View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0812_low_65 (Length: 425)
Name: NF0812_low_65
Description: NF0812
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0812_low_65 |
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Alignment Details
Target: chr2 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 109 - 414
Target Start/End: Original strand, 7380150 - 7380455
Alignment:
| Q |
109 |
aagtcatcttatgttgtgttgtgcaagttctccttaaatgagataagcacaaaggctgcgtgtggtactatactatgcaccccatgaatttaattaattt |
208 |
Q |
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| T |
7380150 |
aagtcatcttatgttgtgttgtgcaagttctccttaaatgagataagcacaaaggctgcgtgtggtactatactatgcaccccatgaatttaattaattt |
7380249 |
T |
|
| Q |
209 |
atctagaaagtcagaaaggtgctacacctcatctcattcgtcatttggtcatatatgtagaacaagaaaaatacccttattccccaagatagtcacatgt |
308 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
7380250 |
atctagaaagtcagaaaggtgctacacctcatctcattcgtcatttggtcatatatgtagaacaagaaaaatacccttattcctcaagatagtcacatgt |
7380349 |
T |
|
| Q |
309 |
taatgttggactttaattaatagaaacctctagactatacctccatctcaaattaatccaaaccaccttaattaatctcccctttaaatattaaatccac |
408 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7380350 |
taatgttggactttaattaatagaaacctctagactatacctccatctcaaattaatccaaaccaccttaattaatctcccctttaaatattaaatccac |
7380449 |
T |
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| Q |
409 |
atctct |
414 |
Q |
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|||||| |
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| T |
7380450 |
atctct |
7380455 |
T |
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