View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0813_low_18 (Length: 257)

Name: NF0813_low_18
Description: NF0813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0813_low_18
NF0813_low_18
[»] chr7 (108 HSPs)
chr7 (19-250)||(25628480-25628711)
chr7 (17-250)||(42618104-42618337)
chr7 (13-250)||(10600142-10600379)
chr7 (15-250)||(22081558-22081792)
chr7 (20-250)||(23058622-23058852)
chr7 (20-250)||(32068289-32068519)
chr7 (20-250)||(32934541-32934771)
chr7 (20-250)||(43266269-43266499)
chr7 (17-250)||(25453321-25453554)
chr7 (4-202)||(42617898-42618096)
chr7 (17-250)||(46205502-46205735)
chr7 (19-202)||(32068098-32068281)
chr7 (17-205)||(28890579-28890767)
chr7 (20-202)||(43266507-43266689)
chr7 (17-200)||(32934348-32934531)
chr7 (20-202)||(25628719-25628901)
chr7 (20-196)||(25453131-25453307)
chr7 (20-202)||(27138182-27138364)
chr7 (20-198)||(33828219-33828397)
chr7 (17-195)||(46204421-46204599)
chr7 (15-200)||(22081803-22081987)
chr7 (17-192)||(39274870-39275045)
chr7 (20-195)||(23058432-23058607)
chr7 (26-199)||(18087584-18087757)
chr7 (26-199)||(32688464-32688637)
chr7 (29-197)||(18855902-18856070)
chr7 (54-197)||(43124400-43124543)
chr7 (26-199)||(33808332-33808505)
chr7 (26-199)||(18086298-18086471)
chr7 (20-157)||(32680598-32680735)
chr7 (38-157)||(42731440-42731559)
chr7 (38-154)||(17102041-17102157)
chr7 (38-154)||(32298996-32299112)
chr7 (38-129)||(10935815-10935906)
chr7 (38-157)||(28469296-28469415)
chr7 (108-206)||(4226216-4226314)
chr7 (26-195)||(32687406-32687575)
chr7 (38-129)||(6253492-6253583)
chr7 (26-152)||(13044681-13044807)
chr7 (38-152)||(22871570-22871684)
chr7 (20-154)||(32680855-32680989)
chr7 (106-199)||(12228474-12228567)
chr7 (38-154)||(19204510-19204626)
chr7 (38-154)||(27991760-27991876)
chr7 (13-157)||(30948156-30948300)
chr7 (26-148)||(13050078-13050200)
chr7 (38-157)||(17102277-17102396)
chr7 (38-157)||(27396883-27397002)
chr7 (38-157)||(27991996-27992115)
chr7 (108-207)||(45914615-45914714)
chr7 (56-206)||(13384541-13384691)
chr7 (39-129)||(23181310-23181400)
chr7 (38-156)||(45010893-45011011)
chr7 (71-128)||(2640495-2640552)
chr7 (106-199)||(5455916-5456009)
chr7 (24-157)||(34928657-34928790)
chr7 (38-159)||(42362471-42362592)
chr7 (38-154)||(6571034-6571150)
chr7 (42-157)||(2640203-2640318)
chr7 (38-157)||(10936082-10936201)
chr7 (38-157)||(39686555-39686674)
chr7 (38-157)||(40379790-40379909)
chr7 (67-157)||(45010648-45010738)
chr7 (38-123)||(16803967-16804052)
chr7 (73-153)||(3914194-3914274)
chr7 (16-128)||(42019914-42020026)
chr7 (38-157)||(5457195-5457314)
chr7 (38-157)||(6253728-6253847)
chr7 (38-157)||(17885649-17885768)
chr7 (26-157)||(48788812-48788943)
chr7 (108-206)||(12644044-12644142)
chr7 (38-152)||(24389078-24389192)
chr7 (24-154)||(30948420-30948550)
chr7 (71-125)||(48789123-48789177)
chr7 (38-151)||(28469031-28469144)
chr7 (108-157)||(42731707-42731756)
chr7 (141-197)||(22661481-22661537)
chr7 (141-197)||(27480111-27480167)
chr7 (22-93)||(10600031-10600102)
chr7 (38-157)||(13386035-13386154)
chr7 (38-157)||(17886778-17886897)
chr7 (38-153)||(24388840-24388955)
chr7 (71-153)||(6571240-6571322)
chr7 (24-154)||(34928910-34929040)
chr7 (24-154)||(39686794-39686924)
chr7 (140-206)||(47558153-47558219)
chr7 (108-157)||(22871399-22871448)
chr7 (141-197)||(27480667-27480723)
chr7 (17-129)||(37656852-37656964)
chr7 (108-156)||(37657139-37657187)
chr7 (140-199)||(12643223-12643282)
chr7 (59-157)||(3914426-3914524)
chr7 (55-153)||(27396667-27396765)
chr7 (55-157)||(32053431-32053533)
chr7 (140-196)||(4227093-4227149)
chr7 (88-195)||(29144232-29144339)
chr7 (138-206)||(47945469-47945537)
chr7 (138-206)||(47950899-47950967)
chr7 (42-157)||(19204746-19204861)
chr7 (110-153)||(32298863-32298906)
chr7 (38-157)||(42019618-42019737)
chr7 (26-152)||(22828111-22828237)
chr7 (108-153)||(32053234-32053279)
chr7 (55-129)||(20426646-20426720)
chr7 (106-158)||(12229359-12229411)
chr7 (4-48)||(41899224-41899268)
chr7 (108-151)||(22827085-22827128)
chr7 (38-129)||(40380000-40380091)
[»] chr1 (121 HSPs)
chr1 (20-250)||(40714447-40714677)
chr1 (15-243)||(49955345-49955573)
chr1 (20-250)||(8898520-8898750)
chr1 (20-250)||(45750035-45750265)
chr1 (20-250)||(31058250-31058480)
chr1 (20-250)||(28324808-28325037)
chr1 (20-202)||(49955588-49955770)
chr1 (18-202)||(35040855-35041039)
chr1 (20-202)||(17188957-17189139)
chr1 (20-202)||(40714685-40714866)
chr1 (17-250)||(35038455-35038688)
chr1 (17-202)||(7371290-7371475)
chr1 (20-201)||(20760747-20760928)
chr1 (20-202)||(45749845-45750027)
chr1 (20-201)||(12905901-12906082)
chr1 (20-181)||(31050953-31051114)
chr1 (20-202)||(8898758-8898940)
chr1 (20-194)||(37929421-37929595)
chr1 (20-194)||(30326499-30326673)
chr1 (20-202)||(28325045-28325226)
chr1 (12-157)||(34464444-34464589)
chr1 (38-157)||(7820975-7821094)
chr1 (20-121)||(17189173-17189274)
chr1 (20-157)||(24905170-24905307)
chr1 (20-157)||(28011625-28011762)
chr1 (26-206)||(32132313-32132493)
chr1 (38-157)||(6367583-6367702)
chr1 (39-157)||(40210658-40210776)
chr1 (26-199)||(5734019-5734191)
chr1 (38-157)||(13914355-13914474)
chr1 (38-152)||(23209620-23209734)
chr1 (36-154)||(26024442-26024560)
chr1 (20-125)||(44523456-44523561)
chr1 (38-157)||(13914089-13914208)
chr1 (38-153)||(24009833-24009948)
chr1 (38-157)||(34464737-34464856)
chr1 (39-157)||(4960562-4960680)
chr1 (38-152)||(19515840-19515954)
chr1 (20-134)||(32558416-32558530)
chr1 (38-128)||(36694565-36694655)
chr1 (38-128)||(36710666-36710756)
chr1 (38-155)||(42248494-42248611)
chr1 (38-154)||(25647905-25648021)
chr1 (38-157)||(6367850-6367969)
chr1 (38-129)||(14878992-14879083)
chr1 (38-157)||(17662138-17662257)
chr1 (38-157)||(26024680-26024799)
chr1 (38-157)||(30711348-30711467)
chr1 (26-129)||(41098742-41098845)
chr1 (55-128)||(46163068-46163141)
chr1 (17-157)||(31514318-31514458)
chr1 (42-157)||(183246-183361)
chr1 (55-154)||(183482-183581)
chr1 (66-129)||(1103510-1103573)
chr1 (38-157)||(30711615-30711734)
chr1 (38-157)||(37578480-37578599)
chr1 (38-129)||(40772528-40772619)
chr1 (38-157)||(48779407-48779526)
chr1 (38-157)||(49723014-49723133)
chr1 (40-198)||(46899084-46899242)
chr1 (40-198)||(46899847-46900005)
chr1 (24-157)||(33442601-33442734)
chr1 (24-157)||(52134325-52134458)
chr1 (55-151)||(19017923-19018019)
chr1 (11-155)||(24009569-24009713)
chr1 (20-80)||(25885356-25885416)
chr1 (10-154)||(31514577-31514721)
chr1 (38-154)||(47999383-47999499)
chr1 (38-153)||(32917281-32917396)
chr1 (38-149)||(35473652-35473763)
chr1 (11-150)||(37578186-37578325)
chr1 (55-157)||(1103749-1103851)
chr1 (24-154)||(33442854-33442984)
chr1 (71-129)||(43758876-43758934)
chr1 (108-157)||(1841747-1841796)
chr1 (108-157)||(14879259-14879308)
chr1 (17-154)||(40210370-40210507)
chr1 (17-157)||(4716468-4716608)
chr1 (38-150)||(35152364-35152476)
chr1 (141-197)||(46282195-46282251)
chr1 (141-197)||(49093165-49093221)
chr1 (141-197)||(49093733-49093789)
chr1 (38-157)||(17661873-17661990)
chr1 (26-129)||(17691228-17691331)
chr1 (55-154)||(28011401-28011500)
chr1 (26-157)||(32917548-32917679)
chr1 (38-157)||(34849032-34849151)
chr1 (38-157)||(34850353-34850472)
chr1 (38-149)||(43759118-43759229)
chr1 (38-157)||(47999144-47999263)
chr1 (55-157)||(1841497-1841599)
chr1 (55-153)||(4960801-4960899)
chr1 (16-154)||(24905427-24905564)
chr1 (26-151)||(32133218-32133343)
chr1 (24-154)||(52134075-52134205)
chr1 (141-197)||(46282713-46282769)
chr1 (141-197)||(50062327-50062383)
chr1 (140-199)||(13295258-13295317)
chr1 (38-129)||(17692501-17692592)
chr1 (38-157)||(23209383-23209501)
chr1 (38-149)||(36694303-36694414)
chr1 (38-149)||(36710404-36710515)
chr1 (55-205)||(5734951-5735101)
chr1 (17-154)||(4716728-4716864)
chr1 (108-157)||(7821242-7821291)
chr1 (108-157)||(19017720-19017769)
chr1 (108-149)||(35152639-35152680)
chr1 (20-84)||(7371528-7371592)
chr1 (141-197)||(50062868-50062924)
chr1 (193-243)||(30326696-30326746)
chr1 (55-149)||(41099029-41099123)
chr1 (55-157)||(19322930-19323032)
chr1 (55-157)||(19323180-19323282)
chr1 (108-150)||(40772767-40772809)
chr1 (108-153)||(7231541-7231586)
chr1 (52-157)||(21444629-21444734)
chr1 (58-157)||(42248759-42248858)
chr1 (71-153)||(10303977-10304059)
chr1 (39-157)||(13300192-13300310)
chr1 (11-157)||(31197059-31197200)
chr1 (26-119)||(44522156-44522249)
[»] chr4 (148 HSPs)
chr4 (10-250)||(27068903-27069143)
chr4 (15-250)||(10408082-10408317)
chr4 (20-250)||(27891587-27891817)
chr4 (11-250)||(52573222-52573461)
chr4 (20-230)||(54858563-54858773)
chr4 (16-250)||(45463266-45463500)
chr4 (20-250)||(50504018-50504248)
chr4 (20-250)||(39700912-39701142)
chr4 (19-250)||(39666969-39667200)
chr4 (20-202)||(54858801-54858983)
chr4 (20-202)||(3032585-3032767)
chr4 (20-202)||(27069151-27069333)
chr4 (20-202)||(45463076-45463258)
chr4 (28-250)||(22718132-22718354)
chr4 (28-250)||(22986862-22987084)
chr4 (20-202)||(50503828-50504010)
chr4 (85-250)||(51859475-51859640)
chr4 (20-199)||(10407892-10408071)
chr4 (20-202)||(52573469-52573651)
chr4 (17-202)||(11523949-11524134)
chr4 (17-202)||(39701150-39701335)
chr4 (20-191)||(51859658-51859829)
chr4 (60-250)||(9731405-9731595)
chr4 (15-194)||(5818024-5818203)
chr4 (17-202)||(22717939-22718124)
chr4 (20-202)||(22987092-22987274)
chr4 (20-202)||(39666773-39666961)
chr4 (20-141)||(27149298-27149418)
chr4 (28-166)||(22923149-22923287)
chr4 (28-166)||(22927802-22927940)
chr4 (28-166)||(22984081-22984219)
chr4 (28-166)||(22997669-22997807)
chr4 (40-206)||(32063575-32063741)
chr4 (20-198)||(50751745-50751922)
chr4 (20-157)||(16605605-16605742)
chr4 (40-197)||(55867362-55867519)
chr4 (20-157)||(9400522-9400659)
chr4 (17-165)||(50750887-50751035)
chr4 (14-157)||(4982723-4982866)
chr4 (26-206)||(30641529-30641706)
chr4 (26-206)||(40316902-40317082)
chr4 (26-206)||(40326976-40327156)
chr4 (38-157)||(14801757-14801876)
chr4 (38-157)||(34765668-34765787)
chr4 (38-128)||(37248257-37248347)
chr4 (38-154)||(5368968-5369084)
chr4 (38-154)||(23613330-23613446)
chr4 (38-154)||(24711132-24711248)
chr4 (38-157)||(33247295-33247413)
chr4 (38-153)||(44967330-44967445)
chr4 (19-157)||(9144768-9144906)
chr4 (24-157)||(38012427-38012560)
chr4 (26-197)||(11447977-11448148)
chr4 (38-154)||(13058058-13058174)
chr4 (42-154)||(18831374-18831486)
chr4 (39-127)||(35508558-35508646)
chr4 (38-154)||(50418928-50419044)
chr4 (38-129)||(7451855-7451946)
chr4 (38-157)||(50418689-50418808)
chr4 (20-154)||(4982986-4983120)
chr4 (55-153)||(14802027-14802125)
chr4 (20-154)||(27934535-27934669)
chr4 (39-157)||(52909275-52909393)
chr4 (24-157)||(34837081-34837214)
chr4 (24-157)||(42738038-42738171)
chr4 (26-158)||(30642433-30642565)
chr4 (38-158)||(39539205-39539325)
chr4 (38-154)||(49879467-49879583)
chr4 (38-157)||(7452091-7452210)
chr4 (38-157)||(13058270-13058389)
chr4 (38-157)||(15507961-15508079)
chr4 (140-199)||(23455077-23455136)
chr4 (38-157)||(35028286-35028405)
chr4 (55-154)||(36009104-36009203)
chr4 (38-157)||(46661202-46661321)
chr4 (38-157)||(49879228-49879347)
chr4 (38-149)||(51692815-51692926)
chr4 (20-154)||(9400779-9400913)
chr4 (55-129)||(16005876-16005950)
chr4 (44-199)||(39538110-39538262)
chr4 (42-198)||(147344-147500)
chr4 (160-244)||(11524148-11524232)
chr4 (41-157)||(24411382-24411498)
chr4 (17-157)||(35027998-35028138)
chr4 (41-157)||(37976441-37976557)
chr4 (38-157)||(24711368-24711487)
chr4 (38-157)||(34765401-34765520)
chr4 (38-157)||(37248493-37248612)
chr4 (38-157)||(43155550-43155669)
chr4 (55-154)||(43155787-43155886)
chr4 (38-157)||(44967090-44967209)
chr4 (24-151)||(51203616-51203743)
chr4 (38-157)||(53701833-53701952)
chr4 (39-153)||(1179092-1179206)
chr4 (17-151)||(6237114-6237248)
chr4 (55-157)||(17356210-17356312)
chr4 (16-154)||(33247533-33247671)
chr4 (24-154)||(42738291-42738421)
chr4 (140-197)||(23455609-23455666)
chr4 (24-153)||(32950403-32950532)
chr4 (141-198)||(52815787-52815844)
chr4 (55-128)||(54087012-54087085)
chr4 (141-197)||(38982516-38982572)
chr4 (141-197)||(52816343-52816399)
chr4 (141-197)||(56556706-56556762)
chr4 (98-157)||(17356006-17356065)
chr4 (38-157)||(18831605-18831724)
chr4 (38-129)||(51692574-51692665)
chr4 (54-157)||(52909541-52909644)
chr4 (38-153)||(53129798-53129913)
chr4 (24-154)||(9145026-9145156)
chr4 (55-157)||(36008882-36008984)
chr4 (26-135)||(11446279-11446388)
chr4 (20-157)||(22567056-22567180)
chr4 (108-157)||(37976244-37976293)
chr4 (108-157)||(54086786-54086835)
chr4 (17-129)||(6236831-6236942)
chr4 (41-157)||(8438305-8438420)
chr4 (141-197)||(56557245-56557301)
chr4 (26-157)||(8439512-8439642)
chr4 (38-157)||(23613566-23613685)
chr4 (108-198)||(148002-148092)
chr4 (192-250)||(3032775-3032833)
chr4 (24-154)||(32950149-32950279)
chr4 (24-154)||(34837334-34837464)
chr4 (108-157)||(53702100-53702149)
chr4 (108-148)||(1178134-1178174)
chr4 (38-154)||(38012191-38012307)
chr4 (55-154)||(22566837-22566936)
chr4 (38-157)||(24349695-24349814)
chr4 (108-150)||(53129597-53129639)
chr4 (108-157)||(16006095-16006143)
chr4 (108-157)||(27934788-27934837)
chr4 (141-194)||(38813678-38813731)
chr4 (141-197)||(38814247-38814303)
chr4 (38-153)||(10780734-10780849)
chr4 (38-129)||(10781800-10781891)
chr4 (38-153)||(10974343-10974458)
chr4 (38-153)||(24350724-24350839)
chr4 (26-157)||(40387476-40387607)
chr4 (55-158)||(54713667-54713770)
chr4 (112-157)||(15507768-15507813)
chr4 (120-157)||(24411646-24411683)
chr4 (26-131)||(32062598-32062703)
chr4 (108-157)||(35508332-35508380)
chr4 (26-157)||(29321193-29321324)
chr4 (26-129)||(41582456-41582559)
chr4 (25-83)||(27934849-27934907)
[»] chr6 (76 HSPs)
chr6 (16-243)||(21836031-21836256)
chr6 (17-250)||(7160804-7161037)
chr6 (20-250)||(22502967-22503197)
chr6 (19-250)||(31407071-31407302)
chr6 (17-250)||(7905436-7905669)
chr6 (17-250)||(12065220-12065453)
chr6 (10-199)||(22502767-22502956)
chr6 (20-244)||(15913747-15913971)
chr6 (11-202)||(21836271-21836462)
chr6 (15-202)||(6517501-6517687)
chr6 (11-202)||(7905237-7905428)
chr6 (17-202)||(15913548-15913733)
chr6 (15-202)||(31406876-31407063)
chr6 (20-202)||(7161045-7161227)
chr6 (20-250)||(10781150-10781391)
chr6 (54-202)||(10781399-10781547)
chr6 (40-199)||(8089466-8089625)
chr6 (20-152)||(32593493-32593625)
chr6 (20-157)||(14196618-14196755)
chr6 (11-149)||(25485947-25486085)
chr6 (38-154)||(30337470-30337586)
chr6 (38-157)||(30337706-30337825)
chr6 (55-157)||(33517572-33517674)
chr6 (38-157)||(21628001-21628120)
chr6 (38-157)||(33517822-33517941)
chr6 (38-157)||(12080657-12080776)
chr6 (38-157)||(17734217-17734336)
chr6 (38-157)||(30726047-30726166)
chr6 (38-157)||(30804149-30804268)
chr6 (55-157)||(11392876-11392978)
chr6 (20-154)||(14196875-14197009)
chr6 (38-154)||(28000645-28000761)
chr6 (26-129)||(30725769-30725871)
chr6 (38-157)||(33647239-33647358)
chr6 (40-198)||(13379729-13379887)
chr6 (55-157)||(21627751-21627853)
chr6 (24-157)||(362877-363010)
chr6 (17-129)||(3059257-3059369)
chr6 (17-157)||(28000385-28000525)
chr6 (38-157)||(3059544-3059663)
chr6 (55-154)||(17734454-17734553)
chr6 (55-198)||(20651048-20651191)
chr6 (26-157)||(28498313-28498444)
chr6 (38-152)||(30803882-30803996)
chr6 (40-157)||(26463202-26463319)
chr6 (14-154)||(363090-363230)
chr6 (141-197)||(14657129-14657185)
chr6 (141-197)||(33400090-33400146)
chr6 (38-157)||(11434823-11434942)
chr6 (38-149)||(12080932-12081043)
chr6 (55-165)||(15115377-15115487)
chr6 (38-144)||(22367446-22367552)
chr6 (140-197)||(4117467-4117524)
chr6 (108-193)||(20651899-20651984)
chr6 (38-129)||(8090243-8090334)
chr6 (20-154)||(25486188-25486320)
chr6 (26-157)||(29810724-29810855)
chr6 (38-152)||(22372950-22373064)
chr6 (71-157)||(33647017-33647103)
chr6 (140-197)||(14656603-14656660)
chr6 (38-122)||(8418359-8418443)
chr6 (26-125)||(141060-141159)
chr6 (26-125)||(149081-149180)
chr6 (108-159)||(11435955-11436006)
chr6 (26-121)||(15116556-15116651)
chr6 (107-173)||(139883-139949)
chr6 (107-173)||(147904-147970)
chr6 (55-153)||(11393096-11393194)
chr6 (42-124)||(12408492-12408574)
chr6 (140-197)||(33401045-33401103)
chr6 (140-197)||(4116922-4116979)
chr6 (141-197)||(1661350-1661406)
chr6 (29-125)||(24210543-24210639)
chr6 (38-129)||(681044-681135)
chr6 (108-159)||(22617975-22618026)
chr6 (148-196)||(3176304-3176352)
[»] scaffold0328 (2 HSPs)
scaffold0328 (20-250)||(11333-11563)
scaffold0328 (17-202)||(11140-11325)
[»] chr3 (115 HSPs)
chr3 (20-250)||(3469203-3469433)
chr3 (20-250)||(40788613-40788843)
chr3 (17-250)||(52032138-52032372)
chr3 (21-230)||(29118751-29118960)
chr3 (20-250)||(11910702-11910932)
chr3 (20-250)||(29685944-29686174)
chr3 (20-228)||(47551496-47551704)
chr3 (20-244)||(32306427-32306651)
chr3 (20-227)||(37778489-37778696)
chr3 (20-199)||(13948783-13948962)
chr3 (20-202)||(3469441-3469623)
chr3 (31-201)||(35643865-35644035)
chr3 (20-198)||(32306669-32306847)
chr3 (20-202)||(52032380-52032562)
chr3 (11-201)||(41421966-41422156)
chr3 (17-202)||(3596109-3596294)
chr3 (20-250)||(10294570-10294793)
chr3 (20-202)||(29118530-29118723)
chr3 (20-202)||(29686182-29686363)
chr3 (20-199)||(40788423-40788602)
chr3 (20-202)||(10294801-10294982)
chr3 (17-202)||(43998145-43998330)
chr3 (54-202)||(10307616-10307764)
chr3 (20-141)||(33506252-33506373)
chr3 (17-157)||(33156282-33156422)
chr3 (11-197)||(42855553-42855739)
chr3 (130-243)||(3596309-3596422)
chr3 (17-199)||(9368547-9368728)
chr3 (12-153)||(10770485-10770626)
chr3 (20-157)||(36314301-36314438)
chr3 (26-197)||(47857493-47857664)
chr3 (20-198)||(4322595-4322772)
chr3 (26-206)||(6956257-6956438)
chr3 (38-154)||(2796200-2796316)
chr3 (38-157)||(51994174-51994293)
chr3 (20-157)||(48322380-48322517)
chr3 (17-165)||(4323482-4323630)
chr3 (26-177)||(47856396-47856547)
chr3 (39-157)||(33689667-33689785)
chr3 (154-250)||(43998338-43998434)
chr3 (38-129)||(9294274-9294365)
chr3 (17-154)||(10770751-10770888)
chr3 (26-206)||(1078546-1078725)
chr3 (38-154)||(19741183-19741299)
chr3 (26-157)||(21185983-21186114)
chr3 (38-157)||(23458000-23458119)
chr3 (38-153)||(23458271-23458386)
chr3 (108-199)||(32716340-32716431)
chr3 (15-154)||(36314558-36314697)
chr3 (20-154)||(48322637-48322771)
chr3 (15-157)||(54466680-54466822)
chr3 (55-128)||(43384321-43384394)
chr3 (31-204)||(43608723-43608896)
chr3 (38-157)||(33689403-33689521)
chr3 (38-153)||(40758402-40758517)
chr3 (42-129)||(42342816-42342903)
chr3 (176-250)||(13948973-13949047)
chr3 (55-157)||(19740961-19741063)
chr3 (40-189)||(41558138-41558287)
chr3 (39-152)||(46474837-46474950)
chr3 (17-157)||(8041873-8042013)
chr3 (38-157)||(40758168-40758284)
chr3 (17-152)||(26463632-26463767)
chr3 (20-91)||(33506181-33506252)
chr3 (38-157)||(36417976-36418095)
chr3 (26-157)||(53757011-53757142)
chr3 (24-154)||(8041623-8041753)
chr3 (71-157)||(46475069-46475155)
chr3 (12-154)||(54466418-54466560)
chr3 (140-197)||(2944036-2944093)
chr3 (108-197)||(32717025-32717114)
chr3 (14-147)||(36417685-36417818)
chr3 (141-197)||(1756674-1756730)
chr3 (141-197)||(2944586-2944642)
chr3 (141-197)||(37249718-37249774)
chr3 (141-197)||(45278668-45278724)
chr3 (141-197)||(45279204-45279260)
chr3 (141-197)||(48189019-48189075)
chr3 (26-129)||(1079537-1079640)
chr3 (142-197)||(11026552-11026607)
chr3 (38-129)||(40033772-40033863)
chr3 (38-129)||(55052564-55052654)
chr3 (13-75)||(13949063-13949125)
chr3 (55-153)||(42343023-42343121)
chr3 (140-205)||(29192905-29192970)
chr3 (141-198)||(43105357-43105414)
chr3 (112-157)||(43384571-43384616)
chr3 (108-157)||(55052370-55052419)
chr3 (141-197)||(1757224-1757280)
chr3 (26-158)||(32431479-32431611)
chr3 (141-197)||(37249323-37249379)
chr3 (141-197)||(48188502-48188558)
chr3 (108-199)||(29192126-29192217)
chr3 (38-153)||(47921487-47921602)
chr3 (39-129)||(53756766-53756856)
chr3 (108-153)||(2796406-2796451)
chr3 (108-157)||(9294049-9294098)
chr3 (89-157)||(26463886-26463954)
chr3 (141-197)||(43105754-43105810)
chr3 (108-152)||(51994042-51994086)
chr3 (38-128)||(40506104-40506195)
chr3 (54-129)||(41988621-41988696)
chr3 (5-119)||(33154865-33154979)
chr3 (140-197)||(11026060-11026117)
chr3 (108-149)||(40033597-40033638)
chr3 (97-149)||(35712111-35712163)
chr3 (155-199)||(35759047-35759091)
chr3 (26-129)||(23276299-23276402)
chr3 (26-129)||(25107222-25107325)
chr3 (26-128)||(41558017-41558119)
chr3 (30-83)||(3596434-3596486)
chr3 (201-250)||(10307559-10307608)
chr3 (97-205)||(44960257-44960364)
chr3 (41-127)||(21783813-21783899)
chr3 (26-83)||(43607789-43607846)
[»] chr2 (86 HSPs)
chr2 (20-250)||(8710661-8710891)
chr2 (17-250)||(15604532-15604765)
chr2 (20-250)||(11830367-11830597)
chr2 (20-199)||(15604342-15604521)
chr2 (20-253)||(41587238-41587470)
chr2 (9-181)||(28226006-28226178)
chr2 (20-202)||(41588299-41588481)
chr2 (17-202)||(8342187-8342372)
chr2 (17-244)||(8342386-8342605)
chr2 (26-197)||(39936495-39936665)
chr2 (16-199)||(6588682-6588865)
chr2 (26-206)||(202595-202775)
chr2 (17-129)||(6573047-6573158)
chr2 (38-157)||(15848109-15848228)
chr2 (38-157)||(44714049-44714168)
chr2 (36-154)||(16099074-16099192)
chr2 (26-128)||(22051310-22051412)
chr2 (24-157)||(1695747-1695880)
chr2 (20-121)||(6573546-6573647)
chr2 (38-129)||(2318180-2318270)
chr2 (38-152)||(11163316-11163430)
chr2 (24-157)||(13995680-13995813)
chr2 (38-157)||(13692508-13692627)
chr2 (108-199)||(25623379-25623470)
chr2 (38-157)||(36382182-36382301)
chr2 (108-206)||(25624344-25624442)
chr2 (39-157)||(36479740-36479858)
chr2 (55-157)||(39423553-39423655)
chr2 (20-129)||(25892397-25892506)
chr2 (24-157)||(33062057-33062190)
chr2 (72-157)||(37895635-37895720)
chr2 (38-178)||(3555271-3555411)
chr2 (26-130)||(6589674-6589778)
chr2 (38-154)||(6657899-6658015)
chr2 (38-154)||(39498331-39498447)
chr2 (17-153)||(41248559-41248695)
chr2 (38-157)||(10712744-10712863)
chr2 (38-157)||(16099312-16099431)
chr2 (38-157)||(34448083-34448202)
chr2 (38-149)||(36755384-36755495)
chr2 (38-157)||(37895368-37895487)
chr2 (38-152)||(45556133-45556247)
chr2 (38-159)||(30729642-30729763)
chr2 (38-157)||(6658135-6658254)
chr2 (38-157)||(10713011-10713130)
chr2 (20-154)||(14900743-14900875)
chr2 (38-157)||(15848376-15848495)
chr2 (40-199)||(25230125-25230284)
chr2 (38-157)||(36480006-36480125)
chr2 (38-157)||(39498567-39498686)
chr2 (55-157)||(11163092-11163194)
chr2 (40-158)||(25231135-25231253)
chr2 (24-154)||(33739710-33739840)
chr2 (55-153)||(44713833-44713931)
chr2 (140-197)||(29958467-29958524)
chr2 (24-153)||(33739964-33740093)
chr2 (141-197)||(20983181-20983237)
chr2 (141-197)||(21103205-21103261)
chr2 (54-157)||(3653368-3653470)
chr2 (38-157)||(39423803-39423922)
chr2 (24-154)||(13995933-13996063)
chr2 (111-157)||(22051088-22051134)
chr2 (24-154)||(33062310-33062440)
chr2 (48-157)||(6577565-6577674)
chr2 (140-197)||(29957940-29957997)
chr2 (97-197)||(199088-199188)
chr2 (141-197)||(20982648-20982704)
chr2 (38-154)||(41248819-41248935)
chr2 (38-153)||(34447834-34447948)
chr2 (38-153)||(36382419-36382534)
chr2 (26-152)||(28228679-28228805)
chr2 (55-157)||(36755131-36755233)
chr2 (154-199)||(8710605-8710650)
chr2 (26-127)||(28230057-28230158)
chr2 (26-138)||(39935465-39935576)
chr2 (24-154)||(1696000-1696130)
chr2 (73-127)||(25893536-25893590)
chr2 (38-152)||(45556340-45556454)
chr2 (108-153)||(9076359-9076404)
chr2 (38-158)||(3556296-3556416)
chr2 (20-93)||(14900499-14900572)
chr2 (108-157)||(14900574-14900623)
chr2 (40-157)||(44045290-44045407)
chr2 (111-158)||(2318445-2318492)
chr2 (54-121)||(43742000-43742067)
chr2 (37-158)||(6307003-6307126)
[»] chr8 (112 HSPs)
chr8 (20-250)||(15230124-15230354)
chr8 (20-250)||(25124756-25124986)
chr8 (20-250)||(44664511-44664741)
chr8 (12-250)||(6471685-6471923)
chr8 (17-230)||(42945327-42945540)
chr8 (17-201)||(10445577-10445761)
chr8 (20-244)||(41353773-41353996)
chr8 (20-199)||(35634343-35634522)
chr8 (17-202)||(25124563-25124748)
chr8 (11-199)||(15229925-15230113)
chr8 (17-202)||(37542224-37542409)
chr8 (11-202)||(44664749-44664940)
chr8 (60-250)||(21432886-21433076)
chr8 (20-189)||(8997943-8998112)
chr8 (18-250)||(37542417-37542650)
chr8 (20-202)||(21432696-21432878)
chr8 (20-195)||(7983431-7983606)
chr8 (54-204)||(39474583-39474732)
chr8 (61-202)||(42945158-42945299)
chr8 (18-202)||(41353575-41353759)
chr8 (20-167)||(234016-234163)
chr8 (20-167)||(710427-710574)
chr8 (20-167)||(747639-747786)
chr8 (20-167)||(871534-871681)
chr8 (26-206)||(2535789-2535969)
chr8 (55-202)||(6471931-6472078)
chr8 (20-202)||(27500092-27500273)
chr8 (108-250)||(27500281-27500423)
chr8 (49-202)||(38003487-38003640)
chr8 (55-199)||(34177216-34177360)
chr8 (20-157)||(11674951-11675088)
chr8 (38-157)||(40318252-40318371)
chr8 (38-154)||(8316879-8316995)
chr8 (17-157)||(36325491-36325631)
chr8 (38-157)||(16388814-16388933)
chr8 (15-107)||(8997854-8997946)
chr8 (20-148)||(23505055-23505183)
chr8 (38-154)||(23663805-23663921)
chr8 (38-157)||(39071697-39071816)
chr8 (55-197)||(2534733-2534875)
chr8 (38-159)||(34061614-34061735)
chr8 (20-148)||(23507722-23507850)
chr8 (38-154)||(23698535-23698651)
chr8 (98-197)||(34176522-34176621)
chr8 (55-157)||(36928514-36928616)
chr8 (97-206)||(7294181-7294290)
chr8 (17-102)||(38003747-38003832)
chr8 (17-157)||(44406857-44406997)
chr8 (38-129)||(4994973-4995063)
chr8 (38-157)||(13186081-13186200)
chr8 (55-154)||(22915649-22915748)
chr8 (38-157)||(31608801-31608920)
chr8 (55-153)||(23698347-23698445)
chr8 (38-151)||(12273147-12273260)
chr8 (17-157)||(3041456-3041596)
chr8 (17-157)||(38845299-38845439)
chr8 (17-153)||(38862855-38862991)
chr8 (55-154)||(1425313-1425411)
chr8 (169-244)||(7983627-7983702)
chr8 (38-153)||(8316674-8316789)
chr8 (20-154)||(11674698-11674831)
chr8 (148-250)||(38003648-38003749)
chr8 (38-157)||(1425074-1425193)
chr8 (11-154)||(3041716-3041859)
chr8 (38-157)||(4405948-4406067)
chr8 (38-157)||(12198971-12199090)
chr8 (38-153)||(12272939-12273054)
chr8 (38-157)||(12443399-12443518)
chr8 (38-157)||(13186347-13186466)
chr8 (38-157)||(23663566-23663685)
chr8 (11-154)||(38845559-38845702)
chr8 (38-157)||(40317985-40318104)
chr8 (20-154)||(36325237-36325371)
chr8 (55-157)||(36928764-36928866)
chr8 (71-153)||(38862672-38862754)
chr8 (55-125)||(38955741-38955811)
chr8 (24-153)||(2266753-2266882)
chr8 (140-197)||(11761963-11762020)
chr8 (36-157)||(22915408-22915529)
chr8 (140-197)||(34213887-34213944)
chr8 (40-157)||(35756606-35756722)
chr8 (24-157)||(40775657-40775790)
chr8 (141-197)||(34665894-34665950)
chr8 (73-153)||(36186359-36186439)
chr8 (38-157)||(38955960-38956079)
chr8 (55-153)||(39071934-39072031)
chr8 (12-157)||(8746319-8746464)
chr8 (108-157)||(35756870-35756919)
chr8 (141-197)||(34214448-34214504)
chr8 (141-197)||(34666461-34666517)
chr8 (38-154)||(40775910-40776026)
chr8 (14-154)||(44407117-44407257)
chr8 (38-157)||(34685546-34685664)
chr8 (38-129)||(35449894-35449985)
chr8 (24-154)||(2266499-2266629)
chr8 (39-157)||(9337048-9337166)
chr8 (97-157)||(31608593-31608653)
chr8 (38-121)||(42803542-42803625)
chr8 (39-156)||(4994679-4994796)
chr8 (26-103)||(10749850-10749927)
chr8 (20-63)||(6472395-6472438)
chr8 (55-158)||(7295214-7295317)
chr8 (38-148)||(34060510-34060620)
chr8 (108-157)||(4405753-4405802)
chr8 (108-157)||(8747552-8747601)
chr8 (108-149)||(36186192-36186233)
chr8 (26-126)||(11762995-11763095)
chr8 (38-129)||(20385589-20385680)
chr8 (38-129)||(20386746-20386837)
chr8 (55-146)||(43181451-43181542)
chr8 (13-131)||(30459367-30459485)
chr8 (108-153)||(16388652-16388697)
[»] scaffold0006 (2 HSPs)
scaffold0006 (16-250)||(221790-222022)
scaffold0006 (11-202)||(222030-222221)
[»] chr5 (117 HSPs)
chr5 (20-250)||(17544241-17544471)
chr5 (20-250)||(20153111-20153338)
chr5 (20-250)||(33871532-33871761)
chr5 (14-202)||(33871336-33871524)
chr5 (14-202)||(20152778-20152965)
chr5 (20-186)||(8875452-8875618)
chr5 (39-202)||(22298564-22298727)
chr5 (46-202)||(17544077-17544233)
chr5 (15-196)||(21287904-21288085)
chr5 (67-179)||(21287793-21287905)
chr5 (38-206)||(11741756-11741924)
chr5 (38-157)||(5993910-5994029)
chr5 (17-157)||(41930773-41930913)
chr5 (14-157)||(6757862-6758005)
chr5 (42-153)||(16083002-16083113)
chr5 (38-157)||(24547413-24547532)
chr5 (11-153)||(35512142-35512284)
chr5 (39-153)||(38442090-38442204)
chr5 (20-118)||(3656743-3656841)
chr5 (38-154)||(11761770-11761886)
chr5 (38-157)||(32242530-32242648)
chr5 (38-153)||(38475291-38475406)
chr5 (38-129)||(39453321-39453412)
chr5 (38-157)||(39453587-39453706)
chr5 (20-154)||(6758125-6758259)
chr5 (39-124)||(13362549-13362634)
chr5 (37-129)||(186439-186531)
chr5 (17-157)||(1506224-1506364)
chr5 (38-154)||(3529133-3529249)
chr5 (130-202)||(20153031-20153103)
chr5 (38-154)||(27587169-27587285)
chr5 (13-157)||(31482398-31482542)
chr5 (17-157)||(43159102-43159242)
chr5 (38-153)||(5024310-5024425)
chr5 (38-157)||(6150708-6150827)
chr5 (38-157)||(11762005-11762124)
chr5 (38-129)||(13962885-13962976)
chr5 (38-157)||(27587403-27587522)
chr5 (38-157)||(32242263-32242382)
chr5 (39-157)||(28269444-28269562)
chr5 (38-157)||(3528894-3529013)
chr5 (38-153)||(14194444-14194559)
chr5 (38-157)||(19892596-19892715)
chr5 (38-157)||(20814423-20814542)
chr5 (38-157)||(20840554-20840673)
chr5 (54-157)||(38475070-38475173)
chr5 (39-157)||(5255040-5255157)
chr5 (39-157)||(6301831-6301949)
chr5 (11-157)||(17202687-17202833)
chr5 (108-205)||(22870374-22870471)
chr5 (26-136)||(24141461-24141571)
chr5 (38-152)||(28771131-28771245)
chr5 (20-154)||(41930519-41930653)
chr5 (22-147)||(30005158-30005283)
chr5 (38-129)||(18247107-18247196)
chr5 (41-129)||(35920500-35920588)
chr5 (38-157)||(8322692-8322811)
chr5 (38-157)||(16156876-16156995)
chr5 (38-129)||(16157171-16157262)
chr5 (42-129)||(17202424-17202511)
chr5 (38-157)||(19517895-19518014)
chr5 (140-199)||(22869728-22869787)
chr5 (55-157)||(6301581-6301683)
chr5 (55-157)||(21265181-21265283)
chr5 (71-129)||(29646678-29646736)
chr5 (24-153)||(297021-297150)
chr5 (17-154)||(297274-297411)
chr5 (23-92)||(8875618-8875687)
chr5 (72-157)||(11047492-11047577)
chr5 (108-157)||(11047725-11047774)
chr5 (38-129)||(18670223-18670311)
chr5 (38-155)||(19892329-19892446)
chr5 (38-150)||(14194718-14194829)
chr5 (141-197)||(20072245-20072301)
chr5 (141-197)||(20072789-20072845)
chr5 (24-152)||(31482664-31482792)
chr5 (141-197)||(36477296-36477352)
chr5 (141-197)||(39181716-39181772)
chr5 (38-157)||(5024040-5024159)
chr5 (38-157)||(5994177-5994296)
chr5 (38-129)||(6150475-6150566)
chr5 (11-158)||(11740681-11740828)
chr5 (38-157)||(28770890-28771009)
chr5 (38-157)||(29646383-29646502)
chr5 (38-153)||(35512406-35512521)
chr5 (55-146)||(35920266-35920357)
chr5 (24-154)||(1505974-1506104)
chr5 (188-250)||(22298735-22298797)
chr5 (108-157)||(13362318-13362367)
chr5 (108-157)||(20814226-20814275)
chr5 (141-197)||(16533545-16533601)
chr5 (141-197)||(36476889-36476945)
chr5 (141-197)||(39181181-39181237)
chr5 (38-157)||(186707-186826)
chr5 (89-152)||(28269681-28269744)
chr5 (38-149)||(38442363-38442474)
chr5 (140-197)||(20857055-20857113)
chr5 (55-128)||(21265458-21265532)
chr5 (108-153)||(13963121-13963166)
chr5 (108-157)||(18670453-18670502)
chr5 (141-197)||(16533017-16533073)
chr5 (86-129)||(8322473-8322516)
chr5 (26-153)||(40150106-40150233)
chr5 (140-197)||(20857466-20857524)
chr5 (108-150)||(27937144-27937186)
chr5 (108-157)||(16083231-16083280)
chr5 (108-153)||(24547281-24547326)
chr5 (12-123)||(5835748-5835859)
chr5 (140-198)||(21257408-21257466)
chr5 (108-149)||(10684234-10684275)
chr5 (26-119)||(40148907-40149000)
chr5 (26-131)||(42067838-42067943)
chr5 (187-250)||(20152973-20153034)
chr5 (107-153)||(15645004-15645050)
chr5 (55-124)||(5835661-5835730)
chr5 (121-158)||(18247370-18247407)
chr5 (33-129)||(5256328-5256423)
[»] scaffold0388 (2 HSPs)
scaffold0388 (17-250)||(12432-12665)
scaffold0388 (14-202)||(12243-12424)
[»] scaffold0599 (1 HSPs)
scaffold0599 (20-250)||(2396-2626)
[»] scaffold0042 (1 HSPs)
scaffold0042 (20-250)||(11973-12203)
[»] scaffold0771 (3 HSPs)
scaffold0771 (20-199)||(923-1102)
scaffold0771 (176-250)||(1113-1187)
scaffold0771 (13-75)||(1203-1265)
[»] scaffold0128 (1 HSPs)
scaffold0128 (10-195)||(19850-20035)
[»] scaffold0775 (2 HSPs)
scaffold0775 (26-196)||(6227-6397)
scaffold0775 (42-197)||(4987-5142)
[»] scaffold0031 (2 HSPs)
scaffold0031 (38-157)||(68986-69105)
scaffold0031 (13-155)||(69255-69397)
[»] scaffold0005 (2 HSPs)
scaffold0005 (38-157)||(37851-37970)
scaffold0005 (55-153)||(37602-37700)
[»] scaffold0007 (2 HSPs)
scaffold0007 (38-154)||(1790-1906)
scaffold0007 (38-154)||(2032-2148)
[»] scaffold0020 (2 HSPs)
scaffold0020 (38-154)||(139693-139809)
scaffold0020 (38-157)||(139929-140048)
[»] scaffold0024 (2 HSPs)
scaffold0024 (17-157)||(141594-141734)
scaffold0024 (24-154)||(141854-141984)
[»] scaffold0008 (2 HSPs)
scaffold0008 (26-153)||(239843-239970)
scaffold0008 (106-159)||(238344-238397)
[»] scaffold0205 (2 HSPs)
scaffold0205 (20-124)||(21012-21116)
scaffold0205 (15-154)||(21229-21368)
[»] scaffold0075 (2 HSPs)
scaffold0075 (39-157)||(14451-14569)
scaffold0075 (38-98)||(14737-14797)
[»] scaffold0559 (2 HSPs)
scaffold0559 (38-154)||(1254-1370)
scaffold0559 (58-157)||(1490-1590)
[»] scaffold0707 (1 HSPs)
scaffold0707 (38-137)||(6387-6486)
[»] scaffold0295 (2 HSPs)
scaffold0295 (108-153)||(2435-2480)
scaffold0295 (89-157)||(2215-2283)


Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 108)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 19 - 250
Target Start/End: Original strand, 25628480 - 25628711
Alignment:
Q  19 tttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcattta 118  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  25628480 tttaatgatgtgtttcgtgcttgcaattaggcgtcatttaaaaattagtcattgtaatcgataatcctggcaatttacccttgcattgtttaatcattta 25628579  T
Q  119 aaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatg 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  25628580 aaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatccattcgtgaaatg 25628679  T
Q  219 acatttttacccatgacttcatcttcatctca 250  Q
    |||||||||||| |  |||||||||| |||||    
T  25628680 acatttttacccctatcttcatcttcttctca 25628711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 42618337 - 42618104
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||    
T  42618337 ggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 42618238  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaa 216  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| | |||    
T  42618237 taaaatttcgtcctttgaccaacttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaatatcctcgtcatccattcatgaaa 42618138  T
Q  217 tgacatttttacccatgacttcatcttcatctca 250  Q
    |||||||||||||| || |||||||||| |||||    
T  42618137 tgacatttttacccctgtcttcatcttcttctca 42618104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 13 - 250
Target Start/End: Complemental strand, 10600379 - 10600142
Alignment:
Q  13 ttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaat 112  Q
    ||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  10600379 ttttggtttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaat 10600280  T
Q  113 catttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgt 212  Q
    |||| ||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  10600279 cattcaaaattttgtcctttgaccaacttaatcactgtcatgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatccatttgt 10600180  T
Q  213 aaaatgacatttttacccatgacttcatcttcatctca 250  Q
     ||||||||||||||||| || |||||||||| |||||    
T  10600179 gaaatgacatttttacccctgtcttcatcttcttctca 10600142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 22081558 - 22081792
Alignment:
Q  15 ttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatca 114  Q
    |||| ||||||||||||||||| |||||||||| |||| |||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||    
T  22081558 ttggcttaatgatgtgtttcgtccttgcaattatgcgtcatttaaaaattagtcctc-taatcgctaatgctggcaatttacccttgcattgtttaatca 22081656  T
Q  115 tttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaa 214  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| || |||||||||||||||||||||||||||||| |    
T  22081657 tttaaaatttcgtcctttgatcaacttaatcactgccaagtcatcaaattagcgaaatggcatgagaatggacaaaaataccctcgtcatccattcgtga 22081756  T
Q  215 aatgacatttttacccatgacttcatcttcatctca 250  Q
    |||||||||||||||| || |||||||||| |||||    
T  22081757 aatgacatttttacccctgtcttcatcttcttctca 22081792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 23058852 - 23058622
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||||| |||||||||||| |||| ||||||||||||||| |||||||||||||||||||    
T  23058852 ttaatgatgtgtttcgtccttgcaattcggcgtcatttaaaaattaatccttgtaatcgttaatcctggcaatttaccctcgcattgtttaatcatttaa 23058753  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  23058752 aatttcgtcatttgaccaacttaattactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaatacccttgtcatccattcgcaaaatga 23058653  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    ||||||||||| || |||||||||| |||||    
T  23058652 catttttacccctgtcttcatcttcttctca 23058622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 32068519 - 32068289
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| |||||||||||| || |||||||||||| ||| ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  32068519 ttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaattaatccctgtaatcgctaatcctgccaatttacccttgcattgtttaatcatttaa 32068420  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||| | ||||||    
T  32068419 aatttcgtcatttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaagaccctcgtcatccattcatgaaatga 32068320  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    ||||||||||| || |||||||||| |||||    
T  32068319 catttttacccctgtcttcatcttcttctca 32068289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 32934771 - 32934541
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||| ||| |||||||| ||| ||||||||||||||||||    
T  32934771 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttactcttacattgtttaatcatttaa 32934672  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    ||||||||| |||||||||||||||||||| |||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||    
T  32934671 aatttcgtcatttgaccaacttaatcactgtcacgacatcaaattagcaaaatgacatgggaatggacaaaaataccctcgtcatccattcgtgaaatga 32934572  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    ||||||||||| |  |||||||||| |||||    
T  32934571 catttttacccctatcttcatcttcttctca 32934541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 20 - 250
Target Start/End: Original strand, 43266269 - 43266499
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||| |||| ||| |||||||||||||||||||||||||||||||    
T  43266269 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctgacaatttacccttgcattgtttaatcatttaa 43266368  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    |||||| || |||||||||||||||||||| ||||||||||||||| |||||||| |||||| || ||||||||||||||||||||||||||| ||||||    
T  43266369 aatttcatcatttgaccaacttaatcactgtcacgtcatcaaattaacaaaatggtatgggaatgaacaaaaataccctcgtcatccattcgtgaaatga 43266468  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    ||||||||||| || |||||||||| |||||    
T  43266469 catttttacccctgtcttcatcttcttctca 43266499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 25453554 - 25453321
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    ||||||||||||||||||||  ||| ||||| |||| |||||||||||||||| || |||||||||| || |||||||||||||||||||||||||||||    
T  25453554 ggtttaatgatgtgtttcgtctttgtaattaagcgtcatttaaaaattagtccctgaaatcgctaatcctagcaatttacccttgcattgtttaatcatt 25453455  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaa 216  Q
    ||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| || |||    
T  25453454 taacatttcgtcctttgaccagcttaatcaccgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaatatcctcgtcatccatttgtgaaa 25453355  T
Q  217 tgacatttttacccatgacttcatcttcatctca 250  Q
    |||||||||||||| || |||||||||| |||||    
T  25453354 tgacatttttacccctgtcttcatcttcttctca 25453321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 4 - 202
Target Start/End: Original strand, 42617898 - 42618096
Alignment:
Q  4 tatataattttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgca 103  Q
    |||||| |||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||| | ||||||||||| ||| |||||||||||||||    
T  42617898 tatatacttttttggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcctgacaatttacccttgca 42617997  T
Q  104 ttgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42617998 ttgtttaatcatttaaaatttcgtcctttgatcaacttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtc 42618096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 46205735 - 46205502
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||||||||||||||||||||||||||    | ||||||| ||| || | |||||||| |||| ||| ||| ||||||||||||||||||||||||    
T  46205735 ggtttaatgatgtgtttcgttcttgcaattaatgatcatttaaagattggttcctgtaatcgttaatcctgacaaattacccttgcattgtttaatcatt 46205636  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaa 216  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||    
T  46205635 taaaatttcgtcctttgaccaacttaatcactatcacgtcatcaaattaggaaaatggcatgggaatggacaaaaataccctcgtcatccattcgtgaaa 46205536  T
Q  217 tgacatttttacccatgacttcatcttcatctca 250  Q
    |||||||||||||| || |||||||||| |||||    
T  46205535 tgacatttttacccctgtcttcatcttcttctca 46205502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 19 - 202
Target Start/End: Original strand, 32068098 - 32068281
Alignment:
Q  19 tttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcattta 118  Q
    |||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32068098 tttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcattta 32068197  T
Q  119 aaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||  |||||||||||||||||||    
T  32068198 aaatttcgtactttgaccaacttaatcaatgccaagtcatcaaattagcaaaatggcatgggaaaggacaaaaataccctcgtc 32068281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 28890579 - 28890767
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  28890579 ggtttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctagcaatttacccttgcattgtttaatcatt 28890678  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatc 205  Q
    |||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  28890679 taaaatttcgtcttttgactaacttaatcactgtcacgtcatcaaattagcaaaatggcatgaaaatggacaaaaataccctcgtcatc 28890767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 43266689 - 43266507
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43266689 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaattctgacaatttacccttgcattgtttaatcatttaa 43266590  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||||||||||||||||||||||| | | |||||||||||||||||||| |||| || ||||||||||||| ||||||    
T  43266589 aatttcgtcctttgaccaacttaatcactactaagtcatcaaattagcaaaatgacatgagaatggacaaaaatactctcgtc 43266507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 32934348 - 32934531
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||||||||||||| | |||||||||||| || |||||||||||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||    
T  32934348 ggtttaatgatgtgtttcatccttgcaattaggtgtcatttaaaaattagtcgctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 32934447  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcg 200  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  32934448 taaaatttcgtcctttgaccaacttaatcactaccaagtcatcaaattagcaaaatggcataggaatggacaaaaataccctcg 32934531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 25628901 - 25628719
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    |||||||||||| |||| |||||||||| |||| |||||||||||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  25628901 ttaatgatgtgtctcgtccttgcaattatgcgtcatttaaaaattagtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 25628802  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  25628801 aatttcgtcctttgaccaacttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaactaccctcgtc 25628719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 25453131 - 25453307
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| | ||||||||||| ||| ||||||||||||||||| |||||||||||||    
T  25453131 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaatttacccttgcattatttaatcatttaa 25453230  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaatacc 196  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||| ||||||||||||||    
T  25453231 aatttcgtcctttgaccaacttaatcactaccaagtcatcaaattagcaaaaaggcatgggaatggacaaaaatacc 25453307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 27138364 - 27138182
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||| |||| |||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  27138364 ttaatgatgtgtttcgtcctttcaatcaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 27138265  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||| | ||||||||||||||||||| |||| |||||||||||| ||||||  ||||||| ||||||||||||||||||||    
T  27138264 aatttctttctttgaccaacttaatcaccgccaagtcatcaaattaacaaaataacatgggaatggacaaaaataccctcgtc 27138182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 33828397 - 33828219
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||| ||||||| |||||||||||| || |||||||||||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  33828397 ttaatgatgagtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 33828298  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccct 198  Q
    ||||||||| |||||||||||||||||||| ||  |||||||| || ||||||||||||||| ||||||||||||||||    
T  33828297 aatttcgtcatttgaccaacttaatcactgtcaaatcatcaaactaacaaaatggcatgggaatggacaaaaataccct 33828219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 46204421 - 46204599
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||  ||| ||||||||| ||||||| ||| ||||||    
T  46204421 ggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaaacctgacaatttaccattgcattattttatcatt 46204520  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaatac 195  Q
    ||||||||||||| |||||||||||||||||||| | ||||||||||||| |||||||||||||| || ||||||||||    
T  46204521 taaaatttcgtccattgaccaacttaatcactgctaagtcatcaaattagtaaaatggcatgggaatgaacaaaaatac 46204599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 15 - 200
Target Start/End: Complemental strand, 22081987 - 22081803
Alignment:
Q  15 ttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatca 114  Q
    |||| |||||||| |||||||| |||||||||| |||| ||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||||||    
T  22081987 ttggcttaatgatttgtttcgtccttgcaattatgcgtcatttaaaaattagtttctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 22081888  T
Q  115 tttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcg 200  Q
    |||||||||||||| ||||||||||||||||| ||||| |||||||||||||| |||||| |||||| ||||| ||||||||||||    
T  22081887 tttaaaatttcgtcatttgaccaacttaatcattgccaagtcatcaaattagccaaatggtatgggaatggac-aaaataccctcg 22081803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 192
Target Start/End: Original strand, 39274870 - 39275045
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||||||||  ||||||||||||| || | |||||||| ||||||||||||||||||    
T  39274870 ggtttaatgatgtgttttgtccttgcaatttggcgttatttaaaaattagtctctgtaatcgctaatcctagtaatttacctttgcattgtttaatcatt 39274969  T
Q  117 taaaatttcgtcc-tttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaa 192  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||    
T  39274970 taaaatttcgtccttttgaccaacttaatcactgccacgtcatcaaattagc-aaatggcatgagaatggacaaaaa 39275045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 20 - 195
Target Start/End: Original strand, 23058432 - 23058607
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| |||||||||| | || |||||||||||||||| ||||||  ||||| |||||||| |||| |||||||||||||||||||||    
T  23058432 ttaatgatgtgtttcgtccttgcaattaagagtcatttaaaaattagtccctgtaattactaatcctggcaatataccattgcattgtttaatcatttaa 23058531  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaatac 195  Q
    |||||||||||||||||||||||||| |  ||| |||||||||||||||||||| ||||||| |||||||||||||    
T  23058532 aatttcgtcctttgaccaacttaatcgccaccaagtcatcaaattagcaaaatgtcatgggaatggacaaaaatac 23058607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 18087757 - 18087584
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||||||| || |||||||||||| || ||||||||||| |||  ||||||||||||| || ||||  || ||||||| |  |||||||||||||||||     
T  18087757 atgtgtttagtccttgcaattaggggtcatttaaaaattggtcactgtaatcgctaatccttgcaaaatagccttgcaattattaatcatttaaaatttt 18087658  T
Q  126 gtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    |||| || ||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18087657 gtcccttaacccacttaatgactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 18087584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 32688637 - 32688464
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||  |||||||||||| || |||||||| || |||||||||||||||||| ||| ||| || ||||||||    ||||||||||||||||||    
T  32688637 atgtgtttcgcccttgcaattaggggtcatttaaaatttggtccttgtaatcgctaatcctgacaaattgcccttgcaaatattaatcatttaaaatttc 32688538  T
Q  126 gtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    |||| |||||| ||||||| ||||||||||||||||||||||||||| |||||| | | |||||||||||||||    
T  32688537 gtcccttgacccacttaataactgccacgtcatcaaattagcaaaattgcatggaaatagacaaaaataccctc 32688464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 197
Target Start/End: Complemental strand, 18856070 - 18855902
Alignment:
Q  29 tgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 128  Q
    |||||||| | |||||||||| || ||||||||||| |||| |||||||| ||||  |||||| |||||||||||  |||||||||||||||||||||||    
T  18856070 tgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcttggcaaattacccttgcaaagtttaatcatttaaaatttcgtc 18855971  T
Q  129 ctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    | || ||| ||||||| |||| |||||||||||||||||||||| ||||||||  ||||||||||||||    
T  18855970 ccttaacccacttaatgactgacacgtcatcaaattagcaaaatagcatgggaaaggacaaaaataccc 18855902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 43124543 - 43124400
Alignment:
Q  54 atttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    ||||||||||| |||| ||||||||||||| ||  |||  |||||||||||||||||||||||||||||||||||| |   || | ||||||||||||||    
T  43124543 atttaaaaattggtccctgtaatcgctaatccttacaaactacccttgcattgtttaatcatttaaaatttcgtccctattcccagttaatcactgccac 43124444  T
Q  154 gtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||||||||||||||| ||||||| |||||||||||||||    
T  43124443 gtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 43124400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 33808332 - 33808505
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||| |||| |||||| ||||| ||||  |||||||||| |||  |||| |||||||| || |||| |||  |||||||| |||||||||||||||||||    
T  33808332 atgtatttcattcttgaaattacgcgtcgtttaaaaattggtctctgtattcgctaatccttgcaaattagtcttgcattctttaatcatttaaaatttc 33808431  T
Q  126 gtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    |||| |||||| | |||||| ||||| |||||||||||||||||||||| |||||| |||||||||||||||||    
T  33808432 gtccattgacccagttaatcgctgccccgtcatcaaattagcaaaatgggatgggaatggacaaaaataccctc 33808505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 18086298 - 18086471
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||||||| || |||||||||||| ||  |||||||||| |||| ||||| || |||| || |||| ||| ||||||| |  ||||||| ||||||||||    
T  18086298 atgtgtttagtccttgcaattaggagtcgtttaaaaattggtccctgtaaacgataatccttgcaaattagccttgcaattattaatcacttaaaatttc 18086397  T
Q  126 gtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    |||| |||||| | ||||| ||||||| |||||||||||||||||||||||||| | |||||||||||||||||    
T  18086398 gtcccttgacccagttaattactgccatgtcatcaaattagcaaaatggcatggaaatggacaaaaataccctc 18086471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 32680598 - 32680735
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || ||||||||||||||| ||||||||||| || | |||||| |||||| ||| ||||||| ||||||| |  ||||||||||||    
T  32680598 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgttcctgtaattgctaatcctgacaatttagccttgcaattgttaatcatttaa 32680697  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  32680698 aatttggtccttggaccaacttaatcactgccacgtca 32680735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 42731440 - 42731559
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |   ||     
T  42731440 cttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctcccc 42731539  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||| ||||    
T  42731540 acttaatcactgccatgtca 42731559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 17102041 - 17102157
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |   ||     
T  17102041 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctcccc 17102140  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  17102141 acttaatcactgccacg 17102157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 32299112 - 32298996
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |   ||     
T  32299112 cttgcaattaggagtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattgaaaatttcgtccctctcccc 32299013  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  32299012 acttaatcactgccacg 32298996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 10935815 - 10935906
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||||| ||  |||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10935815 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 10935906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 28469415 - 28469296
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |   ||     
T  28469415 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccc 28469316  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||| ||||||||    
T  28469315 acttaatcactaccacgtca 28469296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 108 - 206
Target Start/End: Original strand, 4226216 - 4226314
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatcc 206  Q
    ||||||||||||||||||||||||   ||   |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  4226216 ttaatcatttaaaatttcgtccttcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcatcatcc 4226314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 195
Target Start/End: Original strand, 32687406 - 32687575
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||||||| || |||| ||||||| || |||||||| || |||| |||||||| |||| ||||||| || ||||||||    ||||||||||||||||||    
T  32687406 atgtgttttgtccttgtaattaggggtcatttaaaatttggtccctgtaatcgttaatcctggcaaattgcccttgcaaatattaatcatttaaaatttc 32687505  T
Q  126 gtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaatac 195  Q
    || | |||||| | | ||| |||||||| |||||||||||||||||| |||||||| ||||| |||||||    
T  32687506 gttccttgacccaatcaatgactgccacttcatcaaattagcaaaattgcatgggaatggaccaaaatac 32687575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 6253492 - 6253583
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||||| ||  |||||||||| |||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  6253492 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtcc 6253583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 13044681 - 13044807
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||||| |||| ||||||||||||||  |||||||| || ||||  |||||||||| | ||| ||||||||| ||||||||||||||||||||||| |||    
T  13044681 atgtgtctcgtccttgcaattaggcgccatttaaaatttcgtcccagtaatcgctactcctgacaatttaccattgcattgtttaatcatttaaaaattc 13044780  T
Q  126 gtcctttgaccaacttaatcactgcca 152  Q
    |||| || || ||||||||||||||||    
T  13044781 gtcccttaacaaacttaatcactgcca 13044807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 22871684 - 22871570
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| || ||||||||||| |||| |||||| |||||| || |||||||||||||||||||||||||||||||||||||| ||| |   ||     
T  22871684 cttgcaattaggggtcatttaaaaattggtccctgtaatagctaatccttgcaatttacccttgcattgtttaatcatttaaaatttcttccctctcccc 22871585  T
Q  138 acttaatcactgcca 152  Q
    |||||||||||||||    
T  22871584 acttaatcactgcca 22871570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 32680989 - 32680855
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || |||||||||||||||  |||||||||| |||| |||||| |||||| ||||||||||| ||||||| |  ||||||||||||    
T  32680989 ttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccatgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 32680890  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |   || |||||||||||||||||    
T  32680889 aatttcgtccctctccccacttaatcactgccacg 32680855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 199
Target Start/End: Original strand, 12228474 - 12228567
Alignment:
Q  106 gtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    ||||||||||||||||||||||| ||| ||| ||||||| |||| ||||||||||||||| |||||||||||| || |||||||||||||||||    
T  12228474 gtttaatcatttaaaatttcgtcgtttaacccacttaatgactgtcacgtcatcaaattaacaaaatggcatgagaatggacaaaaataccctc 12228567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 19204510 - 19204626
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||| ||||||| ||  |||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |   ||     
T  19204510 cttgaaattaggggtcgtttaaaaattggtccctgtaatcgttaattctggcaatttacccttgcattgtttaatcatttaaaattttgtccctctcccc 19204609  T
Q  138 acttaatcactgccacg 154  Q
    ||||||||| |||||||    
T  19204610 acttaatcattgccacg 19204626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 27991760 - 27991876
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||| |||||  ||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |   ||     
T  27991760 cttgcaattaggggtcgtttagaaattgatccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctcccc 27991859  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  27991860 acttaatcactgccacg 27991876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 157
Target Start/End: Original strand, 30948156 - 30948300
Alignment:
Q  13 ttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaat 112  Q
    |||||||||| ||||||||||    ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||    
T  30948156 ttttggtttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaat 30948255  T
Q  113 catttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    | |||||||||| |||||| |||||| ||||||||||||||||||    
T  30948256 cgtttaaaatttggtccttggaccaaattaatcactgccacgtca 30948300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 13050200 - 13050078
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgc-attgtttaatcatttaaaattt 124  Q
    ||||||||||| ||||||||||||||| |||| ||| || |||| |||||||| |||| |||| ||||||||||||| ||||||||||||||||||| |     
T  13050200 atgtgtttcgtccttgcaattaggcgtaattttaaatttcgtccctgtaatcgttaatcctggtaatttacccttgcaattgtttaatcatttaaaaatc 13050101  T
Q  125 cgtcctttgaccaacttaatcact 148  Q
    ||||| |||||| |||||||||||    
T  13050100 cgtccattgacc-acttaatcact 13050078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 17102396 - 17102277
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||| ||||||||||||    
T  17102396 cttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaactagccttgcaatcattaatcatttaaaatttagtcctttgacca 17102297  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  17102296 acttaatcactgccacgtca 17102277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 27397002 - 27396883
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| ||||||||||||| ||| ||||| |||  |||||||||||||||||||||||||||||| |   ||     
T  27397002 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaattcaccactgcattgtttaatcatttaaaatttcgtccctctcccc 27396903  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  27396902 acttaatcactgccacgtca 27396883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 27992115 - 27991996
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||| ||||||||||||    
T  27992115 cttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgacca 27992016  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  27992015 acttaatcactgccacgtca 27991996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 45914615 - 45914714
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatcca 207  Q
    |||||||||||||||||||||| |   ||   |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||    
T  45914615 ttaatcatttaaaatttcgtccctcttcccgattaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcatcatcca 45914714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 56 - 206
Target Start/End: Original strand, 13384541 - 13384691
Alignment:
Q  56 ttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgt 155  Q
    |||||| || |||| ||||||||||||| || ||||  ||||||||||    |||||||||||||||||||||| |  ||  ||||||| ||| ||| ||    
T  13384541 ttaaaatttggtccctgtaatcgctaatcctagcaaactacccttgcaaacgttaatcatttaaaatttcgtccctacactcacttaattactcccatgt 13384640  T
Q  156 catcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatcc 206  Q
    |||||||||| ||||||| ||||||| ||||||||||||||||| ||||||    
T  13384641 catcaaattaacaaaatgacatgggaatggacaaaaataccctcatcatcc 13384691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 23181400 - 23181310
Alignment:
Q  39 ttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    ||||||||||| ||  |||||| ||| |||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  23181400 ttgcaattaggggtcgtttaaatattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 23181310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 156
Target Start/End: Complemental strand, 45011011 - 45010893
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| || | |||| |||||||| || |||||||||||||||||||||||||||||||||||||||||  |   ||     
T  45011011 cttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaatttacccttgcattgtttaatcatttaaaatttcgtctctctcccc 45010912  T
Q  138 acttaatcactgccacgtc 156  Q
    |||||||||||||||||||    
T  45010911 acttaatcactgccacgtc 45010893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 2640552 - 2640495
Alignment:
Q  71 tgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2640552 tgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 2640495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 199
Target Start/End: Original strand, 5455916 - 5456009
Alignment:
Q  106 gtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    |||||||||||||||||||| ||| |  ||| ||||||| |||||||| |||||||||||||||||||||||| || |||||||||||||||||    
T  5455916 gtttaatcatttaaaatttcatccctacacccacttaattactgccacatcatcaaattagcaaaatggcatgagaatggacaaaaataccctc 5456009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 157
Target Start/End: Original strand, 34928657 - 34928790
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||| |||||||||    
T  34928657 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 34928756  T
Q  124 tcgtcctttgaccaacttaatcactgccacgtca 157  Q
    | |||||| |||||| ||||||||||||||||||    
T  34928757 tggtccttggaccaaattaatcactgccacgtca 34928790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 159
Target Start/End: Original strand, 42362471 - 42362592
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| ||||||||| ||| |||| || |||| ||||||||||||| |||||||||||||||||||||||||| |||     
T  42362471 cttgcaattaggtgtcgtttaaaaattggtccttgtattcgttaatccttgcaaattacccttgcattctttaatcatttaaaatttcgtcctttaaccc 42362570  T
Q  138 acttaatcactgccacgtcatc 159  Q
    | ||||||  ||||| ||||||    
T  42362571 agttaatcgttgccaggtcatc 42362592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 6571034 - 6571150
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||||||| |||| ||| |||||||||||||||||||||||||||||||||||| |||| |   ||     
T  6571034 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctgacaatttacccttgcattgtttaatcatttaaaattttgtccctctcccc 6571133  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||| ||||    
T  6571134 acttaatcactgtcacg 6571150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 157
Target Start/End: Original strand, 2640203 - 2640318
Alignment:
Q  42 caattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaactt 141  Q
    |||||||| ||  |||||||||| || | |||| |||||||| || |||| |||  |||||| |  ||||||||||||||||||||||||||||||||||    
T  2640203 caattaggggtcgtttaaaaattggtacctgtattcgctaatccttgcaaattagtcttgcaatcattaatcatttaaaatttcgtcctttgaccaactt 2640302  T
Q  142 aatcactgccacgtca 157  Q
    ||||||||||||||||    
T  2640303 aatcactgccacgtca 2640318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 10936201 - 10936082
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||| |||||||||| ||||||||| |||||||| || ||||  || ||||||| |  ||||||||||||||||||||||||||  ||    
T  10936201 cttgcaattaggggttgtttaaaaattggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttggaca 10936102  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||| |||| |||||    
T  10936101 acttaatcattgccgcgtca 10936082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 39686555 - 39686674
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||| |||||||||| |||||| |||||    
T  39686555 cttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttggtccttggacca 39686654  T
Q  138 acttaatcactgccacgtca 157  Q
    | ||||||||||||||||||    
T  39686655 aattaatcactgccacgtca 39686674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 40379790 - 40379909
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| ||| ||||| |||||||| || |||||||||| ||| ||||||||||||||||||||||||||| |   ||     
T  40379790 cttgcaattaggggtcgtttaaaaattggtctttgtattcgctaatccttgcaatttacctttgtattgtttaatcatttaaaatttcgtccctctcccc 40379889  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||| ||||||||||    
T  40379890 acttaatcaatgccacgtca 40379909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 157
Target Start/End: Original strand, 45010648 - 45010738
Alignment:
Q  67 tccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |   || ||||||||||||||| ||||    
T  45010648 tccttgtaatcgctaatcttggcaatttacgcttgcattgtttaatcatttaaaatttcgtccatctccccacttaatcactgccaagtca 45010738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 123
Target Start/End: Complemental strand, 16804052 - 16803967
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||||| ||  |||||||||| |||| ||||||||| ||| || ||||||||||||||||||||||||||||||||||||    
T  16804052 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgccaatcctagcaatttacccttgcattgtttaatcatttaaaatt 16803967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 3914194 - 3914274
Alignment:
Q  73 taatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    |||||||||||||| |||||||||  ||||||||||||||||||||||||||||||| |   |||||||||||||||||||    
T  3914194 taatcgctaattctagcaatttacatttgcattgtttaatcatttaaaatttcgtccctcttccaacttaatcactgccac 3914274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 42020026 - 42019914
Alignment:
Q  16 tggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcat 115  Q
    ||||||||  |||| |||| | |||||||||||| ||| |||||||||| || | | |||||||||||  ||||||||||| ||||||||||||||| ||    
T  42020026 tggtttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggttcctataatcgctaatcttggcaatttactcttgcattgtttaattat 42019927  T
Q  116 ttaaaatttcgtc 128  Q
    |||||||||||||    
T  42019926 ttaaaatttcgtc 42019914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 5457314 - 5457195
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| ||||||||| ||| |||| || |||| |||||||| || ||||||||||||||||||||||||| |   ||     
T  5457314 cttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaattaccctttcaatgtttaatcatttaaaatttcgtccctcatccc 5457215  T
Q  138 acttaatcactgccacgtca 157  Q
    | ||||||||||||||||||    
T  5457214 agttaatcactgccacgtca 5457195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 6253847 - 6253728
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| ||||||||| |||||||| || ||||   |  |||||| |  ||||||||||||||||| ||||||||||||    
T  6253847 cttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgcaaacaagtcttgcaatcattaatcatttaaaatttagtcctttgacca 6253748  T
Q  138 acttaatcactgccacgtca 157  Q
    |||||||||||| |||||||    
T  6253747 acttaatcactgtcacgtca 6253728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 17885649 - 17885768
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| || ||||| || ||||  || ||||||| |  |||||||||||||||||||||||||||||     
T  17885649 cttgcaattaggggtcgtttaaaaattggtccctgtattctctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccc 17885748  T
Q  138 acttaatcactgccacgtca 157  Q
    | ||||||||||||||||||    
T  17885749 agttaatcactgccacgtca 17885768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 157
Target Start/End: Original strand, 48788812 - 48788943
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||| |||| |||||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||||    
T  48788812 atgtatttcattcttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 48788911  T
Q  126 gtcctttgaccaacttaatcactgccacgtca 157  Q
     || ||||||||||||||||| || |||||||    
T  48788912 atcatttgaccaacttaatcagtgtcacgtca 48788943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 12644142 - 12644044
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatcc 206  Q
    |||||||||||||||||||||| |   ||   ||||||||||||||||||||||||||||||||||||||| || || |||||||| ||||| ||||||    
T  12644142 ttaatcatttaaaatttcgtccctcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgagaatgaacaaaaatgccctcatcatcc 12644044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 24389192 - 24389078
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || | ||||| |  ||||||||||||||||| ||||||||||||    
T  24389192 cttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagcattgcaatcattaatcatttaaaattttgtcctttgacca 24389093  T
Q  138 acttaatcactgcca 152  Q
    |||||||||||||||    
T  24389092 acttaatcactgcca 24389078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 30948550 - 30948420
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  ||||||||||||||||    
T  30948550 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatt 30948451  T
Q  124 tcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||| |   || |||||||||||||||||    
T  30948450 tcgtccctctccccacttaatcactgccacg 30948420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 125
Target Start/End: Complemental strand, 48789177 - 48789123
Alignment:
Q  71 tgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  48789177 tgtaatcgttaattctggcaatttacccttgcattgtttaatcatttaaaatttc 48789123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 151
Target Start/End: Original strand, 28469031 - 28469144
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||||| || ||||||||  | ||||  || ||||||| |  ||||||||||||||||||||||||||||||    
T  28469031 cttgcaattaggggtcgtttaaaaattggtccttatattcgctaatctttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacca 28469130  T
Q  138 acttaatcactgcc 151  Q
    ||||||||| ||||    
T  28469131 acttaatcattgcc 28469144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 42731756 - 42731707
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42731756 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 42731707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 22661481 - 22661537
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  22661481 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 22661537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 27480111 - 27480167
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  27480111 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 27480167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 10600031 - 10600102
Alignment:
Q  22 aatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatt 93  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||| | |||||| |||| |||||||||    
T  10600031 aatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcgttaatcctggcaatt 10600102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 13386154 - 13386035
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| | || |||||||| || ||||  || ||||||| ||||||||||||||||||||  ||||||||||     
T  13386154 cttgcaattaggggtcgtttaaaaattggtccctatattcgctaatccttgcaaactagccttgcaatgtttaatcatttaaaattttatcctttgaccc 13386055  T
Q  138 acttaatcactgccacgtca 157  Q
    | ||||||||||||| ||||    
T  13386054 agttaatcactgccatgtca 13386035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 17886897 - 17886778
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||||  | |||||||||||  ||| |||| ||| |||| || ||||  ||||||||||    |||||||||||||||||||||| ||||||     
T  17886897 cttgcaattagggatcatttaaaaattgatccatgtattcgttaatccttgcaaactacccttgcaaatattaatcatttaaaatttcgtcccttgaccc 17886798  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  17886797 acttaatcactgccacgtca 17886778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 24388840 - 24388955
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||| | ||  |||||||||| |||  |||| ||||||||  |||||||||||||||| |||||||||||| |||||||||||||| |   ||     
T  24388840 cttgcaattatgggtcgtttaaaaattggtctctgtattcgctaatcatggcaatttacccttgtattgtttaatcacttaaaatttcgtccctctcccc 24388939  T
Q  138 acttaatcactgccac 153  Q
    ||||||||||||||||    
T  24388940 acttaatcactgccac 24388955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 6571322 - 6571240
Alignment:
Q  71 tgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    |||| ||| ||||||| ||||  || ||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  6571322 tgtactcgttaattcttgcaaactagccttgcaattattaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 6571240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 34929040 - 34928910
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||| |||||||||    
T  34929040 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 34928941  T
Q  124 tcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||| |   || |||||||||||||||||    
T  34928940 tcgtccctctccccacttaatcactgccacg 34928910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 39686924 - 39686794
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||| |||||||||    
T  39686924 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 39686825  T
Q  124 tcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||| |   || |||||||||||||||||    
T  39686824 tcgtccctctccccacttaatcactgccacg 39686794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 206
Target Start/End: Original strand, 47558153 - 47558219
Alignment:
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatcc 206  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||| |||||||||||| ||||||    
T  47558153 ttaatcactgtcacgtcatcaaattagcaaaatgtcatgggaatggataaaaataccctcatcatcc 47558219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 22871399 - 22871448
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22871399 ttaatcatttaaaatttcgtcctttgaccaatttaatcactgccacgtca 22871448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 27480723 - 27480667
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||| |||||||||||||||||||||||||||||||| | |||||||||||||    
T  27480723 taatcactaccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 27480667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 37656852 - 37656964
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||  |||| |||| | ||||||||||||  |  |||||||||| |||  ||||||||||||| || ||||||||| ||||||||||||| | |||    
T  37656852 ggtttaaatatgtatttcatccttgcaattaggaatcgtttaaaaattggtctctgtaatcgctaatcctcgcaatttacgcttgcattgtttatttatt 37656951  T
Q  117 taaaatttcgtcc 129  Q
    |||||||||||||    
T  37656952 taaaatttcgtcc 37656964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 37657187 - 37657139
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtc 156  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37657187 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgacacgtc 37657139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 12643223 - 12643282
Alignment:
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    ||||||||||||||||||||||||||||  |||||||| ||| |||||||||||||||||    
T  12643223 ttaatcactgccacgtcatcaaattagcttaatggcataggaatggacaaaaataccctc 12643282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 3914524 - 3914426
Alignment:
Q  59 aaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||| |||| |||| |||||||| || ||||  || ||||||| |  |||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  3914524 aaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcatcatttgaccaacttaatcactgccatgtca 3914426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 27396667 - 27396765
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    |||||||||| |||| |||| |||||||| || ||||  ||  |||||| |  |||||||||||||||||| || ||||||||||||||||||||||||    
T  27396667 tttaaaaattggtccatgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcatcatttgaccaacttaatcactgccac 27396765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 157
Target Start/End: Complemental strand, 32053533 - 32053431
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| || | | |||||| |||| || |||||||| | ||||||||||||||||||||||||||||||| |   || |||||||||||| ||||    
T  32053533 tttaaaaattggttcctataatcgttaatcctagcaatttatcattgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgtcacg 32053434  T
Q  155 tca 157  Q
    |||    
T  32053433 tca 32053431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 4227149 - 4227093
Alignment:
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaatacc 196  Q
    |||||||||||||| |||| ||||||||||||||||||| || ||||||||||||||    
T  4227149 ttaatcactgccacatcataaaattagcaaaatggcatgagaatggacaaaaatacc 4227093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 195
Target Start/End: Complemental strand, 29144339 - 29144232
Alignment:
Q  88 gcaatttacccttgcattgtttaatcatttaaaatttcgtc-ctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtgga 186  Q
    |||| ||||| ||||||||||||||||||||||||||| || || |  |||  |||||||||| ||  |||||||||||||||||| | |||||| ||||    
T  29144339 gcaacttacctttgcattgtttaatcatttaaaatttcatctctatttccag-ttaatcactgtcatctcatcaaattagcaaaattgtatgggaatgga 29144241  T
Q  187 caaaaatac 195  Q
    |||||||||    
T  29144240 caaaaatac 29144232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 47945469 - 47945537
Alignment:
Q  138 acttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatcc 206  Q
    ||||||| || ||||| ||||||||||| ||||||||||| ||| ||||||||||||||||| ||||||    
T  47945469 acttaatgaccgccacatcatcaaattaacaaaatggcataggaatggacaaaaataccctcatcatcc 47945537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 47950899 - 47950967
Alignment:
Q  138 acttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatcc 206  Q
    ||||||| || ||||| ||||||||||| ||||||||||| ||| ||||||||||||||||| ||||||    
T  47950899 acttaatgaccgccacatcatcaaattaacaaaatggcataggaatggacaaaaataccctcatcatcc 47950967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 157
Target Start/End: Complemental strand, 19204861 - 19204746
Alignment:
Q  42 caattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaactt 141  Q
    |||||||| ||  |||||||||| || | ||||||||||||| || ||||  || | ||||| |  ||||| |||||||||||| || ||||||||| ||    
T  19204861 caattaggggtggtttaaaaattggttcatgtaatcgctaatccttgcaaactagctttgcaatcattaattatttaaaatttcatcatttgaccaattt 19204762  T
Q  142 aatcactgccacgtca 157  Q
    ||||||||||||||||    
T  19204761 aatcactgccacgtca 19204746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 32298863 - 32298906
Alignment:
Q  110 aatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  32298863 aatcatttaaaatttcgtcatttgaccaacttaatcactgccac 32298906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 42019618 - 42019737
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||| | ||  |||||||||| |||| |||| |||||||| || ||||  || | ||| | |  |||||||||||||||||||| |||||||||    
T  42019618 cttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagctttgtaatcattaatcatttaaaatttcgttctttgacca 42019717  T
Q  138 acttaatcactgccacgtca 157  Q
    | ||||||||||| ||||||    
T  42019718 aattaatcactgctacgtca 42019737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 22828237 - 22828111
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||| | |||| ||||||| || ||||||||||| ||||||||||||| ||||  || ||| |||||| ||||    ||||||||||||||||||    
T  22828237 atgtgtttcatccttgtaattaggggtcatttaaaaattggtccttgtaatcgttaatcttgacaaattacccctgcaaaccttaatcatttaaaatttc 22828138  T
Q  126 gtcctttgaccaacttaatcactgcca 152  Q
     ||  || ||| |||||||||| ||||    
T  22828137 atcacttaacccacttaatcaccgcca 22828111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 32053234 - 32053279
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    |||||||||||||||||| || ||||||||||||||||||||||||    
T  32053234 ttaatcatttaaaatttcatcttttgaccaacttaatcactgccac 32053279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #104
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 20426720 - 20426646
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||| |||| |||| |||||||| |||||| ||||||||  ||  ||||||||||||||||||| ||||    
T  20426720 tttaaaaattggtccctgtattcgctaatcctggcattttaccctcacaaagtttaatcatttaaaatttagtcc 20426646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #105
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 12229411 - 12229359
Alignment:
Q  106 gtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcat 158  Q
    ||||||||||| |||||||||||| || ||| ||||||| |||||||||||||    
T  12229411 gtttaatcattaaaaatttcgtcccttaacccacttaatgactgccacgtcat 12229359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #106
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 41899224 - 41899268
Alignment:
Q  4 tatataattttttggtttaatgatgtgtttcgttcttgcaattag 48  Q
    ||||||| |||| |||||||||||||||||||| |||||||||||    
T  41899224 tatataaattttaggtttaatgatgtgtttcgtccttgcaattag 41899268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #107
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 151
Target Start/End: Original strand, 22827085 - 22827128
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgcc 151  Q
    |||||||||||||||||||| | |||||| ||||||||||||||    
T  22827085 ttaatcatttaaaatttcgttccttgacccacttaatcactgcc 22827128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #108
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 40380091 - 40380000
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||||| ||  |||||||||| |||| |||| |||| ||| || ||||  || ||||||| |  ||||||||||||||||||||||    
T  40380091 cttgcaattaggagtcgtttaaaaattggtccatgtattcgccaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcc 40380000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 121)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 20 - 250
Target Start/End: Original strand, 40714447 - 40714677
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||    
T  40714447 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaa 40714546  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  40714547 aatttcgtcatttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatccattcgtgaaatga 40714646  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    ||||||||||| || |||||||||| |||||    
T  40714647 catttttacccctgtcttcatcttcttctca 40714677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 15 - 243
Target Start/End: Original strand, 49955345 - 49955573
Alignment:
Q  15 ttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatca 114  Q
    |||| ||||||||||||||||| ||||||||||||| | |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  49955345 ttggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 49955444  T
Q  115 tttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaa 214  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  49955445 tttaaaattttgtcctttgaccaacttaatcactgccacatcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatccattcgtga 49955544  T
Q  215 aatgacatttttacccatgacttcatctt 243  Q
    |||||||||||||||| || |||||||||    
T  49955545 aatgacatttttacccctgtcttcatctt 49955573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 20 - 250
Target Start/End: Original strand, 8898520 - 8898750
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||| |||| |||||||||||||||||    
T  8898520 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaattctggtaatttactcttgtattgtttaatcatttaa 8898619  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  8898620 aatttcgtcctttgaccaatttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatccattcgtgaaatga 8898719  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    ||||||||||| || |||||||||| |||||    
T  8898720 catttttacccctgtcttcatcttcttctca 8898750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 45750265 - 45750035
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||| || ||||||||| ||||||||||||||||||||||    
T  45750265 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcctagcaatttactcttgcattgtttaatcatttaa 45750166  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||    
T  45750165 aatttcatcatttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaatatcatcgtcatccattcgtgaaatga 45750066  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    |||||||| ||||| |||||||||| |||||    
T  45750065 catttttatccatgtcttcatcttcttctca 45750035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 31058480 - 31058250
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||| | | |||||||||||||||  |||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  31058480 ttaatgatgtgtttcgtccttgcaattagacatcatttaaaaattagtcaatgtaatcgataatcttggcaatttacccttgcattgtttaatcatttaa 31058381  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||    
T  31058380 aatttcgtattttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatccattcgcgaaatga 31058281  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    ||||||||||| || |||||||||| |||||    
T  31058280 catttttacccctgtcttcatcttcttctca 31058250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 20 - 250
Target Start/End: Original strand, 28324808 - 28325037
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||| | |||||||||||||||  ||||||| ||||| | ||||||||||||| ||| ||||||||||||||||| |||||||||||||    
T  28324808 ttaatgatgtgtttcctccttgcaattaggcgtcgtttaaaa-ttagttcatgtaatcgctaatcctgacaatttacccttgcattatttaatcatttaa 28324906  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||    
T  28324907 aatttcgtcttttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatggaaatggacaaaaataccctcgtcatccattcgtgaaatga 28325006  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    ||||||||||| || |||||||||| |||||    
T  28325007 catttttacccctgtcttcatcttcttctca 28325037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 49955770 - 49955588
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  49955770 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaa 49955671  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  49955670 aatttcgtcctttgaccaacttaatcaccgccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtc 49955588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 202
Target Start/End: Complemental strand, 35041039 - 35040855
Alignment:
Q  18 gtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcattt 117  Q
    ||||||||||||||||||| |||| |||||| ||| |||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  35041039 gtttaatgatgtgtttcgtccttgtaattagccgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 35040940  T
Q  118 aaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35040939 aaaatttcgtcctttgaccaacttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtc 35040855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 17188957 - 17189139
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  17188957 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattatttaatcatttaa 17189056  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||| |||||||| |||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17189057 aatttcgtcatttgaccagcttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtc 17189139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 40714866 - 40714685
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  40714866 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacctttgcattgtttaatcatttaa 40714767  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  40714766 aatttcgtcctttgaccaacttaatcactaccaagtcatcaaattagcaaaatggcat-ggaatggacaaaaataccctcgtc 40714685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 35038455 - 35038688
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||| ||||||||||| |||||||||| | || |||||||||||  ||| |||||||| |||| || |||| ||||  ||| ||||||||||||||    
T  35038455 ggtttaataatgtgtttcgtccttgcaattaagggtcatttaaaaattgatccatgtaatcgttaatcctagcaaattacttttgtattgtttaatcatt 35038554  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaa 216  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||| |||    
T  35038555 taaaatttcgtcctttgaccaactcaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaatatcctcatcatccattcgtgaaa 35038654  T
Q  217 tgacatttttacccatgacttcatcttcatctca 250  Q
    |||||||||||||| || |||||||||| |||||    
T  35038655 tgacatttttacccctgtcttcatcttcttctca 35038688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 7371290 - 7371475
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    ||||||||||| |||||||| |||||||||||| || ||||||||||||||   |||||||||| ||||||| |||||| |||||||||||||||| |||    
T  7371290 ggtttaatgatatgtttcgtccttgcaattaggtgtcatttaaaaattagtttctgtaatcgctgattctggtaatttatccttgcattgtttaattatt 7371389  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7371390 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtc 7371475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 20 - 201
Target Start/End: Complemental strand, 20760928 - 20760747
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20760928 ttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 20760829  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgt 201  Q
    ||||||||||||||||||||||||||||| |||  ||||||||||||||||||| ||||||| |||||||||||||| ||||    
T  20760828 aatttcgtcctttgaccaacttaatcactaccaaatcatcaaattagcaaaatgacatgggaatggacaaaaataccatcgt 20760747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 45749845 - 45750027
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||||||| ||||||||| |||| ||| |||||||| ||||||||||||||||||||||    
T  45749845 ttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctgacaatttacacttgcattgtttaatcatttaa 45749944  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  45749945 aatttcgtcctttgacaaacttaatcactaccaagtcatcaaattagcaaaatggcatgagaatggacaaaaataccctcgtc 45750027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 20 - 201
Target Start/End: Complemental strand, 12906082 - 12905901
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||| | | | |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12906082 ttaatgatgtgtttcgtccttgcaatttgacatcatttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 12905983  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgt 201  Q
    ||||||||| |||||||||||||||||||| || |||||||||||| |||||||||||| || |||||||||||||||||||    
T  12905982 aatttcgtcatttgaccaacttaatcactgtcaagtcatcaaattaacaaaatggcatgagaatggacaaaaataccctcgt 12905901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 31050953 - 31051114
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  31050953 ttaatgatgtgtttcgtccttgcaattaggcgttatttaaaaattagtctctgtaatcgctaatcctggcaatttacctttgcattgtttaatcatttaa 31051052  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatggga 181  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  31051053 aatttcgtcctttgaccaacttaatcactaccaagtcatcaaattagtaaaatggcatggga 31051114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 8898940 - 8898758
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||  ||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  8898940 ttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcactaatactgacaatttacccttgcattgtttaatcatttaa 8898841  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||| ||||||||||||||||||| ||| |||||||||||||||||||| || |||| ||||||||||||||||||||    
T  8898840 aatttcgtcatttgaccaacttaatcactaccaagtcatcaaattagcaaaatgacacgggaatggacaaaaataccctcgtc 8898758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 20 - 194
Target Start/End: Original strand, 37929421 - 37929595
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| ||||||||| ||| |||||||||||| |||| |||||||||||||    
T  37929421 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgttatcgctaatcctgacaatttacccttacattatttaatcatttaa 37929520  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaata 194  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| || ||||||||||||    
T  37929521 aatttcgtcctttgaccaacttaatcactgtaacgtcatcaaattagcaaaatggcatgagaatggacaaaaata 37929595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 20 - 194
Target Start/End: Original strand, 30326499 - 30326673
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30326499 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaattctggtaatttacccttgcattgtttaatcatttaa 30326598  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaata 194  Q
    ||||||| | ||| || |||||||||||| ||| |||||||||||||||||||| ||||||| ||||||||||||    
T  30326599 aatttcgacatttaactaacttaatcactaccaagtcatcaaattagcaaaatgacatgggaatggacaaaaata 30326673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 28325226 - 28325045
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||||| | ||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  28325226 ttaatgatgtgtttcggccttgcaattaggcgtcatttaaaaattagtcat-gtaatcgttaattatggcaatttacccttgcattgtttaatcatttaa 28325128  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||| |||||||||||||||||||  || |||||||||||||||||||| ||| ||| |||||||||||| |||||||    
T  28325127 aatttcgtcttttgaccaacttaatcactatcaagtcatcaaattagcaaaatgacataggaatggacaaaaatatcctcgtc 28325045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 34464444 - 34464589
Alignment:
Q  12 tttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaa 111  Q
    ||||||| ||||  |||| |||| | |||||||||||| ||  |||||||||| |||| |||||||||||||  |||||||||||||||||| |||||||    
T  34464444 tttttggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaa 34464543  T
Q  112 tcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  34464544 tcatttaaaatttcgtcatttgaccaacttaatcactgccacgtca 34464589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 7820975 - 7821094
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  ||||| ||||||||| ||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7820975 cttgcaattaggggtcctttaataattagtccctgtaatcgctaatccttacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 7821074  T
Q  138 acttaatcactgccacgtca 157  Q
    || |||||||||||||||||    
T  7821075 acgtaatcactgccacgtca 7821094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 17189274 - 17189173
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||| ||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17189274 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 17189175  T
Q  120 aa 121  Q
    ||    
T  17189174 aa 17189173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 24905170 - 24905307
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || ||||||||||||||| ||||||||||| |||| |||||| |||||| || |||||||| ||||||| |  ||||||||||||    
T  24905170 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaatcatttaa 24905269  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  24905270 aatttggtccttggaccaacttaatcactgccacgtca 24905307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 28011762 - 28011625
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || ||||||||||||||| ||||||||||| |||| |||||| |||||| ||||||||||| ||||||| |  ||||||||||||    
T  28011762 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 28011663  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||| |||||| ||||||||||||||||| |||||||    
T  28011662 aatttggtccttggaccaacttaatcactgtcacgtca 28011625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 26 - 206
Target Start/End: Original strand, 32132313 - 32132493
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| | | |||||||  || ||||||||||| |||| |||||||| |||| || |||| |||| ||| ||  ||||||||| ||||||||||    
T  32132313 atgtgtttcgtccctccaattagtggtcatttaaaaattcgtccatgtaatcgttaatccttgcaaattactcttacaaagtttaatcaattaaaatttc 32132412  T
Q  126 gtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatcc 206  Q
    |||| |  ||| ||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||| |||| ||||||    
T  32132413 gtccctacacccacttaattactgccacgtcatcaaattagcaaaatgtcatgggaatggacaaaaataacctcatcatcc 32132493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 6367583 - 6367702
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |   ||     
T  6367583 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccc 6367682  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  6367683 acttaatcactgccacgtca 6367702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 39 - 157
Target Start/End: Complemental strand, 40210776 - 40210658
Alignment:
Q  39 ttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaa 138  Q
    ||||||||||| |   |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |   || |    
T  40210776 ttgcaattaggggccgtttaaaaattggtctttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccca 40210677  T
Q  139 cttaatcactgccacgtca 157  Q
    |||||||||||||||||||    
T  40210676 cttaatcactgccacgtca 40210658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 5734019 - 5734191
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||| |||||| |||||||||||| ||  |||||||||| ||| | |||||||||||| || |||| |||  |||||||||||||||||||||||||||     
T  5734019 atgtatttcgtccttgcaattaggggtcgtttaaaaattggtcat-gtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaatttt 5734117  T
Q  126 gtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    |||| |  |||   ||||| |||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  5734118 gtccctgcacccgtttaattactgtcacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 5734191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 13914474 - 13914355
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||  ||| |||||||||| |||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |   ||     
T  13914474 cttgcaattagaggttgtttaaaaattggtccatgtaatcgctaatcctggcaatttacccttgtattgtttaatcatttaaaatttcgtccctctcccc 13914375  T
Q  138 acttaatcactgccacgtca 157  Q
    ||| ||||||||||||||||    
T  13914374 actaaatcactgccacgtca 13914355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 23209734 - 23209620
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||| |   ||     
T  23209734 cttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgcattgttcaatcatttacaatttcgtccctctcccc 23209635  T
Q  138 acttaatcactgcca 152  Q
    |||||||||||||||    
T  23209634 acttaatcactgcca 23209620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 26024442 - 26024560
Alignment:
Q  36 ttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgac 135  Q
    |||||||||||||| ||  |||||||||| |||  ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |   |    
T  26024442 ttcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaagttcgtccctctcc 26024541  T
Q  136 caacttaatcactgccacg 154  Q
    | |||||||||||||||||    
T  26024542 ccacttaatcactgccacg 26024560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 44523561 - 44523456
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||| |   | |||||||||||  ||||||||||||||||||||||||||||||||||    
T  44523561 ttaatgatgtgtttcgtccttgcaattaggcctcatttaaaaattaatatctataatcgctaatcatggcaatttacccttgcattgtttaatcatttaa 44523462  T
Q  120 aatttc 125  Q
    ||||||    
T  44523461 aatttc 44523456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 13914089 - 13914208
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  ||||||||||||||| |||| |||||||| || |||| |||  |||||| |  ||||||||||||||||||||||||||||||    
T  13914089 cttgcaattaggggtcgtttaaaaattagtccatgtattcgctaatccttgcaaattagtcttgcaatcattaatcatttaaaatttcgtcctttgacca 13914188  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||| ||||||||    
T  13914189 acttaatcactaccacgtca 13914208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 24009948 - 24009833
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||||  |  |||||||||| ||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |   ||     
T  24009948 cttgcaattagggatcgtttaaaaattggtcattgtaatcgccaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccc 24009849  T
Q  138 acttaatcactgccac 153  Q
    ||||||||||||||||    
T  24009848 acttaatcactgccac 24009833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 34464856 - 34464737
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||| |||||||||| |||| |||||||||||||  |||||||||||||||||| |||||||||||||||||||| |||| |   ||     
T  34464856 cttgcaattaggggttgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcatttaaaattttgtccctctcccc 34464757  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||| ||||    
T  34464756 acttaatcactgccatgtca 34464737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 157
Target Start/End: Original strand, 4960562 - 4960680
Alignment:
Q  39 ttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaa 138  Q
    ||||||||||| ||  ||||||||||  || ||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||| |   || |    
T  4960562 ttgcaattaggggtcgtttaaaaattgctctttgtattcgctaatccttgcaatttacccttgcattgtttaatcatttaaaatttcgtccctcttccca 4960661  T
Q  139 cttaatcactgccacgtca 157  Q
    |||||||||||||||||||    
T  4960662 cttaatcactgccacgtca 4960680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 152
Target Start/End: Original strand, 19515840 - 19515954
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| ||| ||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||| |   ||     
T  19515840 cttgcaattaggggtcgtttaaaaattggtctttgtaatcgttaattctggaaatttacccttgcattgtttaattatttaaaatttcgtccctctcccc 19515939  T
Q  138 acttaatcactgcca 152  Q
    |||||||||||||||    
T  19515940 acttaatcactgcca 19515954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 32558530 - 32558416
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    |||||||||||||| || ||| ||||||| ||| |||||||||||||| | | ||||||||||| |||  |||||||||||| | |||||||||||||||    
T  32558530 ttaatgatgtgttttgtccttacaattagacgtcatttaaaaattagttcctataatcgctaatcctgataatttacccttgtaatgtttaatcatttaa 32558431  T
Q  120 aatttcgtcctttga 134  Q
    |||||||||||||||    
T  32558430 aatttcgtcctttga 32558416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 128
Target Start/End: Complemental strand, 36694655 - 36694565
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 128  Q
    |||||||||||| ||| |||||||||| |||  ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  36694655 cttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtc 36694565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 128
Target Start/End: Complemental strand, 36710756 - 36710666
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 128  Q
    |||||||||||| ||| |||||||||| |||  ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  36710756 cttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtc 36710666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 42248494 - 42248611
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||  ||  |||||||||| ||| ||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||| |   ||     
T  42248494 cttgcaattagtggtcgtttaaaaattggtctttgtagtcgctaatcgtggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccc 42248593  T
Q  138 acttaatcactgccacgt 155  Q
    ||||||||||||||||||    
T  42248594 acttaatcactgccacgt 42248611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 25647905 - 25648021
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||||||| |||| |||||||||||||| |||||| ||||||||||||||||||||||| |   ||     
T  25647905 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattatttaatcatttaaaatttcgtccctctcccc 25648004  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  25648005 acttaatcactgccacg 25648021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 6367969 - 6367850
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||| | ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||||||||||||||||    
T  6367969 cttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacca 6367870  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  6367869 acttaatcactgccacgtca 6367850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 14878992 - 14879083
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||||| ||  |||||||||| || | |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  14878992 cttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 14879083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 17662257 - 17662138
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||| || ||  |||||||||| || | | |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |   ||     
T  17662257 cttgcaatttggggtcgtttaaaaattggttcctttaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctcttccc 17662158  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  17662157 acttaatcactgccacgtca 17662138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 26024799 - 26024680
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| ||||||||||||| || ||||  ||  |||||| |  ||||||||||||||||||||||||||||||    
T  26024799 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctttgacca 26024700  T
Q  138 acttaatcactgccacgtca 157  Q
    | ||||||||||||||||||    
T  26024699 atttaatcactgccacgtca 26024680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 30711348 - 30711467
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||| ||||||||||  ||  | ||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| | | ||     
T  30711348 cttgcaattaggggttgtttaaaaattgatctctataatcgctaatcctagcaatttatccttgcattgtttaatcatttaaaatttcgtccctcgcccc 30711447  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||| ||||    
T  30711448 acttaatcactgccatgtca 30711467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 41098742 - 41098845
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||| |||| |||||||||||||| ||  |||||||||| |||  ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||     
T  41098742 atgtatttcattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttt 41098841  T
Q  126 gtcc 129  Q
    ||||    
T  41098842 gtcc 41098845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 46163068 - 46163141
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 128  Q
    |||||||||| |||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  46163068 tttaaaaattggtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtc 46163141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 31514318 - 31514458
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||| |||||||||| |  ||||||||||||||  ||||||||||| || | |||||| | ||||||||||| |||| || |||| |  |||||| ||    
T  31514318 ggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgttcctgtaattgttaattctggcattttaaccctgcaattgttaatcgtt 31514417  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||| |||||| |||||| ||||||||||||||||||    
T  31514418 taaaatttggtccttggaccaaattaatcactgccacgtca 31514458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 157
Target Start/End: Original strand, 183246 - 183361
Alignment:
Q  42 caattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaactt 141  Q
    |||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||| ||||||||||||||||    
T  183246 caattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaactt 183345  T
Q  142 aatcactgccacgtca 157  Q
    ||||||||||||||||    
T  183346 aatcactgccacgtca 183361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 183581 - 183482
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |||| ||||||||||||| || ||||||||||| |||||| ||||||||||||||||||||||| |   || |||||||||||||||||    
T  183581 tttaaaaattggtccctgtaatcgctaatcctagcaatttacccctgcattatttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 183482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 129
Target Start/End: Original strand, 1103510 - 1103573
Alignment:
Q  66 gtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1103510 gtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 1103573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 30711734 - 30711615
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||  |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||||||| ||||||||    
T  30711734 cttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcatttgacca 30711635  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  30711634 acttaatcactgccacgtca 30711615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 37578599 - 37578480
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||| || ||  |||||||||| ||  |||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||  |   ||     
T  37578599 cttgcaattgggggtcgtttaaaaattggtttttgtaatcgctaatcctggcaatttacccttacattgattaatcatttaaaatttcgtcactctcccc 37578500  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  37578499 acttaatcactgccacgtca 37578480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 40772528 - 40772619
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||| | ||  |||||||||| |||| ||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||    
T  40772528 cttgcaattatgggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtcc 40772619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 48779526 - 48779407
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||   |||||||||||||| |||| | |||||| || ||||  ||  |||||| |  ||||||||||||||||||||||||||||||    
T  48779526 cttgcaattaggagtcgcttaaaaattagtccatgtatttgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctttgacca 48779427  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  48779426 acttaatcactgccacgtca 48779407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 49723133 - 49723014
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || |||| || |  |||||||||||||||||| |||||||||||    
T  49723133 cttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagcctttcaatcattaatcatttaaaatttcatcctttgacca 49723034  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  49723033 acttaatcactgccacgtca 49723014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 198
Target Start/End: Original strand, 46899084 - 46899242
Alignment:
Q  40 tgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaac 139  Q
    |||||||||| ||  |||||||||| |||| |||| ||||||||||| ||||  || | ||||| |  |||||||||||||||||||||| |   || |     
T  46899084 tgcaattaggggtcgtttaaaaattggtccatgtattcgctaattcttgcaaactagctttgcaatcattaatcatttaaaatttcgtccctgagcccag 46899183  T
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccct 198  Q
    ||||| |||||||| ||||||||| | ||||||||||||||| ||||||||||| ||||    
T  46899184 ttaattactgccacatcatcaaataaacaaaatggcatgggaatggacaaaaatgccct 46899242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 198
Target Start/End: Complemental strand, 46900005 - 46899847
Alignment:
Q  40 tgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaac 139  Q
    |||||||| | || ||||||||||| |||  |||| ||||||||||| ||||  || ||||||| |  |||||||||||||||||||||| |   || |     
T  46900005 tgcaattaagggtcatttaaaaattggtcaatgtattcgctaattcttgcaaactagccttgcaatcattaatcatttaaaatttcgtccctgagcccag 46899906  T
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccct 198  Q
    ||||| |||| |||||||||||||||| |||||||||||||| || |||||||| ||||    
T  46899905 ttaattactgtcacgtcatcaaattagtaaaatggcatgggaatgaacaaaaatgccct 46899847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 157
Target Start/End: Original strand, 33442601 - 33442734
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||  |||||| |||||| |||||| |||| || |||| |  |||||| |||||||||    
T  33442601 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 33442700  T
Q  124 tcgtcctttgaccaacttaatcactgccacgtca 157  Q
    | |||||| |||||| ||||||||||||||||||    
T  33442701 tggtccttggaccaaattaatcactgccacgtca 33442734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 157
Target Start/End: Complemental strand, 52134458 - 52134325
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| | |||| |||||| |||| || |||| |  |||||| |||||||||    
T  52134458 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 52134359  T
Q  124 tcgtcctttgaccaacttaatcactgccacgtca 157  Q
    | |||||| |||||| ||||||||||||||||||    
T  52134358 tggtccttggaccaaattaatcactgccacgtca 52134325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 151
Target Start/End: Complemental strand, 19018019 - 19017923
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgcc 151  Q
    |||||||||| |||| |||| |||||||| ||||||||||||||||||||| |||||||||||||||||| |||| |   || ||||||||||||||    
T  19018019 tttaaaaattggtccatgtattcgctaatcctggcaatttacccttgcattatttaatcatttaaaattttgtccctcttcccacttaatcactgcc 19017923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 24009569 - 24009713
Alignment:
Q  11 ttttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgttta 110  Q
    |||||||| ||||  |||| |||| | |||||||||||| ||  |||||||||| ||||||||| || ||||| || || |  || ||||||| |  |||    
T  24009569 ttttttggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttgccaactagccttgcaatcatta 24009668  T
Q  111 atcatttaaaatttcgtcctttgaccaacttaatcactgccacgt 155  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||    
T  24009669 atcatttaaaatttcatcctttgaccaacttaatcactgtcacgt 24009713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 25885416 - 25885356
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgct 80  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  25885416 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgct 25885356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 154
Target Start/End: Complemental strand, 31514721 - 31514577
Alignment:
Q  10 attttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgttt 109  Q
    |||| |||||||| |||||||||| |  ||| ||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  ||    
T  31514721 atttattggtttattgatgtgtttagcccttacaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattatt 31514622  T
Q  110 aatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||||||||||||| |   || |||||||||||||||||    
T  31514621 aatcatttaaaatttcgtccctctccccacttaatcactgccacg 31514577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 47999499 - 47999383
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||| ||||||| ||  |||||||||| |||| |||||||||||||  ||||||||||||| |||||| |||||||||||||||| |||||| |   ||     
T  47999499 cttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccctgcattatttaatcatttaaaatatcgtccctctcccc 47999400  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  47999399 acttaatcactgccacg 47999383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 32917281 - 32917396
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||||  |  |||||||||| |||| ||||||||||||| ||| || ||||| |||||||||||||||||||||||||||||||  |   ||     
T  32917281 cttgcaattaggaatcgtttaaaaattggtccctgtaatcgctaatcctgacagtttactcttgcattgtttaatcatttaaaatttcgtctctctcccc 32917380  T
Q  138 acttaatcactgccac 153  Q
    ||||||||||||||||    
T  32917381 acttaatcactgccac 32917396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 149
Target Start/End: Original strand, 35473652 - 35473763
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| ||||||||||||| |||||||  || ||||| | |  |||| |||||||||||| ||||||||||||    
T  35473652 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaaactagccttgtaatcattaaacatttaaaattttgtcctttgacca 35473751  T
Q  138 acttaatcactg 149  Q
    ||||||||||||    
T  35473752 acttaatcactg 35473763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 37578186 - 37578325
Alignment:
Q  11 ttttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgttta 110  Q
    ||||| |||||||  |||| |||| | |||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || |||| || |  |||    
T  37578186 tttttaggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttccaatcatta 37578285  T
Q  111 atcatttaaaatttcgtcctttgaccaacttaatcactgc 150  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  37578286 atcatttaaaatttcgttctttgaccaacttaatcactgc 37578325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 157
Target Start/End: Complemental strand, 1103851 - 1103749
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |||| |||| |||||||| || ||||  ||  |||||| |  ||||||||||||||||||||||||||||||||||| |||||||||||    
T  1103851 tttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctttgaccaacttattcactgccacg 1103752  T
Q  155 tca 157  Q
    |||    
T  1103751 tca 1103749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 33442984 - 33442854
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  ||||||||||||||||    
T  33442984 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatt 33442885  T
Q  124 tcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||| |   || |||||||||||||||||    
T  33442884 tcgtccctctccccacttaatcactgccacg 33442854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 129
Target Start/End: Original strand, 43758876 - 43758934
Alignment:
Q  71 tgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  43758876 tgtaatcgctaattctgacaatttactcttgcattgtttaatcatttaaaatttcgtcc 43758934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 1841796 - 1841747
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1841796 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 1841747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 14879308 - 14879259
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14879308 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 14879259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 40210370 - 40210507
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||  |||| |||| | |||||||||||  ||  ||||||| || ||| ||||| |||||||| || ||||  ||  |||||| |  |||||||||    
T  40210370 ggtttaaatatgtatttcatccttgcaattagtggtcgtttaaaatttggtctttgtattcgctaatccttgcaaactagacttgcaatcattaatcatt 40210469  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40210470 taaaatttcgtcctttgaccaacttaatcactgccacg 40210507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 4716468 - 4716608
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||| |||||||||| |  |||||||||||| |  ||||||||||| |||| |||||| |||||| ||| || |||| ||  ||| |  |||||| ||    
T  4716468 ggtttattgatgtgtttagcccttgcaattaggtggcatttaaaaattcgtccatgtaattgctaatcctgacattttaacccggcaattgttaatcgtt 4716567  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||| |||||| |||||| ||||||||||||||||||    
T  4716568 taaaatttggtccttggaccaaattaatcactgccacgtca 4716608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 35152364 - 35152476
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||  ||  |||||||||| |||| | ||||||||||| ||| |||||||||||| ||||||||||||||||||||||| |||| |   ||     
T  35152364 cttgcaattagaggtcgtttaaaaattggtccctataatcgctaatactgccaatttacccttacattgtttaatcatttaaaattttgtccctctcccc 35152463  T
Q  138 acttaatcactgc 150  Q
    |||||||||||||    
T  35152464 acttaatcactgc 35152476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 46282195 - 46282251
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  46282195 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 46282251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 49093165 - 49093221
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  49093165 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 49093221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 49093789 - 49093733
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  49093789 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 49093733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 17661873 - 17661990
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| ||||| ||| |||||||| || ||||  || | ||||| |  ||||||||||||||||||||||||||||||    
T  17661873 cttgcaattaggggtcgtttaaaaattggtcct-gtattcgctaatccttgcaaactagcattgcaatcattaatcatttaaaatttcgtcctttgacca 17661971  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||| ||||||||||    
T  17661972 acttaatca-tgccacgtca 17661990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 17691228 - 17691331
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||| |||||| ||| ||| |||| ||  |||||||||| |||| ||||||||||||| || |||| |||  ||||||||||||||||||||||||||||    
T  17691228 atgtatttcgtccttacaagtaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaatttc 17691327  T
Q  126 gtcc 129  Q
    ||||    
T  17691328 gtcc 17691331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 28011401 - 28011500
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |||| |||||| |||||| ||||||||||| ||||||| |  |||||||||||||||||||||| |   || |||||||||||||||||    
T  28011401 tttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 28011500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 157
Target Start/End: Complemental strand, 32917679 - 32917548
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||| |||| |||||||||||| | ||  |||||||||| |||  |||| ||| |||| || ||||  || ||||||| |  ||||||||||||||||||    
T  32917679 atgtatttcattcttgcaattaagggtcgtttaaaaattggtctctgtattcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 32917580  T
Q  126 gtcctttgaccaacttaatcactgccacgtca 157  Q
     |||||||||||||||||||| ||||||||||    
T  32917579 atcctttgaccaacttaatcattgccacgtca 32917548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 34849032 - 34849151
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| |||||||| || |||| |||||||||||   ||||||||||||||||||||||| |   ||     
T  34849032 cttgcaattaggggtcttttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatttaaaatttcgtccctctcccc 34849131  T
Q  138 acttaatcactgccacgtca 157  Q
     |||||||||||||||||||    
T  34849132 tcttaatcactgccacgtca 34849151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 34850472 - 34850353
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| |||||||| || |||| |||||||||||   ||||||||||||||||||| ||| |   ||     
T  34850472 cttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatttaaaatttcatccctctcccc 34850373  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  34850372 acttaatcactgccacgtca 34850353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 43759229 - 43759118
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||  |||| |||| |||||||| || ||||  || ||||||| | || ||||||||||||||||||||||||||||    
T  43759229 cttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagccttgcaatcttcaatcatttaaaatttcgtcctttgacca 43759130  T
Q  138 acttaatcactg 149  Q
    |||||| |||||    
T  43759129 acttaaccactg 43759118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 47999144 - 47999263
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||||  |  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||| ||||||||||||    
T  47999144 cttgcaattagggatcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgacca 47999243  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||| | ||||||||||    
T  47999244 acttaattattgccacgtca 47999263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 1841497 - 1841599
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |||   |||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||  |   || ||||||||||||||| |    
T  1841497 tttaaaaattggtctccgtaatcgctaatcctgacaatttacccttacattgtttaatcatttaaaatttcgtcactctccccacttaatcactgccatg 1841596  T
Q  155 tca 157  Q
    |||    
T  1841597 tca 1841599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 4960899 - 4960801
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    |||||||||| ||||  ||| |||||||| || ||||  || ||||||| |  ||||||||||||||||||||||||||| ||||||||||||||||||    
T  4960899 tttaaaaattggtccccgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgatcaacttaatcactgccac 4960801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 24905564 - 24905427
Alignment:
Q  16 tggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcat 115  Q
    ||||||||||||||| || || |||||||||| |  |  |||||||||| ||||| ||||| |||||| ||||||||||| || |||| |  ||||||||    
T  24905564 tggtttaatgatgtgattagtccttgcaattatggatcgtttaaaaattcgtcct-gtaattgctaatcctggcaatttagccctgcaattgttaatcat 24905466  T
Q  116 ttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||||||| |   || |||||||||||||||||    
T  24905465 ttaaaatttcgtccctctccccacttaatcactgccacg 24905427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 32133343 - 32133218
Alignment:
Q  26 atgtgtttcgttcttgcaattaggc-gttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaattt 124  Q
    ||||||||| ||| ||||||||||  ||  |||||||||| ||||||||||||| ||||  |||||| ||| ||| |||  |||||||||||||||||||    
T  32133343 atgtgtttcattcctgcaattagggagtcctttaaaaattcgtccttgtaatcgttaatcttggcaaattagcctcgcaaagtttaatcatttaaaattt 32133244  T
Q  125 cgtcctttgaccaacttaatcactgcc 151  Q
    ||||| |||||| ||||||| ||||||    
T  32133243 cgtcc-ttgacccacttaattactgcc 32133218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 52134075 - 52134205
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  |||||||||||||| |||||||||||| |||| |||||| |||||| |||||| |||| || || | |  |||||| |||||||||    
T  52134075 tgatgtgtttagcccttgcaattaggcggtatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgtaattgttaatcgtttaaaatt 52134174  T
Q  124 tcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||| |   || |||||||||||||||||    
T  52134175 tcgtccctctccccacttaatcactgccacg 52134205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 46282769 - 46282713
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||    
T  46282769 taatcactgccacatcatcaaattagcaaaatggcatgggaattgacaaaaataccc 46282713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 50062327 - 50062383
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||    
T  50062327 taatcactgccacgtcatcaaattagcaaaatgacatgggaattgacaaaaataccc 50062383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 13295258 - 13295317
Alignment:
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    |||||||||||||||||||||||||||||||||| ||||| | | |||||||||||||||    
T  13295258 ttaatcactgccacgtcatcaaattagcaaaatgacatggaaatagacaaaaataccctc 13295317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 17692592 - 17692501
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||||| ||  |||||||||  |||| ||| ||||||||| || |||| ||| | |||||||||||||||||||||||||||||||    
T  17692592 cttgcaattaggggtcgtttaaaaatcggtccctgttatcgctaatccttgcaaattagctttgcattgtttaatcatttaaaatttcgtcc 17692501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 23209383 - 23209501
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  ||||||||||| | ||| || ||| |||| || ||||  || ||||||| |  ||||||||||||||||| || |||||||||    
T  23209383 cttgcaattagg-gtcgtttaaaaattaatacttatattcgttaatccttgcaaactagccttgcaatcattaatcatttaaaattttgttctttgacca 23209481  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  23209482 acttaatcactgccacgtca 23209501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 149
Target Start/End: Original strand, 36694303 - 36694414
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||  |||| |||||||| || ||||  ||  |||||| |  ||||||||||||||||||| ||||||||||    
T  36694303 cttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgccctttgacca 36694402  T
Q  138 acttaatcactg 149  Q
    ||||||||||||    
T  36694403 acttaatcactg 36694414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 149
Target Start/End: Original strand, 36710404 - 36710515
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||  |||| |||||||| || ||||  ||  |||||| |  ||||||||||||||||||| ||||||||||    
T  36710404 cttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgccctttgacca 36710503  T
Q  138 acttaatcactg 149  Q
    ||||||||||||    
T  36710504 acttaatcactg 36710515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 205
Target Start/End: Complemental strand, 5735101 - 5734951
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| || | |||| |||||||| || ||||  || |||| || |  |||||||||||||||||||||| |   || | ||||| |||| ||||    
T  5735101 tttaaaaattggttcatgtattcgctaatccttgcaaactagccttacaatcattaatcatttaaaatttcgtccctgagcccagttaattactgtcacg 5735002  T
Q  155 tcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatc 205  Q
    ||||||||||| |||||||||||| || | ||||||||| ||||| |||||    
T  5735001 tcatcaaattaacaaaatggcatgagaatagacaaaaatgccctcatcatc 5734951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 4716864 - 4716728
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||| |||||||||| |  |||||||||||||  |||||||||||| |||| || ||| |||||| |||||| |||| || |||| |  |||||||||    
T  4716864 ggtttattgatgtgtttagcccttgcaattaggcaatatttaaaaatttgtcc-tgaaattgctaatcctggcattttaaccctgcaattgttaatcatt 4716766  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    ||||||||||||  |   || |||||||||||||||||    
T  4716765 taaaatttcgtctctctccccacttaatcactgccacg 4716728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 7821291 - 7821242
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  7821291 ttaatcatttataatttcgtcctttgaccaacttaatcactgtcacgtca 7821242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 19017720 - 19017769
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||    
T  19017720 ttaatcatttaaaatttcgttcgttgaccaacttaatcactgccacgtca 19017769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 35152680 - 35152639
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 149  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  35152680 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 35152639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 7371592 - 7371528
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaatt 84  Q
    |||| |||||||||||| ||||||||||| ||| |||||||||||||||  ||||||||||||||    
T  7371592 ttaacgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtctctgtaatcgctaatt 7371528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 50062924 - 50062868
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||| |||||||||||||||||||||||||||| || | |||||||||||||    
T  50062924 taatcactgtcacgtcatcaaattagcaaaatggcatgagaattgacaaaaataccc 50062868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 30326746 - 30326696
Alignment:
Q  193 taccctcgtcatccattcgtaaaatgacatttttacccatgacttcatctt 243  Q
    |||||||||||||||||| | |||||||||||||||||||| |||||||||    
T  30326746 taccctcgtcatccattcatgaaatgacatttttacccatgtcttcatctt 30326696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 41099123 - 41099029
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactg 149  Q
    |||||||||| |||  |||| |||||||| || ||||  || |||| || |  ||||||||||||||||||||| ||||||||||||||||||||    
T  41099123 tttaaaaattggtctctgtattcgctaatccttgcaaactaaccttacaatcattaatcatttaaaatttcgtcatttgaccaacttaatcactg 41099029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 19322930 - 19323032
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| || | |||| |||||||| || ||||  || | ||||| |  |||||||||||||| ||||| |||||||||||||||||||| ||| |    
T  19322930 tttaaaaattcgttcatgtattcgctaatccttgcaaactaactttgcaatcattaatcatttaaaagttcgttctttgaccaacttaatcactaccatg 19323029  T
Q  155 tca 157  Q
    |||    
T  19323030 tca 19323032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 157
Target Start/End: Complemental strand, 19323282 - 19323180
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| || | |||| |||||||| || ||||  || | ||||| |  |||||||||||||| ||||| |||||||||||||||||||| ||| |    
T  19323282 tttaaaaattcgttcatgtattcgctaatccttgcaaactaactttgcaatcattaatcatttaaaagttcgttctttgaccaacttaatcactaccatg 19323183  T
Q  155 tca 157  Q
    |||    
T  19323182 tca 19323180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 150
Target Start/End: Complemental strand, 40772809 - 40772767
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgc 150  Q
    ||||| |||| ||||||||||||||||||||||||||||||||    
T  40772809 ttaattatttcaaatttcgtcctttgaccaacttaatcactgc 40772767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 7231586 - 7231541
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    ||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  7231586 ttaattatttaaaattttgtcatttgaccaacttaatcactgccac 7231541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #116
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 157
Target Start/End: Original strand, 21444629 - 21444734
Alignment:
Q  52 ttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgcc 151  Q
    ||||||||||||| ||||||||| ||  ||||| ||||| |||| |||  ||   |||||||| |||||||||||||| |   || ||||||||||||||    
T  21444629 ttatttaaaaattggtccttgtattctttaattttggcattttatcctatcaaaatttaatcacttaaaatttcgtccatctccccacttaatcactgcc 21444728  T
Q  152 acgtca 157  Q
    ||||||    
T  21444729 acgtca 21444734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #117
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 42248858 - 42248759
Alignment:
Q  58 aaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||| |||  |||| ||||||||||| ||||  ||  |||||| |  ||||| ||||||||||||| | ||||||||||||||||| || |||||||    
T  42248858 aaaaattggtctctgtattcgctaattcttgcaaactagtcttgcaattattaattatttaaaatttcgacatttgaccaacttaatcattgtcacgtca 42248759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #118
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 10303977 - 10304059
Alignment:
Q  71 tgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    |||| ||| |||| |||||||||| ||||| ||   ||||||||||||||||||||||| |   || ||||||||||||||||    
T  10303977 tgtattcgttaatcctggcaatttgcccttccaaaatttaatcatttaaaatttcgtccctctccccacttaatcactgccac 10304059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #119
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 157
Target Start/End: Complemental strand, 13300310 - 13300192
Alignment:
Q  39 ttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaa 138  Q
    ||||||||||||||  |||||||||| |||  |||| || ||||| || |||| |||| ||| |||| |||||| | |||||| ||  |||||  ||| |    
T  13300310 ttgcaattaggcgtcgtttaaaaattggtctctgtattcactaatccttgcaaattactcttacattctttaataacttaaaaattgatccttcaaccca 13300211  T
Q  139 cttaatcactgccacgtca 157  Q
    |||||||| ||||||||||    
T  13300210 cttaatcagtgccacgtca 13300192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #120
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 31197059 - 31197200
Alignment:
Q  11 ttttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgttta 110  Q
    |||||||| ||||  |||| |||| | | |||||||||| || ||||||||||| |||  |||| ||| |||| |||| || |||||||||||     ||    
T  31197059 ttttttggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaatttgtctctgtattcgttaatcctggaaaattacccttgca-----ta 31197153  T
Q  111 atcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||||| ||| |   || | ||||||||||||||||||    
T  31197154 atcatttaaaatttcatccctcatcctagttaatcactgccacgtca 31197200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #121
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 44522156 - 44522249
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| | ||||||||||  | ||||||||||| | || |||||||| |||| || |||| ||| ||||| |  ||||||||||||||    
T  44522156 atgtgtttcgtccctgcaattagggatcatttaaaaattggaccctgtaatcgttaatcctagcaaattatccttgtaaagtttaatcatttaa 44522249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 148)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 10 - 250
Target Start/End: Original strand, 27068903 - 27069143
Alignment:
Q  10 attttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgttt 109  Q
    |||||| || |||| |||||||||||| ||||||||||||| | |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  27068903 atttttaggcttaaggatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgttt 27069002  T
Q  110 aatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccatt 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27069003 aatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatccatt 27069102  T
Q  210 cgtaaaatgacatttttacccatgacttcatcttcatctca 250  Q
    ||| |||||||||||||| || || |||||||||| |||||    
T  27069103 cgtgaaatgacatttttatccctgtcttcatcttcttctca 27069143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 15 - 250
Target Start/End: Complemental strand, 10408317 - 10408082
Alignment:
Q  15 ttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatca 114  Q
    |||| |||||| |||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  10408317 ttggcttaatgttgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 10408218  T
Q  115 tttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaa 214  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||| || |||||||||||||||||||||||||||||| |    
T  10408217 tttaaaatttcgtcctttgaccaacttaatcactgccacatcatcaaattagcaaaatgatatgagaatggacaaaaataccctcgtcatccattcgtga 10408118  T
Q  215 aatgacatttttacccatgacttcatcttcatctca 250  Q
    |||||||||||||||| || |||||||||| |||||    
T  10408117 aatgacatttttacccctgtcttcatcttcttctca 10408082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 20 - 250
Target Start/End: Original strand, 27891587 - 27891817
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||| | |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27891587 ttaatgatgtgtttcgtccttgcaattagacattatttaaaaattagtccctgtaatcgctaattttggcaatttacccttgcattgtttaatcatttaa 27891686  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||| ||||||    
T  27891687 aatttcgtcctttgaccaacttaatcactgtcacgtcatcaaattagcaaaatgacatgggaatggacaaaaatatcctcgtcatccattcgtgaaatga 27891786  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    ||||||||||  || |||||||||| |||||    
T  27891787 catttttacctctgtcttcatcttcttctca 27891817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 11 - 250
Target Start/End: Original strand, 52573222 - 52573461
Alignment:
Q  11 ttttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgttta 110  Q
    ||||| || |||||||||||||||||  |||||||||||||| |||||||||||||| | ||||||||||||| |||||||||||| ||| |||||||||    
T  52573222 tttttaggcttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtacctgtaatcgctaatcctggcaatttactcttacattgttta 52573321  T
Q  111 atcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattc 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  52573322 atcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaataccctcgtcatccattc 52573421  T
Q  211 gtaaaatgacatttttacccatgacttcatcttcatctca 250  Q
     | ||||||||||||||||| || |||||||||| |||||    
T  52573422 atgaaatgacatttttacccctgtcttcatcttcttctca 52573461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 54858563 - 54858773
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  54858563 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 54858662  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||| |||||||||||| ||||||    
T  54858663 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaacagacaaaaataccctcatcatccattcgtgaaatga 54858762  T
Q  220 catttttaccc 230  Q
    |||||||||||    
T  54858763 catttttaccc 54858773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 45463500 - 45463266
Alignment:
Q  16 tggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcat 115  Q
    |||||||||||| |||||||| ||||||||||||||| |||||||||||||||| |||||| |||||| |||||||| ||||||||||||||||||||||    
T  45463500 tggtttaatgatatgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatctacccttgcattgtttaatcat 45463401  T
Q  116 ttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaa 215  Q
    ||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||    
T  45463400 ttaaaattttgttctttgaccaacttaatcactaccacgtcatcaaattagcaaaatggcatgggaatggacaaaaacaccctcgtcatccattcgtgaa 45463301  T
Q  216 atgacatttttacccatgacttcatcttcatctca 250  Q
    ||||||||||||||| || ||| |||||| |||||    
T  45463300 atgacatttttacccctgtctttatcttcttctca 45463266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 50504248 - 50504018
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||  |||||||| |||| | |||||||||||||||||||||||||||||||||    
T  50504248 ttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcgttaatccaggcaatttacccttgcattgtttaatcatttaa 50504149  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    |||||||||||||||| |||||||||||| ||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| | ||||||    
T  50504148 aatttcgtcctttgacaaacttaatcactcccaagtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcgtcatccattcttgaaatga 50504049  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    |||||||||||||| |||||||||| |||||    
T  50504048 catttttacccatgtcttcatcttcttctca 50504018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 20 - 250
Target Start/End: Original strand, 39700912 - 39701142
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    |||||| |||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| ||| |||| ||||||| |||| |||||| ||||||    
T  39700912 ttaatggtgtgtttcattcttgcaattaggcgttatttaaaaattaatccatgtaatcgctaatcctgacaatatacccttacattatttaattatttaa 39701011  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    |||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  39701012 aatttcatcctttgaccaacttaatcactctcacgtcatcaaattagcaaaatggcatgggaatggacaaaaacaccctcgtcatccattcgtgaaatga 39701111  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    ||||||||||| || |||||||||| |||||    
T  39701112 catttttacccctgtcttcatcttcttctca 39701142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 19 - 250
Target Start/End: Complemental strand, 39667200 - 39666969
Alignment:
Q  19 tttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcattta 118  Q
    |||||||||||||||||| |||| ||||| | || ||||||||||| |||| |||||||| |||| |||| || ||||||||||||||||||||||||||    
T  39667200 tttaatgatgtgtttcgtccttgtaattacgggtcatttaaaaattggtccctgtaatcgttaatcctggtaaattacccttgcattgtttaatcattta 39667101  T
Q  119 aaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatg 218  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||| |||||    
T  39667100 aaatttcgtcttttgaccaacttaatcaccgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaataccatcgtcatccattcgtgaaatg 39667001  T
Q  219 acatttttacccatgacttcatcttcatctca 250  Q
    |||||||||||| || |||||||||| |||||    
T  39667000 acatttttacccttgtcttcatcttcttctca 39666969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 54858983 - 54858801
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||    
T  54858983 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaa 54858884  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  54858883 aatttcgtcctttgaccaacttaatcactaccaagtcatcaaattagcaaaatggcatgtgaatggacaaaaataccctcgtc 54858801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 3032585 - 3032767
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3032585 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 3032684  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||| |||||||||||||||||| |||| || ||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  3032685 aatttcgtcatttgaccaacttaatcaccgccaagttatcaaattagcaaaatggcataggaatggacaaaaatacactcgtc 3032767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 27069333 - 27069151
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||    
T  27069333 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcatttaa 27069234  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||| ||||||||| |||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27069233 aatttcgtcttttgaccaatttaatcaccgccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtc 27069151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 45463076 - 45463258
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45463076 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 45463175  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||| ||||||||||||||||||| ||| ||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  45463176 aatttcgtcatttgaccaacttaatcactaccaagtcatcaaattagcaaaatagcatgggaatggacaaaaataccctcgtc 45463258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 28 - 250
Target Start/End: Complemental strand, 22718354 - 22718132
Alignment:
Q  28 gtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgt 127  Q
    ||||||||| |||  |||||||||| |||||||||||| ||  |||||| | |||| |||||||||||| ||||||||||||||||||||||||||||||    
T  22718354 gtgtttcgtccttttaattaggcgtcatttaaaaattactctctgtaattgttaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgt 22718255  T
Q  128 cctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatgacattttta 227  Q
    | ||||||||| |||||||| | ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  22718254 catttgaccaatttaatcaccgacacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcgtcatccattcgtgaaatgacattttta 22718155  T
Q  228 cccatgacttcatcttcatctca 250  Q
    ||| || |||||||||| |||||    
T  22718154 cccctgtcttcatcttcttctca 22718132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 28 - 250
Target Start/End: Original strand, 22986862 - 22987084
Alignment:
Q  28 gtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgt 127  Q
    ||||||||| |||  |||||||||| |||||||||||| ||  |||||| | |||| |||||||||||| ||||||||||||||||||||||||||||||    
T  22986862 gtgtttcgtccttttaattaggcgtcatttaaaaattactctctgtaattgttaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgt 22986961  T
Q  128 cctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatgacattttta 227  Q
    | ||||||||| |||||||| | ||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||| ||||||||||||||    
T  22986962 catttgaccaatttaatcaccgacacgtcatcaaattagcaaaatgacatgggaatagacaaaaataccctcgtcatccattcgtgaaatgacattttta 22987061  T
Q  228 cccatgacttcatcttcatctca 250  Q
    ||| || |||||||||| |||||    
T  22987062 cccctgtcttcatcttcttctca 22987084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 50503828 - 50504010
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| || |||||||||| | |||||||||| ||||| |||||||| ||||  | ||||||||||||||||||||||||||||||||    
T  50503828 ttaatgatgtgtttcgtcctcgcaattaggcatcatttaaaaatcagtccatgtaatcgttaatcttagcaatttacccttgcattgtttaatcatttaa 50503927  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  50503928 aattccgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtc 50504010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 85 - 250
Target Start/End: Original strand, 51859475 - 51859640
Alignment:
Q  85 ctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtg 184  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||    
T  51859475 ctggcaatttacccttgcattatttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacatcatcaaattagcaaaatggcatgagaatg 51859574  T
Q  185 gacaaaaataccctcgtcatccattcgtaaaatgacatttttacccatgacttcatcttcatctca 250  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||| |||||    
T  51859575 gacaaaaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttcttctca 51859640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 20 - 199
Target Start/End: Original strand, 10407892 - 10408071
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| |||||||||||| || |||||||||||| ||| ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  10407892 ttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaattactccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 10407991  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||| | |||||||||||||||||    
T  10407992 aatttcgtcctttgatcaacttaatcactaccaagtcatcaaattagcaaaatggcatggaaatggacaaaaataccctc 10408071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 52573651 - 52573469
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||| ||||| || |||||||||| |||||||||||||||||||||    
T  52573651 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcctagcaatttaccattgcattgtttaatcatttaa 52573552  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||    
T  52573551 aattccgtcctttgatcaatttaatcactgccacgtcatcaaattagcaatatggcatgagaatggacaaaaataccctcgtc 52573469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 11523949 - 11524134
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||  |||||||| |||| |||||||| |||||||||||||||||||||||    
T  11523949 ggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgttaatcctggcaatatacccttgcattgtttaatcatt 11524048  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||||||||| |||||||||||||||||   ||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  11524049 taaaatttcgtcatttgaccaacttaatcatcaccaagtcatcaaattagcaaaatggcatgggaatagacaaaaataccctcgtc 11524134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 39701335 - 39701150
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||  |||||||| ||||  || ||||||||| ||||||||||||||||||    
T  39701335 ggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctatgtaatcgttaatcttgacaatttacctttgcattgtttaatcatt 39701236  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| | |||||| ||||||||||||||||||||    
T  39701235 taaaatttcgtcatttgaccaacttaatcactgccaagtcatcaaattagcaaaatagtatgggaatggacaaaaataccctcgtc 39701150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 51859829 - 51859658
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||| ||| ||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||    
T  51859829 ttaatgatgtgtttcgtccttgcaattagacgtaatttaaaaattagtctttgtaatcgctaatcctggcaatttatccttgtattgtttaatcatttaa 51859730  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaa 191  Q
    ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||    
T  51859729 aatttcgtcctttgatcaacttaatcactcccaagtcatcaaattagcaaaatggcatgggaatggacaaaa 51859658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 60 - 250
Target Start/End: Complemental strand, 9731595 - 9731405
Alignment:
Q  60 aaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatc 159  Q
    |||||||| | ||||||||||||| ||| ||||||| ||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  9731595 aaattagttcctgtaatcgctaatcctgacaatttatccttgtattgtttaatcatttaaaatttcgttctttgactaacttaatcactgccacgtcatc 9731496  T
Q  160 aaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatgacatttttacccatgacttcatcttcatctca 250  Q
    |||||||||||||||||||||| || ||||||||| |||||||||| |||||| ||||||||||||||||| || |||||||||| |||||    
T  9731495 aaattagcaaaatggcatgggaatgaacaaaaatatcctcgtcatctattcgtgaaatgacatttttacccttgtcttcatcttcttctca 9731405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 15 - 194
Target Start/End: Complemental strand, 5818203 - 5818024
Alignment:
Q  15 ttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatca 114  Q
    ||||||||||||||||||||||  ||| |||||||||| |||||||||||||||| |||||||| |||| ||| ||||||||||||||||||||||||||    
T  5818203 ttggtttaatgatgtgtttcgtctttgtaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctgtcaatttacccttgcattgtttaatca 5818104  T
Q  115 tttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaata 194  Q
    ||||||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||||||| | ||||||||||    
T  5818103 tttaaaatttcatcctttgaccaacttaatcactgtcaagtcttcaaattagcaaaatggcatgggaatagacaaaaata 5818024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 22717939 - 22718124
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||||||||||||||| ||| ||||||| ||| |||||||||||||||| ||||||||||||| ||| |||| ||||||||| |||||||||||||    
T  22717939 ggtttaatgatgtgtttcgtccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaatatacccttgctttgtttaatcatt 22718038  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||| ||  || | ||||||||||||||||||    
T  22718039 taaaatttcgtcctttgaccaacttaatcaccaccaagtcatcaaattagcaaaatggtataagaatagacaaaaataccctcgtc 22718124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 22987274 - 22987092
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||| ||||||| ||| |||||||||||||||| ||||||||||||| ||| |||| ||||||||| ||||||||||||||||    
T  22987274 ttaatgatgtgtttcgtccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaatatacccttgctttgtttaatcatttaa 22987175  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||||||||||||||||||||||  ||| ||||||||||||||||||||| ||  || | ||||||||||||||||||    
T  22987174 aatttcgtcctttgaccaacttaatcaccaccaagtcatcaaattagcaaaatggtataagaatagacaaaaataccctcgtc 22987092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 39666773 - 39666961
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatt------tacccttgcattgtttaatc 113  Q
    |||||||||||||||||  ||| ||||||  || |||||||||||||||  ||||||||||||| |||||| ||      |||| |||||||||||||||    
T  39666773 ttaatgatgtgtttcgtctttgtaattagaagtcatttaaaaattagtcaatgtaatcgctaatcctggcatttaaaaattacctttgcattgtttaatc 39666872  T
Q  114 atttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||||||||||||||| || ||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39666873 atttaaaatttcgtccttcgagcaacttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtc 39666961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 27149418 - 27149298
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||| ||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||    
T  27149418 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaa-ttagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcatttaa 27149320  T
Q  120 aatttcgtcctttgaccaactt 141  Q
    ||||||||||||||||||||||    
T  27149319 aatttcgtcctttgaccaactt 27149298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 22923149 - 22923287
Alignment:
Q  28 gtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgt 127  Q
    ||||||||| |||  |||||| ||| |||||||||||||||  |||||||| |||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  22923149 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgt 22923248  T
Q  128 cctttgaccaacttaatcactgccacgtcatcaaattag 166  Q
    | ||||||||| |||||||||| ||||||||||||||||    
T  22923249 catttgaccaatttaatcactgacacgtcatcaaattag 22923287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 22927802 - 22927940
Alignment:
Q  28 gtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgt 127  Q
    ||||||||| |||  |||||| ||| |||||||||||||||  |||||||| |||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  22927802 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgt 22927901  T
Q  128 cctttgaccaacttaatcactgccacgtcatcaaattag 166  Q
    | ||||||||| |||||||||| ||||||||||||||||    
T  22927902 catttgaccaatttaatcactgacacgtcatcaaattag 22927940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 22984081 - 22984219
Alignment:
Q  28 gtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgt 127  Q
    ||||||||| |||  |||||| ||| |||||||||||||||  |||||||| |||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  22984081 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgt 22984180  T
Q  128 cctttgaccaacttaatcactgccacgtcatcaaattag 166  Q
    | ||||||||| |||||||||| ||||||||||||||||    
T  22984181 catttgaccaatttaatcactgacacgtcatcaaattag 22984219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 22997669 - 22997807
Alignment:
Q  28 gtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgt 127  Q
    ||||||||| |||  |||||| ||| |||||||||||||||  |||||||| |||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  22997669 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgt 22997768  T
Q  128 cctttgaccaacttaatcactgccacgtcatcaaattag 166  Q
    | ||||||||| |||||||||| ||||||||||||||||    
T  22997769 catttgaccaatttaatcactgacacgtcatcaaattag 22997807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 40 - 206
Target Start/End: Complemental strand, 32063741 - 32063575
Alignment:
Q  40 tgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaac 139  Q
    |||||||||| || ||||||||||| ||   |||||||| |||| ||||||| |||||||||||  |||||||||||||||||| ||||| |  ||  ||    
T  32063741 tgcaattaggggtcatttaaaaattggtttctgtaatcgttaatactggcaaattacccttgcaaagtttaatcatttaaaattccgtccctgcacgcac 32063642  T
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatcc 206  Q
    ||||| | ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||    
T  32063641 ttaattattgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaataccctcatcatcc 32063575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 50751922 - 50751745
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    |||||||||||||||   | |||||||||||||  |||||||||| ||||| |||||||||||| ||| ||| ||| |||||||||||||||||||||||    
T  50751922 ttaatgatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtcct-gtaatcgctaatcctgacaaattaaccttgcattgtttaatcatttaa 50751824  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccct 198  Q
    || ||||||| |  ||| ||||||  |||||||| ||||||||||| |||||| |||||||| ||||||||||| ||||    
T  50751823 aaattcgtccctgaacccacttaaagactgccacatcatcaaattaacaaaatagcatgggaatggacaaaaatgccct 50751745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 16605605 - 16605742
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| |||||||||||| || |||||||||||||||| ||||||||  ||  ||| |||||||||||||||||| ||||||||||||    
T  16605605 ttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgtcaaacctgccaatttacccttgcattgattaatcatttaa 16605704  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||||| |   || ||||||||||||||||||||    
T  16605705 aatttcgtccctccccccacttaatcactgccacgtca 16605742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 197
Target Start/End: Complemental strand, 55867519 - 55867362
Alignment:
Q  40 tgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaac 139  Q
    |||||||||| ||  |||||||||| |||| |||||||| |||| || ||||  |||||||||||||||||||||||||||||||||||| |   || |     
T  55867519 tgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatccttgcaaactacccttgcattgtttaatcatttaaaatttcgtccctattcccag 55867420  T
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||||||||||||||||||||||||||||| ||| ||| | |||||||||||||    
T  55867419 ttaatcactgccacgtcatcaaattagcaaaatgacattggaattgacaaaaataccc 55867362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 9400522 - 9400659
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || |||||||||||| || ||||||||||| |||| |||||| |||||| ||||||||||| ||||||| |  ||||||||||||    
T  9400522 ttaatgatgtgattagtccttgcaattaggtgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 9400621  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||| |||||| ||||||||||||||||| |||||||    
T  9400622 aatttggtccttggaccaacttaatcactgtcacgtca 9400659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 50750887 - 50751035
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    ||||||| ||||||||||   | |||||||||||||  |||||||||| |||| ||||||||||||| ||||||| ||| ||||||||||||||||||||    
T  50750887 ggtttaaggatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcatt 50750986  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaatta 165  Q
    ||||| ||||||  |  ||| ||||||| ||||||||||||||||||||    
T  50750987 taaaaattcgtcactgaacccacttaatgactgccacgtcatcaaatta 50751035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 4982723 - 4982866
Alignment:
Q  14 tttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatc 113  Q
    ||||| ||||||||||| || || ||||||||||| ||| ||||||||||| |||| |||||| ||||||  |||||||||| ||||||| |  ||||||    
T  4982723 tttggcttaatgatgtgattagtccttgcaattagacgtaatttaaaaattcgtccatgtaattgctaatcttggcaatttagccttgcaattgttaatc 4982822  T
Q  114 atttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||| |||||| ||||||||||||||||||| |||||    
T  4982823 atttaaaatttggtccttggaccaacttaatcactgcctcgtca 4982866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 206
Target Start/End: Original strand, 30641529 - 30641706
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| | | |||||||| || ||||||||||| |||  |||||||| |||| || |||| ||||| || ||  ||||||||||||||||||||    
T  30641529 atgtgtttcgtccctccaattaggggtcatttaaaaatttgtc--tgtaatcgttaatccttgcaaattaccattacaaagtttaatcatttaaaatttc 30641626  T
Q  126 gtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatcc 206  Q
    |||| |  |||| |||||| |||| ||||||||||||||||||||||| ||||||| ||||||||| ||||||| ||||||    
T  30641627 gtccctacacca-cttaattactgtcacgtcatcaaattagcaaaatgtcatgggaatggacaaaattaccctcatcatcc 30641706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 26 - 206
Target Start/End: Complemental strand, 40317082 - 40316902
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| | |||| |||||  ||||||||||||| | |  |||||||| |||| |||| || |||||||| ||  |||||||| ||||||||| |    
T  40317082 atgtgtttcgtccctgcagttagggcttatttaaaaattggcctctgtaatcgttaatcctggaaaattaccctttcaaagtttaatcctttaaaattcc 40316983  T
Q  126 gtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatcc 206  Q
    |||| |  ||| ||||||| ||| |||| ||||||||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  40316982 gtccctacacctacttaattactaccacatcatcaaattagcaaaatgacatgggaatggacaaaaataccctcatcatcc 40316902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 26 - 206
Target Start/End: Complemental strand, 40327156 - 40326976
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| | |||| |||||  ||||||||||||| | |  |||||||| |||| |||| || |||||||| ||  |||||||| ||||||||| |    
T  40327156 atgtgtttcgtccctgcagttagggcttatttaaaaattggcctctgtaatcgttaatcctggaaaattaccctttcaaagtttaatcctttaaaattcc 40327057  T
Q  126 gtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatcc 206  Q
    |||| |  ||| ||||||| ||| |||| ||||||||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  40327056 gtccctacacctacttaattactaccacatcatcaaattagcaaaatgacatgggaatggacaaaaataccctcatcatcc 40326976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 14801757 - 14801876
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| ||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||| |   ||     
T  14801757 cttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaatcatttaaaatttcgtccctctcccc 14801856  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  14801857 acttaatcactgccacgtca 14801876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 34765787 - 34765668
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| || | ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |   ||     
T  34765787 cttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacctttgcattgtttaatcatttaaaatttcgtccctctcccc 34765688  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  34765687 acttaatcactgccacgtca 34765668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 38 - 128
Target Start/End: Original strand, 37248257 - 37248347
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 128  Q
    |||||||||||| ||  |||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37248257 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 37248347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 5368968 - 5369084
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||||  |  |||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||| |   ||     
T  5368968 cttgcaattagggatcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaattttgtccctctcccc 5369067  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  5369068 acttaatcactgccacg 5369084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 23613330 - 23613446
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||| |   ||     
T  23613330 cttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctcccc 23613429  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  23613430 acttaatcactgccacg 23613446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 24711132 - 24711248
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |   ||     
T  24711132 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccgttgcattgtttaatcatttaaaatttcgtccctctcccc 24711231  T
Q  138 acttaatcactgccacg 154  Q
    ||||||||||| |||||    
T  24711232 acttaatcactaccacg 24711248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 33247295 - 33247413
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| || ||||||||||| |||| |||||| |||||| ||||||||||| ||||||| |  |||||||||| |||||| |||||| |||||    
T  33247295 cttgcaattaggtgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcattt-aaatttggtccttggacca 33247393  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  33247394 acttaatcactgccacgtca 33247413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 44967445 - 44967330
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||  ||  |||||||||| |||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |   ||     
T  44967445 cttgcaattagaggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctcccc 44967346  T
Q  138 acttaatcactgccac 153  Q
    ||||||||||||||||    
T  44967345 acttaatcactgccac 44967330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 9144768 - 9144906
Alignment:
Q  19 tttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcattta 118  Q
    |||| |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||||||||    
T  9144768 tttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcattta 9144867  T
Q  119 aaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||| |||||| |||||| ||||||||||||||||||    
T  9144868 aaatttggtccttggaccaaattaatcactgccacgtca 9144906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 157
Target Start/End: Complemental strand, 38012560 - 38012427
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||| |||||||||    
T  38012560 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 38012461  T
Q  124 tcgtcctttgaccaacttaatcactgccacgtca 157  Q
    | ||||||||||||| ||||||||||||||||||    
T  38012460 tggtcctttgaccaaattaatcactgccacgtca 38012427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 197
Target Start/End: Complemental strand, 11448148 - 11447977
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||| |||||| | || ||||||| ||  ||||||||||  ||  ||||||||||||| || |||| |||||||||||||||||||||||||||||||||    
T  11448148 atgtatttcgtccctgtaattaggggtcgtttaaaaattgatctctgtaatcgctaatccttgcaaattacccttgcattgtttaatcatttaaaatttc 11448049  T
Q  126 gtc-ctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||| || |  || | |||||||||||||| ||||||||||| ||||||||||||  | | |||||||||||||    
T  11448048 gtcactatttcc-agttaatcactgccacatcatcaaattaacaaaatggcatgaaaattgacaaaaataccc 11447977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 13058058 - 13058174
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||  ||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||| |   ||     
T  13058058 cttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggtaatttacccctgcattgtttaatcatttaaaatttcgtccctctcccc 13058157  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  13058158 acttaatcactgccacg 13058174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 18831374 - 18831486
Alignment:
Q  42 caattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaactt 141  Q
    |||||||| ||  |||||||||| |||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||  |   || ||||    
T  18831374 caattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcatttaaaatttcgtctctctccccactt 18831473  T
Q  142 aatcactgccacg 154  Q
    |||||||||||||    
T  18831474 aatcactgccacg 18831486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 35508646 - 35508558
Alignment:
Q  39 ttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgt 127  Q
    ||||||||||| ||  ||||||||||| |||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||    
T  35508646 ttgcaattaggggtcgtttaaaaattaatccttgtaatcgttaattctaacaatttacccttgcattgtttaatcatttaaaatttcgt 35508558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 50419044 - 50418928
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| | ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |   ||     
T  50419044 cttgcaattaggggtcgtttaaaaattggtccctctaatcgctaatcctggcaatctacccttgcattgtttaatcatttaaaatttcgtccctctcccc 50418945  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||| ||||    
T  50418944 acttaatcactgtcacg 50418928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 7451855 - 7451946
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||||| ||  |||||||||| |||| |||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  7451855 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtcc 7451946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 50418689 - 50418808
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||||||| |||| || ||||  || ||||||| |  ||||||||||||||||||||||||||||||    
T  50418689 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacca 50418788  T
Q  138 acttaatcactgccacgtca 157  Q
    | ||||||||||||||||||    
T  50418789 atttaatcactgccacgtca 50418808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 4983120 - 4982986
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || |||||||||||||||  ||||||||||  |||||||||| |||||| || |||||||| ||||||| |  ||||||||||||    
T  4983120 ttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcatccttgtaattgctaatcctcgcaatttagccttgcaattattaatcatttaa 4983021  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |   || |||||||||||||||||    
T  4983020 aatttcgtccctctccccacttaatcactgccacg 4982986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 14802125 - 14802027
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    |||||||||| ||||||||| ||||||||||| ||||  ||  |||||| |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  14802125 tttaaaaattggtccttgtattcgctaattctagcaaactattcttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 14802027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 27934535 - 27934669
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || |||||||||||| ||  |||||||||| |||| |||||| |||||| ||||||||||| ||||||| |  ||||||||||||    
T  27934535 ttaatgatgtgattagtccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 27934634  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |   || |||||||||||||||||    
T  27934635 aatttcgtccctctccccacttaatcactgccacg 27934669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 157
Target Start/End: Original strand, 52909275 - 52909393
Alignment:
Q  39 ttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaa 138  Q
    ||||||||||| ||  || ||||||| |||  ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |   || |    
T  52909275 ttgcaattaggggtcgttcaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccatctcccca 52909374  T
Q  139 cttaatcactgccacgtca 157  Q
    |||||||||||||| ||||    
T  52909375 cttaatcactgccatgtca 52909393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 157
Target Start/End: Original strand, 34837081 - 34837214
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||| |||||||||    
T  34837081 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 34837180  T
Q  124 tcgtcctttgaccaacttaatcactgccacgtca 157  Q
    | |||||| |||||| ||||||||||||||||||    
T  34837181 tggtccttggaccaaattaatcactgccacgtca 34837214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 157
Target Start/End: Original strand, 42738038 - 42738171
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| | |||| |||||| |||| ||||||| |  |||||| |||||||||    
T  42738038 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcattttaaccttgcaattgttaatcgtttaaaatt 42738137  T
Q  124 tcgtcctttgaccaacttaatcactgccacgtca 157  Q
    | |||||| |||||| ||||||||||||||||||    
T  42738138 tggtccttggaccaaattaatcactgccacgtca 42738171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 30642565 - 30642433
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| | |||||||| | || |||||||||||  || ||||||||| |||| || |||| |||  ||||||  ||||||||||||||||||||    
T  30642565 atgtgtttcgtccctgcaattatgggtcatttaaaaattcatcattgtaatcgttaatcctagcaaattagtcttgcaaagtttaatcatttaaaatttc 30642466  T
Q  126 gtcctttgaccaacttaatcactgccacgtcat 158  Q
    |||| |||||| ||||||| |||||||||||||    
T  30642465 gtcccttgacccacttaatgactgccacgtcat 30642433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 38 - 158
Target Start/End: Complemental strand, 39539325 - 39539205
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||| | ||  |||||||||| |||  |||||||| ||||||| |||| ||| ||||||||| ||||||||||||||||||||||||||||||     
T  39539325 cttgcaattaagggtcgtttaaaaattggtcaatgtaatcgttaattcttgcaaattagccttgcattctttaatcatttaaaatttcgtcctttgaccc 39539226  T
Q  138 acttaatcactgccacgtcat 158  Q
    | ||||| |||||||| ||||    
T  39539225 agttaatgactgccacatcat 39539205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 49879583 - 49879467
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||| |  ||  ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |   ||     
T  49879583 cttgcaattaggggtcgtttaaaaactgatctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccc 49879484  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  49879483 acttaatcactgccacg 49879467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 7452210 - 7452091
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||  |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||| ||||||||||||    
T  7452210 cttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgacca 7452111  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  7452110 acttaatcactgccacgtca 7452091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 13058389 - 13058270
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||| ||| ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||| ||||||||||||    
T  13058389 cttgcaataaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgacca 13058290  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  13058289 acttaatcactgccacgtca 13058270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 15508079 - 15507961
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||||||||||||||||| ||| ||||||||| |||||| |||||||||||||||||||||||  |   ||     
T  15508079 cttgcaattaggggtcgtttaaaaatt-gtccttgtaatcgctaatcctgacaatttaccattgcatggtttaatcatttaaaatttcgtctctctcccc 15507981  T
Q  138 acttaatcactgccacgtca 157  Q
    |||||||||||||| |||||    
T  15507980 acttaatcactgccgcgtca 15507961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 23455077 - 23455136
Alignment:
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23455077 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 23455136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 35028405 - 35028286
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| | |  |||||||| || |||||||||||||||||||||||||||||||||||||||||  |   ||     
T  35028405 cttgcaattaggggtattttaaaaattggtccatatgttcgctaatccttgcaatttacccttgcattgtttaatcatttaaaatttcgtcactctcccc 35028306  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  35028305 acttaatcactgccacgtca 35028286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 36009203 - 36009104
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |||| |||||||| |||| |||| ||||||||| |||||||||||||||||||||||||||||| |   || |||||||||||||||||    
T  36009203 tttaaaaattggtccctgtaatcgttaatcctggaaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 36009104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 46661321 - 46661202
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| |  ||||| || ||||  || ||||||| |  ||||||||||||||||||||||||||||||    
T  46661321 cttgcaattaggggtcgtttaaaaattggtccctgtatttactaatcctcgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacca 46661222  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  46661221 acttaatcactgccacgtca 46661202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 49879228 - 49879347
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||||| |||||| || ||||  || ||||||| |  ||||||||||||||||||||||||||||||    
T  49879228 cttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacca 49879327  T
Q  138 acttaatcactgccacgtca 157  Q
    | ||||||||||||| ||||    
T  49879328 atttaatcactgccatgtca 49879347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 51692926 - 51692815
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||||||||||||||||    
T  51692926 cttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacca 51692827  T
Q  138 acttaatcactg 149  Q
    ||||||||||||    
T  51692826 acttaatcactg 51692815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 9400913 - 9400779
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || |||||||||||| ||  |||||||||| |||| |||||| |||||| ||||||||||| ||||||| |  ||||||||||||    
T  9400913 ttaatgatgtgattagtccttgcaattaggggtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 9400814  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||| ||| |   || |||||||||||||||||    
T  9400813 aatttcatccctctccccacttaatcactgccacg 9400779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 16005876 - 16005950
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    ||||||||||| ||| ||||||||||||||||||||||||| || || |||||||||||||||||||||||||||    
T  16005876 tttaaaaattaatccctgtaatcgctaattctggcaatttatccatgtattgtttaatcatttaaaatttcgtcc 16005950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 199
Target Start/End: Original strand, 39538110 - 39538262
Alignment:
Q  44 attaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaa 143  Q
    ||||| |||| |||||||||| |||   ||| ||||||||||| | || |||  |||||||| ||||||||||||||||||||||| || | | | ||||    
T  39538110 attagacgttgtttaaaaattggtc---gtattcgctaattcttgaaaattagtcttgcattctttaatcatttaaaatttcgtcccttaatctaattaa 39538206  T
Q  144 tcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    || ||| ||||||||||||||||||||||| ||||  | || ||||||||||||||    
T  39538207 tcgctgtcacgtcatcaaattagcaaaatgacatgtaattgaacaaaaataccctc 39538262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 198
Target Start/End: Original strand, 147344 - 147500
Alignment:
Q  42 caattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaactt 141  Q
    |||||||| ||  |||||||||| |||| |||| |||||||| || ||||  ||  |||||| |  ||||| ||||||||||| |||| |   || | ||    
T  147344 caattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaataatttaaaattttgtccctgagcccaatt 147443  T
Q  142 aatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccct 198  Q
    ||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  147444 aattactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaatgccct 147500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 11524232 - 11524148
Alignment:
Q  160 aaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatgacatttttacccatgacttcatcttc 244  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||| | |||||| |||||||||| |  ||||||||||    
T  11524232 aaattagcaaaatggcatgggaatggacaaaaatatcctcgtcatccattcatgaaatgatatttttacccctatcttcatcttc 11524148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 157
Target Start/End: Original strand, 24411382 - 24411498
Alignment:
Q  41 gcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaact 140  Q
    ||||||||| ||  |||||||||| |||| ||||||||||||  ||| ||||||||||||||||||||||||||||||||  ||||||| |   || |||    
T  24411382 gcaattaggggtagtttaaaaattggtccctgtaatcgctaaccctgacaatttacccttgcattgtttaatcatttaaagattcgtccctcttcccact 24411481  T
Q  141 taatcactgccacgtca 157  Q
    |||||||| ||||||||    
T  24411482 taatcactcccacgtca 24411498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 35027998 - 35028138
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||  |||| |||| | |||||||||||| ||  |||||||||| || | |||| |||||||| || ||||  || ||||||| |  |||||||||    
T  35027998 ggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 35028097  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  35028098 taaaatttcgtcttttgaccaacttaatcaccgccacgtca 35028138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 157
Target Start/End: Complemental strand, 37976557 - 37976441
Alignment:
Q  41 gcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaact 140  Q
    ||||||||| ||  ||||||||||  ||| ||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||  |   || |||    
T  37976557 gcaattaggggtcgtttaaaaattgatccctgtaatcgctaattctgacaatttatcattgcattgtttaatcatttaaaatttcgtcactctccccact 37976458  T
Q  141 taatcactgccacgtca 157  Q
    |||||||||||| ||||    
T  37976457 taatcactgccatgtca 37976441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 24711487 - 24711368
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| ||| |||| |||| || ||||  || ||||||| |  ||||||||||||||||||||| ||||||||    
T  24711487 cttgcaattaggggtcgtttaaaaattggtccatgtcatcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcatttgacca 24711388  T
Q  138 acttaatcactgccacgtca 157  Q
    | ||||||||||||||||||    
T  24711387 atttaatcactgccacgtca 24711368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 34765401 - 34765520
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||| | ||  |||||||||  ||||||||| |||||||| || ||||  || ||||||| |  ||||||||||||||||||||||||||| ||    
T  34765401 cttgcaattaagggtcgtttaaaaatcggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgatca 34765500  T
Q  138 acttaatcactgccacgtca 157  Q
    |||||||||||| |||||||    
T  34765501 acttaatcactgtcacgtca 34765520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 37248612 - 37248493
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| ||||||||||||| || ||||  ||  |||||| |  |||||||||| |||||||||||||||||||    
T  37248612 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatcattaatcattttaaatttcgtcctttgacca 37248513  T
Q  138 acttaatcactgccacgtca 157  Q
    | ||||||| ||||||||||    
T  37248512 atttaatcattgccacgtca 37248493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 43155550 - 43155669
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||| | ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||| ||| ||||||||    
T  43155550 cttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcgttaatcatttaaaatttagtcatttgacca 43155649  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  43155650 acttaatcactgccacgtca 43155669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 43155886 - 43155787
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |||| |||||||| |||| ||||||||||| || |||||| ||||||||||||||||||||||| |   || |||||||||||||||||    
T  43155886 tttaaaaattggtccctgtaatcgttaatcctggcaatttatccctgcattatttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 43155787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 44967090 - 44967209
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||  |||| |||||||| ||  |||  || ||||||| |  ||||||||||||||||| ||||||||||||    
T  44967090 cttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttacaaactagccttgcaatcattaatcatttaaaatttagtcctttgacca 44967189  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  44967190 acttaatcactgccacgtca 44967209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 151
Target Start/End: Original strand, 51203616 - 51203743
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||| |||||||||    
T  51203616 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 51203715  T
Q  124 tcgtcctttgaccaacttaatcactgcc 151  Q
    | |||||| |||||| ||||||||||||    
T  51203716 tggtccttggaccaaattaatcactgcc 51203743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 53701833 - 53701952
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  ||||||||||  ||  ||||||| ||||| ||| ||||||| ||||||||||||||||||||||||||||| ||| |   ||     
T  53701833 cttgcaattaggggtcgtttaaaaattgatctctgtaatctctaatcctgacaatttatccttgcattgtttaatcatttaaaatttcttccctctcccc 53701932  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  53701933 acttaatcactgccacgtca 53701952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 153
Target Start/End: Complemental strand, 1179206 - 1179092
Alignment:
Q  39 ttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaa 138  Q
    ||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  |||||||||||||||||| |||||| |||||    
T  1179206 ttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcatcctttaaccaa 1179107  T
Q  139 cttaatcactgccac 153  Q
    |||||||||||||||    
T  1179106 cttaatcactgccac 1179092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 151
Target Start/End: Complemental strand, 6237248 - 6237114
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||| |||||| ||| |||||| ||||||||||| |||||||| ||||||  |||||| |||||| |||  ||||||||||| || |  |||||||||    
T  6237248 ggtttattgatgtctttagttcttacaattaggcgtcatttaaaatttagtctctgtaattgctaatcctgagaatttacccttacaattgttaatcatt 6237149  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgcc 151  Q
    |||||||| || |||  ||||||||||| ||||||    
T  6237148 taaaatttggttcttgaaccaacttaatgactgcc 6237114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 157
Target Start/End: Complemental strand, 17356312 - 17356210
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |||| |||| ||||||||  ||||||||||| |||||||||||| ||||||||||||||||||| |   || |||||||||||| ||||    
T  17356312 tttaaaaattggtccctgtattcgctaatcttggcaatttactcttgcattgtttgatcatttaaaatttcgtccctctccccacttaatcactgtcacg 17356213  T
Q  155 tca 157  Q
    |||    
T  17356212 tca 17356210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 33247671 - 33247533
Alignment:
Q  16 tggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcat 115  Q
    ||||||||||||||| || || ||||||||||||  |  |||||||||  |||| |||||| |||||| ||||||||||| ||||||| |  ||||||||    
T  33247671 tggtttaatgatgtgattagtccttgcaattagggatcgtttaaaaatccgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcat 33247572  T
Q  116 ttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| ||| |   || |||||||||||||||||    
T  33247571 ttaaaatttcatccctctccccacttaatcactgccacg 33247533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 42738421 - 42738291
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  ||||||||||||||||    
T  42738421 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatt 42738322  T
Q  124 tcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||| |   || |||||||||||||||||    
T  42738321 tcgtccctctccccacttaatcactgccacg 42738291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 23455666 - 23455609
Alignment:
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  23455666 ttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 23455609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 153
Target Start/End: Complemental strand, 32950532 - 32950403
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  |||||||||||| |  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||| |||||||||    
T  32950532 tgatgtgtttagcccttgcaattaggtggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 32950433  T
Q  124 tcgtcctttgaccaacttaatcactgccac 153  Q
    | |||||| |||||| ||||||||||||||    
T  32950432 tggtccttggaccaaattaatcactgccac 32950403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 52815787 - 52815844
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccct 198  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  52815787 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccct 52815844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 54087085 - 54087012
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 128  Q
    |||||||||| |||| |||||||| ||||  || ||||||||||||||||||||||||||||||||||||||||    
T  54087085 tttaaaaattggtccctgtaatcgttaatcatgacaatttacccttgcattgtttaatcatttaaaatttcgtc 54087012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 38982572 - 38982516
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  38982572 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 38982516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 52816399 - 52816343
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  52816399 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 52816343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 56556706 - 56556762
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  56556706 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 56556762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 17356006 - 17356065
Alignment:
Q  98 cttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17356006 cttgcattcattaatcatttaaaatttcgtcatttgaccaacttaatcactgccacgtca 17356065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 18831724 - 18831605
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| ||||||||  | ||||  || ||||||| |  |||||||||||||||||| || ||||||||    
T  18831724 cttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcattgcaaactaaccttgcaatcattaatcatttaaaatttcatcatttgacca 18831625  T
Q  138 acttaatcactgccacgtca 157  Q
    |||||||||| |||||||||    
T  18831624 acttaatcaccgccacgtca 18831605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 51692574 - 51692665
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||||  ||  ||||||||||  ||  ||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||    
T  51692574 cttgcaattagaggtcgtttaaaaattgatctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcacttaaaatttcgtcc 51692665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 52909644 - 52909541
Alignment:
Q  54 atttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    ||||||||||| |||  |||| |||||||| || ||||  || ||||||| |  ||||| |||||||||||||||||||||||||||||||||||| |||    
T  52909644 atttaaaaattggtctatgtattcgctaatccttgcaaactagccttgcaatcattaattatttaaaatttcgtcctttgaccaacttaatcactgtcac 52909545  T
Q  154 gtca 157  Q
    ||||    
T  52909544 gtca 52909541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 53129913 - 53129798
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||| ||| ||  ||||||||||  |||| |||||||||||| || |||||||||||| ||||||||| ||| ||||||||||||||| |   ||     
T  53129913 cttgcaatcaggggtcgtttaaaaattgatcctcgtaatcgctaatccttgcaatttaccctcgcattgtttcatcgtttaaaatttcgtccctctcccc 53129814  T
Q  138 acttaatcactgccac 153  Q
    ||||||||||||||||    
T  53129813 acttaatcactgccac 53129798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 9145156 - 9145026
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||  |||| |||||| |||||| |||||| |||| || |||| |  ||||||||||||||||    
T  9145156 tgatgtgtttagcccttgcaattaggcggcatttaaaaatgcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatt 9145057  T
Q  124 tcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||| |   || |||||||||||||||||    
T  9145056 tcgtccctctccccacttaatcactgccacg 9145026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 36008882 - 36008984
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |||| |||| ||||||||  | ||||  || ||||||| |  ||||||||||||||||| ||||||||||||||||||||||| |||||    
T  36008882 tttaaaaattggtccctgtattcgctaatcattgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaacttaatcactaccacg 36008981  T
Q  155 tca 157  Q
    |||    
T  36008982 tca 36008984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 11446279 - 11446388
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| | |||||||||  || ||||||||||| || | || ||||| |||| ||||||| |||||||||||  |||||||| |||||||||||    
T  11446279 atgtgtttcgtccctgcaattagaggtcatttaaaaattggttcatggaatcgttaatcctggcaaattacccttgcaaagtttaatcttttaaaatttc 11446378  T
Q  126 gtcctttgac 135  Q
    |||| |||||    
T  11446379 gtcccttgac 11446388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #114
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 22567180 - 22567056
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || ||||||||||||||| ||||||||||| |||| |||||| |||||| || ||||||              ||||||||||||    
T  22567180 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaattg-------------ttaatcatttaa 22567094  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  22567093 aatttggtccttggaccaacttaatcactgccacgtca 22567056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #115
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 37976244 - 37976293
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37976244 ttaatcatttaaaatttcgtcctttgaccaacttaatcattgccacgtca 37976293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #116
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 54086786 - 54086835
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  54086786 ttaatcatttaaaattttgtcctttgaccaacttaatcactgccacgtca 54086835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #117
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 6236831 - 6236942
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||| |||||| ||| || ||||||||||| ||| |||||||| |||||| ||||||||| |||| | || |||||||||||||| |  |||||||||    
T  6236831 ggtttattgatgtctttagtccttgcaattagacgtcatttaaaatttagtc-ttgtaatcgttaatcccgggaatttacccttgcaattgttaatcatt 6236929  T
Q  117 taaaatttcgtcc 129  Q
    |||||||| ||||    
T  6236930 taaaatttggtcc 6236942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #118
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 157
Target Start/End: Original strand, 8438305 - 8438420
Alignment:
Q  41 gcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaact 140  Q
    ||||||||| || ||||||||||| ||| | ||||||| |||| ||||||| |||| ||||||    |||||||||||||||||||||| |||||| |||    
T  8438305 gcaattaggggtcatttaaaaattggtcat-gtaatcgttaatcctggcaaattactcttgcaaaccttaatcatttaaaatttcgtcccttgacccact 8438403  T
Q  141 taatcactgccacgtca 157  Q
    ||||||| | |||||||    
T  8438404 taatcaccgtcacgtca 8438420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #119
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 56557301 - 56557245
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||    
T  56557301 taatcactgccacgtcatcaaattagcaaaatggcataggaattgacaaaaataccc 56557245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #120
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 157
Target Start/End: Complemental strand, 8439642 - 8439512
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| || | ||||| | ||| ||||||||||  || ||||||||| |||| || |||| ||| |||||||    ||||||||||||||||||    
T  8439642 atgtgtttcgtcct-gtaattaagggttgtttaaaaattgatcattgtaatcgttaatcctagcaaattatccttgcaaacattaatcatttaaaatttc 8439544  T
Q  126 gtcctttgaccaacttaatcactgccacgtca 157  Q
    |||| |||||| |||||||||| |||||||||    
T  8439543 gtcccttgacccacttaatcaccgccacgtca 8439512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #121
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 23613685 - 23613566
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  ||||||||||  ||| |||| |||||||| || |||| |||  |||||| |   |||||||||||||||| || |||||||||    
T  23613685 cttgcaattaggggtcgtttaaaaattgatccctgtattcgctaatccttgcaaattagtcttgcaatcactaatcatttaaaatttagttctttgacca 23613586  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||| ||||||||    
T  23613585 acttaatcactaccacgtca 23613566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #122
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 148092 - 148002
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccct 198  Q
    |||||||||||||||||||||| |   || | ||||| |||| ||||||||||||||||||||||||||||  | ||||||||||| ||||    
T  148092 ttaatcatttaaaatttcgtccatgagcccagttaattactgtcacgtcatcaaattagcaaaatggcatgaaaatggacaaaaatgccct 148002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #123
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 250
Target Start/End: Complemental strand, 3032833 - 3032775
Alignment:
Q  192 ataccctcgtcatccattcgtaaaatgacatttttacccatgacttcatcttcatctca 250  Q
    ||||||||||||||||||||| ||||||||||||||||| || |||||||||| |||||    
T  3032833 ataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttcttctca 3032775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #124
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 32950149 - 32950279
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| ||||  ||||| |||||| |||||| |||| || |||| |  ||||||||||||||||    
T  32950149 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtcccagtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatt 32950248  T
Q  124 tcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||  |   || |||||||||||||||||    
T  32950249 tcgtctctctccccacttaatcactgccacg 32950279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #125
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 34837464 - 34837334
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||  |||||| |||||| |||||| |||| || |||| |  |||||| |||||||||    
T  34837464 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 34837365  T
Q  124 tcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||| |   || |||||||||||||||||    
T  34837364 tcgtccctctccccacttaatcactgccacg 34837334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #126
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 53702149 - 53702100
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  53702149 ttaatcatttaaaatttcgtcatttgaccaacttaatcaatgccacgtca 53702100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #127
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 1178134 - 1178174
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 148  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1178134 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 1178174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #128
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 38012191 - 38012307
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||| ||||||||||||||  |   ||     
T  38012191 cttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttcgtctctctcccc 38012290  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  38012291 acttaatcactgccacg 38012307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #129
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 22566837 - 22566936
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| || | |||||| |||||| ||||||||||| ||||||| |  |||||||||||||||||| ||| |   || |||||||||||||||||    
T  22566837 tttaaaaattcgttcctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcatccctctccccacttaatcactgccacg 22566936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #130
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 24349695 - 24349814
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  |||||||||||||||||||||| |   ||     
T  24349695 cttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtccctctcccc 24349794  T
Q  138 acttaatcactgccacgtca 157  Q
    | ||||||||||||||||||    
T  24349795 agttaatcactgccacgtca 24349814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #131
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 150
Target Start/End: Original strand, 53129597 - 53129639
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgc 150  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  53129597 ttaatcatttaaaatttcgttctttgaccaacttaatcactgc 53129639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #132
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 16006143 - 16006095
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  16006143 ttaatcatttaaaatttagtccttt-accaacttaatcactgccacgtca 16006095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #133
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 27934837 - 27934788
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||||||| |||||| |||||||||||||||||||| ||||    
T  27934837 ttaatcatttaaaatttggtccttggaccaacttaatcactgccatgtca 27934788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #134
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 38813678 - 38813731
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaata 194  Q
    |||||||||||||||| |||||||||||||||| ||||||| | ||||||||||    
T  38813678 taatcactgccacgtcttcaaattagcaaaatgacatgggaattgacaaaaata 38813731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #135
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 38814303 - 38814247
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||| |||| |  | |||||||||||||    
T  38814303 taatcactgccacgtcatcaaattagcaaaatgacatgagcattgacaaaaataccc 38814247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #136
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 10780734 - 10780849
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| || | |||||||| || ||||  || ||||||| |  |||||||||||||||||| ||||||||||     
T  10780734 cttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcatcctttgaccc 10780833  T
Q  138 acttaatcactgccac 153  Q
      ||||| ||||||||    
T  10780834 gattaatgactgccac 10780849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #137
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 10781891 - 10781800
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||||||||    
T  10781891 cttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcc 10781800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #138
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 10974343 - 10974458
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| || | |||||||| || ||||  || ||||||| |  |||||||||||||||||| ||||||||||     
T  10974343 cttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcatcctttgaccc 10974442  T
Q  138 acttaatcactgccac 153  Q
      ||||| ||||||||    
T  10974443 gattaatgactgccac 10974458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #139
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 24350839 - 24350724
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| || | |||||||| || ||||  || | ||||| |  |||||||||||||||||||||||||||||     
T  24350839 cttgcaattaggggtcgtttaaaaattggtccctgcattcgctaatccttgcaaactagctttgcaatcattaatcatttaaaatttcgtcctttgaccc 24350740  T
Q  138 acttaatcactgccac 153  Q
      ||||| ||||||||    
T  24350739 gattaatgactgccac 24350724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #140
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 157
Target Start/End: Original strand, 40387476 - 40387607
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||| | | |||||||||| |  ||||||||||| |||| |||| |||||||| ||||||| || ||| ||||    ||||||||||||||||||    
T  40387476 atgtgtttcatccctgcaattaggggccatttaaaaattggtccctgtattcgctaatcctggcaaattgcccctgcaaaagttaatcatttaaaatttc 40387575  T
Q  126 gtcctttgaccaacttaatcactgccacgtca 157  Q
    || | |   |  ||||||||||||||||||||    
T  40387576 gttcctcttctcacttaatcactgccacgtca 40387607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #141
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 54713667 - 54713770
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    ||||||||||| ||  |||| |||||||| || ||||  || ||||||| |  |||||||||||||||||||||||||||||   ||||||| ||||| |    
T  54713667 tttaaaaattaatctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccctgttaatcattgccatg 54713766  T
Q  155 tcat 158  Q
    ||||    
T  54713767 tcat 54713770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #142
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 15507768 - 15507813
Alignment:
Q  112 tcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||| |||||||||||||||||||||||||||| || |||||||    
T  15507768 tcatttcaaatttcgtcctttgaccaacttaatcattgtcacgtca 15507813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #143
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 157
Target Start/End: Complemental strand, 24411683 - 24411646
Alignment:
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  24411683 aatttcgtcctttgaccaacttaatcactaccacgtca 24411646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #144
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 32062598 - 32062703
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||||||| || | || ||||||| || ||||||||||| |||||||||| |  |||| ||| ||| ||| ||||| |   |||||||||||||||||||    
T  32062598 atgtgtttggtccctgaaattaggggtcatttaaaaattggtccttgtaaacattaatcctgacaaattagccttgtaaaatttaatcatttaaaatttc 32062697  T
Q  126 gtcctt 131  Q
    ||||||    
T  32062698 gtcctt 32062703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #145
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 35508332 - 35508380
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||||||| ||| |||||||||||||||||||| |||||||    
T  35508332 ttaatcatttaaaattttgtc-tttgaccaacttaatcactgtcacgtca 35508380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #146
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 157
Target Start/End: Complemental strand, 29321324 - 29321193
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| |||||||||| | || ||||||||||| ||   | |||||| |||||||||||| ||||| || ||   ||||||||||||| | ||     
T  29321324 atgtgtttcgtccttgcaattaagggtcatttaaaaattggtttctataatcgttaattctggcaaattaccttttcaaattttaatcatttaagaattg 29321225  T
Q  126 gtcctttgaccaacttaatcactgccacgtca 157  Q
    || | |  ||| | ||||||||||||||||||    
T  29321224 gttcctcaacctagttaatcactgccacgtca 29321193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #147
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 41582456 - 41582559
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||| | | |||||| ||| || ||||||||||| |||| | |||||| |||| ||||||| || ||| ||||    ||||||||||||||||||    
T  41582456 atgtgtttcatccctgcaatcaggggtcatttaaaaattggtccctctaatcgttaatcctggcaaattgcccctgcaaaagttaatcatttaaaatttc 41582555  T
Q  126 gtcc 129  Q
    ||||    
T  41582556 gtcc 41582559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #148
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 27934907 - 27934849
Alignment:
Q  25 gatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaat 83  Q
    |||||| || || ||||||||||||||| ||||||||||| |||| |||||| ||||||    
T  27934907 gatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaat 27934849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 184; Significance: 1e-99; HSPs: 76)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 16 - 243
Target Start/End: Original strand, 21836031 - 21836256
Alignment:
Q  16 tggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcat 115  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  21836031 tggtttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagtc-ttgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 21836129  T
Q  116 ttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaa 215  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||    
T  21836130 ttaaaatttcgtcctttgac-aacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatccattcttgaa 21836228  T
Q  216 atgacatttttacccatgacttcatctt 243  Q
    ||||||||||||||| || |||||||||    
T  21836229 atgacatttttacccctgtcttcatctt 21836256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 7160804 - 7161037
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||  ||||||||||||| |||||||||||| |||||||||||||||||||    
T  7160804 ggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttactcttgcattgtttaatcatt 7160903  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaa 216  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||    
T  7160904 taaaatttcgtcctttgaccaacttaatcactaccacgtcatcaaattagcaaaatagcatgggaatggacaaaaataccctcgtcatccattcgtgaaa 7161003  T
Q  217 tgacatttttacccatgacttcatcttcatctca 250  Q
    |||||||||||||| || |||||||||| |||||    
T  7161004 tgacatttttacccctgtcttcatcttcttctca 7161037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 22503197 - 22502967
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  22503197 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttatccttgcattgtttaatcatttaa 22503098  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||    
T  22503097 attttcgtcatttgaccaacttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcgtcatccattcgtgaaatga 22502998  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    ||||||||||| || |||||||||| |||||    
T  22502997 catttttacccctgtcttcatcttcttctca 22502967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 19 - 250
Target Start/End: Complemental strand, 31407302 - 31407071
Alignment:
Q  19 tttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcattta 118  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  31407302 tttaatgatgtgcttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcattta 31407203  T
Q  119 aaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatg 218  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||    
T  31407202 aaatttcgtcctttgaccaacttaatcactgtcacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcgtcatccattcgtgaaatg 31407103  T
Q  219 acatttttacccatgacttcatcttcatctca 250  Q
    ||||||||| || || |||||||||| |||||    
T  31407102 acatttttatccctgtcttcatcttcttctca 31407071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 7905669 - 7905436
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||||||||||||||| |||||||||||| || ||||| ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  7905669 ggtttaatgatgtgtttcgtccttgcaattaggtgtcatttataaatttgtccctataatcgctaattctggcaatttacccttgcattgtttaatcatt 7905570  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaa 216  Q
    | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||    
T  7905569 tcaaatttcgtcatttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatccatttgtgaaa 7905470  T
Q  217 tgacatttttacccatgacttcatcttcatctca 250  Q
    ||||||| |||||| || |||||| ||| |||||    
T  7905469 tgacattcttacccctgtcttcatattcttctca 7905436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 12065220 - 12065453
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgttt-aatcat 115  Q
    |||||||||||| ||||| |  |||||||||||| | ||||||||||||||| | |||||||||||||||||||||||||||||| ||||||| ||||||    
T  12065220 ggtttaatgatgcgtttcatctttgcaattaggcatcatttaaaaattagtcat-gtaatcgctaattctggcaatttacccttgtattgttttaatcat 12065318  T
Q  116 ttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaa 215  Q
    ||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||    
T  12065319 ttaaaatttcgacctttgaccaacttaatcactgtcaggtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatccatttgtgaa 12065418  T
Q  216 atgacatttttacccatgacttcatcttcatctca 250  Q
    ||||||||||||||| || |||||||||| |||||    
T  12065419 atgacatttttacccttgtcttcatcttcttctca 12065453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 22502767 - 22502956
Alignment:
Q  10 attttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgttt 109  Q
    |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  22502767 atttttaggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgttt 22502866  T
Q  110 aatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| || |||||||||||||||||    
T  22502867 aatcatttaaaatttcgtcctttgaccaacttaataactgccaagtcatcaaattagcaaaatggtatgagaatggacaaaaataccctc 22502956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 20 - 244
Target Start/End: Complemental strand, 15913971 - 15913747
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| |||||||||| | || ||||||||||| |||| | |||||| ||||  ||| || |||||| || |||||||||| ||||||    
T  15913971 ttaatgatgtgtttcgtccttgcaattaagggtcatttaaaaatttgtccatataatcgttaatcttggaaaattacccctgtattgtttaataatttaa 15913872  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  15913871 aatttcgtcctttgaccaacttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatccattcgtgaaatga 15913772  T
Q  220 catttttacccatgacttcatcttc 244  Q
    ||||||||||| || ||||||||||    
T  15913771 catttttacccctgtcttcatcttc 15913747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 21836462 - 21836271
Alignment:
Q  11 ttttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgttta 110  Q
    ||||| || ||||||||||||||| | ||||||||||||||| |||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||    
T  21836462 tttttaggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagttcttgtaatcgctaatcctgacaatttacccttgcattgttta 21836363  T
Q  111 atcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||| |||||||    
T  21836362 atcatttaaaatttcgtcctttgaccaacttaatcactgccaagtcatcaaattaacaaaatggcatgggaatggacaaaaatatcctcgtc 21836271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 6517501 - 6517687
Alignment:
Q  15 ttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatca 114  Q
    |||| ||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||    
T  6517501 ttggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcctggcaatttacc-ttgcattgtttaatca 6517599  T
Q  115 tttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| || ||||||||| |||||||    
T  6517600 tttaaaatttcgtcctttgaccaacttaatcactaccaagtcatcaaattagcaaaatggcatgggaatgaacaaaaatagcctcgtc 6517687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 7905237 - 7905428
Alignment:
Q  11 ttttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgttta 110  Q
    |||||| | ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  7905237 ttttttagcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgttaatcctggcaatttacccttgcattattta 7905336  T
Q  111 atcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||||||||||||||| |||||||||||||||||| | || ||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  7905337 atcatttaaaatttcgtcatttgaccaacttaatcaccgtcaagtcatcaaattagcaaaatggcacgggaatggacaaaaataccctcgtc 7905428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 15913548 - 15913733
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||    
T  15913548 ggtttaatgatgtgtttcgttattgcaattaggcgtcatttaaaaattagtctttgtaattgctaattctggtaatttacccttgcattgtttaatcatt 15913647  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||||||||| ||||| ||||||||||||| ||| |||||||||||||||||||||||||| | | ||||||||||||||||||    
T  15913648 taaaatttcgtcatttgaacaacttaatcactaccaagtcatcaaattagcaaaatggcatggaaattgacaaaaataccctcgtc 15913733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 31406876 - 31407063
Alignment:
Q  15 ttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatca 114  Q
    |||| ||||| ||||||||||| ||||||||||||||| |||||||||||||||| |||||||| |||| |||| |||||  ||||||||| ||||||||    
T  31406876 ttggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggtaatttgtccttgcattatttaatca 31406975  T
Q  115 tttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  31406976 tttaaaatttcgtcctttgacaaacttaatcactcccaagtcatcaaattagcaaaatggcatggaaatggacaaaaataccctcgtc 31407063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 7161227 - 7161045
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    |||||||| | |||||| ||||||||||||||| |||||||||||||||| | ||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  7161227 ttaatgatatatttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcactaatcctgacaatttacccttgcattgtttaatcatttaa 7161128  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||| ||||||||||||||||||   || ||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  7161127 aatttcgtcatttgaccaacttaatcaccatcaagtcatcaaattagcaaaattgcatgggaatggacaaaaataccatcgtc 7161045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 20 - 250
Target Start/End: Original strand, 10781150 - 10781391
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatc------ 113  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||||||||| || ||||| || |  |||||||||||||||| |||||||||||          
T  10781150 ttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtccctgcaatcgttattcgtggcaatttacccttgtattgtttaatcttttat 10781249  T
Q  114 -atttaaaatttcgtcctttgaccaacttaatcactgccacgtc-----atcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatcca 207  Q
     ||||||||||||||| ||||||||||||||||||| |||||||     || |||||||||||||| ||||| | |||||||||||| ||||||||||||    
T  10781250 catttaaaatttcgtc-tttgaccaacttaatcactaccacgtcattaaattaaattagcaaaatgccatggtaatggacaaaaatatcctcgtcatcca 10781348  T
Q  208 ttcgtaaaatgacatttttacccatgacttcatcttcatctca 250  Q
    ||||| ||||||||||||||||| || |||||||||| |||||    
T  10781349 ttcgtgaaatgacatttttacccctgtcttcatcttcttctca 10781391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 54 - 202
Target Start/End: Complemental strand, 10781547 - 10781399
Alignment:
Q  54 atttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    ||||||||||||| | ||||||||| |||| ||| ||||||| |||||||||||||||| ||||||||||| || |||||||||||||||||||| |||     
T  10781547 atttaaaaattagccattgtaatcgttaatcctgacaatttatccttgcattgtttaattatttaaaattttgttctttgaccaacttaatcactaccaa 10781448  T
Q  154 gtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  10781447 gtcatcaaattcgcaaaatggcatgggaatggacaaaaatatcctcgtc 10781399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 199
Target Start/End: Original strand, 8089466 - 8089625
Alignment:
Q  40 tgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaac 139  Q
    |||||||||| ||  |||||||||| |||| | |||||| |||| || |||| ||||||||||||||||||||||||||||||||||||| || ||| ||    
T  8089466 tgcaattaggggtcgtttaaaaattggtccctataatcgttaatccttgcaaattacccttgcattgtttaatcatttaaaatttcgtcccttaacccac 8089565  T
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    ||||| || | ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  8089566 ttaatgaccgacacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 8089625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 152
Target Start/End: Original strand, 32593493 - 32593625
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    |||||||||||||| || ||| ||||||||||| |||||||||||||||| | ||||||||||| ||| |||||||||||||||||  ||||||||||||    
T  32593493 ttaatgatgtgtttagtcctttcaattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaatttacccttgcatttgttaatcatttaa 32593592  T
Q  120 aatttcgtcctttgaccaacttaatcactgcca 152  Q
    ||||||||| || ||||||||||||||||||||    
T  32593593 aatttcgtctttggaccaacttaatcactgcca 32593625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 14196618 - 14196755
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || ||||||||||||||| ||||||||||| |||| |||||| |||||||||||||||||| | ||||| |  ||||||||||||    
T  14196618 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaattctggcaatttagctttgcaattgttaatcatttaa 14196717  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||| |||||| ||||||||||||||||| |||||||    
T  14196718 aatttggtccttggaccaacttaatcactgtcacgtca 14196755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 149
Target Start/End: Original strand, 25485947 - 25486085
Alignment:
Q  11 ttttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgttta 110  Q
    ||||| |||||||||||||| || || |||||||||| |||| ||||||||||| |||| |||||| |||||| ||||||||||| ||||||| |  |||    
T  25485947 tttttaggtttaatgatgtgattagtccttgcaattaagcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgtta 25486046  T
Q  111 atcatttaaaatttcgtcctttgaccaacttaatcactg 149  Q
    |||||||||||||| |||||| |||||| ||||||||||    
T  25486047 atcatttaaaatttggtccttggaccaatttaatcactg 25486085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 30337470 - 30337586
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |   ||     
T  30337470 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattggttaatcatttaaaatttcgtccctctcccc 30337569  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  30337570 acttaatcactgccacg 30337586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 30337825 - 30337706
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| || ||||||||||| |||| ||||||||||||| || ||||  || ||||||| |  ||||||||||||||||||||||||||||||    
T  30337825 cttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacca 30337726  T
Q  138 acttaatcactgccacgtca 157  Q
    | ||||||||||||||||||    
T  30337725 atttaatcactgccacgtca 30337706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 33517572 - 33517674
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |   || ||||||||||||| |||    
T  33517572 tttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgctacg 33517671  T
Q  155 tca 157  Q
    |||    
T  33517672 tca 33517674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 21628120 - 21628001
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||   ||||||||| |||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||| |   ||     
T  21628120 cttgcaattaggggtcgcttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaattttgtccctctcccc 21628021  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  21628020 acttaatcactgccacgtca 21628001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 33517941 - 33517822
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||||||||||||||||    
T  33517941 cttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatcatttaaaatttcgtcctttgacca 33517842  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  33517841 acttaatcactgccacgtca 33517822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 12080657 - 12080776
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  ||||||||||  ||| |||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||| |   ||     
T  12080657 cttgcaattaggggtcgtttaaaaattgctccctgtaatcgctaatcatggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctcccc 12080756  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||| ||||    
T  12080757 acttaatcactgccatgtca 12080776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 17734217 - 17734336
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| || |||||||| |||||| || ||||  || ||||||| |  ||||||||||||||||||||||||||||||    
T  17734217 cttgcaattaggggtcgtttaaaaattggttcttgtaattgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacca 17734316  T
Q  138 acttaatcactgccacgtca 157  Q
    | ||||||||||||||||||    
T  17734317 atttaatcactgccacgtca 17734336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 30726166 - 30726047
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || ||||| | |  ||||||||||||||||||||||||||||||    
T  30726166 cttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgaaatcattaatcatttaaaatttcgtcctttgacca 30726067  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  30726066 acttaatcactgccacgtca 30726047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 30804268 - 30804149
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  ||||||||||  ||| |||| ||||||||||| ||||  || | ||||| |  ||||||||||||||||||||||||||||||    
T  30804268 cttgcaattaggggtcgtttaaaaattgatccctgtattcgctaattcttgcaaactagcgttgcaatcattaatcatttaaaatttcgtcctttgacca 30804169  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  30804168 acttaatcactgccacgtca 30804149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 11392876 - 11392978
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |||||||||||||||||| ||   |||||||||||||||||||||||||||||||||||||||  |   |||||||||||||||||| |    
T  11392876 tttaaaaattggtccttgtaatcgctaatcctaataatttacccttgcattgtttaatcatttaaaatttcgtctatctcccaacttaatcactgccatg 11392975  T
Q  155 tca 157  Q
    |||    
T  11392976 tca 11392978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 14197009 - 14196875
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || |||||||||||||||  |||||||||| |||| |||||| |||||| ||||||||||| ||||||| |  ||||||||||||    
T  14197009 ttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 14196910  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacg 154  Q
    ||||||| || |   || |||||||||||||||||    
T  14196909 aatttcgcccctctccccacttaatcactgccacg 14196875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 28000761 - 28000645
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||||||  ||||||||||| |||  |||||| |||||||||||||||||| ||||||| |  |||||||||||||||||||||| |   ||     
T  28000761 cttgcaattaggcggcatttaaaaatttgtctctgtaattgctaattctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctctcccc 28000662  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  28000661 acttaatcactgccacg 28000645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 30725769 - 30725871
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||| |||| |||||||||||||| ||  |||||||||| |||  ||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||    
T  30725769 atgtatttcattcttgcaattagg-gtcgtttaaaaattggtctctgtaatcgctaatcctgccaatttacccttgcactgtttaatcatttaaaatttc 30725867  T
Q  126 gtcc 129  Q
    ||||    
T  30725868 gtcc 30725871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 33647358 - 33647239
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||| |||||||||| |    
T  33647358 cttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactaaccttgcaatcattaatcatttaaaatttagtcctttgacaa 33647259  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  33647258 acttaatcactgccacgtca 33647239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 198
Target Start/End: Complemental strand, 13379887 - 13379729
Alignment:
Q  40 tgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaac 139  Q
    |||||||||| ||  |||||||||| |||| |||| ||||||||||| ||||  || ||||||| |  |||||||||||||||||||||| |   || |     
T  13379887 tgcaattaggggtcgtttaaaaattggtccctgtattcgctaattcttgcaaactagccttgcaatcattaatcatttaaaatttcgtccctgagcccag 13379788  T
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccct 198  Q
    ||||| |||| || |||||||||||||||||||||  ||||| ||||||||||| ||||    
T  13379787 ttaattactgtcatgtcatcaaattagcaaaatggtttgggaatggacaaaaatgccct 13379729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 21627751 - 21627853
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    ||||||||||  ||| |||| |||||||| || ||||  || ||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||    
T  21627751 tttaaaaattgatccatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 21627850  T
Q  155 tca 157  Q
    |||    
T  21627851 tca 21627853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 157
Target Start/End: Original strand, 362877 - 363010
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| | |||| |||||| |||| || |||| |  |||||| |||||||||    
T  362877 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 362976  T
Q  124 tcgtcctttgaccaacttaatcactgccacgtca 157  Q
    | |||||| |||||| ||||||||||||||||||    
T  362977 tggtccttggaccaaattaatcactgccacgtca 363010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 3059257 - 3059369
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||  |||| |||| | |||||||||| | ||  |||||||  | |||| ||||||||||||| || |||||||||||||||||||||||||||||    
T  3059257 ggtttaaatatgtatttcatccttgcaattaagggtcgtttaaaatattgtccatgtaatcgctaatcctagcaatttacccttgcattgtttaatcatt 3059356  T
Q  117 taaaatttcgtcc 129  Q
    |||||||||||||    
T  3059357 taaaatttcgtcc 3059369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 28000385 - 28000525
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||| |||||||||| |  ||||||||||||||  ||||||||||| |||| | |||| |||||| ||| || |||| || |||| |  |||||| ||    
T  28000385 ggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctttaattgctaatcctgtcattttaaccctgcaattgttaatcgtt 28000484  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||| |||||| |||||| ||||||||||||||||||    
T  28000485 taaaatttggtccttggaccaaattaatcactgccacgtca 28000525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 3059663 - 3059544
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  |||||||||||||||||| || ||||||||    
T  3059663 cttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcatcttttgacca 3059564  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||| ||||    
T  3059563 acttaatcactgccatgtca 3059544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 17734553 - 17734454
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    ||||||||||  ||| ||||||||||||| ||  |||||||||||||||||||||||||||||||||||| |||| |   || |||||||||||||||||    
T  17734553 tttaaaaattgatccatgtaatcgctaatcctatcaatttacccttgcattgtttaatcatttaaaattttgtccctctccccacttaatcactgccacg 17734454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 55 - 198
Target Start/End: Original strand, 20651048 - 20651191
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| || | |||| |||||||| || ||||   | ||||||| |  |||||||||||||||||||||| |    | | ||||| |||||||||    
T  20651048 tttaaaaattggttcctgtattcgctaatccttgcaaaccagccttgcaatcattaatcatttaaaatttcgtccatgagtccagttaataactgccacg 20651147  T
Q  155 tcatcaaattagcaaaatggcatgggagtggacaaaaataccct 198  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||    
T  20651148 tcatcaaattagcaaaatggcatgggaatggacaaaaatgccct 20651191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 157
Target Start/End: Complemental strand, 28498444 - 28498313
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| | ||||||||||  | ||||||||||| |||||||||||||||||| |||||||  ||||||  ||  |||||||||||||||||||     
T  28498444 atgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcgctaatcctggcaaactaccctcccaaagtttaatcatttaaaatttg 28498345  T
Q  126 gtcctttgaccaacttaatcactgccacgtca 157  Q
    |||| |   || | ||||||||||||||||||    
T  28498344 gtccctgagcccagttaatcactgccacgtca 28498313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 152
Target Start/End: Original strand, 30803882 - 30803996
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||| |||| ||  ||||||||||  ||  |||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||| |   ||     
T  30803882 cttgcaactaggtgtcgtttaaaaattgatctatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttcgtccctctcccc 30803981  T
Q  138 acttaatcactgcca 152  Q
    |||||||||||||||    
T  30803982 acttaatcactgcca 30803996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 157
Target Start/End: Original strand, 26463202 - 26463319
Alignment:
Q  40 tgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaac 139  Q
    |||||||||| ||  |||||||||| |||| |||| ||| |||| ||||||| |||||||||||  |||||||||||||||||||||||| |   || |     
T  26463202 tgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcctggcaaattacccttgcaaagtttaatcatttaaaatttcgtccctcatcccag 26463301  T
Q  140 ttaatcactgccacgtca 157  Q
    ||||||||||||||||||    
T  26463302 ttaatcactgccacgtca 26463319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 363230 - 363090
Alignment:
Q  14 tttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatc 113  Q
    ||||| ||| |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  ||||||    
T  363230 tttggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatc 363131  T
Q  114 atttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
     ||||||||||||||| |   || |||||||||||||||||    
T  363130 gtttaaaatttcgtccctctccccacttaatcactgccacg 363090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 14657185 - 14657129
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  14657185 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 14657129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 33400090 - 33400146
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  33400090 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 33400146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 11434823 - 11434942
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||| | ||  |||||||||| |||| |||| ||||||||  | ||||  || ||||||| |  |||||||||||||||||||||||||||||     
T  11434823 cttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatcgttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccc 11434922  T
Q  138 acttaatcactgccacgtca 157  Q
    | ||||||||||||||||||    
T  11434923 agttaatcactgccacgtca 11434942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 12081043 - 12080932
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  ||  |||||| |  ||||||||||||||||||||||||||||||    
T  12081043 cttgcaattaggagtcgtttaaaaatttgtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctttgacca 12080944  T
Q  138 acttaatcactg 149  Q
    ||||||| ||||    
T  12080943 acttaattactg 12080932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 55 - 165
Target Start/End: Original strand, 15115377 - 15115487
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |||| | |||||| |||| || |||| ||| |||||||  ||||||||||||||||||| ||||||  ||| ||||||| ||| |||||    
T  15115377 tttaaaaattggtccctataatcgttaatccttgcaaattagccttgcaaagtttaatcatttaaaatttagtccttacacccacttaattactaccacg 15115476  T
Q  155 tcatcaaatta 165  Q
    |||||||||||    
T  15115477 tcatcaaatta 15115487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 38 - 144
Target Start/End: Original strand, 22367446 - 22367552
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||||   ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  ||||||||||||||||| ||||||||||||    
T  22367446 cttgcaattaggcagcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttggtcctttgacca 22367545  T
Q  138 acttaat 144  Q
    | |||||    
T  22367546 aattaat 22367552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 4117524 - 4117467
Alignment:
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||    
T  4117524 ttaatcactgccacatcatcaaattagcaaaatggcatgggaattgacaaaaataccc 4117467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 193
Target Start/End: Complemental strand, 20651984 - 20651899
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaat 193  Q
    |||||||||||||||||||||| |  ||| | ||||| ||||||||||||| |||||||||||||| ||||||| |||| ||||||    
T  20651984 ttaatcatttaaaatttcgtccctgaacccagttaattactgccacgtcattaaattagcaaaatgacatgggaatggataaaaat 20651899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 8090334 - 8090243
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||||| ||  |||||||||| ||||||||| || ||||| || |||| |||||||||||  ||||||||||||||||||| ||||    
T  8090334 cttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttgcaaattacccttgcaaagtttaatcatttaaaatttggtcc 8090243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 25486320 - 25486188
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    |||||||| || || || ||||||| || ||||  |||||||||| |||| |||||| |||||| | ||||||||| ||||||| |  ||||||||||||    
T  25486320 ttaatgatatggttagtccttgcaactaagcgtcgtttaaaaattcgtccctgtaattgctaatcccggcaatttagccttgcaattgttaatcatttaa 25486221  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |   || |||||||||||||||||    
T  25486220 aatttcgtccct--ccccacttaatcactgccacg 25486188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 157
Target Start/End: Complemental strand, 29810855 - 29810724
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| | ||||||||||  | ||||||||||| |||||||||||| |||||  ||||||  ||||||  ||  |||||||||||||||||||     
T  29810855 atgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcactaatcatggcaaactaccctcccaaagtttaatcatttaaaatttg 29810756  T
Q  126 gtcctttgaccaacttaatcactgccacgtca 157  Q
    |||| |   || | ||||||||||||||||||    
T  29810755 gtccctgagcccagttaatcactgccacgtca 29810724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 22373064 - 22372950
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| ||||  | |||| |  |||||||||||||||||  ||||| |||||    
T  22373064 cttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaatcctgcaattgttaatcatttaaaatttgatccttggacca 22372965  T
Q  138 acttaatcactgcca 152  Q
    | ||||| |||||||    
T  22372964 aattaatgactgcca 22372950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 157
Target Start/End: Original strand, 33647017 - 33647103
Alignment:
Q  71 tgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||||||||  || ||||||||||||||||| ||||||||||||||||||||||  |   || | ||||||||||||||||||    
T  33647017 tgtaatcgctaatcttgccaatttacccttgcattatttaatcatttaaaatttcgtctctctccccatttaatcactgccacgtca 33647103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 14656603 - 14656660
Alignment:
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||| ||||||||||||| |||||||||||||| | |||||||||||||    
T  14656603 ttaatcactgccatgtcatcaaattagtaaaatggcatgggaattgacaaaaataccc 14656660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 8418443 - 8418359
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaat 122  Q
    ||||||||||||  |  |||||||||| || ||||||||||||||||||| |||||||||  |||||| |||||| |||||||||    
T  8418443 cttgcaattaggaatcgtttaaaaattggttcttgtaatcgctaattctgtcaatttacctatgcattatttaattatttaaaat 8418359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 141159 - 141060
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| |||||||||||  |||||||||||||| || | |||||||| |||| || |||| |||| ||||||    ||||||||||||||||||    
T  141159 atgtgtttcgtccttgcaattagatgttatttaaaaatttgttcctgtaatcgttaatccttgcaaattactcttgcaaaaattaatcatttaaaatttc 141060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 149180 - 149081
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| |||||||||||  |||||||||||||| || | |||||||| |||| || |||| |||| ||||||    ||||||||||||||||||    
T  149180 atgtgtttcgtccttgcaattagatgttatttaaaaatttgttcctgtaatcgttaatccttgcaaattactcttgcaaaaattaatcatttaaaatttc 149081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 159
Target Start/End: Complemental strand, 11436006 - 11435955
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatc 159  Q
    |||||||||||||||||||||| |||||| ||||||||| ||||||||||||    
T  11436006 ttaatcatttaaaatttcgtcccttgacccacttaatcattgccacgtcatc 11435955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 15116651 - 15116556
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaa 121  Q
    |||| |||||| |||||||||||| ||  |||||||||| ||||| |||||||||||| || ||||  || |||||||  ||||||||||||||||    
T  15116651 atgtatttcgtccttgcaattaggggtcgtttaaaaattggtcctcgtaatcgctaatccttgcaaactagccttgcaaagtttaatcatttaaaa 15116556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 139883 - 139949
Alignment:
Q  107 tttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatg 173  Q
    ||||||||||||||||||| ||  || | | ||||||| ||||||||||||||||||||||||||||    
T  139883 tttaatcatttaaaatttcatcacttaatccacttaatgactgccacgtcatcaaattagcaaaatg 139949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 147904 - 147970
Alignment:
Q  107 tttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatg 173  Q
    ||||||||||||||||||| ||  || | | ||||||| ||||||||||||||||||||||||||||    
T  147904 tttaatcatttaaaatttcatcacttaatccacttaatgactgccacgtcatcaaattagcaaaatg 147970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 11393194 - 11393096
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    |||||||||| ||||  ||| |||||||| || ||||  ||  |||||| |  |||||||||| |||||||||| ||||||||||||||||||||||||    
T  11393194 tttaaaaattggtccccgtattcgctaatccttgcaaactagacttgcaatcattaatcatttcaaatttcgtcatttgaccaacttaatcactgccac 11393096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 124
Target Start/End: Complemental strand, 12408574 - 12408492
Alignment:
Q  42 caattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaattt 124  Q
    |||||||| ||| ||||||| || ||||||||| |||||||| || |||| ||| |||||||  |||||||||||||||||||    
T  12408574 caattaggggttgtttaaaagttggtccttgtattcgctaatccttgcaaattatccttgcaaagtttaatcatttaaaattt 12408492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 33401103 - 33401045
Alignment:
Q  140 ttaatcactgccacgtcatcaaattagc-aaaatggcatgggagtggacaaaaataccc 197  Q
    |||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||    
T  33401103 ttaaccactgccacgtcatcaaattagcaaaaatggcatgggaattgacaaaaataccc 33401045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 4116922 - 4116979
Alignment:
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||||||||| | ||||||||||||||||||| ||||| | |||||||||||||    
T  4116922 ttaatcactgccacattatcaaattagcaaaatggcgtgggaattgacaaaaataccc 4116979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 1661406 - 1661350
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||| |||| ||||||||||| ||||||||||||||| | |||||||||||||    
T  1661406 taatcacttccacttcatcaaattatcaaaatggcatgggaattgacaaaaataccc 1661350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 24210543 - 24210639
Alignment:
Q  29 tgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||||||| | || ||||||| || ||||||||||| |||  |||||| | ||||  | |||| |||||||||||  ||||||||||||||||||||    
T  24210543 tgtttcgtccctgtaattaggggtcatttaaaaattggtctctgtaattgttaatcatagcaaattacccttgcaaagtttaatcatttaaaatttc 24210639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 681135 - 681044
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||||| ||  |||||||||| |||  |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||||||||    
T  681135 cttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcc 681044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 159
Target Start/End: Original strand, 22617975 - 22618026
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatc 159  Q
    ||||||||||||||| |||||| |||||| || ||||||||| |||||||||    
T  22617975 ttaatcatttaaaatgtcgtccattgacccacctaatcactgtcacgtcatc 22618026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 3176352 - 3176304
Alignment:
Q  148 tgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaatacc 196  Q
    |||||||||||||||||| |||||| | ||| || ||||||||||||||    
T  3176352 tgccacgtcatcaaattaccaaaatagtatgagaatggacaaaaatacc 3176304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 183; Significance: 4e-99; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 11563 - 11333
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||| | ||||||||||||||| |||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||    
T  11563 ttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaa 11464  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  11463 aatttcgtcttttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatccattcgtgaaatga 11364  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    ||||||||||| || |||||||||| |||||    
T  11363 catttttacccctgtcttcatcttcttctca 11333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 11140 - 11325
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    ||||||||||||||||||||  |||||||||| ||| || ||||||||||||  ||| |||||||||  |||||||||||||||||||||||||||||||    
T  11140 ggtttaatgatgtgtttcgtcgttgcaattagtcgtcatctaaaaattagtctctgtgatcgctaatcttggcaatttacccttgcattgtttaatcatt 11239  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11240 taaaatttcgtcctttgaccaacttaatcactgccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtc 11325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 183; Significance: 4e-99; HSPs: 115)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 20 - 250
Target Start/End: Original strand, 3469203 - 3469433
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    |||||||||||||||||  |||||||||||||| |||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  3469203 ttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcctggcaatttacccttgcattgtttaatcatttaa 3469302  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  3469303 aatttcgtcctttgaccaacttaatcacggccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatccattcgtgaaatga 3469402  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    ||||||||||| || |||||||||| |||||    
T  3469403 catttttacccctgtcttcatcttcttctca 3469433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 40788843 - 40788613
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||| |||||    
T  40788843 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttactcttgcattgtttaatcttttaa 40788744  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  40788743 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatccattcgtgaaatga 40788644  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    |||||||||||  | |||||||||| |||||    
T  40788643 catttttaccccagtcttcatcttcttctca 40788613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 52032138 - 52032372
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    ||||||||||||||||| || ||||||||||||||| |||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||    
T  52032138 ggtttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattaatccttgtaatcgctaatcctagcaatttacccttgcattgtttaatcatt 52032237  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaa 216  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||| |||    
T  52032238 taaaatttcgtcctttgaccaacttaatcactaccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcgtcattcattcgtgaaa 52032337  T
Q  217 tgacatttttacccat-gacttcatcttcatctca 250  Q
    |||||||||||||| | | |||||||||| |||||    
T  52032338 tgacatttttacccctggtcttcatcttcttctca 52032372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 21 - 230
Target Start/End: Complemental strand, 29118960 - 29118751
Alignment:
Q  21 taatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaa 120  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||  ||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  29118960 taatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaatcctggcaatttaccattgcattgtttaatcatttaaa 29118861  T
Q  121 atttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatgac 220  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||    
T  29118860 atttcgtcctttgaccaacttaatcactgccacgtcatcacattagcaaaatggcatgggaatagacaaaaataccctcgtcatccattcgtgaaatgac 29118761  T
Q  221 atttttaccc 230  Q
    ||||||||||    
T  29118760 atttttaccc 29118751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 20 - 250
Target Start/End: Original strand, 11910702 - 11910932
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||| ||| |||||||||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||||    
T  11910702 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaa 11910801  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||    
T  11910802 aatttcgtcctttgaccaacttaatcactaccacgttatcaaattagcaaaatggcatgggaatggacaaaaatatcatcgtcatccattcgtgaaatga 11910901  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    ||||||||||| || |||||||||| |||||    
T  11910902 catttttacccctgtcttcatcttcttctca 11910932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 20 - 250
Target Start/End: Original strand, 29685944 - 29686174
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    |||||||||| |||||| ||||||||||||||| |||||||||||||||| ||||||||||||| ||| ||||||| |||||||||||||||||||||||    
T  29685944 ttaatgatgtatttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttatccttgcattgtttaatcatttaa 29686043  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||    
T  29686044 aatttcgttctttgaccaacttgatcactgccacgtcatcaaattagcaaaatggcatgggaatggagaaaaataccctcgtcatccattcgtgaaatga 29686143  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    |||||||| || || |||||||||| |||||    
T  29686144 catttttatccctgtcttcatcttcttctca 29686174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 20 - 228
Target Start/End: Original strand, 47551496 - 47551704
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| |||||||||||  || |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  47551496 ttaatgatgtgtttcgtccttgcaattagatgtcatttaaaaattagtccctgtaatcgctaatactggcaatttacccttgcattgtttaatcatttaa 47551595  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||| ||||||    
T  47551596 aatttcatcctttgaccaacttaatcactgccacatcatcaaattagcaaaatggcatggaaatggacaaaattaccctcgtcatccattcgtgaaatga 47551695  T
Q  220 catttttac 228  Q
    |||||||||    
T  47551696 catttttac 47551704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 20 - 244
Target Start/End: Original strand, 32306427 - 32306651
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||| | |||||||||||||  || |||||||||||||||||||||||||||||||    
T  32306427 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcatgtaatcgctaatcttgacaatttacccttgcattgtttaatcatttaa 32306526  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||| |||||||||||| ||||||||||||||||| ||||||    
T  32306527 aatttcgtcctttgaccaacttaatcactaccacgtcatcaaattagcaaaatgacttgggaatggacaaaaatatcctcgtcatccattcgtgaaatga 32306626  T
Q  220 catttttacccatgacttcatcttc 244  Q
     |||||||||  || ||||||||||    
T  32306627 tatttttaccgctgtcttcatcttc 32306651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 20 - 227
Target Start/End: Complemental strand, 37778696 - 37778489
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||    
T  37778696 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcatttaa 37778597  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||| |||||||||| || ||||||    
T  37778596 aatttcatcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgagaatagacaaaaatacccttgtcatccatttgtgaaatga 37778497  T
Q  220 cattttta 227  Q
    | ||||||    
T  37778496 ctttttta 37778489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 20 - 199
Target Start/End: Original strand, 13948783 - 13948962
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  13948783 ttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaa 13948882  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||    
T  13948883 aatttcgtcctttgaccaacttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 13948962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 3469623 - 3469441
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3469623 ttaatgatctgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 3469524  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3469523 aattccgtcctttgaccaacttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtc 3469441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 31 - 201
Target Start/End: Original strand, 35643865 - 35644035
Alignment:
Q  31 tttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcct 130  Q
    |||||| ||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  35643865 tttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccgtgcattgtttaatcatttaaaatttcgtcct 35643964  T
Q  131 ttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgt 201  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35643965 ttgacaaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgt 35644035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 32306847 - 32306669
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32306847 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 32306748  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccct 198  Q
    ||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||||||||||||    
T  32306747 aatttcgtcatttgaccaacttaatcactaccaagtcatcaaattagcaaaatggcataggaatggacaaaaataccct 32306669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 52032562 - 52032380
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||| ||| |||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  52032562 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaatatacccttgcattgtttaatcatttaa 52032463  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||| |||||||||||||||||||||  ||| |||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  52032462 aatttcttcctttgaccaacttaatcaccaccaagtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcgtc 52032380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 41421966 - 41422156
Alignment:
Q  11 ttttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgttta 110  Q
    ||||| |||||||||||||||||||| ||||||||||||||| | |||||||||||| | |||||||| ||||  || |||||||||||| |||||||||    
T  41421966 tttttaggtttaatgatgtgtttcgtccttgcaattaggcgtcagttaaaaattagttcctgtaatcgttaatcttgacaatttacccttacattgttta 41422065  T
Q  111 atcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgt 201  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  41422066 atcatttaaaatttcgtcatttgaccaacttaatcactgtcacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcgt 41422156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 3596109 - 3596294
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||  ||||||||||||| ||| ||||||||| ||||||| ||||||||||    
T  3596109 ggtttaatgatgtgtttcgtccttgcaattaggcgtgatttaaaaattagtcaatgtaatcgctaatcctgacaatttacctttgcattatttaatcatt 3596208  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||| || |||||||||||||| |||||    
T  3596209 taaaatttcgttctttgaccaacttaatcactaccatgtcatcaaattagcaaaatggcatgagaatggacaaaaataccttcgtc 3596294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 20 - 250
Target Start/End: Original strand, 10294570 - 10294793
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| ||||||  || ||||||||||||| |||||||||||||||||    
T  10294570 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcatgacaatttacccttgtattgtttaatcatttaa 10294669  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    ||||||||||||| |||||||||||      ||||||||||||||||||||||| ||||| | || |||||||||||||| |||| ||||||| ||||||    
T  10294670 aatttcgtcctttaaccaacttaat------cacgtcatcaaattagcaaaatgacatggaaatgtacaaaaataccctcatcat-cattcgtgaaatga 10294762  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    ||||||||||| || |||||||||| |||||    
T  10294763 catttttacccctgtcttcatcttcttctca 10294793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 29118530 - 29118723
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttaccctt-----------gcattgtt 108  Q
    ||||||||||||||||| |||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||           ||||||||    
T  29118530 ttaatgatgtgtttcgtccttgcaattatgcgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacccttgcattgtccttgcattgtt 29118629  T
Q  109 taatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29118630 taatcatttaaaatttcgtcctttgaccaacttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtc 29118723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 29686363 - 29686182
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  29686363 ttaatgatgtgtttcgtccttgcaattaggcgtcattttaaaattagtcattgtaatcactaatcctggcaatttacccttgcattgtttaatcatttaa 29686264  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||| ||| ||||||||||||||||||| ||| ||||| |||||||||||||||||||| | ||||||||||||||||||||    
T  29686263 aattttgtcatttgaccaacttaatcactaccaagtcat-aaattagcaaaatggcatggaaatggacaaaaataccctcgtc 29686182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 20 - 199
Target Start/End: Original strand, 40788423 - 40788602
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||| | |||||||||| ||||||||||||||||||||| | ||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  40788423 ttaatgatgtgtttcttccttgcaattaagcgttatttaaaaattagtccctctaatcgctaattctgacaatttacctttgcattatttaatcatttaa 40788522  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    ||||||||| ||||| ||||||||||||| |||  ||||||||||||||||||||||||||| |||||||||||||||||    
T  40788523 aatttcgtcatttgatcaacttaatcactaccaaatcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 40788602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 10294982 - 10294801
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| |||||||| || ||| |||||||||||||| | ||||||||||||| || ||||||||||||||||||||||||||||||||    
T  10294982 ttaatgatgtgtttcgtccttgcaatcagacgtaatttaaaaattagttcctgtaatcgctaatcctcgcaatttacccttgcattgtttaatcatttaa 10294883  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||  ||||||||||||||||||||||| |||||||||||| | ||||||||||||| ||||||||||||||||||||    
T  10294882 aatttcgttttttgaccaacttaatcactgccaagtcatcaaatta-ccaaatggcatgggaatggacaaaaataccctcgtc 10294801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 43998145 - 43998330
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||||| ||||||| |  ||| ||||| | || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43998145 ggtttaatgacgtgtttcatcattgtaattatgtgtcatttaaaaattagtccttgtaatcgttaattctggcaatttacccttgcattgtttaatcatt 43998244  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||||||||| ||||||||||||||||||| ||| ||||||||||| |||||||||||||||| ||| |||||||| |||||||    
T  43998245 taaaatttcgtcatttgaccaacttaatcactaccaagtcatcaaattcgcaaaatggcatgggaatggtcaaaaatatcctcgtc 43998330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 54 - 202
Target Start/End: Complemental strand, 10307764 - 10307616
Alignment:
Q  54 atttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  10307764 atttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactcgcac 10307665  T
Q  154 gtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||    
T  10307664 gtcataaaattagcaaaattgcatgggaatggacaaaaataccctcgtc 10307616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 33506373 - 33506252
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||| ||||||||||||||||||    
T  33506373 ttaatgatgtgtttcgtcctttcaattaggcgttatttaaaaattagtccctgtaatcgctaatcctggcaatttactcttacattgtttaatcatttaa 33506274  T
Q  120 aatttcgtcctttgaccaactt 141  Q
    ||||| ||||||||||||||||    
T  33506273 aattttgtcctttgaccaactt 33506252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 33156422 - 33156282
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| ||||  ||||||||||||||| |||||||||||||||    
T  33156422 ggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcattgtaatcgttaatcttggcaatttaccctttcattgtttaatcatt 33156323  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||| |   || ||||||||||||||||||||    
T  33156322 taaaatttcgtccctccccccacttaatcactgccacgtca 33156282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 197
Target Start/End: Complemental strand, 42855739 - 42855553
Alignment:
Q  11 ttttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgttta 110  Q
    |||||||| |||||||||||||| |  ||||||||||||||| |||||||||||||||| |||| |||||||| || ||||  || ||||||||| ||||    
T  42855739 ttttttggcttaatgatgtgtttagcccttgcaattaggcgtcatttaaaaattagtccatgtattcgctaatccttgcaaactagccttgcattcttta 42855640  T
Q  111 atcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||| |||||||||    |||||||||| ||  ||||||||||||||||||||| |||||  ||| ||||||||||    
T  42855639 atcatttaaaatttcatcctttgactcggttaatcactgtcagatcatcaaattagcaaaatggcttgggaaaggataaaaataccc 42855553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 3596422 - 3596309
Alignment:
Q  130 tttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatgacatttttacc 229  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||    
T  3596422 tttgaccaacttaatcactgtcacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcgtcatgcattcgtgaaatgacatttttacc 3596323  T
Q  230 catgacttcatctt 243  Q
    | || |||||||||    
T  3596322 cctgtcttcatctt 3596309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 9368728 - 9368547
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||| |||| |||||| |||||||||||| ||  |||||||||| |||| |||||||  |||| || |||| |||| ||| |||||||||||||||    
T  9368728 ggtttaat-atgtatttcgtccttgcaattaggggtcgtttaaaaattggtccctgtaatcattaatccttgcaaattactcttacattgtttaatcatt 9368630  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    ||||||||||| | || ||| ||||||| | |||||||||||||||||| |||||||||||| || |||||||||||||||||    
T  9368629 taaaatttcgttccttaacccacttaatgattgccacgtcatcaaattaacaaaatggcatgagaatggacaaaaataccctc 9368547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 10770485 - 10770626
Alignment:
Q  12 tttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaa 111  Q
    |||| |||||||||||||| || || ||||||||||||||| ||||||||||| |||| |||||| |||||| ||||||||||| ||||||| |  ||||    
T  10770485 ttttaggtttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaa 10770584  T
Q  112 tcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    ||||||||||||| |||||| |||||||||||||||||||||    
T  10770585 tcatttaaaatttggtccttggaccaacttaatcactgccac 10770626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 36314301 - 36314438
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || ||||||||||||||| ||||||||||| |||| |||||| |||||| ||||||||||| ||||||| |  ||||||||||||    
T  36314301 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 36314400  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  36314401 aatttggtccttggaccaacttaatcactgccacgtca 36314438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 197
Target Start/End: Complemental strand, 47857664 - 47857493
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| | || ||||||| ||  ||||||||||  || ||||||||| ||||||||| || ||| |||||||  ||||||||||||||||||||    
T  47857664 atgtgtttcgtccctgtaattaggtgtcgtttaaaaattgatctttgtaatcgttaattctggtaaattatccttgcaaagtttaatcatttaaaatttc 47857565  T
Q  126 gtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||| ||||||||||||||||| ||||||||||| ||||||||||||| |||| |||  ||||||| ||||||    
T  47857564 gtcatttgaccaacttaatcaatgccacgtcataaaattagcaaaatagcataggaaaggacaaatataccc 47857493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 4322595 - 4322772
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    |||||||||||||||   | |||||||||||||  |||||||||| ||||| |||||||||||| ||| ||| ||| |||||||||||||||||||||||    
T  4322595 ttaatgatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtcct-gtaatcgctaatcctgacaaattaaccttgcattgtttaatcatttaa 4322693  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccct 198  Q
    || ||||||| |  ||| ||||||  |||||||| ||||||||||| |||||| |||||||| ||||||||||| ||||    
T  4322694 aaattcgtccctgaacccacttaaagactgccacatcatcaaattaacaaaatagcatgggaatggacaaaaatgccct 4322772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 206
Target Start/End: Original strand, 6956257 - 6956438
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| | ||||||||||  | |||||||||||||||| | |||||| |||| ||||||| |||||||||||   || ||||||||||||||||    
T  6956257 atgtgtttcgtccctgcaattagggatcatttaaaaattagtccctataatcgttaatcctggcaaattacccttgcaaacttaaatcatttaaaatttc 6956356  T
Q  126 gtcctttgaccaac-ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatcc 206  Q
    |||| |  ||| || ||||| ||||||||||||| |||||| ||||||| ||||||| ||||||||||||||||| ||||||    
T  6956357 gtccctacacccactttaattactgccacgtcataaaattaacaaaatgacatgggaatggacaaaaataccctcatcatcc 6956438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 2796200 - 2796316
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| || ||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |   ||     
T  2796200 cttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccc 2796299  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  2796300 acttaatcactgccacg 2796316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 51994293 - 51994174
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||||  |  |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |   ||     
T  51994293 cttgcaattagggatcgtttaaaaattggtccttgtaatcgctaattctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctcccc 51994194  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  51994193 acttaatcactgccacgtca 51994174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 48322380 - 48322517
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || ||||||||||| | | ||||||||||| |||| |||||| |||||| ||||||||||| ||||||| |  ||||||||||||    
T  48322380 ttaatgatgtgattagtccttgcaattagacatcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 48322479  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  48322480 aatttggtccttggaccaacttaatcactgccacgtca 48322517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 4323630 - 4323482
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    ||||||| ||||||||||   | |||||||||||||  |||||||||| |||| ||||||||||||| ||||||| ||| ||||||||||||||||||||    
T  4323630 ggtttaaggatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcatt 4323531  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaatta 165  Q
    ||||| ||||||  |  ||| ||||||| ||||||||||||||||||||    
T  4323530 taaaaattcgtcactgaacccacttaatgactgccacgtcatcaaatta 4323482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 47856396 - 47856547
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| | |||||||| ||||  |||||||||| ||||||||||||| |||| ||| ||| |||| ||||||  |||||||||||||||||||     
T  47856396 atgtgtttcgtccctgcaattaagcgtcgtttaaaaattggtccttgtaatcgttaatcctgacaaattactcttgcaaagtttaatcatttaaaatttt 47856495  T
Q  126 gtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcat 177  Q
    ||| ||||||||||||||||| |  |||||||| ||||||||||||| ||||    
T  47856496 gtcatttgaccaacttaatcaatttcacgtcattaaattagcaaaatagcat 47856547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 39 - 157
Target Start/End: Complemental strand, 33689785 - 33689667
Alignment:
Q  39 ttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaa 138  Q
    ||||||||||| ||  |||||||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |   || |    
T  33689785 ttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacccttgcattatttaatcatttaaaatttcgtccctctcccca 33689686  T
Q  139 cttaatcactgccacgtca 157  Q
    |||||||||||||||||||    
T  33689685 cttaatcactgccacgtca 33689667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 250
Target Start/End: Complemental strand, 43998434 - 43998338
Alignment:
Q  154 gtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatgacatttttacccatgacttcatcttcatctca 250  Q
    |||||||||||||||||||| |||| || |||||||||||| ||||||||| ||||||| |||||||||||||||||||| |||||||||| |||||    
T  43998434 gtcatcaaattagcaaaatgccatgagaatggacaaaaatatcctcgtcattcattcgtgaaatgacatttttacccatgtcttcatcttcttctca 43998338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 9294365 - 9294274
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||||| ||  |||||||||| |||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9294365 cttgcaattaggggtcgtttaaaaattggtccctataatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 9294274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 10770888 - 10770751
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||||||||| || || ||| ||||||||||| ||||||||||| |||| |||||| | |||| ||||||||||| ||||||| |  |||||||||    
T  10770888 ggtttaatgatgtgattagtccttacaattaggcgtcatttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatt 10770789  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    ||||||||||||| |   || |||||||||||||||||    
T  10770788 taaaatttcgtccctctccccacttaatcactgccacg 10770751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 206
Target Start/End: Original strand, 1078546 - 1078725
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||| |||||| | |||||||||| || ||||||||||| |||| |||||||| |||| |||| || ||| ||||| |  ||||||||||||||||||||    
T  1078546 atgtttttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgttaat-ctggtaaattaaccttgtaaagtttaatcatttaaaatttc 1078644  T
Q  126 gtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatcc 206  Q
    |||| |  ||| | ||||| | || || |||||||||||||||| |||||| |||| ||||||||||||| ||| ||||||    
T  1078645 gtccctacacccatttaattattgtcatgtcatcaaattagcaagatggcacgggaatggacaaaaatactctcatcatcc 1078725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 19741299 - 19741183
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||  |   ||     
T  19741299 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccttgtattgtttaatcatttaaaatttcgtcactctcccc 19741200  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  19741199 acttaatcactgccacg 19741183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 157
Target Start/End: Complemental strand, 21186114 - 21185983
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||||||| || | |||||||||| || ||||||||||| || | |||||||| |||| ||||||| |||||||||||    ||||||||||||||||||    
T  21186114 atgtgttttgtccatgcaattaggggtcatttaaaaattggtacatgtaatcgttaatcctggcaaattacccttgcaaaccttaatcatttaaaatttc 21186015  T
Q  126 gtcctttgaccaacttaatcactgccacgtca 157  Q
    |||| |||||| |||||||||| |||||||||    
T  21186014 gtcccttgacccacttaatcaccgccacgtca 21185983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 23458000 - 23458119
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||| | ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||||||||||||||||    
T  23458000 cttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaataattaatcatttaaaatttcgtcctttgacca 23458099  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  23458100 acttaatcactgccacgtca 23458119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 23458386 - 23458271
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||| | ||  |||||||||| |||  ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |   ||     
T  23458386 cttgcaattatgggtcgtttaaaaattggtctctgtaatcgctaatccttgcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccc 23458287  T
Q  138 acttaatcactgccac 153  Q
    ||||||||||||||||    
T  23458286 acttaatcactgccac 23458271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 32716340 - 32716431
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    |||| ||||||||||||||||| |   |||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  32716340 ttaaccatttaaaatttcgtccctcttccagattaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 32716431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 154
Target Start/End: Complemental strand, 36314697 - 36314558
Alignment:
Q  15 ttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatca 114  Q
    |||| ||||||||||| || || |||||||||||||||  |||||||||| |||| |||||| | |||| ||||||||||| ||||||| |  |||||||    
T  36314697 ttggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatca 36314598  T
Q  115 tttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    ||||||||||||||| |   || |||||||||||||||||    
T  36314597 tttaaaatttcgtccctctccccacttaatcactgccacg 36314558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 48322771 - 48322637
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || |||||||||||||||  |||||||||| |||| |||||| | |||| ||||||||||| ||||||| |  ||||||||||||    
T  48322771 ttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaa 48322672  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |   || |||||||||||||||||    
T  48322671 aatttcgtccctctccccacttaatcactgccacg 48322637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 54466822 - 54466680
Alignment:
Q  15 ttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatca 114  Q
    |||||||| |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| | |||| |||||| |||| || |||| |  ||||||     
T  54466822 ttggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattggtaatcctggcattttaaccctgcaattgttaatcg 54466723  T
Q  115 tttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||||| |||||| |||||| ||||||||||||||||||    
T  54466722 tttaaaatttggtccttggaccaaattaatcactgccacgtca 54466680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 43384321 - 43384394
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 128  Q
    |||||||||| |||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  43384321 tttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtc 43384394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 204
Target Start/End: Complemental strand, 43608896 - 43608723
Alignment:
Q  31 tttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcct 130  Q
    |||||| | ||||||||||  | ||||||||||| |||  |||||||| |||| || | || ||| |||||||  ||||||||||||||||||||||||     
T  43608896 tttcgtccctgcaattagggatcatttaaaaattggtctctgtaatcgttaatcctcgtaaattaaccttgcaaagtttaatcatttaaaatttcgtccc 43608797  T
Q  131 ttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcat 204  Q
    |  ||| | ||||| ||||| |  ||||||||||||||| ||||||||| | ||||||||||||||||| ||||    
T  43608796 tacacctatttaattactgctatatcatcaaattagcaagatggcatggaaatggacaaaaataccctcatcat 43608723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 33689403 - 33689521
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| ||| | ||| ||||||||||| ||||  || ||||||| |  ||||||||||||||||| ||||||||||||    
T  33689403 cttgcaattaggggtcgtttaaaaattggtcat-gtattcgctaattcttgcaaactagccttgcaatcattaatcatttaaaattttgtcctttgacca 33689501  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  33689502 acttaatcactgccacgtca 33689521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 40758517 - 40758402
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| || ||||||||||| |||  |||| |||||||| || ||||  ||  |||||| |  ||||||||||||||||||||||||||||||    
T  40758517 cttgcaattaggggtcatttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctttgacca 40758418  T
Q  138 acttaatcactgccac 153  Q
    ||||||||||||||||    
T  40758417 acttaatcactgccac 40758402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 42342816 - 42342903
Alignment:
Q  42 caattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||| ||  |||||||||| |||| |||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  42342816 caattaggggtcgtttaaaaattggtccatgtaattgctagtcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 42342903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 250
Target Start/End: Complemental strand, 13949047 - 13948973
Alignment:
Q  176 atgggagtggacaaaaataccctcgtcatccattcgtaaaatgacatttttacccatgacttcatcttcatctca 250  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||| |||||    
T  13949047 atgggaatggacaaaaataccctcgtcatccattcgtgaaatgacatttttacccttgtcttcatcttcttctca 13948973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 19740961 - 19741063
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |||| ||||||||||||| || ||||  || ||||||| |  ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  19740961 tttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaatttaatcattgccacg 19741060  T
Q  155 tca 157  Q
    |||    
T  19741061 tca 19741063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 189
Target Start/End: Complemental strand, 41558287 - 41558138
Alignment:
Q  40 tgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaac 139  Q
    |||||||||| ||  ||||||||||| ||| |||| |||||||| || |||| |||  |||||| |  ||||||||||||||||||||||||   || |     
T  41558287 tgcaattaggggtcgtttaaaaattaatccatgtattcgctaatccttgcaaattagtcttgcaatcattaatcatttaaaatttcgtccttgagcccag 41558188  T
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaa 189  Q
    ||||| |||||||| ||||||||||| |||||||| |||||| |||||||    
T  41558187 ttaattactgccacatcatcaaattatcaaaatggtatgggaatggacaa 41558138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 152
Target Start/End: Original strand, 46474837 - 46474950
Alignment:
Q  39 ttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaa 138  Q
    ||||||||||| ||  |||||||||| |||  |||||||||||||  |||||||||||| |||||||||||||||||||||||||| |||| |   || |    
T  46474837 ttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcttggcaatttaccattgcattgtttaatcatttaaaattttgtccctctcccca 46474936  T
Q  139 cttaatcactgcca 152  Q
    ||||||||||||||    
T  46474937 cttaatcactgcca 46474950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 8042013 - 8041873
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||| |||||||||| |  ||||||||||||||  ||||||| ||| |||| |||||| |||||| |||||| |||| || |||| |  |||||| ||    
T  8042013 ggtttattgatgtgtttagcccttgcaattaggcggcatttaaatattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 8041914  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||| |||||| || ||| ||||||||||||||||||    
T  8041913 taaaatttggtccttggaacaaattaatcactgccacgtca 8041873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 40758168 - 40758284
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| ||||||||||||| ||| ||||||||||  ||||||||||||||||||||||||||||| |   ||     
T  40758168 cttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcctg-caatttaccc--gcattgtttaatcatttaaaatttcgtccctctcccc 40758264  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||| ||||||||    
T  40758265 acttaatcactaccacgtca 40758284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 26463632 - 26463767
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||  |||| |||| | |||||||||| | ||  ||||||||||  |||||||| ||| |||| || |||| |||  |||||| |  |||||||||    
T  26463632 ggtttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattgatccttgtattcggtaatccttgcaaattagtcttgcaatcattaatcatt 26463731  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgcca 152  Q
    ||||||||||||||||||||||||||||||||||||    
T  26463732 taaaatttcgtcctttgaccaacttaatcactgcca 26463767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 33506181 - 33506252
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaa 91  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||| | | |||||||||||||||||||    
T  33506181 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctataatcgctaattctggcaa 33506252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 36418095 - 36417976
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||| ||||||| ||  |||||||||| || | |||| |||||||| || ||||  || ||||||| |  |||||||||||||||||||||||||||| |    
T  36418095 cttgtaattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacaa 36417996  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  36417995 acttaatcactgccacgtca 36417976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 157
Target Start/End: Complemental strand, 53757142 - 53757011
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||| |||| |||||||||||||  ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||||    
T  53757142 atgtatttcattcttgcaattagaagtcgtttaaaaattggtccatgtattcgctaatccttgcaaactaaccttgcaatcattaatcatttaaaatttc 53757043  T
Q  126 gtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||| ||||||||||||||| || |||||    
T  53757042 gtcctttaaccaacttaatcactaccgcgtca 53757011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 8041623 - 8041753
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  ||||||||||||||||    
T  8041623 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatt 8041722  T
Q  124 tcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||| |   || |||||||||||||||||    
T  8041723 tcgtccctctccccacttaatcactgccacg 8041753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 157
Target Start/End: Complemental strand, 46475155 - 46475069
Alignment:
Q  71 tgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46475155 tgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 46475069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 54466418 - 54466560
Alignment:
Q  12 tttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaa 111  Q
    |||| |||||| |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| | |||| |||||| |||| || |||| |  ||||    
T  54466418 ttttaggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcattttaaccctgcaattgttaa 54466517  T
Q  112 tcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||||||||||| |   || |||||||||||||||||    
T  54466518 tcatttaaaatttcgtccctctccccacttaatcactgccacg 54466560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 2944036 - 2944093
Alignment:
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  2944036 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 2944093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 197
Target Start/End: Complemental strand, 32717114 - 32717025
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||||||||||||||||| |   || | ||||| |||||||||||||||||||||||||||| ||| ||| |||||||||||||||    
T  32717114 ttaatcatttaaaatttcgtccctcttcccaattaattactgccacgtcatcaaattagcaaaatgacataggaatggacaaaaataccc 32717025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 147
Target Start/End: Original strand, 36417685 - 36417818
Alignment:
Q  14 tttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatc 113  Q
    ||||||||||  |||| |||| | |||| ||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  ||||||    
T  36417685 tttggtttaaacatgtctttcatccttgtaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatc 36417784  T
Q  114 atttaaaatttcgtcctttgaccaacttaatcac 147  Q
    |||||||||||||||||||||| |||||||||||    
T  36417785 atttaaaatttcgtcctttgacaaacttaatcac 36417818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 1756674 - 1756730
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  1756674 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 1756730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 2944642 - 2944586
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  2944642 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 2944586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 37249774 - 37249718
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  37249774 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 37249718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 45278668 - 45278724
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  45278668 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 45278724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 45279260 - 45279204
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  45279260 taatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 45279204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 48189075 - 48189019
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  48189075 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 48189019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 1079640 - 1079537
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||| | | |||||||||| || ||||||||||| |||| |||||||| |||| ||||||| ||| |||||||  |||||||| |||||||||||    
T  1079640 atgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatcttttaaaatttc 1079541  T
Q  126 gtcc 129  Q
    ||||    
T  1079540 gtcc 1079537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 11026607 - 11026552
Alignment:
Q  142 aatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  11026607 aatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 11026552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 40033863 - 40033772
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||||| ||  |||||||||| ||   | |||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  40033863 cttgcaattaggggtcgtttaaaaattggtttctataattgctaatcctggcaatttacccttgcattgtttaatcatttaaaattttgtcc 40033772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 55052654 - 55052564
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||| ||||||| ||| |||||||||| |||| |||||||| ||||  ||||||||||||  ||||||||||||||||||||||||||||||    
T  55052654 cttgtaattaggggtt-tttaaaaattggtccatgtaatcgttaatcatggcaatttacctctgcattgtttaatcatttaaaatttcgtcc 55052564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 13949125 - 13949063
Alignment:
Q  13 ttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaa 75  Q
    |||||| ||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||    
T  13949125 ttttggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcttgtaa 13949063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 42343121 - 42343023
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    ||||||||||  ||| |||| ||||||||  | |||| |||  |||||| || ||||||||||||||||||||||||||||||||||||||| ||||||    
T  42343121 tttaaaaattgatccatgtattcgctaatctttgcaaattagtcttgcaatgattaatcatttaaaatttcgtcctttgaccaacttaatcagtgccac 42343023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 29192970 - 29192905
Alignment:
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatc 205  Q
    |||||||||| ||||||||||||||||||||||| ||||||| | ||||||||||||||| |||||    
T  29192970 ttaatcactgtcacgtcatcaaattagcaaaatgacatgggaattgacaaaaataccctcatcatc 29192905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 43105357 - 43105414
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccct 198  Q
    |||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||    
T  43105357 taatcactgccatgtcatcaaattagcaaaatggcatgggaattgacaaaaataccct 43105414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 43384616 - 43384571
Alignment:
Q  112 tcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  43384616 tcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 43384571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 55052370 - 55052419
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  55052370 ttaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtca 55052419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 1757280 - 1757224
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||||||||||||||||||||||||||||||||| || | |||||||||||||    
T  1757280 taatcactgccacgtcatcaaattagcaaaatggcatgagaattgacaaaaataccc 1757224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 32431611 - 32431479
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||| |||||| | || ||||||| || ||||||||||| |||| || ||||| |||| ||| ||| ||| |||||||  |||||| |||||||||||||    
T  32431611 atgtatttcgtccctgtaattaggggtcatttaaaaattggtccctgcaatcgttaatcctgacaaattagccttgcaaagtttaaccatttaaaatttc 32431512  T
Q  126 gtcctttgaccaacttaatcactgccacgtcat 158  Q
    |||| ||||||  |||||| | |||||||||||    
T  32431511 gtcccttgacccgcttaatgattgccacgtcat 32431479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 37249323 - 37249379
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||| | | |||||||||||||    
T  37249323 taatcactgccacgtcatcaaattagcaaaatggcatggaaattgacaaaaataccc 37249379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 48188502 - 48188558
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||    
T  48188502 taatcactgccacgtcatcaaattagcaaaatgccatgggaattgacaaaaataccc 48188558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 29192126 - 29192217
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    |||||||||||||||||||||| |   ||   ||||||||||||||||||| |||||||||||||| |||| || | |||||||||||||||    
T  29192126 ttaatcatttaaaatttcgtccctcttcccgattaatcactgccacgtcattaaattagcaaaatgacatgagaattgacaaaaataccctc 29192217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 47921487 - 47921602
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||||||  ||||||||||| |||| |||||| | ||||  ||||| |||| || |||| |  |||||| |||||||||| |||||| |||||    
T  47921487 cttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcttggcattttaaccctgcaattgttaatcgtttaaaatttggtccttggacca 47921586  T
Q  138 acttaatcactgccac 153  Q
    | ||||||||||||||    
T  47921587 aattaatcactgccac 47921602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 53756766 - 53756856
Alignment:
Q  39 ttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    ||||||||||| ||  ||||||||||  | | |||||||| ||||  | | ||||||||||||||||||||||||||||||||||||||||    
T  53756766 ttgcaattaggggtcgtttaaaaattgattcatgtaatcgttaatcttagtaatttacccttgcattgtttaatcatttaaaatttcgtcc 53756856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 2796451 - 2796406
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  2796451 ttaatcagttaaaatttcgtcctttgaccaacttaatcactgccac 2796406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 9294049 - 9294098
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  9294049 ttaatcatttaaaattttgtcttttgaccaacttaatcactgccacgtca 9294098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 26463954 - 26463886
Alignment:
Q  89 caatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||| ||||||||||||||||||||||||||| |   || |||||||||||| |||||||    
T  26463954 caatttacccttgtattgtttaatcatttaaaatttcgtccctctccccacttaatcactgtcacgtca 26463886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 43105810 - 43105754
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||| |||||||||||||||||||||||||||| ||| | |||||||||||||    
T  43105810 taatcactaccacgtcatcaaattagcaaaatggcattggaattgacaaaaataccc 43105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 152
Target Start/End: Original strand, 51994042 - 51994086
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgcca 152  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  51994042 ttaatcatttaaaatttagtcctttgaccaacttaatcactgcca 51994086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 128
Target Start/End: Complemental strand, 40506195 - 40506104
Alignment:
Q  38 cttgcaatta-ggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 128  Q
    |||||||||| || || |||||||| || || | |||||||| |||| ||| |||||||||||| |||| ||||||||||||||||||||||    
T  40506195 cttgcaattatggggtcatttaaaagttggttcctgtaatcgttaatcctgacaatttacccttacattatttaatcatttaaaatttcgtc 40506104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 41988621 - 41988696
Alignment:
Q  54 atttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    ||||||||||| |||| |||| || |||||||| |||| |||| |||||||| |||||||||||||| ||||||||    
T  41988621 atttaaaaattggtccctgtattcactaattcttgcaaattactcttgcattctttaatcatttaaattttcgtcc 41988696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 33154865 - 33154979
Alignment:
Q  5 atataattttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcat 104  Q
    ||||| ||| |||| ||||  ||||||||||| | |||||||||| || ||||||||||| |||| |||||||| |||| ||| ||| ||| ||||| |     
T  33154865 atatattttattggcttaagtatgtgtttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctgacaaattatccttgtaa 33154964  T
Q  105 tgtttaatcatttaa 119  Q
     ||||||||||||||    
T  33154965 agtttaatcatttaa 33154979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 11026060 - 11026117
Alignment:
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||| ||||||||||||||||||| |||||| | | |||||||||||||    
T  11026060 ttaatcactgccatgtcatcaaattagcaaaatcgcatggaaattgacaaaaataccc 11026117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 149
Target Start/End: Original strand, 40033597 - 40033638
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 149  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  40033597 ttaatcatttaaaatttcgtcatttgaccaacttaatcactg 40033638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 35712111 - 35712163
Alignment:
Q  97 ccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactg 149  Q
    ||||||| |||||||||||||||||||||||| ||||||| | ||||||||||    
T  35712111 ccttgcaatgtttaatcatttaaaatttcgtcttttgacccagttaatcactg 35712163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 35759091 - 35759047
Alignment:
Q  155 tcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    |||||||||||||||||||||||| || |||||||||||||||||    
T  35759091 tcatcaaattagcaaaatggcatgagaatggacaaaaataccctc 35759047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 23276402 - 23276299
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||| | | |||||||||| || ||||||||||| |||| ||||||||||||| | ||||| |||||| | ||    |||||||||||||||||     
T  23276402 atgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcccggcaaattacccctacaaacgttaatcatttaaaatttt 23276303  T
Q  126 gtcc 129  Q
    ||||    
T  23276302 gtcc 23276299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 25107222 - 25107325
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||| | | |||||||||| || ||||||||||| |||  | ||||||||||| ||||||| || ||| ||||    ||||||||||||||||||    
T  25107222 atgtgtttcatccctgcaattaggggtcatttaaaaattggtctctctaatcgctaatcctggcaaattgcccctgcaaatgttaatcatttaaaatttc 25107321  T
Q  126 gtcc 129  Q
    ||||    
T  25107322 gtcc 25107325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 128
Target Start/End: Original strand, 41558017 - 41558119
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||| |||| |||||||||||| | ||  |||||||||| || |||||| |||||||| || |||  ||| ||||||| |  ||||||||||||||||||    
T  41558017 atgtatttcattcttgcaattatgggtcgtttaaaaattggtacttgtattcgctaatccttgcacattaaccttgcaattattaatcatttaaaatttc 41558116  T
Q  126 gtc 128  Q
    |||    
T  41558117 gtc 41558119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 3596486 - 3596434
Alignment:
Q  30 gtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaat 83  Q
    ||||||| ||||||||||||||| |||||||||||||| |||||||||| ||||    
T  3596486 gtttcgtccttgcaattaggcgtgatttaaaaattagt-cttgtaatcgttaat 3596434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 10307559 - 10307608
Alignment:
Q  201 tcatccattcgtaaaatgacatttttacccatgacttcatcttcatctca 250  Q
    |||||||||||| ||||||||||||||||| || |||||||||| |||||    
T  10307559 tcatccattcgtgaaatgacatttttacccctgtcttcatcttcttctca 10307608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 205
Target Start/End: Original strand, 44960257 - 44960364
Alignment:
Q  97 ccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaatacc 196  Q
    |||||||||||||||||||||||||||||  ||  | ||| ||||||| || | ||| ||||||||||| |||||||  |   || ||||||||||||||    
T  44960257 ccttgcattgtttaatcatttaaaatttc-acccctaacccacttaatgaccgtcacctcatcaaattaacaaaatgatacatgaatggacaaaaatacc 44960355  T
Q  197 ctcgtcatc 205  Q
    ||| |||||    
T  44960356 ctcatcatc 44960364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 21783899 - 21783813
Alignment:
Q  41 gcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgt 127  Q
    ||||||||| ||  ||||||||||||||||| || ||| |||| || ||| |||| || ||||   |||||||||||||||||||||    
T  21783899 gcaattaggggtcgtttaaaaattagtccttatattcgttaatccttgcattttatccctgcaaaatttaatcatttaaaatttcgt 21783813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 43607789 - 43607846
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaat 83  Q
    ||||||||||| | |||||||| |||| ||||||||||| |||| |||||||| ||||    
T  43607789 atgtgtttcgtccctgcaattaagcgtcatttaaaaattggtccctgtaatcgttaat 43607846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 183; Significance: 4e-99; HSPs: 86)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 8710891 - 8710661
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  8710891 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 8710792  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||    
T  8710791 aatttcgtcctttgaccaactttatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatcaattcgtgaaatga 8710692  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    ||||||||||| || |||||||||| |||||    
T  8710691 catttttacccctgtcttcatcttcttctca 8710661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 15604765 - 15604532
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    ||||||||||||||||| || |||||||||||| || ||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  15604765 ggtttaatgatgtgttttgtccttgcaattaggtgtcatttaaaaactagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 15604666  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaa 216  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  15604665 taaaatttcgtcctttgaccaacttaatcactgccccgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatccattcgtgaaa 15604566  T
Q  217 tgacatttttacccatgacttcatcttcatctca 250  Q
    |||||||||||||| || |||||||||| |||||    
T  15604565 tgacatttttacccctgccttcatcttcttctca 15604532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 20 - 250
Target Start/End: Original strand, 11830367 - 11830597
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||| ||| |||||||||||||||| |||||| |||||| ||  |||||||||||||||||||||||||||||||    
T  11830367 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaattgctaatcctaacaatttacccttgcattgtttaatcatttaa 11830466  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||    
T  11830467 aatttcgtcatttgacaaactcaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatccattcatgaaatga 11830566  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    |||||||| || |  |||||||||| |||||    
T  11830567 catttttatccctttcttcatcttcttctca 11830597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 20 - 199
Target Start/End: Original strand, 15604342 - 15604521
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| |||||||||||| || |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15604342 ttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 15604441  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    ||||||||||||||| ||||||||||||| ||| ||||| |||||||||||||||||||||| |||||||||||||||||    
T  15604442 aatttcgtcctttgatcaacttaatcactaccaagtcatgaaattagcaaaatggcatgggaatggacaaaaataccctc 15604521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 20 - 253
Target Start/End: Original strand, 41587238 - 41587470
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| |||||||||| | || ||||||||||| ||||| ||||||| |||| |||| || |||||||||||||||||||||||||||    
T  41587238 ttaatgatgtgtttcgtccttgcaattaagagtcatttaaaaattggtcct-gtaatcgttaatcctggaaaattacccttgcattgtttaatcatttaa 41587336  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    |||||| |||||| |||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||| || |||||||||| | ||||||    
T  41587337 aatttcatcctttaaccaacttaatcactgtcacgtcatcaaattagcaaaattgcatgggaatggacaaaaataccgtcatcatccattcatgaaatga 41587436  T
Q  220 catttttacccatgacttcatcttcatctcactc 253  Q
     |||||||||| || |||||||||| ||||||||    
T  41587437 tatttttacccctgtcttcatcttcttctcactc 41587470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 181
Target Start/End: Complemental strand, 28226178 - 28226006
Alignment:
Q  9 aattttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtt 108  Q
    ||||| |||| ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  28226178 aatttcttggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtt 28226079  T
Q  109 taatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatggga 181  Q
    ||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  28226078 taatcatttaaaatttcgtactttgaccaacttaatcactaccaagtcatcaaattagcaaaatggcatggga 28226006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 41588481 - 41588299
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||| ||||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  41588481 ttaataatgtgtttcgtccttacaattaggcgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacacttacattgtttaatcatttaa 41588382  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| | | ||||||||||||||||||    
T  41588381 aatttcatcctttgaccaacttaatcactgccaagtcatcaaattagcaaaatggcatggaaattgacaaaaataccctcgtc 41588299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 8342187 - 8342372
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||||||||||||||| |||||||||| |||| |||||||||||||||  |||||| | |||| ||||||||||| ||||||||||||||||||||    
T  8342187 ggtttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtctatgtaattggtaatcctggcaatttatccttgcattgtttaatcatt 8342286  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  8342287 taaaatttcgtcctttgaccaacttaatcactaccaagtcatcaaattagcaaaatggcatgggaattgacaaaaataccctcgtc 8342372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 8342605 - 8342386
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||||||||||  |||||||  |||| ||| |||||||||||||||||||||||| |||    
T  8342605 ggtttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcaataatcctgacaatttacccttgcattgtttaattatt 8342506  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaa 216  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||        |||||||||| |||||||||||| ||| |||||| ||| ||||||    
T  8342505 taaaatttcgtcctttgaacaacttaatcactgccgcgtcatcaaat--------tggcatgggaatggacaaaaataaccttgtcatctatttgtaaaa 8342414  T
Q  217 tgacatttttacccatgacttcatcttc 244  Q
    |||||||||||||| || |||| |||||    
T  8342413 tgacatttttacccctgtcttcttcttc 8342386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 26 - 197
Target Start/End: Complemental strand, 39936665 - 39936495
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| | |||||||||||||  ||||||| || ||||||||||||| |||| ||||||| |||||||||||  ||||||||||||||||||||    
T  39936665 atgtgtttcgtccctgcaattaggcgtggtttaaaa-ttggtccttgtaatcgttaatcctggcaaattacccttgcaaagtttaatcatttaaaatttc 39936567  T
Q  126 gtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |  ||||||||||||||    
T  39936566 gtcctttgaccaatttaatcaatgccacgtcatcaaattagcaaaatggcatggaaaaggacaaaaataccc 39936495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 6588682 - 6588865
Alignment:
Q  16 tggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcat 115  Q
    ||||||||  |||| |||| | |||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||||| |||||||||    
T  6588682 tggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcattctttaatcat 6588781  T
Q  116 ttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    ||||||||||||||||||||| | || |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  6588782 ttaaaatttcgtcctttgacccagttgatcactgccaggtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 6588865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 26 - 206
Target Start/End: Complemental strand, 202775 - 202595
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||||||| || | || ||||||| || ||||||||||| |||| |||||||| |||| ||||||| ||| |||||||  ||||||||||||||||||||    
T  202775 atgtgttttgtccctgtaattaggggtcatttaaaaattcgtccatgtaatcgttaatcctggcaaattagccttgcagagtttaatcatttaaaatttc 202676  T
Q  126 gtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatcc 206  Q
    |||| |  ||| ||||||| ||| |||||| |||||||||||||||||||||| || | |||||||||||| || ||||||    
T  202675 gtccctacacccacttaattactcccacgttatcaaattagcaaaatggcatgagaatagacaaaaataccttcatcatcc 202595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 6573047 - 6573158
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||||||||||||||| | ||||||||||||| ||||||||||| |||| |||||||||||||  |||||||||| ||||||||||||||||||||    
T  6573047 ggtttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaatttgtccatgtaatcgctaatcttggcaattta-ccttgcattgtttaatcatt 6573145  T
Q  117 taaaatttcgtcc 129  Q
    ||||| |||||||    
T  6573146 taaaaattcgtcc 6573158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 15848109 - 15848228
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |   ||     
T  15848109 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccc 15848208  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  15848209 acttaatcactgccacgtca 15848228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 44714168 - 44714049
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |   ||     
T  44714168 cttgcaattaggggtcgtttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccc 44714069  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||| ||||    
T  44714068 acttaatcactgccatgtca 44714049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 16099074 - 16099192
Alignment:
Q  36 ttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgac 135  Q
    |||||||||||||| || ||||||||||| |||| ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||| |   |    
T  16099074 ttcttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctcc 16099173  T
Q  136 caacttaatcactgccacg 154  Q
    | |||||||||||||||||    
T  16099174 ccacttaatcactgccacg 16099192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 26 - 128
Target Start/End: Complemental strand, 22051412 - 22051310
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||| |||| |||||||||||||  ||| ||||||||||||||  ||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  22051412 atgtatttcattcttgcaattagaggttgtttaaaaattagtctctgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttc 22051313  T
Q  126 gtc 128  Q
    |||    
T  22051312 gtc 22051310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 157
Target Start/End: Original strand, 1695747 - 1695880
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  ||||||||||||||||    
T  1695747 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatt 1695846  T
Q  124 tcgtcctttgaccaacttaatcactgccacgtca 157  Q
    | ||||||||||||| ||||||||||||||||||    
T  1695847 tggtcctttgaccaaattaatcactgccacgtca 1695880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 6573546 - 6573647
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||| | | | ||||||||||| ||||||||||| |||| ||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  6573546 ttaatgatgtgtttcatccctccaattaggcgtcatttaaaaattcgtccatgtaatcgctaatcctggcaatttacccttgaattgtttaatcatttaa 6573645  T
Q  120 aa 121  Q
    ||    
T  6573646 aa 6573647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 2318180 - 2318270
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||||| ||  |||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2318180 cttgcaattagg-gtagtttaaaaattggtctatgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 2318270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 11163430 - 11163316
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| ||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||| |   ||     
T  11163430 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacctctgcattgtttaatcatttaaaatttcgtccctctcccc 11163331  T
Q  138 acttaatcactgcca 152  Q
    |||||||||||||||    
T  11163330 acttaatcactgcca 11163316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 157
Target Start/End: Original strand, 13995680 - 13995813
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||| |||||||||    
T  13995680 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 13995779  T
Q  124 tcgtcctttgaccaacttaatcactgccacgtca 157  Q
    | ||||||||||||| ||||||||||||||||||    
T  13995780 tggtcctttgaccaaattaatcactgccacgtca 13995813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 13692627 - 13692508
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||||||||||||||||    
T  13692627 cttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacca 13692528  T
Q  138 acttaatcactgccacgtca 157  Q
    |||||||||||| |||||||    
T  13692527 acttaatcactgtcacgtca 13692508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 25623379 - 25623470
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    |||||||||||||||||||||| |  |||   |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  25623379 ttaatcatttaaaatttcgtccctctacccggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 25623470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 36382182 - 36382301
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||||  |  |||||||||| |||| | ||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||| |   ||     
T  36382182 cttgcaattagggttcgtttaaaaattggtccctataatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcatccctctcccc 36382281  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  36382282 acttaatcactgccacgtca 36382301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 25624442 - 25624344
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatcc 206  Q
    |||||||||||||||||||||| |  |||   |||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||| ||||||    
T  25624442 ttaatcatttaaaatttcgtccctctacccggttaatcactgccacatcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 25624344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 157
Target Start/End: Original strand, 36479740 - 36479858
Alignment:
Q  39 ttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaa 138  Q
    ||||||||||| ||  |||||||||| |||| |||||||||||||  | ||| |||||||||||||||||||||||||||||||||||||| |   || |    
T  36479740 ttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttagcattttacccttgcattgtttaatcatttaaaatttcgtccatctcccca 36479839  T
Q  139 cttaatcactgccacgtca 157  Q
    |||||||||||||| ||||    
T  36479840 cttaatcactgccatgtca 36479858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 39423553 - 39423655
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |||  ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |   || ||||||||||||||| |    
T  39423553 tttaaaaattggtctctgtaatcgctaattctggcaatttatccttgtattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccatg 39423652  T
Q  155 tca 157  Q
    |||    
T  39423653 tca 39423655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 25892397 - 25892506
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||| |   || |||||||| | ||||||||||| |||| ||||||||||||| ||||||| |||||||| ||||||||||||||||||    
T  25892397 ttaatgatgtgtttcatctatgaaattaggcttcatttaaaaatttgtccatgtaatcgctaatcctggcaaattacccttccattgtttaatcatttaa 25892496  T
Q  120 aatttcgtcc 129  Q
    || |||||||    
T  25892497 aaattcgtcc 25892506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 157
Target Start/End: Original strand, 33062057 - 33062190
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||| |||||||||    
T  33062057 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 33062156  T
Q  124 tcgtcctttgaccaacttaatcactgccacgtca 157  Q
    | |||||| |||||| ||||||||||||||||||    
T  33062157 tggtccttggaccaaattaatcactgccacgtca 33062190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 37895720 - 37895635
Alignment:
Q  72 gtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |   || ||||||||||||||||||||    
T  37895720 gtaatcgctaatcctggcaatttacacttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtca 37895635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 38 - 178
Target Start/End: Original strand, 3555271 - 3555411
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||  |||| ||| || | ||  ||| ||| ||||||||| |||||||||||||||||||||||||| |||     
T  3555271 cttgcaattaggggtcgtttaaaaattggtctctgtattcgttattccttacaaattagccttgcattctttaatcatttaaaatttcgtcctttaaccc 3555370  T
Q  138 acttaatcactgccacgtcatcaaattagcaaaatggcatg 178  Q
    | |||||||||||||  ||||||||||| ||||||||||||    
T  3555371 agttaatcactgccagatcatcaaattaacaaaatggcatg 3555411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 6589778 - 6589674
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| | |||||||| | || ||||||||||| |||| |||||||| |||||||||||| |||||||||||  ||||||||||||||||||||    
T  6589778 atgtgtttcgtccctgcaattaagggtcatttaaaaattggtccatgtaatcgttaattctggcaaattacccttgcaaagtttaatcatttaaaatttc 6589679  T
Q  126 gtcct 130  Q
     ||||    
T  6589678 ctcct 6589674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 6657899 - 6658015
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||| || ||  |||||||||| |||| ||||||| |||||  ||||||||||||| |||||||||||||||||||||||||||||| |   ||     
T  6657899 cttgcaatttggggtcgtttaaaaattggtccctgtaatcactaatcatggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctcccc 6657998  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  6657999 acttaatcactgccacg 6658015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 39498331 - 39498447
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||| ||||||| ||  |||||||||| |||| |||||||| |||| |||||||||||||| | |||||||||||||||||||||||||||| |   ||     
T  39498331 cttgtaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgtttaatcatttaaaatttcgtccctctcccc 39498430  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  39498431 acttaatcactgccacg 39498447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 41248559 - 41248695
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||| |||||||||| |  ||||||||||||||  |||||||||||  ||| |||||| |||||| |||||| |||| || |||| |  |||||| ||    
T  41248559 ggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 41248658  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  41248659 taaaatttggtcctttgaccaaattaatcactgccac 41248695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 10712744 - 10712863
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||||  |  |||||||||| |||||| |||||  |||| ||||||||||||||||||||||||||||||||||||||||| ||| |   ||     
T  10712744 cttgcaattagggttcgtttaaaaattggtccttataatcattaatcctggcaatttacccttgcattgtttaatcatttaaaatttcatccctctcccc 10712843  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||| ||||||||    
T  10712844 acttaatcactaccacgtca 10712863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 16099431 - 16099312
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| || ||||| || ||||  || ||||||| |  ||||||||||||||||| ||||||||||||    
T  16099431 cttgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgacca 16099332  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  16099331 acttaatcactgccacgtca 16099312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 34448202 - 34448083
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||| |||||||||| |||| | || ||| |||| || ||||  ||  |||||| |  ||||||||||||||||||||||||||||||    
T  34448202 cttgcaattaggggttgtttaaaaattggtccctatattcgttaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctttgacca 34448103  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  34448102 acttaatcactgccacgtca 34448083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 36755495 - 36755384
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| | ||||||||||| || ||||  || ||||||| |  ||||||||||||||||||||||||||||||    
T  36755495 cttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacca 36755396  T
Q  138 acttaatcactg 149  Q
    ||||||||||||    
T  36755395 acttaatcactg 36755384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 37895368 - 37895487
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||| | ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  |||||||||||||||||| |||||||||||    
T  37895368 cttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcatcctttgacca 37895467  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  37895468 acttaatcactgccacgtca 37895487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 152
Target Start/End: Original strand, 45556133 - 45556247
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||||  |  |||||||||| |||| ||||||||||||| ||||||||||| || ||||||||||||||||||||||||| |||| |   ||     
T  45556133 cttgcaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttatccctgcattgtttaatcatttaaaattttgtccctctccct 45556232  T
Q  138 acttaatcactgcca 152  Q
    |||||||||||||||    
T  45556233 acttaatcactgcca 45556247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 159
Target Start/End: Original strand, 30729642 - 30729763
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||| |||  |||||||||| |||| | || |||||||| || |||| || |||||||||| ||||||| ||||||||||||||||||||||     
T  30729642 cttgcaattagacgtcgtttaaaaattggtccctatattcgctaatccttgcaaattgcccttgcattctttaatcgtttaaaatttcgtcctttgaccc 30729741  T
Q  138 acttaatcactgccacgtcatc 159  Q
    | ||||||||||| | ||||||    
T  30729742 agttaatcactgctaggtcatc 30729763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 6658254 - 6658135
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||  ||  |||||||||| |||| |||| |||||||| || ||||  || |||| || |  ||||||||||||||||| ||||||||||||    
T  6658254 cttgcaattagaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttacaatcattaatcatttaaaatttagtcctttgacca 6658155  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  6658154 acttaatcactgccacgtca 6658135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 10713130 - 10713011
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||| | ||  |||||||||| ||   |||| |||||||| || |||| ||| ||||||| |  ||||||||||||||| ||||||||||||||    
T  10713130 cttgcaattaagggtcgtttaaaaattggtttctgtattcgctaatccttgcaaattagccttgcaatcgttaatcatttaaaatgtcgtcctttgacca 10713031  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  10713030 acttaatcactgccacgtca 10713011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 14900875 - 14900743
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || |||||||||||| ||  |||||||||| |||| |||||| |||||| ||||||||||| ||||| ||   ||||||||||||    
T  14900875 ttaatgatgtgattagtccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgtat--gttaatcatttaa 14900778  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |   || |||||||||||||||||    
T  14900777 aatttcgtccctctccccacttaatcactgccacg 14900743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 15848495 - 15848376
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| ||   |||| |||||||| || || |  || ||||||| |  ||||||||||||||||||||||||||||||    
T  15848495 cttgcaattaggggtcgtttaaaaattggtttatgtattcgctaatccttgcgaactaaccttgcaatcattaatcatttaaaatttcgtcctttgacca 15848396  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  15848395 acttaatcactgccacgtca 15848376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 199
Target Start/End: Original strand, 25230125 - 25230284
Alignment:
Q  40 tgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaac 139  Q
    |||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |   ||||||||||||||||||||| |   || |     
T  25230125 tgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaattactaatcatttaaaatttcgtccctgagcccag 25230224  T
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    ||||| |||||||| |||||| ||| ||||||||||||| || |||||||||||||||||    
T  25230225 ttaattactgccacatcatcagattggcaaaatggcatgcgaatggacaaaaataccctc 25230284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 36480125 - 36480006
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||| | ||  |||||||||| |||| | || |||||||| || ||||  || ||||||| |  ||||| ||||||||||||||||||||||||    
T  36480125 cttgcaattaagggtcgtttaaaaattggtccctatattcgctaatccttgcaaactagccttgcaatcattaataatttaaaatttcgtcctttgacca 36480026  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  36480025 acttaatcactgccacgtca 36480006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 39498686 - 39498567
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||||  |  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  |||||||||||||||||  |||||||||||    
T  39498686 cttgcaattagggatcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttaatcctttgacca 39498587  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  39498586 acttaatcactgccacgtca 39498567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 11163092 - 11163194
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |||| |||| |||||||| || ||||  ||  |||||| |  ||||||||||||||||| |||||||||||||||||||||||||||||    
T  11163092 tttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttagtcctttgaccaacttaatcactgccacg 11163191  T
Q  155 tca 157  Q
    |||    
T  11163192 tca 11163194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 158
Target Start/End: Complemental strand, 25231253 - 25231135
Alignment:
Q  40 tgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaac 139  Q
    |||||||||| ||  |||||||||| |||| |||| |||||||| || |||| |||||||||||   ||||||||||||||||||||||| ||| || |     
T  25231253 tgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaattacccttgcaaactttaatcatttaaaatttcgtcccttgtcccag 25231154  T
Q  140 ttaatcactgccacgtcat 158  Q
    ||||| |||||||||||||    
T  25231153 ttaatgactgccacgtcat 25231135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 33739710 - 33739840
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  ||||||||||||||||    
T  33739710 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatt 33739809  T
Q  124 tcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||| |   || |||||||||||||||||    
T  33739810 tcgtccctctccccacttaatcactgccacg 33739840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 44713833 - 44713931
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    |||||||||| |||  |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  44713833 tttaaaaattggtcaatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 44713931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 29958524 - 29958467
Alignment:
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  29958524 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 29958467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 153
Target Start/End: Complemental strand, 33740093 - 33739964
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||| ||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||| |||||||||    
T  33740093 tgatgtgtttagcccttacaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 33739994  T
Q  124 tcgtcctttgaccaacttaatcactgccac 153  Q
    | |||||| |||||| ||||||||||||||    
T  33739993 tggtccttggaccaaattaatcactgccac 33739964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 20983237 - 20983181
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  20983237 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 20983181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 21103205 - 21103261
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  21103205 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 21103261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 3653470 - 3653368
Alignment:
Q  54 atttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    ||||||||||| |||| |||||||| |||| ||||||| |||||||||||  |||||||||||||||||||||||| |   |||| ||||||||| ||||    
T  3653470 atttaaaaattggtccatgtaatcgttaat-ctggcaaattacccttgcaaagtttaatcatttaaaatttcgtccctcttccaagttaatcactaccac 3653372  T
Q  154 gtca 157  Q
    ||||    
T  3653371 gtca 3653368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 39423922 - 39423803
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  ||||||||||  ||| | || |||||||| || ||||  ||  |||||| |  ||||||||||||||||| ||||||||||||    
T  39423922 cttgcaattaggggtcgtttaaaaattgatccctatattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaattttgtcctttgacca 39423823  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  39423822 acttaatcactgccacgtca 39423803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 13996063 - 13995933
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||| |||||||||    
T  13996063 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 13995964  T
Q  124 tcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||| |   || |||||||||||||||||    
T  13995963 tcgtccctctccccacttaatcactgccacg 13995933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 22051088 - 22051134
Alignment:
Q  111 atcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  22051088 atcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 22051134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 33062440 - 33062310
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  ||||||||||| ||||    
T  33062440 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttataatt 33062341  T
Q  124 tcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||| |   || |||||||||||||||||    
T  33062340 tcgtccctctccccacttaatcactgccacg 33062310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 157
Target Start/End: Complemental strand, 6577674 - 6577565
Alignment:
Q  48 ggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcac 147  Q
    ||||| ||||||||||| |||| ||||||||| ||| ||||||| ||||  |||||||||||||| |||||||| | ||||| |   || ||||||||||    
T  6577674 ggcgtcatttaaaaatttgtccctgtaatcgccaatcctggcaaattactattgcattgtttaattatttaaaaatccgtccctcttcccacttaatcac 6577575  T
Q  148 tgccacgtca 157  Q
    ||||||||||    
T  6577574 tgccacgtca 6577565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 29957940 - 29957997
Alignment:
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||    
T  29957940 ttaatcattgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 29957997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 197
Target Start/End: Original strand, 199088 - 199188
Alignment:
Q  97 ccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaatacc 196  Q
    |||||||  ||||||||||||||||||| |||| || ||| ||||||| |||| ||| ||||||||||| |||||  ||||| || ||||||||||||||    
T  199088 ccttgcaaagtttaatcatttaaaattttgtcccttaacccacttaatgactgtcacatcatcaaattaacaaaagagcatgcgaatggacaaaaatacc 199187  T
Q  197 c 197  Q
    |    
T  199188 c 199188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 20982648 - 20982704
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||||||||||||||||||||||||||||| |||||| | |||||||||||||    
T  20982648 taatcactgccacgtcatcaaattagcaaaatggtatgggaattgacaaaaataccc 20982704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 41248935 - 41248819
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||| ||||||||||||||| |   ||     
T  41248935 cttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttcgtccctctcccc 41248836  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  41248835 acttaatcactgccacg 41248819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 34447834 - 34447948
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||| ||||||| || ||||||||||| |||| | ||||||| ||| ||| |||||||||||||||||||||||| |||| ||||||||||  |   ||     
T  34447834 cttgtaattaggggtcatttaaaaattggtccctataatcgcaaatcctgacaatttacccttgcattgtttaataattt-aaatttcgtctctctcccc 34447932  T
Q  138 acttaatcactgccac 153  Q
    ||||||||||||||||    
T  34447933 acttaatcactgccac 34447948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 36382534 - 36382419
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||| | ||  |||||||||| |||| |||| |||||||| |  ||||  ||  |||||| |  |||||||||||||||||||||||||| |||    
T  36382534 cttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccatgcaaactagtcttgcaatcgttaatcatttaaaatttcgtcctttggcca 36382435  T
Q  138 acttaatcactgccac 153  Q
    ||||||||||||||||    
T  36382434 acttaatcactgccac 36382419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 28228679 - 28228805
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| | |||||||||| || ||||||||||| |||| |||||||| ||||  |||||| |||| ||| ||  |||||||||||| ||||||     
T  28228679 atgtgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcgtggcaaattactctttcaaagtttaatcatttgaaattta 28228778  T
Q  126 gtcctttgaccaacttaatcactgcca 152  Q
    || | || ||| ||||||| |||||||    
T  28228779 gttccttaacccacttaatgactgcca 28228805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 36755131 - 36755233
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| || | ||||| ||||||| ||  |||||||||||| |||||||||||||||||||||||||||  |   || |||||||||||| ||||    
T  36755131 tttaaaaattggttcatgtaaccgctaatcctaacaatttacccttacattgtttaatcatttaaaatttcgtctctctccccacttaatcactgtcacg 36755230  T
Q  155 tca 157  Q
    |||    
T  36755231 tca 36755233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 8710605 - 8710650
Alignment:
Q  154 gtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  8710605 gtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 8710650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 28230158 - 28230057
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| | || ||||| | || ||||||||||| |||| |||||||| |||| || |||| |||||||| ||  ||||||||||||||||||||    
T  28230158 atgtgtttcgtccctgtaattatgggtcatttaaaaattggtccctgtaatcgttaatcctagcaaattaccctttcaaagtttaatcatttaaaatttc 28230059  T
Q  126 gt 127  Q
    ||    
T  28230058 gt 28230057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 138
Target Start/End: Original strand, 39935465 - 39935576
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| || ||||||||| ||  |||||||||| || ||| |||||| |||| ||| ||| ||| |||||||  ||||||||||||||||||||    
T  39935465 atgtgtttcgtcct-gcaattaggtgtggtttaaaaattggttcttataatcgttaatcctgacaaattatccttgcaaagtttaatcatttaaaatttc 39935563  T
Q  126 gtcctttgaccaa 138  Q
     || |||||||||    
T  39935564 atcttttgaccaa 39935576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 1696130 - 1696000
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| || | |||||| |||||| |||||| |||| || |||| |  |||||| |||||||||    
T  1696130 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgttcctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 1696031  T
Q  124 tcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||| |   || |||||||||||| ||||    
T  1696030 tcgtccctctccccacttaatcactgtcacg 1696000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 127
Target Start/End: Complemental strand, 25893590 - 25893536
Alignment:
Q  73 taatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgt 127  Q
    |||||||||||  || ||||||||||||||||||||||||||||||||| |||||    
T  25893590 taatcgctaatcttgacaatttacccttgcattgtttaatcatttaaaaattcgt 25893536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 45556454 - 45556340
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||| ||||||| ||  |||||||||| |||  |||| ||||||||  | ||||  || ||||||| |  |||||||||||||||||  |||||||||||    
T  45556454 cttgtaattaggggtcgtttaaaaattggtcgctgtattcgctaatctttgcaaactagccttgcaatcattaatcatttaaaatttaatcctttgacca 45556355  T
Q  138 acttaatcactgcca 152  Q
    |||||||||||||||    
T  45556354 acttaatcactgcca 45556340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 9076404 - 9076359
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  9076404 ttaatcatttaaaatttcgtcatttaaccaacttaatcactgccac 9076359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 158
Target Start/End: Complemental strand, 3556416 - 3556296
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||| | ||  |||||||||| |||  |||||||| |||| || ||||  || ||||||||| ||||||||||||||||||| |||||| ||      
T  3556416 cttgcaattatgggtcgtttaaaaattggtctctgtaatcgttaatccttgcaaactagccttgcattctttaatcatttaaaatttcctcctttaactc 3556317  T
Q  138 acttaatcactgccacgtcat 158  Q
    |  |||||| |||||||||||    
T  3556316 agctaatcaatgccacgtcat 3556296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 14900499 - 14900572
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatt 93  Q
    ||||||||||| || || ||||||||||||||| ||| ||||||| |||| |||||| |||||| || ||||||    
T  14900499 ttaatgatgtgattagtccttgcaattaggcgtcattcaaaaattcgtccctgtaattgctaatccttgcaatt 14900572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 14900574 - 14900623
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||||||| |||||| ||| |||||||||||| ||||||||    
T  14900574 ttaatcatttaaaatttggtccttggacaaacttaatcactaccacgtca 14900623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 157
Target Start/End: Complemental strand, 44045407 - 44045290
Alignment:
Q  40 tgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaac 139  Q
    |||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||| |||| |   || |     
T  44045407 tgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaattttgtccctcatcccag 44045308  T
Q  140 ttaatcactgccacgtca 157  Q
    ||||||||||||||||||    
T  44045307 ttaatcactgccacgtca 44045290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 2318492 - 2318445
Alignment:
Q  111 atcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcat 158  Q
    |||| |||||||||| || |||||||||||||||||||||||| ||||    
T  2318492 atcacttaaaatttcatcttttgaccaacttaatcactgccacatcat 2318445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 43742067 - 43742000
Alignment:
Q  54 atttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaa 121  Q
    ||||||||||| |||| |||||||  |||| ||| ||| |||||||||||  ||||||||||||||||    
T  43742067 atttaaaaattggtccatgtaatcattaatcctgacaaattacccttgcaaagtttaatcatttaaaa 43742000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 158
Target Start/End: Complemental strand, 6307126 - 6307003
Alignment:
Q  37 tcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt--tcgtcctttga 134  Q
    ||||||||||||  ||  |||||||||| |||| | |||||| |||| ||  ||| |||  | |||||| |||||||||||||||||  |||||||||||    
T  6307126 tcttgcaattagtggtcgtttaaaaattggtccctataatcgttaatccttacaaattagtcctgcattatttaatcatttaaaatttctcgtcctttga 6307027  T
Q  135 ccaacttaatcactgccacgtcat 158  Q
    |  | ||||  |||||||||||||    
T  6307026 cttagttaaggactgccacgtcat 6307003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 179; Significance: 1e-96; HSPs: 112)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 15230354 - 15230124
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    |||||||||||||| || |||||||||||| || |||||||||||||||| |||||||||||||  || |||||||||||||||||||||||||||||||    
T  15230354 ttaatgatgtgttttgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcttgacaatttacccttgcattgtttaatcatttaa 15230255  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  15230254 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatccattcgtgaaatga 15230155  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    ||||||||||| || |||||||||| |||||    
T  15230154 catttttacccctgtcttcatcttcttctca 15230124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 25124986 - 25124756
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||| ||||||||||| |||||||||||| || |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25124986 ttaatcatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 25124887  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||    
T  25124886 aatttcatcctttgaacaacttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcgtcatccattcgtgaaatga 25124787  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    ||||||||||| || |||||||||| |||||    
T  25124786 catttttacccctgtcttcatcttcttctca 25124756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 20 - 250
Target Start/End: Original strand, 44664511 - 44664741
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||| ||||||||||| ||||||||||||||| |||||||||||||||| |||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  44664511 ttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttaaccttgcattgtttaatcatttaa 44664610  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| ||||||    
T  44664611 aatttcgtcatttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcacgggaatggacaaaaatatcctcgtcatccattcgtgaaatga 44664710  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    ||||||||||| || |||||||||| |||||    
T  44664711 catttttacccctgtcttcatcttcttctca 44664741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 6471685 - 6471923
Alignment:
Q  12 tttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaa 111  Q
    |||| |||||||||||||||||||| ||||||||||||||| |||||||||| ||||  | ||||||||||| |||||||||||||||||||||||||||    
T  6471685 ttttaggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatgagtctctataatcgctaatcctggcaatttacccttgcattgtttaa 6471784  T
Q  112 tcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcg 211  Q
    ||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||| ||||||||||||||||    
T  6471785 tcatttaaaatttcgtctttttatcaacttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggataaaaatatcctcgtcatccattcg 6471884  T
Q  212 taaaatgacatttttacccatgacttcatcttcatctca 250  Q
    ||||||||||||||||||| || |||||||||| |||||    
T  6471885 taaaatgacatttttacccctgtcttcatcttcttctca 6471923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 17 - 230
Target Start/End: Complemental strand, 42945540 - 42945327
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||| ||| |||||||| |||||||||||||||||||    
T  42945540 ggtttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctgacaatttactcttgcattgtttaatcatt 42945441  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaa 216  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |  ||    
T  42945440 taaaatttcgtcatttgaccaacttaatcactgccaagtcatcaaattagtaaaatggcatgggaatggacaaaaataccctcgtcatccattcttgtaa 42945341  T
Q  217 tgacatttttaccc 230  Q
    ||||||||||||||    
T  42945340 tgacatttttaccc 42945327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 17 - 201
Target Start/End: Complemental strand, 10445761 - 10445577
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||||||||||||||| |||||||||||| || |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  10445761 ggtttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 10445662  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgt 201  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  10445661 taaaatttcgtcttttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatggaaatggacaaaaataccctcgt 10445577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 20 - 244
Target Start/End: Complemental strand, 41353996 - 41353773
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| |||  |||||||||| |||||||||||||||| ||||||| ||||| ||| ||||||||||| ||||| |||||||||||||    
T  41353996 ttaatgatgtgtttcgtccttataattaggcgtcatttaaaaattagtccctgtaatcactaatcctgacaatttaccctagcattatttaatcatttaa 41353897  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||| || |||||||||||| ||||||||||||||||| ||||||    
T  41353896 aatttcgtcctttgaccaacttaatcaccgtcacgtcatcaaattagcaaaatgacatgagaatggacaaaaata-cctcgtcatccattcgtgaaatga 41353798  T
Q  220 catttttacccatgacttcatcttc 244  Q
    ||||||||||| || ||||||||||    
T  41353797 catttttacccctgtcttcatcttc 41353773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 20 - 199
Target Start/End: Complemental strand, 35634522 - 35634343
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| |||||||||| |||| |||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  35634522 ttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 35634423  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35634422 aatttcgtcctttaaccaacttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 35634343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 25124563 - 25124748
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  25124563 ggtttaatgatgtatttcgttcttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 25124662  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||  |||||| | ||||||||||| ||||||    
T  25124663 taaaatttcgtcctttgaccaacttaaccactgccaagtcatcaaattagcaaaatgatatgggaattgacaaaaatactctcgtc 25124748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 15229925 - 15230113
Alignment:
Q  11 ttttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgttta 110  Q
    |||||||| |||||||||||||| || ||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||    
T  15229925 ttttttggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttggattgttta 15230024  T
Q  111 atcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    |||||||||||||||||||||||| ||||||||||||| ||| || ||||||||||||||||||||||||| |||||||||||||||||    
T  15230025 atcatttaaaatttcgtcctttgatcaacttaatcactaccaagttatcaaattagcaaaatggcatgggaatggacaaaaataccctc 15230113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 37542224 - 37542409
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    ||||||||||||||||||||  |||||||||||||| |||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||    
T  37542224 ggtttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcctggcaatttacccttgcattgtttaatcatt 37542323  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||||| || |||||||||||||||||    
T  37542324 taaaatttcgttctttgaccaacttaatcaccgccaagtcatcaaattaacaaaatggcatgggaatgaacaaaaataccctcgtc 37542409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 44664940 - 44664749
Alignment:
Q  11 ttttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgttta 110  Q
    |||||||  ||||||||||||||||| ||||||||||||||| |||||||||||||||  ||||||||||||| ||| ||||||||||||||||||||||    
T  44664940 ttttttgtcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttacccttgcattgttta 44664841  T
Q  111 atcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||||||||||||||  ||||||||||||||||| ||||| ||||||| |||||||||||||||||||| |||||||||||| |||||||    
T  44664840 atcatttaaaatttcgttatttgaccaacttaatcattgccaagtcatcagattagcaaaatggcatgggaatggacaaaaatatcctcgtc 44664749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 60 - 250
Target Start/End: Complemental strand, 21433076 - 21432886
Alignment:
Q  60 aaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatc 159  Q
    |||||||||| |||||||| ||||| || |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||| |||    
T  21433076 aaattagtccatgtaatcgttaattttgacaatttacccttgcattgtttaatcatttacaatgtcgtcctttgaccaacttaatcactgacacgttatc 21432977  T
Q  160 aaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatgacatttttacccatgacttcatcttcatctca 250  Q
    |||||||||||||| ||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| || |||||||||| |||||    
T  21432976 aaattagcaaaatgacatgggaatggataaaaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttcttctca 21432886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 20 - 189
Target Start/End: Complemental strand, 8998112 - 8997943
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||| | |||||||||||||  || |||||||||||||||||||||||||||||||    
T  8998112 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcatgtaatcgctaatcatgacaatttacccttgcattgtttaatcatttaa 8998013  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaa 189  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  8998012 aattccgtcctttgaccaacttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaa 8997943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 37542650 - 37542417
Alignment:
Q  18 gtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcattt 117  Q
    ||||||| ||||||||| | ||| ||||||||||| ||||||||||| || | ||| |||| ||||||||  ||||||||||||||||||||||||||||    
T  37542650 gtttaataatgtgtttcatccttacaattaggcgtcatttaaaaattggttcctgttatcgttaattctgataatttacccttgcattgtttaatcattt 37542551  T
Q  118 aaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaat 217  Q
    ||||||||||||||||||||||||||||||| | |||||||  ||||||||||||| |||  || |||||||||||||||||||||||||||||| ||||    
T  37542550 aaaatttcgtcctttgaccaacttaatcactccaacgtcattgaattagcaaaatgacattagaatggacaaaaataccctcgtcatccattcgtgaaat 37542451  T
Q  218 gacat-ttttacccatgacttcatcttcatctca 250  Q
    ||||| |||||||| ||  ||||||||| |||||    
T  37542450 gacattttttacccctgtgttcatcttcttctca 37542417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 21432696 - 21432878
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||| ||| || ||||||||||||  ||||||| |||||| || |||||||||||||||||||||||||||||||    
T  21432696 ttaatgatgtgtttcgtccttgcaattagacgtcatataaaaattagtctctgtaatcactaattttgacaatttacccttgcattgtttaatcatttaa 21432795  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||| |||||| |||||||||||| ||| |||||||||||||||||||||||||| | |||||||||||||| |||||    
T  21432796 aatttcgtcttttgactaacttaatcactcccaagtcatcaaattagcaaaatggcatggaaatggacaaaaataccatcgtc 21432878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 20 - 195
Target Start/End: Original strand, 7983431 - 7983606
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||| ||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7983431 ttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 7983530  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaatac 195  Q
    |||||||||||||||  |||||||||||| | | ||||||||||||| |||||| ||||  | |||||||||||||    
T  7983531 aatttcgtcctttgaaaaacttaatcactacaaagtcatcaaattagaaaaatgacatgaaaatggacaaaaatac 7983606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 54 - 204
Target Start/End: Original strand, 39474583 - 39474732
Alignment:
Q  54 atttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    |||||||||||| | |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39474583 atttaaaaattaattcttgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtc-tttgaccaacttaatcactgccac 39474681  T
Q  154 gtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcat 204  Q
     ||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  39474682 atcatcaaattagcaaaatggcatggaaatggacaaaaataccctcgtcat 39474732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 61 - 202
Target Start/End: Original strand, 42945158 - 42945299
Alignment:
Q  61 aattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatca 160  Q
    ||||||||| |||||| |||||| ||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42945158 aattagtccctgtaattgctaatcctgacaatttacccttatattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccaagtcatca 42945257  T
Q  161 aattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  42945258 aattagtaaaatggcatgggaatggacaaaaataccctcgtc 42945299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 41353575 - 41353759
Alignment:
Q  18 gtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcattt 117  Q
    |||||||||| |||||||| ||| ||||||||||| ||||||||||||||   ||||||||||||| ||  |||||||||||||||||||||||||||||    
T  41353575 gtttaatgatatgtttcgtccttacaattaggcgtcatttaaaaattagtttctgtaatcgctaatcctaacaatttacccttgcattgtttaatcattt 41353674  T
Q  118 aaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||||| ||||| ||||||||||||| ||| || ||||||||| ||||||| |||| || |||||||| |||||||||||    
T  41353675 aaaatttcgtcatttgagcaacttaatcactaccaagttatcaaattaacaaaatgacatgagaatggacaaatataccctcgtc 41353759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 234163 - 234016
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||| |||||| | |||| |||||||||||||||||||||||||||||||||||    
T  234163 ttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaa 234064  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagc 167  Q
    ||||||||||||||| ||||||||||||| |||  | |||||||||||    
T  234063 aatttcgtcctttgatcaacttaatcactaccaaattatcaaattagc 234016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 710574 - 710427
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||| |||||| | |||| |||||||||||||||||||||||||||||||||||    
T  710574 ttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaa 710475  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagc 167  Q
    ||||||||||||||| ||||||||||||| |||  | |||||||||||    
T  710474 aatttcgtcctttgatcaacttaatcactaccaaattatcaaattagc 710427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 747786 - 747639
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||| |||||| | |||| |||||||||||||||||||||||||||||||||||    
T  747786 ttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaa 747687  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagc 167  Q
    ||||||||||||||| ||||||||||||| |||  | |||||||||||    
T  747686 aatttcgtcctttgatcaacttaatcactaccaaattatcaaattagc 747639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 871681 - 871534
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||| |||||| | |||| |||||||||||||||||||||||||||||||||||    
T  871681 ttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaa 871582  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagc 167  Q
    ||||||||||||||| ||||||||||||| |||  | |||||||||||    
T  871581 aatttcgtcctttgatcaacttaatcactaccaaattatcaaattagc 871534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 26 - 206
Target Start/End: Complemental strand, 2535969 - 2535789
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||| |||||| | |||||||||| || ||||||||||| |||| |||||||| |||| ||||||| |||||||| ||  ||||||||||||||||||||    
T  2535969 atgtatttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattacccttacaaagtttaatcatttaaaatttc 2535870  T
Q  126 gtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatcc 206  Q
    |||| |||||| ||||||| |||||||| |||||||||||| |||||||||||||| ||||||||||||| ||| ||||||    
T  2535869 gtcccttgacccacttaatgactgccacatcatcaaattagtaaaatggcatgggaatggacaaaaatacactcatcatcc 2535789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 55 - 202
Target Start/End: Complemental strand, 6472078 - 6471931
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    ||||||||||||| | ||||||||| ||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |    
T  6472078 tttaaaaattagttcatgtaatcgccaatcctgacaatttacccttgcattgtttaatcatttaaaattttgtcctttgaccaacttaatcactaccaag 6471979  T
Q  155 tcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    | ||||||||| |||||| |||||||| | ||||||||||||||||||    
T  6471978 ttatcaaattaacaaaatagcatgggaattgacaaaaataccctcgtc 6471931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 27500092 - 27500273
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    |||||||| |||||||| ||||||||||  ||| |||||||||||||||| || |||||||||||||| ||| |||| | |||||||||||||||| |||    
T  27500092 ttaatgatatgtttcgtccttgcaattaaacgtcatttaaaaattagtccatgcaatcgctaattctgacaaattactcatgcattgtttaatcatataa 27500191  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||| | |||||| |||||||||||||  || |||||||||||||||||||| |||| || ||||||||||||||||||||    
T  27500192 aatttcat-ctttgagcaacttaatcactatcaagtcatcaaattagcaaaatgacatgagaatggacaaaaataccctcgtc 27500273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 250
Target Start/End: Complemental strand, 27500423 - 27500281
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatcca 207  Q
    |||||||||||||||||| || |||||||||||||||||||| |||||||||||||||| ||||| |||||||| ||| |||||||||||||||||||||    
T  27500423 ttaatcatttaaaatttcatcatttgaccaacttaatcactgtcacgtcatcaaattagaaaaattgcatgggaatgggcaaaaataccctcgtcatcca 27500324  T
Q  208 ttcgtaaaatgacatttttacccatgacttcatcttcatctca 250  Q
    ||||| || ||| |||||||||| || |||||||||| |||||    
T  27500323 ttcgtgaattgatatttttacccctgtcttcatcttcttctca 27500281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 49 - 202
Target Start/End: Original strand, 38003487 - 38003640
Alignment:
Q  49 gcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcact 148  Q
    |||| ||||||||||||||   |||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  38003487 gcgtcatttaaaaattagtttctgtaatcgctaattatgacaatttaaccttgtattgtttaatcatttaaaatttcgttctttgaccaacttaatcact 38003586  T
Q  149 gccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
     | | ||||||||||||||||||||| || | | ||||||||||||||||||||    
T  38003587 actaagtcatcaaattagcaaaatggtatagaaatggacaaaaataccctcgtc 38003640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 55 - 199
Target Start/End: Complemental strand, 34177360 - 34177216
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| ||||||||| |||||||| || | ||  || ||||||||| ||||||||||||||||||||||| |||||| ||||||| ||||||||     
T  34177360 tttaaaaattggtccttgtattcgctaatccttgtaaactagccttgcattctttaatcatttaaaatttcgtcccttgacccacttaatgactgccaca 34177261  T
Q  155 tcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  34177260 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 34177216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 11675088 - 11674951
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || ||||||||||||||| ||||||||||| |||| |||||| |||||| ||||||||||| ||||||| |  ||||||||||||    
T  11675088 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 11674989  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  11674988 aatttggtccttggaccaacttaatcactgccacgtca 11674951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 40318371 - 40318252
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   |      
T  40318371 cttgcaattaggggttgtttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccttctcctc 40318272  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||| ||||    
T  40318271 acttaatcactgccatgtca 40318252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 8316995 - 8316879
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |   ||     
T  8316995 cttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccatctcccc 8316896  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  8316895 acttaatcactgccacg 8316879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 36325631 - 36325491
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||||||||| || || ||||||||||||||| ||||||||||| |||  |||||| | |||| ||||||||||| ||||||| |  |||||||||    
T  36325631 ggtttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtctctgtaattgttaatcctggcaatttagccttgcaattgttaatcatt 36325532  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  36325531 taaaatttggtccttggaccaacttaatcactgccacgtca 36325491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 16388933 - 16388814
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| || ||||||||||| || | |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |   ||     
T  16388933 cttgcaattaggggtcatttaaaaattggttcatgtaattgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccc 16388834  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  16388833 acttaatcactgccacgtca 16388814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 8997854 - 8997946
Alignment:
Q  15 ttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgt 107  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||| || |||||||||| ||| |||||||||||||||||||    
T  8997854 ttggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgcaatcgctaatcctgacaatttacccttgcattgt 8997946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 20 - 148
Target Start/End: Original strand, 23505055 - 23505183
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || ||||||||||||||| ||||||||||| |||| |||||| ||||||  |||||||||||||||||| |  ||||||||||||    
T  23505055 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccatgtaattgctaatcttggcaatttacccttgcaattgttaatcatttaa 23505154  T
Q  120 aatttcgtcctttgaccaacttaatcact 148  Q
    ||||| |||||| |||||| |||||||||    
T  23505155 aatttggtccttggaccaaattaatcact 23505183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 23663921 - 23663805
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |   ||     
T  23663921 cttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccc 23663822  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  23663821 acttaatcactgccacg 23663805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 39071697 - 39071816
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |   ||     
T  39071697 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccc 39071796  T
Q  138 acttaatcactgccacgtca 157  Q
    |||||||||||||| |||||    
T  39071797 acttaatcactgccgcgtca 39071816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 55 - 197
Target Start/End: Original strand, 2534733 - 2534875
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| || | ||||||||||||| || ||||  ||| |||||||||||||||||||||||||||||||| |   || | ||||||||||||||     
T  2534733 tttaaaaattggtacatgtaatcgctaatccttgcaaactactcttgcattgtttaatcatttaaaatttcgtccctattcccagttaatcactgccaca 2534832  T
Q  155 tcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||||||||||||||| |||| | | |||||||||||||    
T  2534833 tcatcaaattagcaaaatggtatggaaattgacaaaaataccc 2534875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 38 - 159
Target Start/End: Complemental strand, 34061735 - 34061614
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||| |||  ||||||||||  ||| |||| |||||||| || |||| || |||||||||| |||||||||||||||||||||||||||||||    
T  34061735 cttgcaattagacgtcgtttaaaaattgatccatgtattcgctaatccttgcaaattgcccttgcattctttaatcatttaaaatttcgtcctttgacca 34061636  T
Q  138 acttaatcactgccacgtcatc 159  Q
    | ||||||||||||| ||||||    
T  34061635 agttaatcactgccatgtcatc 34061614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 23507850 - 23507722
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || ||||||||||||||| ||||||||||  |||| |||||| |||||| || |||||||||||||||| |  ||||||||||||    
T  23507850 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaatacgtccctgtaattgctaatccttgcaatttacccttgcaattgttaatcatttaa 23507751  T
Q  120 aatttcgtcctttgaccaacttaatcact 148  Q
    ||||| |||||| |||||| |||||||||    
T  23507750 aatttggtccttggaccaaattaatcact 23507722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 23698651 - 23698535
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||| ||||||| ||  |||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |   ||     
T  23698651 cttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccc 23698552  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||| ||||    
T  23698551 acttaatcactgtcacg 23698535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 98 - 197
Target Start/End: Original strand, 34176522 - 34176621
Alignment:
Q  98 cttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||| ||||||||||||||||||| |||||||||| | |||||||||| || |||||||||||||||||||||| |||||  ||||||||||||||    
T  34176522 cttgcattctttaatcatttaaaatttcatcctttgacccagttaatcactgtcaggtcatcaaattagcaaaatggcttgggaaaggacaaaaataccc 34176621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 36928514 - 36928616
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |||  ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |   || |||||||||||||||||    
T  36928514 tttaaaaattggtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 36928613  T
Q  155 tca 157  Q
    |||    
T  36928614 tca 36928616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 97 - 206
Target Start/End: Original strand, 7294181 - 7294290
Alignment:
Q  97 ccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaatacc 196  Q
    ||||||||| ||||||||||||||||||| |||||||||| | |||||||||| ||  |||||||||||||||||||||||  || |||||||||||| |    
T  7294181 ccttgcattctttaatcatttaaaatttcatcctttgacccagttaatcactgtcagatcatcaaattagcaaaatggcataagaatggacaaaaataac 7294280  T
Q  197 ctcgtcatcc 206  Q
    ||| ||||||    
T  7294281 ctcatcatcc 7294290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 38003832 - 38003747
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgc 102  Q
    |||||||||||||||||||| ||||||||||| ||| |||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  38003832 ggtttaatgatgtgtttcgtccttgcaattagtcgtaatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgc 38003747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 44406857 - 44406997
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||| |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||| ||    
T  44406857 ggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 44406956  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||| |||||| |||||| ||||||||||||||||||    
T  44406957 taaaatttggtccttggaccaaattaatcactgccacgtca 44406997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 4995063 - 4994973
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||||| || ||||||||||| ||||| |||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||    
T  4995063 cttgcaattaggggtcatttaaaaattggtcct-gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttcaaatttcgtcc 4994973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 13186081 - 13186200
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||||  |  |||||||||| || | ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||  |   ||     
T  13186081 cttgcaattagggatcgtttaaaaattggttcatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtctctctcccc 13186180  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  13186181 acttaatcactgccacgtca 13186200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 22915748 - 22915649
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |||| |||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||| |   || |||||||||||||||||    
T  22915748 tttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaattccgtccctctccccacttaatcactgccacg 22915649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 31608920 - 31608801
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||| | ||  |||||||||| |||| |||| |||||||| || |||||||||||||||||||| ||||||||||||||||||||| |   ||     
T  31608920 cttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttgcaatttacccttgcattgtctaatcatttaaaatttcgtccctctcccc 31608821  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  31608820 acttaatcactgccacgtca 31608801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 23698347 - 23698445
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    ||||||||||||||| |||||||||||||||| ||||  || ||||||| |  ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  23698347 tttaaaaattagtccctgtaatcgctaattcttgcaaactagccttgcaatcattaatcagttaaaatttcgtcctttgaccaatttaatcactgccac 23698445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 151
Target Start/End: Complemental strand, 12273260 - 12273147
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||||||| |||| | | ||||||||||||||||||||||||||||||||||||||||| |   ||     
T  12273260 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcccgtcaatttacccttgcattgtttaatcatttaaaatttcgtccctcttccc 12273161  T
Q  138 acttaatcactgcc 151  Q
    ||||||||||||||    
T  12273160 acttaatcactgcc 12273147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 3041456 - 3041596
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||| |||||||||| |  |||||||||| |||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||| ||    
T  3041456 ggtttattgatgtgtttagcccttgcaattaagcggcatttaaaaattcgtccatgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 3041555  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||| |||||| |||||| ||||||||||||||||||    
T  3041556 taaaatttggtccttggaccaaattaatcactgccacgtca 3041596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 38845299 - 38845439
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||| ||||||||||    ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||| ||    
T  38845299 ggtttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 38845398  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||| |||||| |||||| ||||||||||||||||||    
T  38845399 taaaatttggtccttggaccaaattaatcactgccacgtca 38845439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 38862991 - 38862855
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||  |||| |||| | |||||||||||| ||  |||||||||| |||  |||| |||||||| || ||||  || ||||||| |  |||||||||    
T  38862991 ggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 38862892  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    |||||||||||||||||||||||||||||||||||||    
T  38862891 taaaatttcgtcctttgaccaacttaatcactgccac 38862855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 1425411 - 1425313
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| ||||| |||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||| |   || |||||||||||||||||    
T  1425411 tttaaaaattggtcct-gtaatcactaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 1425313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 244
Target Start/End: Complemental strand, 7983702 - 7983627
Alignment:
Q  169 aaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatgacatttttacccatgacttcatcttc 244  Q
    ||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||    
T  7983702 aaatggcatgggaatgaacaaaaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 7983627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 8316674 - 8316789
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| ||| |||| || ||||  || ||||||| |  ||||||||||||||||||||||||||||||    
T  8316674 cttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacca 8316773  T
Q  138 acttaatcactgccac 153  Q
    ||||||||||||||||    
T  8316774 acttaatcactgccac 8316789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 11674698 - 11674831
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || |||||||||||||||  |||||||||| |||| |||||| | |||| ||||||||||| ||||||| |  ||||||||||||    
T  11674698 ttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaa 11674797  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacg 154  Q
    ||||||||||  |  || |||||||||||||||||    
T  11674798 aatttcgtcc-ctctcccacttaatcactgccacg 11674831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 148 - 250
Target Start/End: Complemental strand, 38003749 - 38003648
Alignment:
Q  148 tgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatgacatttttacccatgacttcatcttcatc 247  Q
    |||||| | |||||||||||||||||||||| || | |||||||||||| ||| ||||||||||| ||||||||||||||||| || |||||||||| ||    
T  38003749 tgccacattatcaaattagcaaaatggcatgagaatagacaaaaataccatcgccatccattcgtgaaatgacatttttaccc-tgtcttcatcttcttc 38003651  T
Q  248 tca 250  Q
    |||    
T  38003650 tca 38003648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 1425074 - 1425193
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| || ||||| || ||||  || ||||||| |  ||||||||||||||||| ||||||||||||    
T  1425074 cttgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgacca 1425173  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||| ||||||||||    
T  1425174 acttaatcattgccacgtca 1425193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 3041859 - 3041716
Alignment:
Q  11 ttttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgttta 110  Q
    ||||| || ||| |||||||||| | |||||||||||||||  ||||||||| | |||| |||||| |||||| |||||| |||| || |||| |  |||    
T  3041859 tttttaggcttattgatgtgtttagctcttgcaattaggcggcatttaaaaactcgtccctgtaattgctaatcctggcattttaaccctgcaattgtta 3041760  T
Q  111 atcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    ||||||||||||||||||| |   || |||||||||||||||||    
T  3041759 atcatttaaaatttcgtccctctccccacttaatcactgccacg 3041716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 4406067 - 4405948
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||| ||||||| ||| |||||||||| |||| |||| | | |||| || |||||||||||||||| ||||||||||||||||||||||||| |   ||     
T  4406067 cttgtaattaggggttgtttaaaaattggtccatgtatttgttaatccttgcaatttacccttgcaatgtttaatcatttaaaatttcgtccctcttccc 4405968  T
Q  138 acttaatcactgccacgtca 157  Q
    |||||||||||| |||||||    
T  4405967 acttaatcactgtcacgtca 4405948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 12198971 - 12199090
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| | ||||||||||| || ||||  ||  |||||| |  ||||||||||||||||||||||||||||||    
T  12198971 cttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctttgacca 12199070  T
Q  138 acttaatcactgccacgtca 157  Q
    | |||||||||| |||||||    
T  12199071 atttaatcactgtcacgtca 12199090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 12272939 - 12273054
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||||  |  |||||||||| |||  ||||||||||||| || ||||  || ||||||| |  ||||||||||||||||||||||||||||||    
T  12272939 cttgcaattagggatcgtttaaaaattggtctctgtaatcgctaatccttgcaaactagccttgcaattattaatcatttaaaatttcgtcctttgacca 12273038  T
Q  138 acttaatcactgccac 153  Q
    | ||||||||||||||    
T  12273039 atttaatcactgccac 12273054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 12443399 - 12443518
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| | ||||||||||| || ||||  ||  |||||| |  ||||||||||||||||||||||||||||||    
T  12443399 cttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctttgacca 12443498  T
Q  138 acttaatcactgccacgtca 157  Q
    | |||||||||| |||||||    
T  12443499 atttaatcactgtcacgtca 12443518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 13186466 - 13186347
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| || | |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||||||| ||||||||    
T  13186466 cttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcatttgacca 13186367  T
Q  138 acttaatcactgccacgtca 157  Q
    | ||||||||||||||||||    
T  13186366 agttaatcactgccacgtca 13186347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 23663566 - 23663685
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| ||| |||| || | ||  || ||||| | |  ||||||||||||||||||||||||||||||    
T  23663566 cttgcaattaggggtcgtttaaaaattggtccctgtattcgttaatccttggaaactaaccttgaaatcattaatcatttaaaatttcgtcctttgacca 23663665  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  23663666 acttaatcactgccacgtca 23663685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 38845702 - 38845559
Alignment:
Q  11 ttttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgttta 110  Q
    ||||| || ||| |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||    
T  38845702 tttttaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgtta 38845603  T
Q  111 atcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    ||||||||||||||||||| |   || |||||||||||||||||    
T  38845602 atcatttaaaatttcgtccctctccccacttaatcactgccacg 38845559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 40317985 - 40318104
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||  |||| |||||||| || ||||  || ||||||| |  |||||||||||||||| |||| ||||||||    
T  40317985 cttgcaattaggggtcgtttaaaaatttgtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaattgcgtcatttgacca 40318084  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  40318085 acttaatcactgccacgtca 40318104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 36325237 - 36325371
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || ||| |||||||| ||  |||||||||| |||| |||||| | |||| ||||||||||| ||||||| |  ||||||||||||    
T  36325237 ttaatgatgtgattagtccttacaattaggggtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaa 36325336  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |   || |||||||||||||||||    
T  36325337 aatttcgtccctctccccacttaatcactgccacg 36325371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 157
Target Start/End: Complemental strand, 36928866 - 36928764
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |||  |||| | |||||| || ||||  || ||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||    
T  36928866 tttaaaaattggtctatgtatttgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 36928767  T
Q  155 tca 157  Q
    |||    
T  36928766 tca 36928764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 38862672 - 38862754
Alignment:
Q  71 tgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||| |   || ||||||||||||||||    
T  38862672 tgtaatcgctaatactggtaatttacctttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccac 38862754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 38955741 - 38955811
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||    
T  38955741 tttaaaaattggtcattgtaatcgctaatcctggtaatttacccctgcattgtttaatcatttaaaatttc 38955811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 153
Target Start/End: Complemental strand, 2266882 - 2266753
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||| |||||||||    
T  2266882 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 2266783  T
Q  124 tcgtcctttgaccaacttaatcactgccac 153  Q
    |  |||||||||||| ||||||||| ||||    
T  2266782 tgatcctttgaccaaattaatcacttccac 2266753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 11761963 - 11762020
Alignment:
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  11761963 ttaatcactgccacgtcatcaaattagcaaaatagcatgggaatggacaaaaataccc 11762020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 22915408 - 22915529
Alignment:
Q  36 ttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgac 135  Q
    |||||||||||||   | ||||||||||| |||| ||||||||||||| || ||||  || ||||||| |  ||||||||||| ||||||||| ||||||    
T  22915408 ttcttgcaattagagatcatttaaaaattggtccatgtaatcgctaatccttgcaaactagccttgcaatcattaatcatttacaatttcgtcttttgac 22915507  T
Q  136 caacttaatcactgccacgtca 157  Q
    ||| ||||||| ||||||||||    
T  22915508 caatttaatcattgccacgtca 22915529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 34213887 - 34213944
Alignment:
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  34213887 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 34213944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 157
Target Start/End: Original strand, 35756606 - 35756722
Alignment:
Q  40 tgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaac 139  Q
    |||||||||| || ||||||||||| ||| || ||||| ||||| ||| ||||||| ||||| ||||||||||||||||||||||||||| |   || ||    
T  35756606 tgcaattaggggtcatttaaaaattggtc-ttataatcactaatcctgacaatttatccttgaattgtttaatcatttaaaatttcgtccctctccccac 35756704  T
Q  140 ttaatcactgccacgtca 157  Q
    ||||||||||||| ||||    
T  35756705 ttaatcactgccatgtca 35756722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 157
Target Start/End: Original strand, 40775657 - 40775790
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| || | |||||| | |||| |||||| |||| || |||| |  |||||| |||||||||    
T  40775657 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgttcctgtaattgttaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 40775756  T
Q  124 tcgtcctttgaccaacttaatcactgccacgtca 157  Q
    | |||||| |||||| ||||||||||||||||||    
T  40775757 tggtccttggaccaaattaatcactgccacgtca 40775790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 34665894 - 34665950
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  34665894 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 34665950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 36186439 - 36186359
Alignment:
Q  73 taatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| |   || ||||||||||||||||    
T  36186439 taatcgctaatcctgacaatttacctttgcattgtttaatcatttaaaatttcgtccctctccctacttaatcactgccac 36186359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 38956079 - 38955960
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| |||||||| || | ||  || ||||||| |  ||||||||||||||||| ||||||||| ||    
T  38956079 cttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgtaaactagccttgcaatcattaatcatttaaaatttagtcctttgatca 38955980  T
Q  138 acttaatcactgccacgtca 157  Q
    |||||||||||| |||||||    
T  38955979 acttaatcactgtcacgtca 38955960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 39072031 - 39071934
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    |||||||||| |||| |||| ||| |||| || ||||  || ||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  39072031 tttaaaaattggtccctgtattcg-taatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 39071934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 8746319 - 8746464
Alignment:
Q  12 tttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaa 111  Q
    ||||||| ||||  ||||||||| | | |||||||||| || ||||||||||  |||  |||||||| ||||  || ||| |||||||||||    ||||    
T  8746319 tttttggcttaagtatgtgtttcctccctgcaattaggggtcatttaaaaatcggtcactgtaatcgttaatcgtgacaaattacccttgcaaaccttaa 8746418  T
Q  112 tcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||||||||||||  |||||| |||||||||| |||||||||    
T  8746419 tcatttaaaatttcgtcacttgacccacttaatcaccgccacgtca 8746464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 35756919 - 35756870
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  35756919 ttaatcatttaaaatttcgtcctttgaccaacttaagcactgccacgtca 35756870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 34214504 - 34214448
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||    
T  34214504 taatcactgccacatcatcaaattagcaaaatggcatgggaattgacaaaaataccc 34214448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 34666517 - 34666461
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||||||||||||||||||||||||||||||||| || | |||||||||||||    
T  34666517 taatcactgccacgtcatcaaattagcaaaatggcatgagaattgacaaaaataccc 34666461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 40776026 - 40775910
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||||||  ||||||||||| |||| |||||| |||||| ||| || |||| || |||| |  |||||||||||||||||||||| |   ||     
T  40776026 cttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttcgtccctctcccc 40775927  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  40775926 acttaatcactgccacg 40775910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #92
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 44407257 - 44407117
Alignment:
Q  14 tttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatc 113  Q
    ||||| ||| |||||||||| |  ||||||||||||||  |||||||||||  ||| |||||| |||||| || ||| |||| || |||| |  ||||||    
T  44407257 tttggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcctagcattttaaccctgcaattgttaatc 44407158  T
Q  114 atttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||||||||| |   || |||||||||||||||||    
T  44407157 atttaaaatttcgtccctctccccacttaatcactgccacg 44407117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #93
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 34685664 - 34685546
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||||  |  |||||||||| ||| ||||| |||||||| || ||||  || |||| || |  ||||||||||||||||||||| ||||||||    
T  34685664 cttgcaattagggatcgtttaaaaattggtc-ttgtattcgctaatccttgcaaactagccttacaatcattaatcatttaaaatttcgtcatttgacca 34685566  T
Q  138 acttaatcactgccacgtca 157  Q
    |||||||||||| |||||||    
T  34685565 acttaatcactgtcacgtca 34685546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #94
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 35449985 - 35449894
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  ||||||||||||||||||||||    
T  35449985 cttgcaattaggcggcatttaaaaattcgtccatgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtcc 35449894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #95
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 2266499 - 2266629
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||  |||||| |||||| |||||| |||| || |||| |  |||||| |||||||||    
T  2266499 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 2266598  T
Q  124 tcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||| |   || |||||||||||||||||    
T  2266599 tcgtccctctccccacttaatcactgccacg 2266629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #96
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 157
Target Start/End: Original strand, 9337048 - 9337166
Alignment:
Q  39 ttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaa 138  Q
    ||||||||||  || |||| |||||| ||||||||||||| ||||| |||||| |||||||| ||  |||||||||||||| | || |||| |  ||| |    
T  9337048 ttgcaattagaggtcattttaaaattggtccttgtaatcgttaattttggcaaattaccctttcaaagtttaatcatttaagaattggtccctcaaccta 9337147  T
Q  139 cttaatcactgccacgtca 157  Q
     ||||||||||||||||||    
T  9337148 gttaatcactgccacgtca 9337166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #97
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 157
Target Start/End: Original strand, 31608593 - 31608653
Alignment:
Q  97 ccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||||  ||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  31608593 ccttgcattcattaataatttaaaatttcgtcatttgacaaacttaatcactgccacgtca 31608653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #98
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 42803625 - 42803542
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaa 121  Q
    |||||||||||  ||  |||||||||| |||| | ||||| | |||  ||||||||||||||||||||||||||||||||||||    
T  42803625 cttgcaattagaagtcgtttaaaaattggtccctataatcaccaatcgtggcaatttacccttgcattgtttaatcatttaaaa 42803542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #99
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 4994679 - 4994796
Alignment:
Q  39 ttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaa 138  Q
    |||||||||||  || ||||||||||  ||  |||| |||||||| || | ||  || ||||||| |  ||||| ||||||||||||||| |||||||||    
T  4994679 ttgcaattagggattgtttaaaaattgatctctgtattcgctaatccttggaaactagccttgcaatcattaattatttaaaatttcgtcttttgaccaa 4994778  T
Q  139 cttaatcactgccacgtc 156  Q
    |||||||||| |||||||    
T  4994779 cttaatcactaccacgtc 4994796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #100
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 10749927 - 10749850
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgca 103  Q
    ||||||||||| ||||||||||||  | ||||||||||| |||| |||||||| |||| ||| ||| |||||||||||    
T  10749927 atgtgtttcgtccttgcaattagggatcatttaaaaattggtccatgtaatcgttaatcctgtcaaattacccttgca 10749850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #101
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 6472438 - 6472395
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaat 63  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||    
T  6472438 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaat 6472395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #102
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 7295317 - 7295214
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||  |||| |||| |||||||| || ||||  ||  |||||||| ||||||| ||||||||||| |||||||||| | | ||| |||||||||    
T  7295317 tttaaaaatcggtccctgtattcgctaatccttgcaaactagtcttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacg 7295218  T
Q  155 tcat 158  Q
    ||||    
T  7295217 tcat 7295214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #103
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 148
Target Start/End: Original strand, 34060510 - 34060620
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||  |||  |||||||||| |||| ||||||||||||| || |||| ||  | ||||||| ||||||||||||||| ||| ||| |  ||||    
T  34060510 cttgcaattaaacgtcgtttaaaaattggtccatgtaatcgctaatccttgcaaattgtcgttgcattctttaatcatttaaaacttcatccctcaacca 34060609  T
Q  138 acttaatcact 148  Q
    | |||||||||    
T  34060610 agttaatcact 34060620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #104
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 4405753 - 4405802
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||| |||| |||||||||| |||||||||||||||||||| |||||||    
T  4405753 ttaattattttaaatttcgtcatttgaccaacttaatcactgtcacgtca 4405802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #105
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 8747601 - 8747552
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||||||||||||||||| || ||| |||||||||| |||||||||    
T  8747601 ttaatcatttaaaatttcgtcccttaacccacttaatcaccgccacgtca 8747552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #106
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 149
Target Start/End: Original strand, 36186192 - 36186233
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 149  Q
    ||||| ||||||||||||||| ||||||||||||||||||||    
T  36186192 ttaattatttaaaatttcgtcttttgaccaacttaatcactg 36186233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #107
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 11763095 - 11762995
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| | |||||||| |  | ||||||||||| |||||||||||||||||| ||| ||| || | | ||||    ||||||||||||||||||    
T  11763095 atgtgtttcgtccctgcaattaaggatcatttaaaaattggtccttgtaatcgctaatcctgacaaattgctcctgcaaacgttaatcatttaaaatttc 11762996  T
Q  126 g 126  Q
    |    
T  11762995 g 11762995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #108
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 20385589 - 20385680
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  ||  |||||| |  ||||||||||||||||||||||    
T  20385589 cttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcc 20385680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #109
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 20386837 - 20386746
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || ||| ||| |  ||||||||||||||||||||||    
T  20386837 cttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagcctcgcaattattaatcatttaaaatttcgtcc 20386746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #110
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 146
Target Start/End: Complemental strand, 43181542 - 43181451
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatca 146  Q
    ||||||||||  ||| || ||||| |||| || | || ||| |||| |||||||||||||||||||||||||| | | ||||||||| ||||    
T  43181542 tttaaaaattgatccatgcaatcgttaatccttgtaaattagccttacattgtttaatcatttaaaatttcgttcctcgaccaacttgatca 43181451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #111
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 30459367 - 30459485
Alignment:
Q  13 ttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaat 112  Q
    |||||| ||||  |||| |||| | ||| |||||||||||  ||||||||||||||  |||| || ||||| || |||| ||||  ||||||| ||||||    
T  30459367 ttttggcttaaatatgtatttcatccttacaattaggcgtcgtttaaaaattagtctatgtattcactaatccttgcaaattacaattgcattctttaat 30459466  T
Q  113 catttaaaatttcgtcctt 131  Q
    || |||||| || ||||||    
T  30459467 cacttaaaaattggtcctt 30459485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #112
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 16388652 - 16388697
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    ||||| |||||||||||||| |||||| ||||||||||||| ||||    
T  16388652 ttaattatttaaaatttcgtgctttgatcaacttaatcactaccac 16388697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 175; Significance: 3e-94; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 221790 - 222022
Alignment:
Q  16 tggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcat 115  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  221790 tggtttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagtc-ttgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 221888  T
Q  116 ttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaa 215  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||| | ||    
T  221889 ttaaaatttcgtcctttgac-aacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatgaacaaaaataccctcatcatccattcttgaa 221987  T
Q  216 atgacatttttacccatgacttcatcttcatctca 250  Q
    |||||||||||| || || |||||||||| |||||    
T  221988 atgacatttttatccctgtcttcatcttcttctca 222022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 222221 - 222030
Alignment:
Q  11 ttttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgttta 110  Q
    ||||| || ||||||||||||||||| ||||||||||||||| |||||||||||||| | ||||||||||||| ||| ||||||||||||||||||||||    
T  222221 tttttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtacatgtaatcgctaatcctgacaatttacccttgcattgttta 222122  T
Q  111 atcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  222121 atcatttaaaatttcgtcctttgaccaacttaatcactgccaagtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcgtc 222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 175; Significance: 3e-94; HSPs: 117)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 17544471 - 17544241
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||||    
T  17544471 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaa 17544372  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    ||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  17544371 aattttgtcctttgaccaacttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatccattcgtgaaatga 17544272  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    ||||||||||| || |||||||||| |||||    
T  17544271 catttttacccctgtcttcatcttcttctca 17544241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 20153338 - 20153111
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||    
T  20153338 ttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccttgtaatcgctaatc---gcaatttacccttgcattgtttaatcatttaa 20153242  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||  ||||||    
T  20153241 aatttcatcctttgaccaacttaatcactgctacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcgtcatccattcgcgaaatga 20153142  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    ||||||||||| |  |||||||||| |||||    
T  20153141 catttttacccctatcttcatcttcttctca 20153111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 33871761 - 33871532
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||||||  |||||||  |||| |||||||||||||||||||||||||||||||||||    
T  33871761 ttaatgatgtgtttcgtccttgcaattaggcgccatttaaaaattagtctctgtaatcagtaatcctggcaatttacccttgcattgtttaatcatttaa 33871662  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||| |||||||| ||||||||||||||| ||||||    
T  33871661 aatttcgtcatttgaccaacttaatcactgctacgtcatcaaattagcaaaatgacatgggaatggac-aaaataccatcgtcatccattcgtgaaatga 33871563  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
     |||||||||| || |||||||||| |||||    
T  33871562 tatttttacccctgtcttcatcttcttctca 33871532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 33871336 - 33871524
Alignment:
Q  14 tttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatc 113  Q
    ||||| |||||||||||||| || |||||||||| | || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33871336 tttggcttaatgatgtgttttgtccttgcaattaagtgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacccttgcattgtttaatc 33871435  T
Q  114 atttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||| | ||||||||||||||||||||    
T  33871436 atttaaaatttcgtcctttgaccaacttaatcaccgccaagtcatcaaactagcaaaatggcatggaaatggacaaaaataccctcgtc 33871524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 20152778 - 20152965
Alignment:
Q  14 tttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatc 113  Q
    ||||| ||||||||||||||||| | |||||||| |||| |||||||||||||||  ||||||||||||| |||| ||||||||||||||||||||||||    
T  20152778 tttggcttaatgatgtgtttcgtccatgcaattaagcgtcatttaaaaattagtctctgtaatcgctaatcctggaaatttacccttgcattgtttaatc 20152877  T
Q  114 atttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||| |||||| || |||||||||||||||||    
T  20152878 atttaaaatttcgtcctttgaccaacttaatcactaccaagtcatcaaattagc-aaatggtatgggaatgaacaaaaataccctcgtc 20152965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 20 - 186
Target Start/End: Original strand, 8875452 - 8875618
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| |||||||||| |||| |||||||||||||||| |||||||| |||| |||||||||||| ||||||||||||||||||||||    
T  8875452 ttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacacttgcattgtttaatcatttaa 8875551  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtgga 186  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||    
T  8875552 aatttcgttctttgaccaacttaatcactgccacgtcatcaaattagtaaaatggcataggaatgga 8875618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 39 - 202
Target Start/End: Original strand, 22298564 - 22298727
Alignment:
Q  39 ttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaa 138  Q
    |||||||||||||| |||||||||||||||| |||||||||||||   |||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  22298564 ttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcggggcaatttacccttacattgtttaatcatttaaaatttcatcctttgaccaa 22298663  T
Q  139 cttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||||||| ||| |||||||||||||||||||| ||||||| | ||||||||||||||||||    
T  22298664 cttaatcactaccaagtcatcaaattagcaaaatgacatgggaattgacaaaaataccctcgtc 22298727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 46 - 202
Target Start/End: Original strand, 17544077 - 17544233
Alignment:
Q  46 taggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatc 145  Q
    ||||||| |||||||||||||||| |||||| |||||| ||| |||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  17544077 taggcgtgatttaaaaattagtccctgtaattgctaatcctgacaatttactcttgcattgtttaatcatttaaaattttgtcatttgaccaacttaatc 17544176  T
Q  146 actgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||| || |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17544177 actgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtc 17544233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 21288085 - 21287904
Alignment:
Q  15 ttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatca 114  Q
    |||| |||||||||||||| || |||| |||||| |||  ||||||||||| ||| |||||||||||||  |||||||  ||||||||||||||||||||    
T  21288085 ttggcttaatgatgtgttttgtccttgtaattagacgtcgtttaaaaattaatccatgtaatcgctaatcatggcaatacacccttgcattgtttaatca 21287986  T
Q  115 tttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaatacc 196  Q
    ||||||||||| |||||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||||||    
T  21287985 tttaaaatttcttcctttgaccaacttaatcaccaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaatacc 21287904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 67 - 179
Target Start/End: Original strand, 21287793 - 21287905
Alignment:
Q  67 tccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattag 166  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||    
T  21287793 tccttgtaatcgctaattctggcaatttacccttgtattgtttaatcatttaaaatttcgtcatttgaccaacttaatcactaccacgtcattaaattag 21287892  T
Q  167 caaaatggcatgg 179  Q
    |||||||||||||    
T  21287893 caaaatggcatgg 21287905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 38 - 206
Target Start/End: Complemental strand, 11741924 - 11741756
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||| ||||||| || ||||||||||  |||  |||| ||||||||  | ||||  || ||||||||| ||||||||||||||||||||||||||||||     
T  11741924 cttgtaattaggggtcatttaaaaatcggtctctgtattcgctaatctttgcaaactagccttgcattctttaatcatttaaaatttcgtcctttgaccc 11741825  T
Q  138 acttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatcc 206  Q
    | |||||||||| || |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||    
T  11741824 agttaatcactgtcaggtcatcaaattagcaaaatggcattggaatggacaaaaataccctcatcatcc 11741756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 5993910 - 5994029
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |   ||     
T  5993910 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccc 5994009  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||| ||||    
T  5994010 acttaatcactgccatgtca 5994029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 41930913 - 41930773
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||||||||| || || |||| |||||||||| ||||||||||| |||| |||||| |||||| || |||||||| ||||||| |  |||||||||    
T  41930913 ggtttaatgatgtgattagtccttgtaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaatcatt 41930814  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||| |||||| |||||||||||||||| ||||||||    
T  41930813 taaaatttggtccttggaccaacttaatcactaccacgtca 41930773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 6757862 - 6758005
Alignment:
Q  14 tttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatc 113  Q
    ||||||||| ||| ||| || || ||||||||||||||| ||||||||||| |||| |||||| |||||| |||||||||||  || ||| |  ||||||    
T  6757862 tttggtttattgacgtgattagtccttgcaattaggcgtcatttaaaaatttgtccctgtaattgctaatcctggcaatttagtctcgcaattgttaatc 6757961  T
Q  114 atttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||| |||||| |||||||||||||||||||||||||    
T  6757962 atttaaaatttggtccttggaccaacttaatcactgccacgtca 6758005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 42 - 153
Target Start/End: Original strand, 16083002 - 16083113
Alignment:
Q  42 caattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaactt 141  Q
    |||||||| ||| ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| | |   |||||||    
T  16083002 caattaggggttgtttaaaaattagtccctgtaatcgataatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtacctctcccaactt 16083101  T
Q  142 aatcactgccac 153  Q
    ||||||||||||    
T  16083102 aatcactgccac 16083113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 24547532 - 24547413
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |   ||     
T  24547532 cttgcaattaggggtcgtttaaaaattggtccttataatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccc 24547433  T
Q  138 acttaatcactgccacgtca 157  Q
    |||||| |||||||||||||    
T  24547432 acttaaccactgccacgtca 24547413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 153
Target Start/End: Original strand, 35512142 - 35512284
Alignment:
Q  11 ttttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgttta 110  Q
    ||||| |||||||  |||| |||| | |||||||||| | ||  |||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||    
T  35512142 tttttaggtttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgttta 35512241  T
Q  111 atcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    ||||||||||||||||||| |   || ||||||||||||||||    
T  35512242 atcatttaaaatttcgtccctctccccacttaatcactgccac 35512284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 39 - 153
Target Start/End: Original strand, 38442090 - 38442204
Alignment:
Q  39 ttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaa 138  Q
    ||||||||||| |||||||||||||| ||| |||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||| |   || |    
T  38442090 ttgcaattaggggttatttaaaaattggtcattgtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtccctctcccca 38442189  T
Q  139 cttaatcactgccac 153  Q
    |||||||||||||||    
T  38442190 cttaatcactgccac 38442204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 3656841 - 3656743
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcattta 118  Q
    ||||||||||||||||  ||||||||||| ||| ||||||||||||||| ||||||||||||||||||  |||||| ||||||||||||||||||||||    
T  3656841 ttaatgatgtgtttcgaccttgcaattagacgtcatttaaaaattagtctttgtaatcgctaattctgataatttatccttgcattgtttaatcattta 3656743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 11761770 - 11761886
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |   ||     
T  11761770 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccatctcccc 11761869  T
Q  138 acttaatcactgccacg 154  Q
    ||||||||| |||||||    
T  11761870 acttaatcattgccacg 11761886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 32242648 - 32242530
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||| |||||||||||||||| ||| |||||||| || ||||  || ||||||| |  ||||||||||||||||| ||||||||||||    
T  32242648 cttgcaattaggggttgtttaaaaattagtcct-gtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaattttgtcctttgacca 32242550  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  32242549 acttaatcactgccacgtca 32242530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 38475406 - 38475291
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||| |   ||     
T  38475406 cttgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccc 38475307  T
Q  138 acttaatcactgccac 153  Q
    ||||||||||||||||    
T  38475306 acttaatcactgccac 38475291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 39453321 - 39453412
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||||| ||  |||||||||| |||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39453321 cttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 39453412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 39453706 - 39453587
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| || ||||||||||| |||| |||| ||||||||  | ||||  || ||||||| |  ||||||||||||||||||||||||||||||    
T  39453706 cttgcaattaggggtcatttaaaaattggtccctgtattcgctaatctttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacca 39453607  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  39453606 acttaatcactgccacgtca 39453587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 6758259 - 6758125
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || |||||||||||||||  |||||||||| |||| |||||| | |||||||||||||||| ||||||| |  ||||||||||||    
T  6758259 ttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaattctggcaatttaaccttgcaattgttaatcatttaa 6758160  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |   || |||||||||||||||||    
T  6758159 aatttcgtccctctccccacttaatcactgccacg 6758125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 13362634 - 13362549
Alignment:
Q  39 ttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaattt 124  Q
    ||||||||||| ||  |||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  13362634 ttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcatggcaatttacccttgcattgtttaatcatttaaaattt 13362549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 129
Target Start/End: Original strand, 186439 - 186531
Alignment:
Q  37 tcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    ||||| ||||||| ||  |||||||||||||| ||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  186439 tcttgaaattaggggtcgtttaaaaattagtcattgtaatcgttaattctggaaatttaaccttgcattgtttaatcatttaaaatttcgtcc 186531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 1506364 - 1506224
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||| |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||| ||    
T  1506364 ggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 1506265  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||| |||||| |||||| ||||||||||||||||||    
T  1506264 taaaatttggtccttggaccaaattaatcactgccacgtca 1506224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 3529249 - 3529133
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||||||| |||| |||||||||||||| | |||||||||||||||||||||||||||| |   ||     
T  3529249 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgtttaatcatttaaaatttcgtccctctcccc 3529150  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  3529149 acttaatcactgccacg 3529133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 202
Target Start/End: Original strand, 20153031 - 20153103
Alignment:
Q  130 tttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20153031 tttgaccaacttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtc 20153103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 27587169 - 27587285
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| ||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||| |   ||     
T  27587169 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcatcgtttaatcatttaaaatttcgtccctctcccc 27587268  T
Q  138 acttaatcactgccacg 154  Q
    | |||||||||||||||    
T  27587269 atttaatcactgccacg 27587285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 157
Target Start/End: Original strand, 31482398 - 31482542
Alignment:
Q  13 ttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaat 112  Q
    |||||| ||| |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||    
T  31482398 ttttggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaat 31482497  T
Q  113 catttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    | |||||||||| |||||| |||||| ||||||||||||||||||    
T  31482498 cgtttaaaatttggtccttggaccaaattaatcactgccacgtca 31482542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 43159242 - 43159102
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||  |||| |||| | |||||||||||| ||  |||||||||| ||| ||||| |||||||| ||  |||  || ||||||| |  |||||||||    
T  43159242 ggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcgttgtattcgctaatccttacaaactagccttgcaatcattaatcatt 43159143  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  43159142 taaaatttcgtcctttgaccaacttaatcactgccacgtca 43159102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 5024425 - 5024310
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| ||| |||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||| | |   ||     
T  5024425 cttgcaattaggggtcgtttaaaaattggtcattgtaatcgctaatcctgacaatttaccattgcattgtttaatcatttaaaatttcgttcctctcccc 5024326  T
Q  138 acttaatcactgccac 153  Q
    ||||||||||||||||    
T  5024325 acttaatcactgccac 5024310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 6150827 - 6150708
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  ||||||||||||||| |||| ||| ||||  | ||||  || ||||||| |  ||||||||||||||||||||||||||||||    
T  6150827 cttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatctttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacca 6150728  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  6150727 acttaatcactgccacgtca 6150708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 11762124 - 11762005
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||| ||||||||||||    
T  11762124 cttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgacca 11762025  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  11762024 acttaatcactgccacgtca 11762005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 13962885 - 13962976
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||||| ||  |||||||||| |||| |||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  13962885 cttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatcctggtaatttacccttgcattgtttaatcatttaaaatttcgtcc 13962976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 27587522 - 27587403
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| ||||||||| |||||||| || ||||  || ||||||| |  ||||||||||||||||| ||||||||||||    
T  27587522 cttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgacca 27587423  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||| ||||||    
T  27587422 acttaatcactgctacgtca 27587403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 32242263 - 32242382
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  ||||||||||  ||| |||||| ||||||  ||||||||||| |||||||||||||||||||||||||||||||| |   ||     
T  32242263 cttgcaattaggggtcgtttaaaaattgatccctgtaatagctaatcatggcaatttactcttgcattgtttaatcatttaaaatttcgtccctctcccc 32242362  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  32242363 acttaatcactgccacgtca 32242382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 157
Target Start/End: Original strand, 28269444 - 28269562
Alignment:
Q  39 ttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaa 138  Q
    ||||||||||| ||  |||||||||| ||||  ||| |||||||| || ||||  || ||||||| |  |||||||||||||||||||||||||||||||    
T  28269444 ttgcaattaggggtcgtttaaaaattggtcccagtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaa 28269543  T
Q  139 cttaatcactgccacgtca 157  Q
    |||||||||||||||||||    
T  28269544 cttaatcactgccacgtca 28269562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 3528894 - 3529013
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| | |||||| || ||||  || ||||||| |  ||||||||||||||||| ||||||||||||    
T  3528894 cttgcaattaggggtcgtttaaaaattggtccctgtatttgctaatccttgcaaactagccttgcaatcgttaatcatttaaaatttagtcctttgacca 3528993  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  3528994 acttaatcactgccacgtca 3529013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 14194444 - 14194559
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  ||  |||||| |  ||||||||||||||||||||||||||||||    
T  14194444 cttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctttgacca 14194543  T
Q  138 acttaatcactgccac 153  Q
    ||||||||||||||||    
T  14194544 acttaatcactgccac 14194559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 19892715 - 19892596
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||  ||  |||||||||| |||  |||||||| |||| ||  |||||||||||||||||||||||||||||||||||||||| ||   ||     
T  19892715 cttgcaattagaggtcgtttaaaaattggtctctgtaatcgttaatcctaacaatttacccttgcattgtttaatcatttaaaatttcgtcattctcccc 19892616  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  19892615 acttaatcactgccacgtca 19892596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 20814542 - 20814423
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||  ||||||||||||| || ||||||||| ||||||||||||||||||||||||||| |||| |   ||     
T  20814542 cttgcaattaggggtcgtttaaaaattggtcactgtaatcgctaatcctagcaatttacacttgcattgtttaatcatttaaaattttgtccctctccct 20814443  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||| ||||    
T  20814442 acttaatcactgccatgtca 20814423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 20840554 - 20840673
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| || | |||||||| |||| || ||||||||||||||||||||||||| ||||||||||| |||| |   ||     
T  20840554 cttgcaattaggggtcgtttaaaaattggtacctgtaatcgttaatcctagcaatttacccttgcattgtttaatgatttaaaattttgtccctctcccc 20840653  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  20840654 acttaatcactgccacgtca 20840673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 54 - 157
Target Start/End: Original strand, 38475070 - 38475173
Alignment:
Q  54 atttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    ||||||||||| |||| |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||||||| ||||||||||||||||||||||||    
T  38475070 atttaaaaattggtccatgtattcgctaatccttgcaaactaaccttgcaatcattaatcatttaaaatttcgtcatttgaccaacttaatcactgccac 38475169  T
Q  154 gtca 157  Q
    ||||    
T  38475170 gtca 38475173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 157
Target Start/End: Original strand, 5255040 - 5255157
Alignment:
Q  39 ttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaa 138  Q
    ||||||||||  ||| ||| |||||| || | ||||||||||||| ||| ||| ||| |||||||||  ||||||||||||||||||||| |||||||||    
T  5255040 ttgcaattagaggttgtttgaaaattggttcatgtaatcgctaatcctg-caaattaaccttgcatttattaatcatttaaaatttcgtcatttgaccaa 5255138  T
Q  139 cttaatcactgccacgtca 157  Q
    ||||||||||| |||||||    
T  5255139 cttaatcactgtcacgtca 5255157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 157
Target Start/End: Complemental strand, 6301949 - 6301831
Alignment:
Q  39 ttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaa 138  Q
    ||||||||||| ||  |||||||||| ||||||||| ||| |||| || ||||  ||  |||||| |  |||||||||||||||||||||||||||||||    
T  6301949 ttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctttgaccaa 6301850  T
Q  139 cttaatcactgccacgtca 157  Q
     ||||||||||||||||||    
T  6301849 tttaatcactgccacgtca 6301831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 17202833 - 17202687
Alignment:
Q  11 ttttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgttta 110  Q
    |||||||| ||||  |||| |||| | |||||||||||| ||  |||||||||  |||| |||| |||||||| || ||||  ||  |||||| |  |||    
T  17202833 ttttttggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagtcttgcaatcatta 17202734  T
Q  111 atcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  17202733 atcatttaaaatttcgtcatttgaccaacttaatcactgccacgtca 17202687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 22870471 - 22870374
Alignment:
Q  108 ttaatcatttaaaatttcgtc-ctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatc 205  Q
    ||||||||||||||||||||| || |  || | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||    
T  22870471 ttaatcatttaaaatttcgtctctcttcccga-ttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcatcatc 22870374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 136
Target Start/End: Original strand, 24141461 - 24141571
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| | ||||||||| ||| ||||||||||| |||| |||||||| |||| ||||||| ||| |||||||  ||||||||||||||||||||    
T  24141461 atgtgtttcgtccctgcaattagacgtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatcatttaaaatttc 24141560  T
Q  126 gtcctttgacc 136  Q
     ||| ||||||    
T  24141561 atcccttgacc 24141571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 28771245 - 28771131
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||| ||||||| ||  |||||||||| |||| |||||||||||||  ||||||||||||| || ||||||||||||||||||||||||||| |   ||     
T  28771245 cttgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgtattgtttaatcatttaaaatttcgtccctctcccc 28771146  T
Q  138 acttaatcactgcca 152  Q
    |||||||||||||||    
T  28771145 acttaatcactgcca 28771131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 41930519 - 41930653
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || |||||||||||  ||  |||||||||| |||| |||||| |||||| ||||||||||| ||||||| |  ||||||||||||    
T  41930519 ttaatgatgtgattagtccttgcaattagaggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 41930618  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |   || |||||||||||||||||    
T  41930619 aatttcgtccctctccccacttaatcactgccacg 41930653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 30005158 - 30005283
Alignment:
Q  22 aatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaa 121  Q
    |||||||| |||| |  ||||||||||| || |||||||||||||| | | |||| |||||| ||| ||||||||  ||||||| |||||||||||||||    
T  30005158 aatgatgtttttcatatttgcaattaggtgtcatttaaaaattagttcatataattgctaatcctgacaatttacatttgcattatttaatcatttaaaa 30005257  T
Q  122 tttcgtcctttgaccaacttaatcac 147  Q
    |||  || ||||||||||||||||||    
T  30005258 ttttatcttttgaccaacttaatcac 30005283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 18247107 - 18247196
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||||| ||  |||||||||| |||| ||||||||||||||  ||||||||||||||||||| |||||||||||| ||||||||||    
T  18247107 cttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatt--ggcaatttacccttgcattatttaatcatttagaatttcgtcc 18247196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 35920588 - 35920500
Alignment:
Q  41 gcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    ||||||||| ||  |||||||||| |||| ||||||||||||| ||| ||||||| |||| ||||||||||||||||||||||||||||    
T  35920588 gcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttatccttccattgtttaatcatttaaaatttcgtcc 35920500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 8322811 - 8322692
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| ||||  ||| ||| |||| || ||||  || ||||||| |  ||||||||||||||||||||||||||||||    
T  8322811 cttgcaattaggggtcgtttaaaaattggtccccgtattcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacca 8322712  T
Q  138 acttaatcactgccacgtca 157  Q
    |||||||||||||| |||||    
T  8322711 acttaatcactgccgcgtca 8322692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 16156876 - 16156995
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||  |||| ||| |||| || ||||  ||  |||||| |  ||||||||||||||||||||||||||||||    
T  16156876 cttgcaattaggggtcgtttaaaaattggtctatgtattcgttaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctttgacca 16156975  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  16156976 acttaatcactgccacgtca 16156995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 16157262 - 16157171
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||||| ||  |||||||||| |||| | |||||| |||| ||| |||||||||||||||||||||||||||||||||||| ||||    
T  16157262 cttgcaattaggggtcgtttaaaaattggtccctataatcgttaatcctgacaatttacccttgcattgtttaatcatttaaaattttgtcc 16157171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 17202424 - 17202511
Alignment:
Q  42 caattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||| ||  |||||||||| |||  ||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||    
T  17202424 caattaggggtcgtttaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaagcatttaaaatttcgtcc 17202511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 19518014 - 19517895
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  ||||||||||||||| |||| ||||||||  | ||||  || ||||||| |  ||||||||||||||||| ||| ||||||||    
T  19518014 cttgcaattaggggtagtttaaaaattagtccatgtattcgctaatctttgcaaactagccttgcaatcattaatcatttaaaattttgtcttttgacca 19517915  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||| ||||    
T  19517914 acttaatcactgccatgtca 19517895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 22869728 - 22869787
Alignment:
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  22869728 ttaatcactgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaataccctc 22869787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 6301581 - 6301683
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| ||||||||| |||||||| || ||||  ||  |||||| |  ||||| ||||||||||||||||||||||||| |||||||||||||||    
T  6301581 tttaaaaattggtccttgtattcgctaatccttgcaaactagtcttgcaatcattaattatttaaaatttcgtcctttgaccaatttaatcactgccacg 6301680  T
Q  155 tca 157  Q
    |||    
T  6301681 tca 6301683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 21265181 - 21265283
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||||||| |||| |||| | |||||| || ||||  || ||||||| |  ||||| |||||||||||||||||||||||||||||||||||||||||    
T  21265181 tttaaaaattggtccatgtatttgctaatccttgcaaactagccttgcaatcattaattatttaaaatttcgtcctttgaccaacttaatcactgccacg 21265280  T
Q  155 tca 157  Q
    |||    
T  21265281 tca 21265283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 129
Target Start/End: Complemental strand, 29646736 - 29646678
Alignment:
Q  71 tgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  29646736 tgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcc 29646678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 153
Target Start/End: Original strand, 297021 - 297150
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||| | |||| || |||| |  |||||| |||||||||    
T  297021 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggtattttaaccctgcaattgttaatcgtttaaaatt 297120  T
Q  124 tcgtcctttgaccaacttaatcactgccac 153  Q
    | |||||| |||||| ||||||||||||||    
T  297121 tggtccttggaccaaattaatcactgccac 297150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 297411 - 297274
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||| |||||||||| |  |||| |||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||||||    
T  297411 ggtttattgatgtgtttagcccttgtaattaggcgacatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatt 297312  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    ||||||||||||| |   || |||||||||||||||||    
T  297311 taaaatttcgtccctctccccacttaatcactgccacg 297274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 8875687 - 8875618
Alignment:
Q  23 atgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaat 92  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||| |||||||| |||| ||||||||    
T  8875687 atgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaat 8875618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 11047492 - 11047577
Alignment:
Q  72 gtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||  |   || ||||||||||||||| ||||    
T  11047492 gtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtctctctccccacttaatcactgccatgtca 11047577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 11047774 - 11047725
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11047774 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 11047725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 18670223 - 18670311
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    ||||||| |||| ||  |||||||||| |||| |||||||||||||    ||||||||||||||||||||||||||||||||||||||||||    
T  18670223 cttgcaagtaggggtcgtttaaaaattggtccctgtaatcgctaatc---gcaatttacccttgcattgtttaatcatttaaaatttcgtcc 18670311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 19892329 - 19892446
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| ||| |||| || ||||  || ||||| | |  ||||||||||||||||||||||||||| ||    
T  19892329 cttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgtaatcattaatcatttaaaatttcgtcctttgatca 19892428  T
Q  138 acttaatcactgccacgt 155  Q
    ||||||||||||||||||    
T  19892429 acttaatcactgccacgt 19892446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 14194829 - 14194718
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||| ||||||| ||  |||||||||| | || ||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||| |   ||     
T  14194829 cttgtaattaggggtcgtttaaaaattgg-ccatgtaattactaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccc 14194731  T
Q  138 acttaatcactgc 150  Q
    |||||||||||||    
T  14194730 acttaatcactgc 14194718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 20072245 - 20072301
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  20072245 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 20072301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 20072845 - 20072789
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  20072845 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 20072789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 152
Target Start/End: Complemental strand, 31482792 - 31482664
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  ||||||||||||||||    
T  31482792 tgatgtgtttagcccttgcaattaggcggcatttaaaaatttgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatt 31482693  T
Q  124 tcgtcctttgaccaacttaatcactgcca 152  Q
    |||||| |   || |||||||||||||||    
T  31482692 tcgtccctctccccacttaatcactgcca 31482664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 36477352 - 36477296
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  36477352 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 36477296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 39181772 - 39181716
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  39181772 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 39181716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 5024040 - 5024159
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  ||||||||||  | | |||| |||||||| || ||||  || ||||||| |   |||||||||||||||| ||||||||||||    
T  5024040 cttgcaattaggggtcgtttaaaaattgatacatgtattcgctaatccttgcaaactagccttgcaatcactaatcatttaaaattttgtcctttgacca 5024139  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  5024140 acttaatcactgccacgtca 5024159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 5994296 - 5994177
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||| | ||  |||||||||| || | |||| |||||||| || ||||  ||  |||||| |  ||||||||||||||||||||||||||||||    
T  5994296 cttgcaattaagggtcgtttaaaaattggttcatgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctttgacca 5994197  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||| ||||    
T  5994196 acttaatcactgccatgtca 5994177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 6150475 - 6150566
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||||| ||  |||||||||| || | ||||||| ||||| ||| |||||||  ||||||||||||||||||||||||||||||||    
T  6150475 cttgcaattaggggtcgtttaaaaattggttcatgtaatcactaatcctgacaatttagtcttgcattgtttaatcatttaaaatttcgtcc 6150566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 11740681 - 11740828
Alignment:
Q  11 ttttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgttta 110  Q
    |||||| ||||||  |||| |||| | |||||||||||| ||  ||||||||||  ||| | || |||||||| || ||||  || ||||||||| ||||    
T  11740681 ttttttagtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccatatattcgctaatccttgcaaactagccttgcattcttta 11740780  T
Q  111 atcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcat 158  Q
    |||||||||||||| ||||||||||| | ||||| |||| ||||||||    
T  11740781 atcatttaaaattttgtcctttgacccagttaatgactgtcacgtcat 11740828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 28770890 - 28771009
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || |||| || |  || |||||||||||||| ||| ||||||||    
T  28770890 cttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttacaatcattgatcatttaaaatttagtcatttgacca 28770989  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  28770990 acttaatcactgccacgtca 28771009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 29646383 - 29646502
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||| ||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || |||| || |  |||||||||||||||||  |||||||||||    
T  29646383 cttgtaattaggggtcttttaaaaattggtccatgtattcgctaatccttgcaaactagccttccaatcattaatcatttaaaattttatcctttgacca 29646482  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  29646483 acttaatcactgccacgtca 29646502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 35512521 - 35512406
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| |||| ||| || ||||  || ||||||| |  ||||||||||||||||||||| |||||| |    
T  35512521 cttgcaattaggggtcgtttaaaaattggtccctgtattcgccaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcatttgacta 35512422  T
Q  138 acttaatcactgccac 153  Q
    ||||||||||||||||    
T  35512421 acttaatcactgccac 35512406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 146
Target Start/End: Original strand, 35920266 - 35920357
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatca 146  Q
    |||||||||| |||  |||| |||||||| || |||| ||| ||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  35920266 tttaaaaattggtcaatgtattcgctaatccttgcaaattagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatca 35920357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 1505974 - 1506104
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||| |||||||||    
T  1505974 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 1506073  T
Q  124 tcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||| |   || |||||||||||||||||    
T  1506074 tcgtccctctccccacttaatcactgccacg 1506104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 22298797 - 22298735
Alignment:
Q  188 aaaaataccctcgtcatccattcgtaaaatgacatttttacccatgacttcatcttcatctca 250  Q
    ||||||||||||||||||||||||| ||||||||||||||||| || |||||||||| |||||    
T  22298797 aaaaataccctcgtcatccattcgtgaaatgacatttttacccgtgtcttcatcttcttctca 22298735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 13362318 - 13362367
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13362318 ttaatcatttaaaatttcgtcctctgaccaacttaatcactgccacgtca 13362367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 20814226 - 20814275
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20814226 ttaatcatttaaaatttcgtcctttaaccaacttaatcactgccacgtca 20814275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 16533601 - 16533545
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||||||||||||| |||||||||||||||||||||| | |||||||||||||    
T  16533601 taatcactgccacgtcattaaattagcaaaatggcatgggaattgacaaaaataccc 16533545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 36476889 - 36476945
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    ||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||    
T  36476889 taatcactgccacatcatcaaattagcaaaatggcatgggaattgacaaaaataccc 36476945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 39181181 - 39181237
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||| |||||||||||||||||||||||||||||||| | |||||||||||||    
T  39181181 taatcactaccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 39181237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 186826 - 186707
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||  ||  |||||||||| |||| |||| | ||||||  | ||||  || ||||||| |  ||||||||||||||||||||||||||||||    
T  186826 cttgcaattagaggtcgtttaaaaattggtccctgtatttgctaatctttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacca 186727  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||| || |||||||    
T  186726 acttaatcattgtcacgtca 186707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 28269744 - 28269681
Alignment:
Q  89 caatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgcca 152  Q
    ||||||||||||||||||||||||||||||||||||||||| |   || |||||||||||||||    
T  28269744 caatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgcca 28269681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 38442474 - 38442363
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||  || |||||| ||| |||| || ||||  || ||||||| |  |||| |||||||||||||||||||||||||    
T  38442474 cttgcaattaggggtcgtttaaaaatgggttcttgtattcgttaatccttgcaaactagccttgcaatcattaaccatttaaaatttcgtcctttgacca 38442375  T
Q  138 acttaatcactg 149  Q
    ||||||||||||    
T  38442374 acttaatcactg 38442363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #97
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 20857055 - 20857113
Alignment:
Q  140 ttaatcactgccacgtcatcaaattagc-aaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||    
T  20857055 ttaatcactgccacgtcatcaaattagcaaaaatggcatgggaattgacaaaaataccc 20857113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #98
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 21265532 - 21265458
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaattt-acccttgcattgtttaatcatttaaaatttcgtc 128  Q
    |||||||||| || | |||||||||||||  ||||||||| |||||||||||||||||| |||||||||||||||    
T  21265532 tttaaaaattggttcctgtaatcgctaatcgtggcaattttacccttgcattgtttaattatttaaaatttcgtc 21265458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #99
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 13963166 - 13963121
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  13963166 ttaatcatttaaaatttcgttctttgaccaacttaatcactgccac 13963121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #100
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 18670502 - 18670453
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  18670502 ttaatcatttaaaatttcgtcatttaaccaacttaatcactgccacgtca 18670453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #101
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 16533017 - 16533073
Alignment:
Q  141 taatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||||||||||||| |||||||||||||||||||||| |  ||||||||||||    
T  16533017 taatcactgccacgtcattaaattagcaaaatggcatgggaattcacaaaaataccc 16533073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #102
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 8322473 - 8322516
Alignment:
Q  86 tggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  8322473 tggcaatttatccttgcattgtttaatcatttaaaatttcgtcc 8322516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #103
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 40150233 - 40150106
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| |||||||||||| || |||| |||||| |||| |||||||| |||| || | || |||||||| ||  |||||||||||||| | ||     
T  40150233 atgtgtttcgtccttgcaattaggggtcattttaaaattggtccctgtaatcgttaatcctagaaaattaccctttcaaagtttaatcatttaagaattg 40150134  T
Q  126 gtcctttgaccaacttaatcactgccac 153  Q
    |||| |  ||| | ||||||||||||||    
T  40150133 gtccctcaacctaattaatcactgccac 40150106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #104
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 20857524 - 20857466
Alignment:
Q  140 ttaatcactgccacgtcatcaaattagc-aaaatggcatgggagtggacaaaaataccc 197  Q
    |||||||||||||| ||||||||||||| |||||||||||||| | |||||||||||||    
T  20857524 ttaatcactgccacctcatcaaattagcaaaaatggcatgggaattgacaaaaataccc 20857466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #105
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 150
Target Start/End: Original strand, 27937144 - 27937186
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgc 150  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  27937144 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgc 27937186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #106
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 16083280 - 16083231
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  16083280 ttaatcatttaaaatttcgttatttgaccaacttaatcactgccatgtca 16083231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #107
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 24547281 - 24547326
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  24547281 ttaatcatttaaaatttcgtcatttgaccaatttaatcactgccac 24547326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #108
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 5835859 - 5835748
Alignment:
Q  12 tttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaa 111  Q
    ||||||||||||  |||| |||| | |||||||||||| ||| |||||||||| ||   |||| |||||||| || |||| ||| |||||||   |||||    
T  5835859 tttttggtttaaatatgtatttcatccttgcaattaggagttgtttaaaaattggtttctgtattcgctaatccttgcaaattagccttgcaacatttaa 5835760  T
Q  112 tcatttaaaatt 123  Q
    ||||||||||||    
T  5835759 tcatttaaaatt 5835748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #109
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 21257466 - 21257408
Alignment:
Q  140 ttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccct 198  Q
    ||||| ||| |||| |||||||||||||||||||||||| || ||||||||||| ||||    
T  21257466 ttaattactaccacatcatcaaattagcaaaatggcatgagaatggacaaaaatgccct 21257408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #110
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 10684275 - 10684234
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 149  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  10684275 ttaatcatttaaagtttcgtcatttgaccaacttaatcactg 10684234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #111
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 40148907 - 40149000
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| | |||||||||   | ||||||||||| |||| |||||||| |||| || |||| |||||||| ||  ||||||||||||||    
T  40148907 atgtgtttcgtccctgcaattagagctcatttaaaaattggtccatgtaatcgttaatcctagcaaattaccctttcaaagtttaatcatttaa 40149000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #112
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 42067943 - 42067838
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||| | | |||||||||| || |||||||| || |||| |||||| | |||| |||||||  | ||| ||||   |||||||||||||||||||    
T  42067943 atgtgtttcatccctgcaattaggggtcatttaaaatttggtccctgtaattgataatcctggcaaactgcccctgcaaactttaatcatttaaaatttc 42067844  T
Q  126 gtcctt 131  Q
    ||||||    
T  42067843 gtcctt 42067838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #113
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 20153034 - 20152973
Alignment:
Q  187 caaaaataccctcgtcatccattcgtaaaatgacatttttacccatgacttcatcttcatctca 250  Q
    ||||||||||||||||||||||||   |||||||||||||||||  | |||||||||| |||||    
T  20153034 caaaaataccctcgtcatccattcacgaaatgacatttttaccc--gtcttcatcttcttctca 20152973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #114
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 153
Target Start/End: Complemental strand, 15645050 - 15645004
Alignment:
Q  107 tttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    ||||||||||||||||||||||| |  ||| ||||||||||||||||    
T  15645050 tttaatcatttaaaatttcgtccctacacccacttaatcactgccac 15645004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #115
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 5835661 - 5835730
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaattt 124  Q
    |||||||||| || |||||| ||| ||||  | |||| |||||||||||  |||||||||||||||||||    
T  5835661 tttaaaaattggttcttgtattcgttaatctttgcaaattacccttgcaaagtttaatcatttaaaattt 5835730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #116
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 18247407 - 18247370
Alignment:
Q  121 atttcgtcctttgaccaacttaatcactgccacgtcat 158  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  18247407 atttcttcctttgatcaacttaatcactgccacgtcat 18247370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #117
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 129
Target Start/End: Complemental strand, 5256423 - 5256328
Alignment:
Q  33 tcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 129  Q
    |||| |||||||||||| ||  |||||||||| |||  ||||||  ||||| || |||| ||| |||| ||||  ||||||||||||||||||||||    
T  5256423 tcgtccttgcaattagg-gtcgtttaaaaattggtcaatgtaatgactaatccttgcaaattagccttacatttgttaatcatttaaaatttcgtcc 5256328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 170; Significance: 2e-91; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 12665 - 12432
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||    
T  12665 ggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatt 12566  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaa 216  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||| | |||    
T  12565 taaaatttcgttctttgacctacttaatcactgccacgtcatcaaattagcaaaatgacatgggaatagacaaaaataccatcgtcatccattcttgaaa 12466  T
Q  217 tgacatttttacccatgacttcatcttcatctca 250  Q
    ||||||||||||||||| ||||||| || |||||    
T  12465 tgacatttttacccatgtcttcatcctcttctca 12432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 12243 - 12424
Alignment:
Q  14 tttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatc 113  Q
    |||||||||||||||||||||||  || |||||| || |||| |||||||||||      |||||||||| |||||||||||||||||||||||||||||    
T  12243 tttggtttaatgatgtgtttcgtcgttacaattaagcattatataaaaattagt------aatcgctaatcctggcaatttacccttgcattgtttaatc 12336  T
Q  114 atttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtc 202  Q
    |||||||||||||| ||||||| |||| ||||||| ||| |||||||||||||||||||| ||||| | |||||||||||| |||||||    
T  12337 atttaaaatttcgt-ctttgacaaactaaatcactcccaagtcatcaaattagcaaaatgacatggaaatggacaaaaatatcctcgtc 12424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 20 - 250
Target Start/End: Original strand, 2396 - 2626
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||| ||| |||||||||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||||    
T  2396 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaa 2495  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||    
T  2496 aatttcgtcctttgaccaacttaatcactaccacgttatcaaattagcaaaatggcatgggaatggacaaaaataacatcgtcatccattcgtgaaatga 2595  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
    ||||||||||| || |||||||||| |||||    
T  2596 catttttacccctgtcttcatcttcttctca 2626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 12203 - 11973
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||  ||| |||||||||||| |||  |||||||||||| || ||||||||||||||||||||||||||||||||    
T  12203 ttaatgatgtgtttcgtccttgcaattaaacgtcatttaaaaattaatcccagtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaa 12104  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctcgtcatccattcgtaaaatga 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| | ||||||||||||||  |||||     
T  12103 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaatatcatcgtcatccattcgggaaatgc 12004  T
Q  220 catttttacccatgacttcatcttcatctca 250  Q
     |||||||||| || |||||||||| |||||    
T  12003 aatttttacccctgtcttcatcttcttctca 11973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 144; Significance: 8e-76; HSPs: 3)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 20 - 199
Target Start/End: Original strand, 923 - 1102
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  923 ttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaa 1022  T
Q  120 aatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccctc 199  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||    
T  1023 aatttcgtcctttgaccaacttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 1102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 250
Target Start/End: Complemental strand, 1187 - 1113
Alignment:
Q  176 atgggagtggacaaaaataccctcgtcatccattcgtaaaatgacatttttacccatgacttcatcttcatctca 250  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||| |||||    
T  1187 atgggaatggacaaaaataccctcgtcatccattcgtgaaatgacatttttacccttgtcttcatcttcttctca 1113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 1265 - 1203
Alignment:
Q  13 ttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaa 75  Q
    |||||| ||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||    
T  1265 ttttggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcttgtaa 1203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 10 - 195
Target Start/End: Original strand, 19850 - 20035
Alignment:
Q  10 attttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgttt 109  Q
    ||||||||||||||  |||| |||||| |||||||||| | ||  |||||||||| |||| ||| ||||||||| || |||| ||||| ||||||| |||    
T  19850 attttttggtttaaatatgtatttcgtccttgcaattatgggtcgtttaaaaattggtccctgtgatcgctaatccttgcaaattacctttgcattcttt 19949  T
Q  110 aatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaatac 195  Q
    |||||||||||||||||| | || ||| | ||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  19950 aatcatttaaaatttcgttcattaacctaattaatgactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaatac 20035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 196
Target Start/End: Complemental strand, 6397 - 6227
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||| | |||| ||||||| || | ||||||||| |||||| |||||| |||| || |||| ||||||||||| |||||||||||||||||||||    
T  6397 atgtgtttcttccttgaaattaggggtcacttaaaaattggtccttataatcgataatccttgcaaattacccttgcaatgtttaatcatttaaaatttc 6298  T
Q  126 gtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaatacc 196  Q
    || | || ||| ||||||| ||||||||||||||||||||||||| |||||| |||  |||||||||||||    
T  6297 gttccttaacccacttaatgactgccacgtcatcaaattagcaaagtggcataggaaaggacaaaaatacc 6227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 42 - 197
Target Start/End: Original strand, 4987 - 5142
Alignment:
Q  42 caattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaactt 141  Q
    |||||||| ||  ||||||||||  ||| | || |||||||| || ||||  || ||||||| |  ||||||||||||||||||||||||||||| | ||    
T  4987 caattaggggtcgtttaaaaattgatccctatattcgctaatccttgcaaactagccttgcaattattaatcatttaaaatttcgtcctttgacctaatt 5086  T
Q  142 aatcactgccacgtcatcaaattagcaaaatggcatgggagtggacaaaaataccc 197  Q
    |||| ||||||||||||||||||||||||||| ||||| |  ||||||||||||||    
T  5087 aatcgctgccacgtcatcaaattagcaaaatgacatggaaaaggacaaaaataccc 5142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 68986 - 69105
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| || ||||||||||| |||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |   ||     
T  68986 cttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccc 69085  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  69086 acttaatcactgccacgtca 69105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 155
Target Start/End: Complemental strand, 69397 - 69255
Alignment:
Q  13 ttttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaat 112  Q
    |||||| ||||  |||| |||| | |||||||||||  ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  |||||    
T  69397 ttttggcttaaatatgtatttcatccttgcaattagatgtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaat 69298  T
Q  113 catttaaaatttcgtcctttgaccaacttaatcactgccacgt 155  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  69297 catttaaaatttcgtcctttaaccaacttaatcactgccacgt 69255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 37970 - 37851
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| ||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||| |   ||     
T  37970 cttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaatcatttaaaatttcgtccctctcccc 37871  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||||||||||||||||    
T  37870 acttaatcactgccacgtca 37851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 37602 - 37700
Alignment:
Q  55 tttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    |||||||||| ||||||||| ||||||||||| ||||  ||  |||||| |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  37602 tttaaaaattggtccttgtattcgctaattctagcaaactattcttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 37700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 1790 - 1906
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  || ||||||| |||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |   ||     
T  1790 cttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccc 1889  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  1890 acttaatcactgccacg 1906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 2148 - 2032
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| || ||| ||||||  | ||||  || ||||||| |  |||||||||||||||||||| |||||||||    
T  2148 cttgcaattaggggtcgtttaaaaattggtccctgaaattgctaatctttgcaaactatccttgcaatcattaatcatttaaaatttcgttctttgacca 2049  T
Q  138 acttaatcactgccacg 154  Q
    | |||||||||||||||    
T  2048 atttaatcactgccacg 2032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 139693 - 139809
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| ||||||||||||| |||||||||||||| || |||| |||||||||||||||||||||| |   ||     
T  139693 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccatgaattgattaatcatttaaaatttcgtccctctcccc 139792  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  139793 acttaatcactgccacg 139809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 140048 - 139929
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||| |||||||||| |||| |||| || |||||||| ||||  || ||||||| |  ||||| ||||||||||| ||||||||||||    
T  140048 cttgcaattaggggttgtttaaaaattggtccctgtattcactaattcttgcaaactagccttgcaatcattaattatttaaaatttagtcctttgacca 139949  T
Q  138 acttaatcactgccacgtca 157  Q
    ||||||| ||||||||||||    
T  139948 acttaataactgccacgtca 139929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 141594 - 141734
Alignment:
Q  17 ggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 116  Q
    |||||| |||||||||| |  ||||||||||| ||  ||||||||||| |||| |||||| |||||| |||||| |||| || |||| |  |||||| ||    
T  141594 ggtttattgatgtgtttagcccttgcaattagacggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 141693  T
Q  117 taaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    |||||||| |||||| |||||| ||||||||||||||||||    
T  141694 taaaatttagtccttggaccaaattaatcactgccacgtca 141734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 141984 - 141854
Alignment:
Q  24 tgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatt 123  Q
    |||||||||| |  ||||||||||||||  |||||||||||  ||| |||||| |||||| |||||| |||| || |||| |  ||||||||||||||||    
T  141984 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatt 141885  T
Q  124 tcgtcctttgaccaacttaatcactgccacg 154  Q
    |||||| |   || |||||||||||||||||    
T  141884 tcgtccctctccccacttaatcactgccacg 141854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 239970 - 239843
Alignment:
Q  26 atgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 125  Q
    ||||||||||| |||||| ||||| || ||||||||||| || | |||||||| |||| ||||||| |||||||| ||  ||||||||||||||||||||    
T  239970 atgtgtttcgtccttgcacttaggggtcatttaaaaattggttcctgtaatcgataatcctggcaaattacccttccaaagtttaatcatttaaaatttc 239871  T
Q  126 gtcctttgaccaacttaatcactgccac 153  Q
    |||| |  ||| ||||||| ||||||||    
T  239870 gtccctacacccacttaattactgccac 239843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 238344 - 238397
Alignment:
Q  106 gtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatc 159  Q
    |||||||| ||||||||||||||| || ||| ||||||| ||||||||||||||    
T  238344 gtttaatcttttaaaatttcgtcccttaacccacttaatgactgccacgtcatc 238397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 21012 - 21116
Alignment:
Q  20 ttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 119  Q
    ||||||||||| || || ||||||||||||||| ||||||||||| |||| |||||| |||||| || |||||||| ||||||| |  ||||||||||||    
T  21012 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaatcatttaa 21111  T
Q  120 aattt 124  Q
    |||||    
T  21112 aattt 21116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 154
Target Start/End: Complemental strand, 21368 - 21229
Alignment:
Q  15 ttggtttaatgatgtgtttcgttcttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatca 114  Q
    |||| ||||||||||| || || |||||||||||  ||  |||||||||| |||| |||||| ||||||  ||||||||||  |||||| |  |||||||    
T  21368 ttggcttaatgatgtgattagtccttgcaattagaggtcgtttaaaaattcgtccctgtaattgctaatcatggcaatttagtcttgcaattgttaatca 21269  T
Q  115 tttaaaatttcgtcctttgaccaacttaatcactgccacg 154  Q
    ||||||||| ||||| |   || |||||||||||||||||    
T  21268 tttaaaattccgtccctctccccacttaatcactgccacg 21229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 157
Target Start/End: Original strand, 14451 - 14569
Alignment:
Q  39 ttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaa 138  Q
    ||||||||||| ||  ||||||||||||||  | || |||||||| || ||||  || ||||||| |  ||||||||||||||||| ||| |||||||||    
T  14451 ttgcaattaggagtcgtttaaaaattagtctatttattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaattttgtcttttgaccaa 14550  T
Q  139 cttaatcactgccacgtca 157  Q
    |||||||||||||||||||    
T  14551 cttaatcactgccacgtca 14569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 14797 - 14737
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttaccc 98  Q
    |||||||||||| ||  |||||||||| |||  | ||||||||||| ||||||||||||||    
T  14797 cttgcaattaggggtcgtttaaaaattggtctctctaatcgctaatcctggcaatttaccc 14737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0559 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 1254 - 1370
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    ||||||||||||||  ||||||||||| |||| |||||| |||||| ||| || |||| || |||| |  |||||||||||||||||||||| |   ||     
T  1254 cttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttcgtccctctcccc 1353  T
Q  138 acttaatcactgccacg 154  Q
    |||||||||||||||||    
T  1354 acttaatcactgccacg 1370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0559; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 1590 - 1490
Alignment:
Q  58 aaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaa-tttcgtcctttgaccaacttaatcactgccacgtc 156  Q
    ||||||| || | |||||| | |||| |||||| |||| || |||| |  |||||| ||||||| ||| |||||| |||||| |||||||||||||||||    
T  1590 aaaaattcgttcctgtaattgttaatcctggcattttaaccctgcaattgttaatcgtttaaaaatttggtccttggaccaaattaatcactgccacgtc 1491  T
Q  157 a 157  Q
    |    
T  1490 a 1490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 6486 - 6387
Alignment:
Q  38 cttgcaattaggcgttatttaaaaattagtccttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacca 137  Q
    |||||||||||| ||  |||||||||| |||| |||| |||||||| || ||||  || ||||||| |  ||||||||||||||||||||||||||||||    
T  6486 cttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatcatttaaaatttcgtcctttgacca 6387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 2480 - 2435
Alignment:
Q  108 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 153  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  2480 ttaatcatttaaaatttcgccctttgaccaacttaatcactgccac 2435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 2215 - 2283
Alignment:
Q  89 caatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 157  Q
    ||||||||| ||||||| |||||||||||||||||| |||| |   || ||||||||||||||| ||||    
T  2215 caatttacctttgcattatttaatcatttaaaattttgtccctctccccacttaatcactgccatgtca 2283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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