View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0812_low_76 (Length: 389)

Name: NF0812_low_76
Description: NF0812
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0812_low_76
NF0812_low_76
[»] chr7 (6 HSPs)
chr7 (98-389)||(43520005-43520300)
chr7 (332-381)||(11017268-11017317)
chr7 (334-388)||(18385308-18385362)
chr7 (331-388)||(1044081-1044138)
chr7 (332-381)||(14927836-14927885)
chr7 (332-381)||(16581074-16581123)
[»] chr5 (7 HSPs)
chr5 (332-381)||(15395054-15395103)
chr5 (331-375)||(8771115-8771159)
chr5 (331-381)||(3666719-3666769)
chr5 (332-381)||(13300690-13300739)
chr5 (332-381)||(23976765-23976814)
chr5 (332-381)||(32460748-32460797)
chr5 (332-381)||(41099518-41099567)
[»] chr1 (7 HSPs)
chr1 (332-381)||(40232592-40232641)
chr1 (331-375)||(19727216-19727260)
chr1 (331-381)||(23285016-23285066)
chr1 (332-381)||(1067264-1067313)
chr1 (332-381)||(8267072-8267121)
chr1 (332-381)||(8273356-8273405)
chr1 (332-381)||(21498639-21498688)
[»] chr2 (7 HSPs)
chr2 (331-375)||(7559529-7559573)
chr2 (331-381)||(17327876-17327926)
chr2 (331-373)||(30640188-30640230)
chr2 (332-381)||(17452786-17452835)
chr2 (332-381)||(25375752-25375801)
chr2 (332-381)||(34070407-34070456)
chr2 (331-387)||(3238614-3238670)
[»] chr8 (6 HSPs)
chr8 (350-389)||(15197625-15197664)
chr8 (332-381)||(4582480-4582529)
chr8 (332-381)||(23915337-23915386)
chr8 (332-381)||(25733382-25733431)
chr8 (332-381)||(37772550-37772599)
chr8 (331-387)||(14036302-14036358)
[»] chr6 (3 HSPs)
chr6 (333-388)||(15645534-15645589)
chr6 (332-381)||(2077657-2077706)
chr6 (332-381)||(6111962-6112011)
[»] chr3 (4 HSPs)
chr3 (331-381)||(631809-631859)
chr3 (332-381)||(30216-30265)
chr3 (332-381)||(8223923-8223972)
chr3 (332-381)||(10585391-10585440)
[»] scaffold0863 (1 HSPs)
scaffold0863 (332-381)||(112-161)
[»] scaffold0575 (1 HSPs)
scaffold0575 (332-381)||(5081-5130)
[»] scaffold0232 (1 HSPs)
scaffold0232 (332-381)||(22737-22786)
[»] scaffold0061 (1 HSPs)
scaffold0061 (332-381)||(49164-49213)
[»] scaffold0060 (2 HSPs)
scaffold0060 (332-381)||(47174-47223)
scaffold0060 (332-381)||(52118-52167)
[»] scaffold0045 (1 HSPs)
scaffold0045 (332-381)||(83768-83817)
[»] scaffold0035 (1 HSPs)
scaffold0035 (332-381)||(6717-6766)
[»] scaffold0017 (1 HSPs)
scaffold0017 (332-381)||(149421-149470)
[»] scaffold0015 (1 HSPs)
scaffold0015 (332-381)||(192804-192853)
[»] scaffold0009 (1 HSPs)
scaffold0009 (332-381)||(71960-72009)
[»] chr4 (2 HSPs)
chr4 (332-381)||(7902312-7902361)
chr4 (332-381)||(39320407-39320456)


Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 98 - 389
Target Start/End: Original strand, 43520005 - 43520300
Alignment:
Q  98 atttccccaatccaacaacttcaccttatcgtttaacaaatacaagaattgcaaataagaaacaatcttatggaaatgaaatgaaataaagattgcatgt 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43520005 atttccccaatccaacaacttcaccttatcgtttaacaaatacaagaattgcaaatatgaaacaatcttatggaaatgaaatgaaataaagattgcatgt 43520104  T
Q  198 gtgtttattcaaaaacaatcaatctgtagaaaacaacaatnnnnnnntattcttctgaatgcacacagctaaattcttctcaacaacaatatatatttgt 297  Q
    ||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43520105 gtgtttattcaaaaacaatcaatctgtagaaaacaacaataaaaaaaaattcttctgaatgcacacagctaaattcttcttaacaacaatatatatttgt 43520204  T
Q  298 gtgtgttcgcgcatg----cgtatgaaatattcttctaaatattttggaacacagtctgaaatattttggttcgcaatctaaaatattatggtatt 389  Q
    |||||||||||||||    ||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  43520205 gtgtgttcgcgcatgcgtacgtatcaaatattcttctaaatattttggaacacaatccgaaatattttggttcgcaatctaaaatattatggtatt 43520300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 11017268 - 11017317
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||||||| ||||||||||||||||  ||||||||| |||||    
T  11017268 aatattttggaacacaatctgaaatattttggtaggcaatctaatatatt 11017317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 334 - 388
Target Start/End: Complemental strand, 18385362 - 18385308
Alignment:
Q  334 tattttggaacacagtctgaaatattttggttcgcaatctaaaatattatggtat 388  Q
    |||||||||| ||| |||||||||||||||||| |||| | ||||||| ||||||    
T  18385362 tattttggaaaacaatctgaaatattttggttcacaatttgaaatattttggtat 18385308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 388
Target Start/End: Complemental strand, 1044138 - 1044081
Alignment:
Q  331 aaatattttggaacacagtctgaaatattttggttcgcaatctaaaatattatggtat 388  Q
    |||||||||||||| || |||||||||||||  | | |||||||||||||| ||||||    
T  1044138 aaatattttggaacgcaatctgaaatattttcatgcacaatctaaaatattttggtat 1044081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 14927836 - 14927885
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    ||||||||| |||||| ||||||||||||||||  ||||||||| |||||    
T  14927836 aatattttgcaacacaatctgaaatattttggtaggcaatctaatatatt 14927885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 16581123 - 16581074
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    ||||||||| |||||| ||||||||||||||||  ||||||||| |||||    
T  16581123 aatattttgcaacacaatctgaaatattttggtaggcaatctaatatatt 16581074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000006; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 15395054 - 15395103
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||||||||||||||||||||||||   |||||||| |||||    
T  15395054 aatattttggaacacagtctgaaatattttggtaaacaatctaatatatt 15395103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 8771159 - 8771115
Alignment:
Q  331 aaatattttggaacacagtctgaaatattttggttcgcaatctaa 375  Q
    ||||||||||||||||| ||||||||||||||||  |||||||||    
T  8771159 aaatattttggaacacaatctgaaatattttggtaggcaatctaa 8771115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 3666769 - 3666719
Alignment:
Q  331 aaatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    ||||||||||||||||| |||||||||||| |||  ||||||||| |||||    
T  3666769 aaatattttggaacacaatctgaaatatttgggtaggcaatctaatatatt 3666719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 13300690 - 13300739
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||| ||| ||||||||||||||||  ||||||||| |||||    
T  13300690 aatattttggaatacaatctgaaatattttggtaagcaatctaatatatt 13300739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 23976765 - 23976814
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||||||| ||||||||||||||||  | ||||||| |||||    
T  23976765 aatattttggaacacaatctgaaatattttggtaggtaatctaatatatt 23976814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 32460748 - 32460797
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||||||| |||||||||||| |||  ||||||||| |||||    
T  32460748 aatattttggaacacaatctgaaatatttgggtaggcaatctaatatatt 32460797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 41099567 - 41099518
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||||||| ||| ||||||||||||  ||||||||| |||||    
T  41099567 aatattttggaacacaatctaaaatattttggtaggcaatctaatatatt 41099518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000006; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 40232592 - 40232641
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||||||| ||||||||||||||||  ||||||||| |||||    
T  40232592 aatattttggaacacaatctgaaatattttggtaggcaatctaatatatt 40232641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 19727260 - 19727216
Alignment:
Q  331 aaatattttggaacacagtctgaaatattttggttcgcaatctaa 375  Q
    |||||||||| |||||| ||||||||||||||||| |||||||||    
T  19727260 aaatattttgaaacacaatctgaaatattttggttggcaatctaa 19727216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 23285016 - 23285066
Alignment:
Q  331 aaatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||||| || |||||||||||||||| | |||||| |||||||    
T  23285016 aaatattttggaacgcaatctgaaatattttggtgcacaatctgaaatatt 23285066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 1067313 - 1067264
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||||||| ||||||||||||||||   |||||||| |||||    
T  1067313 aatattttggaacacaatctgaaatattttggtagacaatctaatatatt 1067264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 8267072 - 8267121
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||||||| ||||||||||||||||   |||||||| |||||    
T  8267072 aatattttggaacacaatctgaaatattttggtagacaatctaatatatt 8267121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 8273356 - 8273405
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||| ||| ||||||||||||||||  ||||||||| |||||    
T  8273356 aatattttggaatacattctgaaatattttggtatgcaatctaatatatt 8273405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 21498688 - 21498639
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||||||| ||| ||||||||||||  ||||||||| |||||    
T  21498688 aatattttggaacacaatctaaaatattttggtaggcaatctaatatatt 21498639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 7559529 - 7559573
Alignment:
Q  331 aaatattttggaacacagtctgaaatattttggttcgcaatctaa 375  Q
    ||||||||||||||||| ||||||||||||||||  |||||||||    
T  7559529 aaatattttggaacacaatctgaaatattttggtaggcaatctaa 7559573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 17327926 - 17327876
Alignment:
Q  331 aaatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    ||||||||||||||| | ||||||||||||||||  ||||||||| |||||    
T  17327926 aaatattttggaacagaatctgaaatattttggtatgcaatctaatatatt 17327876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 373
Target Start/End: Original strand, 30640188 - 30640230
Alignment:
Q  331 aaatattttggaacacagtctgaaatattttggttcgcaatct 373  Q
    ||||||||||||||||| | |||||||||||||| ||||||||    
T  30640188 aaatattttggaacacaatttgaaatattttggtacgcaatct 30640230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 17452786 - 17452835
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||||||| | ||||||||||||||  ||||||||| |||||    
T  17452786 aatattttggaacacaatttgaaatattttggtaggcaatctaatatatt 17452835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 25375801 - 25375752
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||||||| ||||||||||||||||  ||||| ||| |||||    
T  25375801 aatattttggaacacaatctgaaatattttggtaggcaatttaatatatt 25375752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 34070456 - 34070407
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||||||| ||| ||||||||||||  ||||||||| |||||    
T  34070456 aatattttggaacacaatctaaaatattttggtaggcaatctaatatatt 34070407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 387
Target Start/End: Original strand, 3238614 - 3238670
Alignment:
Q  331 aaatattttggaacacagtctgaaatattttggttcgcaatctaaaatattatggta 387  Q
    ||||||||||||||| | |||||||||||||||| | |||||  ||||||| |||||    
T  3238614 aaatattttggaacataatctgaaatattttggtacacaatcataaatattttggta 3238670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000009; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 389
Target Start/End: Complemental strand, 15197664 - 15197625
Alignment:
Q  350 ctgaaatattttggttcgcaatctaaaatattatggtatt 389  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  15197664 ctgaaatattttggtacacaatctaaaatattatggtatt 15197625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 4582480 - 4582529
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||||||| ||| ||||||||||||  ||||||||| |||||    
T  4582480 aatattttggaacacaatctaaaatattttggtaggcaatctaatatatt 4582529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 23915386 - 23915337
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    ||||||||| |||||| ||||||||||||||||  ||||||||| |||||    
T  23915386 aatattttgcaacacaatctgaaatattttggtaggcaatctaatatatt 23915337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 25733382 - 25733431
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    ||||||||| |||||| ||||||||||||||||  ||||||||| |||||    
T  25733382 aatattttgcaacacaatctgaaatattttggtaggcaatctaatatatt 25733431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 37772599 - 37772550
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||| ||| ||||||||||||||||  ||||||||| |||||    
T  37772599 aatattttggaatacaatctgaaatattttggtaagcaatctaatatatt 37772550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 387
Target Start/End: Complemental strand, 14036358 - 14036302
Alignment:
Q  331 aaatattttggaacacagtctgaaatattttggttcgcaatctaaaatattatggta 387  Q
    |||||||||||||| || |||||||||||||| |  ||||||||| ||||| |||||    
T  14036358 aaatattttggaacgcaatctgaaatattttgatatgcaatctaatatattttggta 14036302  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000009; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 333 - 388
Target Start/End: Complemental strand, 15645589 - 15645534
Alignment:
Q  333 atattttggaacacagtctgaaatattttggttcgcaatctaaaatattatggtat 388  Q
    |||||||||||| || | |||||||||||||| | |||||||||||||| ||||||    
T  15645589 atattttggaacgcaatatgaaatattttggtgcacaatctaaaatattttggtat 15645534  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 2077706 - 2077657
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    ||||||||| |||||| ||||||||||||||||  ||||||||| |||||    
T  2077706 aatattttgcaacacaatctgaaatattttggtaggcaatctaatatatt 2077657  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 6111962 - 6112011
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||||||| ||||||||||||||||   |||||||| |||||    
T  6111962 aatattttggaacacaatctgaaatattttggtagacaatctaatatatt 6112011  T

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Target: chr3 (Bit Score: 31; Significance: 0.00000003; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 631859 - 631809
Alignment:
Q  331 aaatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    ||||||||||||| ||| ||||||||||||||||  ||||||||| |||||    
T  631859 aaatattttggaatacaatctgaaatattttggtaggcaatctaatatatt 631809  T

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Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 30265 - 30216
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||||||| ||| ||||||||||||  ||||||||| |||||    
T  30265 aatattttggaacacaatctaaaatattttggtaggcaatctaatatatt 30216  T

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Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 8223972 - 8223923
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||||||| ||| ||||||||||||  ||||||||| |||||    
T  8223972 aatattttggaacacaatctaaaatattttggtaagcaatctaatatatt 8223923  T

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Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 10585391 - 10585440
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||| ||| ||||||||||||||||  ||||||||| |||||    
T  10585391 aatattttggaatacaatctgaaatattttggtaagcaatctaatatatt 10585440  T

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Target: scaffold0863 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 161 - 112
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||||||| ||| ||||||||||||  ||||||||| |||||    
T  161 aatattttggaacacaatctaaaatattttggtaggcaatctaatatatt 112  T

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Target: scaffold0575 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 5081 - 5130
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    ||||||||| |||||| ||||||||||||||||  ||||||||| |||||    
T  5081 aatattttgcaacacaatctgaaatattttggtaggcaatctaatatatt 5130  T

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Target: scaffold0232 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 22786 - 22737
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    ||||||||| |||||| ||||||||||||||||  ||||||||| |||||    
T  22786 aatattttgcaacacaatctgaaatattttggtaggcaatctaatatatt 22737  T

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Target: scaffold0061 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 49164 - 49213
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||| ||| ||||||||||||||||  ||||||||| |||||    
T  49164 aatattttggaatacaatctgaaatattttggtaggcaatctaatatatt 49213  T

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Target: scaffold0060 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 47174 - 47223
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||| ||| ||||||||||||||||  ||||||||| |||||    
T  47174 aatattttggaatacaatctgaaatattttggtaagcaatctaatatatt 47223  T

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Target: scaffold0060; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 52118 - 52167
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||| ||| ||||||||||||||||  ||||||||| |||||    
T  52118 aatattttggaatacaatctgaaatattttggtaagcaatctaatatatt 52167  T

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Target: scaffold0045 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 83817 - 83768
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    ||||||||||||| || ||||||||||||||||  ||||||||| |||||    
T  83817 aatattttggaacgcaatctgaaatattttggtaggcaatctaatatatt 83768  T

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Target: scaffold0035 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 6717 - 6766
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    ||||||||| |||||| ||||||||||||||||  ||||||||| |||||    
T  6717 aatattttgcaacacaatctgaaatattttggtaagcaatctaatatatt 6766  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 149470 - 149421
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||| ||| ||||||||||||||||  ||||||||| |||||    
T  149470 aatattttggaatacaatctgaaatattttggtaggcaatctaatatatt 149421  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 192804 - 192853
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||||||| ||| ||||||||||||  ||||||||| |||||    
T  192804 aatattttggaacacaatctaaaatattttggtaggcaatctaatatatt 192853  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 72009 - 71960
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||||||| ||||||||||||| ||  ||||||||| |||||    
T  72009 aatattttggaacacaatctgaaatattttagtatgcaatctaatatatt 71960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 7902312 - 7902361
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||| ||| ||||||||||||||||  ||||||||| |||||    
T  7902312 aatattttggaatacaatctgaaatattttggtaagcaatctaatatatt 7902361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 39320456 - 39320407
Alignment:
Q  332 aatattttggaacacagtctgaaatattttggttcgcaatctaaaatatt 381  Q
    |||||||||||||||| |||||||||||||||   ||||||||| |||||    
T  39320456 aatattttggaacacaatctgaaatattttggcaggcaatctaatatatt 39320407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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