View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0813_low_12 (Length: 333)
Name: NF0813_low_12
Description: NF0813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0813_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 9 - 272
Target Start/End: Complemental strand, 32146284 - 32146021
Alignment:
| Q |
9 |
caacaatattggatcatatacatatatatggattctagaaagacgaaactactgaagagctggcaaccaagccagagaggagagcaactaaaagtgcatt |
108 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32146284 |
caacaaaattggatcatatacatatatatggattctagaaagacgaaactactgaagagctggcaaccaagccagagaggagagcaactaaaagtgcatt |
32146185 |
T |
|
| Q |
109 |
actgtaagtggtaggttcagcctgcattgagttcttcctaaaatcattatatgtctcattgaagaaggggccacccactatagctccaaatgccacatta |
208 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32146184 |
actgtaagtggtaggttcagcctgcattgagttgttcctaaaatcattatatgtctcattgaagaaggggccacccactatagctccaaatgccacatta |
32146085 |
T |
|
| Q |
209 |
ggatttggttgaggtgagtcataccacttgaatccatccttgcacccagttttagcattaactg |
272 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32146084 |
ggatttggttgaggtgagtcataccacttgaatccatccttgcacccagttttagcattaactg |
32146021 |
T |
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