 559  Q
    ||||||||||||||    
T  3665490 tttagttgaaaatg 3665477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 111 - 252
Target Start/End: Complemental strand, 39480714 - 39480571
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg--cccnnnnnnnnnttaagctggagggtgtatatagaaa 208  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||  ||          ||||  || |||| |||||||||||    
T  39480714 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggggcccaaaagtttttttaaagtgtagggggtatatagaaa 39480615  T
Q  209 tatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    ||||||||||||||||| ||| |||| |||||||||||||||||    
T  39480614 tatttggattttggggggtatatatagcaaaattctctgaaaag 39480571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 444 - 561
Target Start/End: Original strand, 51337617 - 51337734
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    |||||||||| |||||||||| ||  | ||||||||||||||| |     ||||||||||||||| ||||||||| ||||||||||||||| |||||| |    
T  51337617 gggccctttggtcctaataatatgtcttactaatattaaaaatatatgtgatatttattatccaaaaaattgggagaattttcataacaaaacaaattat 51337716  T
Q  544 attttagttgaaaatggg 561  Q
    ||||||||||||||||||    
T  51337717 attttagttgaaaatggg 51337734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 494 - 558
Target Start/End: Complemental strand, 24611430 - 24611366
Alignment:
Q  494 atatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaat 558  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  24611430 atatttattatccaagaaattgagataattttcataacaaaacaaattctattttagttgaaaat 24611366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 444 - 560
Target Start/End: Complemental strand, 28143584 - 28143468
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||||||| |||| |||||||||| |||||| |    
T  28143584 gggccctttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattctcataacaaaacaaattat 28143485  T
Q  544 attttagttgaaaatgg 560  Q
    |||||||||||||||||    
T  28143484 attttagttgaaaatgg 28143468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 444 - 555
Target Start/End: Complemental strand, 29283139 - 29283029
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    |||||||||||| |||||||||||| |||||||||||||| || |||   |||||||||||||||||||||| ||||||||| ||||||||  ||||| |    
T  29283139 gggccctttgtttctaataatgtgcctcactaatattaaatatattggtaatatttattatccaagaaattgagataatttt-ataacaaaataaattat 29283041  T
Q  544 attttagttgaa 555  Q
    |||||| |||||    
T  29283040 attttaattgaa 29283029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 449 - 560
Target Start/End: Complemental strand, 10373495 - 10373385
Alignment:
Q  449 ctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttt 548  Q
    |||| |||| |||||||| | ||||||||||||||||| |||  |||||| ||||| |||||||||| ||||||||| |||| ||| |||||| ||||||    
T  10373495 ctttcttccgaataatgtccctcactaatattaaaaatattggtcatattcattatacaagaaattgagataatttt-ataataaaacaaattatatttt 10373397  T
Q  549 agttgaaaatgg 560  Q
    ||||||||||||    
T  10373396 agttgaaaatgg 10373385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 456 - 558
Target Start/End: Complemental strand, 41509310 - 41509209
Alignment:
Q  456 cctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaa 555  Q
    ||||||||||||  ||||||||||||||||| |||   |||||||||||||||||||||| || |||||| ||||| || |||||| |||||||||||||    
T  41509310 cctaataatgtgtctcactaatattaaaaatattggtaatatttattatccaagaaattgagacaatttt-ataactaaacaaattatattttagttgaa 41509212  T
Q  556 aat 558  Q
    |||    
T  41509211 aat 41509209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 10095485 - 10095425
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||    
T  10095485 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggg 10095425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 297 - 379
Target Start/End: Complemental strand, 6261899 - 6261817
Alignment:
Q  297 tctgtttatgtttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctat 379  Q
    |||||| |||||||||||  |||||| |||||||  |||||||||||||||  ||||||||||||||||||||||| ||||||    
T  6261899 tctgttaatgtttttggcccttttagtgagatttactatatatatcccatgtggcacaaatatttctatatacaccctcctat 6261817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 297 - 379
Target Start/End: Original strand, 36213558 - 36213640
Alignment:
Q  297 tctgtttatgtttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctat 379  Q
    |||||| |||||||||||  |||||| ||||||| ||||||||||||||||  | ||||||||||||||||||||| ||||||    
T  36213558 tctgttaatgtttttggcccttttagtgagatttattatatatatcccatgtggtacaaatatttctatatacaccctcctat 36213640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 444 - 561
Target Start/End: Complemental strand, 14192452 - 14192335
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    |||||||||||||||||||||||   | ||||||||||||||| |     ||||||||||||||  ||||||||| ||| ||||||||||| |||||  |    
T  14192452 gggccctttgttcctaataatgtatcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaatcttcataacaaaacaaataat 14192353  T
Q  544 attttagttgaaaatggg 561  Q
    |||||||| |||||||||    
T  14192352 attttagtagaaaatggg 14192335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 28143897 - 28143837
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  28143897 tcagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtagggg 28143837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 51337307 - 51337366
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  51337307 cagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtagggg 51337366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 447 - 522
Target Start/End: Complemental strand, 23935903 - 23935828
Alignment:
Q  447 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataat 522  Q
    |||||| ||||||||||||||| ||||||||||||| ||| |||   ||||||||||||||||||||||| |||||    
T  23935903 ccctttattcctaataatgtgcctcactaatattaataatattggtgatatttattatccaagaaattggaataat 23935828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 448 - 561
Target Start/End: Original strand, 21319991 - 21320104
Alignment:
Q  448 cctttgttcctaataatgtgcttcactaatattaaaaa-tgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 546  Q
    ||||||||||||||||||||  ||||| |||| ||||| |  ||   |||||||||| |||| ||||| |||||||||| |||||||| |||||| ||||    
T  21319991 cctttgttcctaataatgtgtctcactgatataaaaaaataatggtgatatttattaaccaataaattaggataatttt-ataacaaaacaaattatatt 21320089  T
Q  547 ttagttgaaaatggg 561  Q
    |||||||||||||||    
T  21320090 ttagttgaaaatggg 21320104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 111 - 251
Target Start/End: Complemental strand, 6262079 - 6261938
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg--cccnnnnnnnnnttaagctggagggtgtatatagaaa 208  Q
    ||||||||||||||||||||||||| |||||||||||||||| || || || |||||||||  ||          ||||| || ||||||||||||||||    
T  6262079 cagggccggccctagggcataggccgcgagtgcgacggcctaagg-ccatgccggtagggggcccaaaagtttttttaaggtgtagggtgtatatagaaa 6261981  T
Q  209 tatttggattttgggggatatgtataacaaaattctctgaaaa 251  Q
    |||| ||||||||| || ||| ||||   ||||||||||||||    
T  6261980 tattaggattttggagggtatatatagtcaaattctctgaaaa 6261938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 7414188 - 7414128
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| |||| || |||||||||    
T  7414188 cagggccggtcctaggggataggccacgagtgcgacggcctagagcccatgccggtagggg 7414128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 7460269 - 7460209
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| |||| || |||||||||    
T  7460269 cagggccggtcctaggggataggccacgagtgcgacggcctagagcccatgccggtagggg 7460209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 14192764 - 14192705
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||| || |||||||||    
T  14192764 cagggccggccctagg-cataggccgcgagtgcgacggcctagggcccatgccggtagggg 14192705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 498 - 558
Target Start/End: Original strand, 25201039 - 25201099
Alignment:
Q  498 ttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaat 558  Q
    ||||||||||||||||||||||||||||||||||||| ||||   |||||||||| |||||    
T  25201039 ttattatccaagaaattgggataattttcataacaaaacaaaagatattttagttaaaaat 25201099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 448 - 559
Target Start/End: Complemental strand, 9900187 - 9900076
Alignment:
Q  448 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 547  Q
    |||||||||||| |||||    ||||| ||||||||||| |||   |||||||  ||| ||||||||||||||||||||||||  || | |||| |||||    
T  9900187 cctttgttcctattaatgcatctcactgatattaaaaatattggtgatatttaccatctaagaaattgggataattttcataatgaaacgaattatattt 9900088  T
Q  548 tagttgaaaatg 559  Q
    ||||||||||||    
T  9900087 tagttgaaaatg 9900076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 3665837 - 3665779
Alignment:
Q  194 gggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||||||||||||||||||| ||||||| | ||| ||||||||| ||||||||||||    
T  3665837 gggtgtatatagaaatatttggtttttgggaggtatatataacaaagttctctgaaaag 3665779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 49242561 - 49242622
Alignment:
Q  109 ttcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||||| ||||||||  |||||||||||||||||||||||| | |||||||    
T  49242561 ttcagggccggccctagg-cataggccgggagtgcgacggcctagggcccttgcccgtagggg 49242622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 7414014 - 7413949
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacacc 372  Q
    ||||||||  |||||| |||||||| ||||||||||||||  | ||||||||||||||||||||||    
T  7414014 tttttggcccttttagtgagatttgctatatatatcccatataacacaaatatttctatatacacc 7413949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 7460095 - 7460030
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacacc 372  Q
    ||||||||  |||||| |||||||| ||||||||||||||  | ||||||||||||||||||||||    
T  7460095 tttttggcccttttagtgagatttgctatatatatcccatataacacaaatatttctatatacacc 7460030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 497 - 558
Target Start/End: Complemental strand, 51890508 - 51890447
Alignment:
Q  497 tttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaat 558  Q
    |||||||||||| ||||||| || ||||||||||||||  ||||| ||||||||||||||||    
T  51890508 tttattatccaataaattggaatcattttcataacaaaataaattatattttagttgaaaat 51890447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 497 - 558
Target Start/End: Complemental strand, 51890782 - 51890721
Alignment:
Q  497 tttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaat 558  Q
    |||||||||||| ||||||| || ||||||||||||||  ||||| ||||||||||||||||    
T  51890782 tttattatccaataaattggaatcattttcataacaaaataaattatattttagttgaaaat 51890721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 10095295 - 10095221
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatat--cccatgcagcacaaatatttctatatacaccttcctat 379  Q
    |||||||| ||||||| |||||||| |||||||||  |||||| | ||||||||||||||||| |||| ||||||    
T  10095295 tttttggcctttttagtgagatttgctatatatatatcccatgtaacacaaatatttctatatgcaccctcctat 10095221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 14033775 - 14033729
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggccc 158  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  14033775 cagggccggccctagg-cataggccgcgagtgcgacggcctagggccc 14033729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 36213396 - 36213443
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggccc 158  Q
    ||||||||||||||||||||||||| ||| |||||||||||| |||||    
T  36213396 cagggccggccctagggcataggccgcgaatgcgacggcctacggccc 36213443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 333 - 378
Target Start/End: Complemental strand, 39480496 - 39480451
Alignment:
Q  333 tatatatatcccatgcagcacaaatatttctatatacaccttccta 378  Q
    |||||||||||||||  ||||||||||||||||||||||| |||||    
T  39480496 tatatatatcccatgtggcacaaatatttctatatacaccctccta 39480451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 29283431 - 29283372
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||| | ||||||||  | |||||||||||||||||||||| |||||||||    
T  29283431 cagggccggccctatg-cataggccgtgggtgcgacggcctagggcccttgccggtagggg 29283372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 36213454 - 36213521
Alignment:
Q  184 ttaagctggagggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    ||||| || |||||||||||||||||||||||||||||| || ||| ||||  |||||| |||||||||    
T  36213454 ttaaggtgtagggtgtatatagaaatatttggattttggagg-tatatatagtaaaattatctgaaaag 36213521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 38052595 - 38052638
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctaggg 155  Q
    |||||||||||||||| |||||||| |||||||||||||||||||    
T  38052595 cagggccggccctagg-cataggccgcgagtgcgacggcctaggg 38052638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 52458870 - 52458922
Alignment:
Q  327 atttgttatatatatcccatgcagcacaaatatttctatatacaccttcctat 379  Q
    ||||| ||||||||||||||| | |||||| ||||||||||||||| ||||||    
T  52458870 atttgctatatatatcccatgtatcacaaacatttctatatacaccctcctat 52458922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 52460127 - 52460179
Alignment:
Q  327 atttgttatatatatcccatgcagcacaaatatttctatatacaccttcctat 379  Q
    ||||| ||||||||||||||| | |||||| ||||||||||||||| ||||||    
T  52460127 atttgctatatatatcccatgtatcacaaacatttctatatacaccctcctat 52460179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 448 - 559
Target Start/End: Complemental strand, 56366999 - 56366889
Alignment:
Q  448 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 547  Q
    ||||||||| ||||||||||  ||||||||  ||||| | |||   |||||||||||| ||||||||| || ||| ||| ||||||| ||||   |||||    
T  56366999 cctttgttcttaataatgtgtctcactaattataaaa-tattggtaatatttattatctaagaaattgtgagaatcttcgtaacaaaacaaacgatattt 56366901  T
Q  548 tagttgaaaatg 559  Q
    ||||||||||||    
T  56366900 tagttgaaaatg 56366889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 692
Target Start/End: Complemental strand, 6261523 - 6261489
Alignment:
Q  658 cagatgttgtctaaaaaacatttatttggtagtga 692  Q
    |||||||| ||||||||||||||||||||||||||    
T  6261523 cagatgttatctaaaaaacatttatttggtagtga 6261489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 17648019 - 17647962
Alignment:
Q  113 gggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||| ||||||||  ||||||||||||||| |||||||| | |||||||    
T  17648019 gggccggccctagg-cataggccgggagtgcgacggcctacggcccttgcccgtagggg 17647962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 444 - 506
Target Start/End: Complemental strand, 24612105 - 24612043
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatcc 506  Q
    |||| ||||||||||||||||||   ||||||||||||||||| | ||  |||||||||||||    
T  24612105 gggcactttgttcctaataatgtatctcactaatattaaaaatatcgatgatatttattatcc 24612043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 692
Target Start/End: Original strand, 36213921 - 36213955
Alignment:
Q  658 cagatgttgtctaaaaaacatttatttggtagtga 692  Q
    |||||||| ||||||||||||||||||||||||||    
T  36213921 cagatgttatctaaaaaacatttatttggtagtga 36213955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 480
Target Start/End: Complemental strand, 51890967 - 51890934
Alignment:
Q  447 ccctttgttcctaataatgtgcttcactaatatt 480  Q
    |||||||||||||||||||| |||||||||||||    
T  51890967 ccctttgttcctaataatgttcttcactaatatt 51890934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 10095402 - 10095342
Alignment:
Q  192 gagggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    ||||||||||||||||||||||||||||  ||| |||| ||||  || |||||||| ||||    
T  10095402 gagggtgtatatagaaatatttggatttctgggaatatatatagaaacattctctgcaaag 10095342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 41509568 - 41509528
Alignment:
Q  194 gggtgtatatagaaatatttggattttgggggatatgtata 234  Q
    |||||||||||||||||||||| ||||| ||||| ||||||    
T  41509568 gggtgtatatagaaatatttggtttttgcgggatgtgtata 41509528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 55520402 - 55520346
Alignment:
Q  194 gggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctgaaa 250  Q
    |||||||||||||||||||||  |||| |||||||  ||||||||| ||| ||||||    
T  55520402 gggtgtatatagaaatatttgattttttggggatacatataacaaagttcactgaaa 55520346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 1e-58; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 422 - 594
Target Start/End: Complemental strand, 10994300 - 10994128
Alignment:
Q  422 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 521  Q
    |||||||||||||||       |||||||||||||||||||||||||||| |||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  10994300 aagaaattggtgatatttttttgggccctttgttcctaataatgtgcttcgctaatattaaaaatatcgacgatatttattatccaagaaattgggataa 10994201  T
Q  522 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    |||||||||||||||||||| |||||||||||||||| |||||  |||||||||||||||||||||| |||||    
T  10994200 ttttcataacaaagcaaattatattttagttgaaaatagggtgctaaaatttcagtctacttcgcatttgcta 10994128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 307 - 594
Target Start/End: Original strand, 19156926 - 19157218
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaat 406  Q
    ||||||||  |||||| |||||||| ||||||||||||||| | |||||||||||||||||||||| ||||||            ||||||| |||| ||    
T  19156926 tttttggcccttttagtgagatttgctatatatatcccatgtaacacaaatatttctatatacaccctcctataaaaaaat----ttggttgttcttgat 19157021  T
Q  407 aatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatat 497  Q
    ||||||||| |||||         ||||||||| |||||       ||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||    
T  19157022 aatatgctcaaaaatttattatcgaagaaattgatgatatttttttgggccctttgttcctaataatgtgcttcattaatattaaaaatatcgacgatat 19157121  T
Q  498 ttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  19157122 ttattatccaagaaatgaggataattttcataacaaaacaaattctattttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 19157218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 444 - 594
Target Start/End: Complemental strand, 27941645 - 27941495
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    |||||||||||||||||| |||||||||| ||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27941645 gggccctttgttcctaattatgtgcttcattaatattaaaaatatcgaagatatttattatccaagaaattgggataattttcataacaaagcaaattct 27941546  T
Q  544 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  27941545 attttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 27941495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 444 - 594
Target Start/End: Complemental strand, 53077097 - 53076947
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    |||||||||| |||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  53077097 gggccctttgctcctaataatgtacttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataattttcgtaacaaagcaaattct 53076998  T
Q  544 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  53076997 attttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 53076947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 422 - 594
Target Start/End: Original strand, 25071596 - 25071768
Alignment:
Q  422 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 521  Q
    |||||||||||||||       ||||||||| ||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||| |||||    
T  25071596 aagaaattggtgatatttttttgggcccttttttcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgagataa 25071695  T
Q  522 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    ||||||||||| ||||||||||||||||||||||||| |||||  | |||||||||||||||| |||||||||    
T  25071696 ttttcataacagagcaaattctattttagttgaaaatagggtgctataatttcagtctacttctcatgtgcta 25071768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 444 - 594
Target Start/End: Original strand, 52448118 - 52448268
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||| |||||||||| |||||||||||||||||| | ||| ||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  52448118 gggccctttgttcttaataatgtgtttcactaatattaaaaatatcgacgatatttattatccaagaaattgatataattttcattacaaagcaaattct 52448217  T
Q  544 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 594  Q
    |||||| |||| |||||||||  ||||||||||||||||||||||||||||    
T  52448218 attttatttgataatggggtgctaaaatttcagtctacttcgcatgtgcta 52448268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 317 - 591
Target Start/End: Original strand, 15760702 - 15760981
Alignment:
Q  317 ttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaataatatgctcg 416  Q
    |||||| |||||||| ||||||||||||||| | |||||| ||||||||||||||| ||||||            |||||||||||| |||||||||||     
T  15760702 ttttagtgagatttgctatatatatcccatgtaacacaaaaatttctatatacaccctcctataaaaaaat----ttggttgatcttgataatatgctca 15760797  T
Q  417 aaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatcca 507  Q
    |||||         ||||||| |||||||       ||| ||||||||| |||||| ||||||||||||| |||||||| | ||| ||||||||||||||    
T  15760798 aaaatttattatcgaagaaataggtgatatttttttgggtcctttgttcttaataacgtgcttcactaattttaaaaatatcgacgatatttattatcca 15760897  T
Q  508 agaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtg 591  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||  |||||||| ||||||||| ||||||    
T  15760898 agaaattgggataattttcataacatagcaaattttattttagttgaaaatggagtgctaaaatttccgtctacttcacatgtg 15760981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 444 - 559
Target Start/End: Original strand, 29713781 - 29713896
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    |||||||||||| |||||||||||| ||||||||||||||||| |||   |||||||||||| |||||||||||||||||||||||||||| |||||| |    
T  29713781 gggccctttgttactaataatgtgcctcactaatattaaaaatattggtgatatttattatctaagaaattgggataattttcataacaaaacaaattat 29713880  T
Q  544 attttagttgaaaatg 559  Q
    ||||||||||||||||    
T  29713881 attttagttgaaaatg 29713896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 422 - 560
Target Start/End: Original strand, 47184918 - 47185056
Alignment:
Q  422 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 521  Q
    |||||||||||||||       ||||||||| ||||||||||||| |||||||||||||| |||| |||   ||||||||||||||| ||||||||||||    
T  47184918 aagaaattggtgatatttatttgggccctttcttcctaataatgttcttcactaatattacaaatattggtgatatttattatccaataaattgggataa 47185017  T
Q  522 ttttcataacaaagcaaattctattttagttgaaaatgg 560  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  47185018 ttttcataacaaaacaaattatattttagttgaaaatgg 47185056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 448 - 558
Target Start/End: Original strand, 1698398 - 1698508
Alignment:
Q  448 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 547  Q
    |||||||| |||||||||||||||||||||||||||||| | ||  |||||||||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  1698398 cctttgtttctaataatgtgcttcactaatattaaaaatatcgatgatatttattatccaagaaattgagataattttcctaacaaaacaaattctattt 1698497  T
Q  548 tagttgaaaat 558  Q
     ||||||||||    
T  1698498 aagttgaaaat 1698508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 445 - 559
Target Start/End: Complemental strand, 10993200 - 10993086
Alignment:
Q  445 ggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattcta 544  Q
    |||| ||||||||||||||||||| ||||||||||||||||| |||   ||||||||||||||||||||| ||||||||||||||||||| ||||||  |    
T  10993200 ggccttttgttcctaataatgtgcctcactaatattaaaaatattggtgatatttattatccaagaaatttggataattttcataacaaaacaaatttca 10993101  T
Q  545 ttttagttgaaaatg 559  Q
    |||||||||||||||    
T  10993100 ttttagttgaaaatg 10993086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 451 - 559
Target Start/End: Complemental strand, 44663446 - 44663338
Alignment:
Q  451 ttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttag 550  Q
    |||||||||||||||||| |||||||||||||| || |||   ||||||||||||||||||||||  |||||||||| |||||| |||||| ||||||||    
T  44663446 ttgttcctaataatgtgcctcactaatattaaatatattggtgatatttattatccaagaaattgaaataattttcaaaacaaaacaaattatattttag 44663347  T
Q  551 ttgaaaatg 559  Q
    |||||||||    
T  44663346 ttgaaaatg 44663338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 448 - 560
Target Start/End: Complemental strand, 11640117 - 11640005
Alignment:
Q  448 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 547  Q
    ||||| ||| |||| |||| | ||||||||||||||||| | ||  ||||||||||| |||||||||||||||||||||||||||||  ||||| |||||    
T  11640117 cctttattcataatgatgtacctcactaatattaaaaatatcgatgatatttattattcaagaaattgggataattttcataacaaaataaattttattt 11640018  T
Q  548 tagttgaaaatgg 560  Q
    |||||||||||||    
T  11640017 tagttgaaaatgg 11640005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 304 - 510
Target Start/End: Complemental strand, 24928124 - 24927913
Alignment:
Q  304 atgtttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatctt 403  Q
    |||||||| ||  |||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||            |||| |   |||    
T  24928124 atgttttttgcccttttagtgagatttgctatatatatcccatgcagcacaaatatttctatatacaccctcctat----aaaaaattttggctttactt 24928029  T
Q  404 aataatatgctcgaaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgacca 494  Q
    ||||||||||| ||||||         |||||||| ||||||       ||||||||||||| ||||||||||||||||||||||||||||| | ||| |    
T  24928028 aataatatgcttgaaaatttattatcgaagaaattagtgatattttattgggccctttgttcttaataatgtgcttcactaatattaaaaatatcgacga 24927929  T
Q  495 tatttattatccaaga 510  Q
    ||||||||||||||||    
T  24927928 tatttattatccaaga 24927913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 111 - 252
Target Start/End: Original strand, 19156736 - 19156879
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggta-ggggcccnnnnnnnnnttaagct-ggagggtgtatatagaaa 208  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| |||||||         ||||| |  | |||||||||||||||    
T  19156736 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggggcccaaaaaatctttaaggtaagggggtgtatatagaaa 19156835  T
Q  209 tatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    ||||||||||| ||||||||| ||||  ||||||||||| ||||    
T  19156836 tatttggatttcgggggatatatatagaaaaattctctgtaaag 19156879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 444 - 558
Target Start/End: Complemental strand, 30191298 - 30191185
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||| ||| |||||||||||||| ||||||||||||||| || ||   |||||||||||||||| |||||| ||||||||| ||||||||  ||||| |    
T  30191298 gggccatttattcctaataatgtgtttcactaatattaaatatattagtcatatttattatccaaaaaattgagataatttt-ataacaaaagaaattat 30191200  T
Q  544 attttagttgaaaat 558  Q
    |||||||||||||||    
T  30191199 attttagttgaaaat 30191185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 470 - 558
Target Start/End: Complemental strand, 3918234 - 3918145
Alignment:
Q  470 tcactaatattaaaaatgttgaccatatttattatccaagaaa-ttgggataattttcataacaaagcaaattctattttagttgaaaat 558  Q
    |||||||||||||||||||||   |||||||| |||||| ||| ||||||||||| |||||||||| |||||||||||||||||||||||    
T  3918234 tcactaatattaaaaatgttggtgatatttatcatccaaaaaagttgggataattctcataacaaaacaaattctattttagttgaaaat 3918145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 444 - 561
Target Start/End: Complemental strand, 23045025 - 23044908
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||| ||||||||||||||  | ||||||||||||||  |     ||||||||||||||  ||||||||| ||||||||||||||| |||||| |    
T  23045025 gggccctttattcctaataatgtgtcttactaatattaaaaagatatgtgatatttattatccagaaaattgggagaattttcataacaaaacaaattat 23044926  T
Q  544 attttagttgaaaatggg 561  Q
    ||||||||||||||||||    
T  23044925 attttagttgaaaatggg 23044908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 444 - 561
Target Start/End: Complemental strand, 31885085 - 31884968
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||||||| |||| ||||||||||  ||||| |    
T  31885085 gggccctttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggaaaattctcataacaaaataaattat 31884986  T
Q  544 attttagttgaaaatggg 561  Q
    ||||||||||||||||||    
T  31884985 attttagttgaaaatggg 31884968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 454 - 560
Target Start/End: Original strand, 12893035 - 12893141
Alignment:
Q  454 ttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttg 553  Q
    ||||||| || |||| |||||||||||||| || |||   || ||||||||||||||||||| ||||||||| |||| ||| || |||||||||||||||    
T  12893035 ttcctaagaacgtgcctcactaatattaaatatattggtgatgtttattatccaagaaattgagataatttttataagaaaacatattctattttagttg 12893134  T
Q  554 aaaatgg 560  Q
    |||||||    
T  12893135 aaaatgg 12893141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 53077430 - 53077370
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||    
T  53077430 cagggccggccctagggcataggccacgagtgcgacggcctagggcccatgccgatagggg 53077370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 496 - 559
Target Start/End: Original strand, 53472148 - 53472211
Alignment:
Q  496 atttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatg 559  Q
    |||||||||||||||||||| ||||||||| |||||||| |||||| |||||||||||||||||    
T  53472148 atttattatccaagaaattgagataattttaataacaaaacaaattatattttagttgaaaatg 53472211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 27941978 - 27941916
Alignment:
Q  109 ttcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||    
T  27941978 ttcagggccggccctagggcataagccgcgagtgcgacggcctagggcccatgccggtagggg 27941916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 111 - 252
Target Start/End: Original strand, 52447788 - 52447928
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtaggggcccnnnnnnnnnttaagctggagggtgtatatagaaata 210  Q
    ||||| ||||||||||||||||||| | ||||||||| ||||| ||||||| ||||||||| ||         ||||| | | |||||| ||||||||||    
T  52447788 cagggacggccctagggcataggccgcaagtgcgacgacctagagcccttgccggtagggggcccaaatttttttaaggtag-gggtgtttatagaaata 52447886  T
Q  211 tttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||||||| |||| ||| ||||  ||||||||||||||||    
T  52447887 tttggattttagggggtatatatagtaaaattctctgaaaag 52447928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 23045323 - 23045263
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  23045323 tcagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtagggg 23045263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 31885396 - 31885336
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  31885396 tcagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtagggg 31885336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 447 - 558
Target Start/End: Original strand, 1424675 - 1424782
Alignment:
Q  447 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 546  Q
    |||||||||||||||||||||| |||||||||||| | ||  |   | ||||||||||||||||||||||||||||||| ||||||||  ||| | ||||    
T  1424675 ccctttgttcctaataatgtgcctcactaatattatatat--tagtcgtatttattatccaagaaattgggataatttt-ataacaaa-aaaaatatatt 1424770  T
Q  547 ttagttgaaaat 558  Q
    ||||||||||||    
T  1424771 ttagttgaaaat 1424782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 10994582 - 10994518
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtaggggccc 174  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||| || ||| ||||||||    
T  10994582 tcagggccggccctagggcataggccgcgagtgcgacggtctagggcccatgccggcaggggccc 10994518  T

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Target: chr3; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 25071278 - 25071338
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||  | |||||||||    
T  25071278 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccaagccggtagggg 25071338  T

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Target: chr3; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 444 - 558
Target Start/End: Original strand, 40145441 - 40145552
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    |||||||||||| |||||||||||| ||||||| |||||| |  |||  ||||||||||||||||||| ||||   || ||| |||||||| |||||| |    
T  40145441 gggccctttgtttctaataatgtgcctcactaacattaaatacattgttcatatttattatccaagaatttgg---aaattttataacaaaacaaattat 40145537  T
Q  544 attttagttgaaaat 558  Q
    ||||||||| |||||    
T  40145538 attttagttcaaaat 40145552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 444 - 561
Target Start/End: Complemental strand, 6024894 - 6024777
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    |||||||||||| ||||||||||   | ||||||||||||||| |     ||||||||||||||  ||||||||| ||| ||||||||||| |||||  |    
T  6024894 gggccctttgttgctaataatgtatcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaatcttcataacaaaacaaataat 6024795  T
Q  544 attttagttgaaaatggg 561  Q
    |||||||| |||||||||    
T  6024794 attttagtagaaaatggg 6024777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 15760509 - 15760645
Alignment:
Q  118 ggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtaggggccc-nnnnnnnnnttaagct-ggagggtgtatatagaaatatttgg 215  Q
    |||||| ||||||||||| |||||||||||||||||||||| || ||||||||||||          ||||| |  | ||||||||||||||||||||||    
T  15760509 ggcccttgggcataggccgcgagtgcgacggcctagggcccatgccggtaggggcccaaaattgtttttaaggtaagggggtgtatatagaaatatttgg 15760608  T
Q  216 attttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||| ||||| ||||||||  || |||||||| ||||    
T  15760609 atttcggggggtatgtatagaaatattctctgcaaag 15760645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 459 - 548
Target Start/End: Original strand, 17147208 - 17147296
Alignment:
Q  459 aataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttt 548  Q
    |||||||||  ||||||||||||||||| |||   ||||||||||||||||||||||| |||| ||||||||||||  ||||| ||||||    
T  17147208 aataatgtgtctcactaatattaaaaatattggtgatatttattatccaagaaattggaataa-tttcataacaaaataaattatatttt 17147296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 6025206 - 6025147
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||| || |||||||||    
T  6025206 cagggccggccctagg-cataggccgcgagtgcgacggcctagggcccatgccggtagggg 6025147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 10994420 - 10994348
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctat 379  Q
    ||||||||  |||||| |||||||| ||||||||||||||| | |||||| ||||||||||||||| ||||||    
T  10994420 tttttggctcttttagtgagatttgctatatatatcccatgtaacacaaaaatttctatatacaccctcctat 10994348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 447 - 558
Target Start/End: Complemental strand, 16876999 - 16876891
Alignment:
Q  447 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 546  Q
    ||||||||| |||||||||||  |  ||||||||||| || |||  ||||||||||||||||||||||  || |||||| |||||||| |||||  ||||    
T  16876999 ccctttgtttctaataatgtgtcttgctaatattaaatatattggtcatatttattatccaagaaatt--gagaatttt-ataacaaaacaaataatatt 16876903  T
Q  547 ttagttgaaaat 558  Q
    ||||||||||||    
T  16876902 ttagttgaaaat 16876891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 494 - 558
Target Start/End: Original strand, 4127549 - 4127612
Alignment:
Q  494 atatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaat 558  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||| | | ||||||||||||||    
T  4127549 atatttattatccaagaaattgagataattttcttaacaaa-caaagtattttttagttgaaaat 4127612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 36640722 - 36640769
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggccc 158  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  36640722 tcagggccggccctagg-cataggccgcgagtgcgacggcctagggccc 36640769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 53077238 - 53077166
Alignment:
Q  307 tttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctat 379  Q
    ||||||||  |||||| |||||||| ||||||||||||||| | ||||||  |||||||||||||| ||||||    
T  53077238 tttttggctcttttagtgagatttgctatatatatcccatgtaacacaaaattttctatatacaccctcctat 53077166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 333 - 379
Target Start/End: Original strand, 52448002 - 52448048
Alignment:
Q  333 tatatatatcccatgcagcacaaatatttctatatacaccttcctat 379  Q
    ||||||||||| |||||||||||| ||||||||||||||| ||||||    
T  52448002 tatatatatcctatgcagcacaaaaatttctatatacaccctcctat 52448048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 30376916 - 30376963
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggccc 158  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||||||||    
T  30376916 tcagggccgaccctagg-cataggccgcgagtgcgacggcctagggccc 30376963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 1420253 - 1420207
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggccc 158  Q
    |||||||||||||||| |||||||  ||||||||||||||||||||||    
T  1420253 cagggccggccctagg-cataggctgcgagtgcgacggcctagggccc 1420207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 448 - 559
Target Start/End: Original strand, 6583948 - 6584059
Alignment:
Q  448 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 547  Q
    ||||| ||||||||||||||  | ||||||||||||||| ||    ||||||| ||||||  ||||| ||| ||| ||||  |||||  ||||| |||||    
T  6583948 cctttattcctaataatgtgtcttactaatattaaaaatatttgtgatatttaatatccataaaatttggagaatcttcaccacaaaataaattatattt 6584047  T
Q  548 tagttgaaaatg 559  Q
    ||||||||||||    
T  6584048 tagttgaaaatg 6584059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 22917793 - 22917839
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggccc 158  Q
    |||||||||||||||| |||||||| |||||| |||||||||||||||    
T  22917793 cagggccggccctagg-cataggccgcgagtgtgacggcctagggccc 22917839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 24928217 - 24928166
Alignment:
Q  194 gggtgtatatagaaatatttggattttgggggatatgtataacaaaattctc 245  Q
    ||||||||||||||||||||||||||| |||| ||| ||||  |||||||||    
T  24928217 gggtgtatatagaaatatttggattttagggggtatatatagtaaaattctc 24928166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 450 - 484
Target Start/End: Original strand, 4127314 - 4127348
Alignment:
Q  450 tttgttcctaataatgtgcttcactaatattaaaa 484  Q
    ||||||||||||||||||| |||||||||||||||    
T  4127314 tttgttcctaataatgtgcctcactaatattaaaa 4127348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 692
Target Start/End: Original strand, 52448332 - 52448366
Alignment:
Q  658 cagatgttgtctaaaaaacatttatttggtagtga 692  Q
    |||||||| ||||||||||||||||||||||||||    
T  52448332 cagatgttatctaaaaaacatttatttggtagtga 52448366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 1424344 - 1424403
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||  |||||||  | ||||||||||||||||||| || |||||||||    
T  1424344 cagggccggccctaggt-ataggccgggggtgcgacggcctagggcccatgccggtagggg 1424403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 53077343 - 53077291
Alignment:
Q  194 gggtgtatatagaaatatttggattttgggggatatgtataacaaaattctct 246  Q
    |||||||||||||||||||||||||| || || ||| ||||  ||||||||||    
T  53077343 gggtgtatatagaaatatttggatttcggagggtatatatagaaaaattctct 53077291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 115; Significance: 5e-58; HSPs: 11)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 317 - 588
Target Start/End: Complemental strand, 89319 - 89044
Alignment:
Q  317 ttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaataatatgctcg 416  Q
    |||||| | |||||| |||||||||| ||||||||||||| ||||||||||||||| ||||||            ||| ||| |||||||||||||||||    
T  89319 ttttagtgcgatttgctatatatatcacatgcagcacaaa-atttctatatacaccctcctataaaaaaaa----ttgattgttcttaataatatgctcg 89225  T
Q  417 aaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatcca 507  Q
    |||||         |||||||| ||||||       ||||||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||    
T  89224 aaaatttattatcgaagaaatttgtgatatttttttgggccctttgttcctaataatgtacttcactaatattaaaaatatcgacaatatttattatcca 89125  T
Q  508 agaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcat 588  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  89124 agaaattgagataattttcataacaaagcaaattctattttagttgaaaattgggtgctaaaatttcagtctacttcgcat 89044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 444 - 588
Target Start/End: Complemental strand, 87762 - 87618
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  87762 gggccctttgttcctaataatgtacttcactaatattaaaaatatcgacaatatttattatccaagaaattgagataattttcataacgaagcaaattct 87663  T
Q  544 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcat 588  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  87662 attttagttgaaaatggggtgctaaaatttcagtctacttcgcat 87618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 317 - 584
Target Start/End: Complemental strand, 88368 - 88096
Alignment:
Q  317 ttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaataatatgctcg 416  Q
    |||||| | |||||| |||||||||| ||||||||||||| ||||||||||||||| ||||||            ||| ||| |||||||||||||||||    
T  88368 ttttagtgcgatttgctatatatatcacatgcagcacaaa-atttctatatacaccctcctataaaaaaaaa---ttgattgttcttaataatatgctcg 88273  T
Q  417 aaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatcca 507  Q
    |||||         |||||||| ||||||       ||||||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||    
T  88272 aaaatttattatcgaagaaatttgtgatatttttttgggccctttgttcctaataatgtacttcactaatattaaaaatatcgacaatatttattatcca 88173  T
Q  508 agaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttc 584  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||    
T  88172 agaaattgagataattttcataacaaagcaaattctattttagttgaaaattgggtgctaaaatttcagtctacttc 88096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 317 - 584
Target Start/End: Complemental strand, 88844 - 88572
Alignment:
Q  317 ttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctatnnnnnnnnnnnnttggttgatcttaataatatgctcg 416  Q
    |||||| | |||||| |||||||||| ||||||||||||| ||||||||||||||| ||||||            ||| ||| |||||||||||||||||    
T  88844 ttttagtgcgatttgctatatatatcacatgcagcacaaa-atttctatatacaccctcctataaaaaaaaa---ttgattgttcttaataatatgctcg 88749  T
Q  417 aaaat---------aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatcca 507  Q
    |||||         |||||||| ||||||       ||||||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||    
T  88748 aaaatttattatcgaagaaatttgtgatatttttttgggccctttgttcctaataatgtacttcactaatattaaaaatatcgacaatatttattatcca 88649  T
Q  508 agaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttc 584  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||    
T  88648 agaaattgagataattttcataacaaagcaaattctattttagttgaaaattgggtgctaaaatttcagtctacttc 88572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 110 - 252
Target Start/End: Complemental strand, 89518 - 89377
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggta-ggggcccnnnnnnnnnttaagctggagggtgtatatagaaa 208  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||         ||||| ||||  ||||||||| |||    
T  89518 tcagggccggccctaaggcataggccccgagtgcgacggcctagggcccttgtcggtagggggcccaaattttttttaagatgga--gtgtatataaaaa 89421  T
Q  209 tatttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    ||||||||||||||| | ||| |||| |||||||| ||||||||    
T  89420 tatttggattttgggaggtatatatagcaaaattcactgaaaag 89377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 110 - 252
Target Start/End: Complemental strand, 88092 - 87950
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtaggggcccnnnnnnnnnttaagctggagggtgtatatagaaat 209  Q
    ||||||||||| ||| |||||||||| ||||||||||||||||||||||||  ||||||||| ||         ||||| ||| | ||||||||| ||||    
T  88092 tcagggccggcactaaggcataggccgcgagtgcgacggcctagggccctttccggtagggggcccaaaagaatttaagatggggagtgtatataaaaat 87993  T
Q  210 atttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||||||||||||| ||| |||| |||||||| ||||||||    
T  87992 atttggattttggggggtatatatagcaaaattcactgaaaag 87950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 110 - 252
Target Start/End: Complemental strand, 88568 - 88426
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtaggggcccnnnnnnnnnttaagctggagggtgtatatagaaat 209  Q
    ||||||||||| ||| || ||||||| ||||||||||||||||||||||||  ||||||||| ||         ||||| ||| ||||||||||| ||||    
T  88568 tcagggccggcactaaggtataggccgcgagtgcgacggcctagggccctttccggtagggggcccaaaagaatttaagatggggggtgtatataaaaat 88469  T
Q  210 atttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||||||||||||| ||| |||| |||||||| ||||||||    
T  88468 atttggattttggggggtatatatagcaaaattcactgaaaag 88426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 110 - 252
Target Start/End: Complemental strand, 89044 - 88902
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtaggggcccnnnnnnnnnttaagctggagggtgtatatagaaat 209  Q
    ||||||||||| ||| || ||||||| ||||||||||||||||||||||||  ||||||||| ||         ||||| ||| ||||||||||| ||||    
T  89044 tcagggccggcactaaggtataggccgcgagtgcgacggcctagggccctttccggtagggggcccaaaagaatttaagatggggggtgtatataaaaat 88945  T
Q  210 atttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||||||||||||| ||| |||| |||||||| ||||||||    
T  88944 atttggattttggggggtatatatagcaaaattcactgaaaag 88902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 110 - 252
Target Start/End: Complemental strand, 87618 - 87477
Alignment:
Q  110 tcagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtaggggcccnnnnnnnnnttaagctggagggtgtatatagaaat 209  Q
    ||||||||||||||| ||||||||   ||||||||||||| ||||||||||  |||||||| |||         ||||| ||| ||||||||||| ||||    
T  87618 tcagggccggccctaaggcatagggtgcgagtgcgacggcgtagggccctttccggtagggtcccaaaagaat-ttaagatggggggtgtatataaaaat 87520  T
Q  210 atttggattttgggggatatgtataacaaaattctctgaaaag 252  Q
    |||||||||||||||||||| |||| ||||||||  |||||||    
T  87519 atttggattttgggggatatatatagcaaaattcattgaaaag 87477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 87419 - 87358
Alignment:
Q  317 ttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctat 379  Q
    |||||| | |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  87419 ttttagtgcgatttgctatatatatcccatgcagcacaaa-atttctatatacaccctcctat 87358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 87892 - 87831
Alignment:
Q  317 ttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctat 379  Q
    |||||| | |||||| |||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  87892 ttttagtgcgatttgctatatatatcacatgcagcacaaa-atttctatatacaccctcctat 87831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 445 - 559
Target Start/End: Original strand, 1289 - 1403
Alignment:
Q  445 ggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattcta 544  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||    ||||||||||||||| |||||| ||| |||||||||||||| |||||||||    
T  1289 ggccctttgttcctaataatgtgcctcactaatattaaaaatatttgtgatatttattatccaataaattgagattattttcataacaaaacaaattcta 1388  T
Q  545 ttttagttgaaaatg 559  Q
    |||||||||||||||    
T  1389 ttttagttgaaaatg 1403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 71; Significance: 8e-32; HSPs: 4)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 422 - 549
Target Start/End: Original strand, 50881 - 51008
Alignment:
Q  422 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 521  Q
    |||||||||||||||       ||| |||||| |||||||||||| ||||| | ||||||||||| | ||| ||||||||||||||||||||||||||||    
T  50881 aagaaattggtgatatttttttgggtcctttgctcctaataatgtacttcattgatattaaaaatatcgacgatatttattatccaagaaattgggataa 50980  T
Q  522 ttttcataacaaagcaaattctatttta 549  Q
    ||||| ||||||||||||||||||||||    
T  50981 ttttcgtaacaaagcaaattctatttta 51008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 50565 - 50625
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||||||||||| | |||||||||||||||||| | || |||||||||    
T  50565 cagggccggccctagggcataggccgcaagtgcgacggcctagggcacatgccggtagggg 50625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 50656 - 50707
Alignment:
Q  194 gggtgtatatagaaatatttggattttgggggatatgtataacaaaattctc 245  Q
    |||||||||||||||||||||||||| ||||| ||| ||||| |||||||||    
T  50656 gggtgtatatagaaatatttggatttcggggggtatatataaaaaaattctc 50707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 377
Target Start/End: Original strand, 50771 - 50831
Alignment:
Q  317 ttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcct 377  Q
    |||||| ||||||||||||||||||||| || | ||||||  |||||||||||||| ||||    
T  50771 ttttagtgagatttgttatatatatcccctgtaacacaaaattttctatatacaccctcct 50831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 448 - 559
Target Start/End: Complemental strand, 18724 - 18613
Alignment:
Q  448 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 547  Q
    ||||||||||||||||||||| ||||||||||||||||| |||   ||||||||||||||| |||||| ||| ||||| |||||||| |||||| |||||    
T  18724 cctttgttcctaataatgtgcctcactaatattaaaaatattggtgatatttattatccaataaattgagattatttttataacaaaacaaattttattt 18625  T
Q  548 tagttgaaaatg 559  Q
    ||||||||||||    
T  18624 tagttgaaaatg 18613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 447 - 559
Target Start/End: Complemental strand, 2555 - 2443
Alignment:
Q  447 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 546  Q
    ||||||||||||||||||||| |||||||||||||||||| ||    ||||||||||| ||| |||||| |||||||| ||||||||| |||||| ||||    
T  2555 ccctttgttcctaataatgtgtttcactaatattaaaaatattagtgatatttattattcaataaattgagataatttgcataacaaaacaaattatatt 2456  T
Q  547 ttagttgaaaatg 559  Q
    |||||||||||||    
T  2455 ttagttgaaaatg 2443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 448 - 558
Target Start/End: Original strand, 25097 - 25207
Alignment:
Q  448 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 547  Q
    ||||||||||||||||||||  ||||||||||||||||| |||   |||||||||||||||||||||| |||||| ||||| ||||| ||||||  ||||    
T  25097 cctttgttcctaataatgtgtctcactaatattaaaaatattggtgatatttattatccaagaaattgagataatattcatgacaaaccaaattaaattt 25196  T
Q  548 tagttgaaaat 558  Q
    |||||||||||    
T  25197 tagttgaaaat 25207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 450 - 559
Target Start/End: Original strand, 40797 - 40906
Alignment:
Q  450 tttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttta 549  Q
    ||||||||||||||||||| | ||||||||||||||| ||    ||||||||||||||||||||||  ||||||| ||||||||| |||||| |||||||    
T  40797 tttgttcctaataatgtgcctaactaatattaaaaatatttgtgatatttattatccaagaaattgaaataatttacataacaaaacaaattatatttta 40896  T
Q  550 gttgaaaatg 559  Q
    ||||||||||    
T  40897 gttgaaaatg 40906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0743 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 444 - 558
Target Start/End: Complemental strand, 3432 - 3318
Alignment:
Q  444 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 543  Q
    ||||||||||||||||||||| ||  | ||||||||||||||| |     |||||||||||| || ||||||||| ||||||||||||||| |||||| |    
T  3432 gggccctttgttcctaataatatgtcttactaatattaaaaatatatgtgatatttattatctaaaaaattgggagaattttcataacaaaacaaattat 3333  T
Q  544 attttagttgaaaat 558  Q
    |||||||||||||||    
T  3332 attttagttgaaaat 3318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0743; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 3741 - 3696
Alignment:
Q  112 agggccggccctagggcataggccacgagtgcgacggcctagggccc 158  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  3741 agggccggccctagg-cataggccatgagtgcgacggcctagggccc 3696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 6428 - 6488
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  6428 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccttgccggtagggg 6488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1364 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold1364
Description:

Target: scaffold1364; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 498 - 559
Target Start/End: Original strand, 873 - 934
Alignment:
Q  498 ttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatg 559  Q
    ||||||||| |||||||| ||| |||||||||||||| ||||||||||||||||||||||||    
T  873 ttattatcctagaaattgagattattttcataacaaaacaaattctattttagttgaaaatg 934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 470 - 558
Target Start/End: Complemental strand, 21544 - 21455
Alignment:
Q  470 tcactaatattaaaaatgttgaccatatttattatccaagaaa-ttgggataattttcataacaaagcaaattctattttagttgaaaat 558  Q
    |||||||||||||||||||||   |||||||| |||||| ||| ||||||||||| ||||||||||  |||||||||||||||| |||||    
T  21544 tcactaatattaaaaatgttggtgatatttatcatccaaaaaagttgggataattctcataacaaaataaattctattttagttaaaaat 21455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 12550 - 12490
Alignment:
Q  111 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| || |||||||||    
T  12550 cagggccggccctagggcataggccgcgagtgcgacgtcctagggcccatgccggtagggg 12490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 308 - 379
Target Start/End: Complemental strand, 12361 - 12290
Alignment:
Q  308 ttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatatacaccttcctat 379  Q
    ||||||| ||||||| || ||||| ||||||||||||||| | ||||||  |||||| ||||||| ||||||    
T  12361 ttttggcctttttagtgatatttgctatatatatcccatgtaacacaaaattttctacatacaccctcctat 12290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 498 - 559
Target Start/End: Complemental strand, 98425 - 98364
Alignment:
Q  498 ttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatg 559  Q
    ||||||| |||||||||| ||| |||||||||| |||  |||||||||||||||||||||||    
T  98425 ttattattcaagaaattgagattattttcataataaaataaattctattttagttgaaaatg 98364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 494 - 560
Target Start/End: Complemental strand, 60606 - 60538
Alignment:
Q  494 atatttattatccaagaaattgggataattttcataacaaagcaa---attctattttagttgaaaatgg 560  Q
    |||||||||| ||||||| ||| |||||||||||||||||| |||   ||| ||||||||||||||||||    
T  60606 atatttattacccaagaa-ttgagataattttcataacaaaacaaattattatattttagttgaaaatgg 60538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 4627 - 4672
Alignment:
Q  126 ggcataggccacgagtgcgacggcctagggcccttgtcggtagggg 171  Q
    |||||||||| ||||||||| ||||||||||||||  |||||||||    
T  4627 ggcataggccgcgagtgcgatggcctagggcccttaccggtagggg 4672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 194 - 250
Target Start/End: Original strand, 14163 - 14219
Alignment:
Q  194 gggtgtatatagaaatatttggattttgggggatatgtataacaaaattctctgaaa 250  Q
    |||||||||||||||||||||  ||||||||| ||| |||| |||| ||| ||||||    
T  14163 gggtgtatatagaaatatttgatttttggggggtatttatagcaaagttcactgaaa 14219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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