View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0814_low_17 (Length: 430)

Name: NF0814_low_17
Description: NF0814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0814_low_17
NF0814_low_17
[»] chr3 (32 HSPs)
chr3 (30-422)||(39641701-39642096)
chr3 (95-294)||(23774150-23774348)
chr3 (123-294)||(48633875-48634046)
chr3 (95-289)||(45257147-45257341)
chr3 (117-289)||(24382842-24383014)
chr3 (95-289)||(18430198-18430392)
chr3 (100-289)||(31887384-31887573)
chr3 (122-296)||(40508865-40509039)
chr3 (95-294)||(33113108-33113306)
chr3 (93-295)||(2977254-2977456)
chr3 (95-289)||(33852597-33852791)
chr3 (93-289)||(23888697-23888893)
chr3 (201-294)||(1847645-1847738)
chr3 (101-289)||(51454179-51454371)
chr3 (175-289)||(41021010-41021124)
chr3 (144-294)||(45898324-45898474)
chr3 (201-289)||(45897053-45897141)
chr3 (215-278)||(24381758-24381821)
chr3 (201-295)||(33111838-33111932)
chr3 (202-279)||(31885531-31885608)
chr3 (201-281)||(2975471-2975551)
chr3 (201-289)||(23887201-23887289)
chr3 (157-282)||(2226161-2226286)
chr3 (201-289)||(45255486-45255574)
chr3 (215-284)||(18428757-18428826)
chr3 (169-282)||(51684620-51684733)
chr3 (169-282)||(53190780-53190893)
chr3 (201-289)||(40508496-40508584)
chr3 (201-289)||(48635373-48635461)
chr3 (115-229)||(42279570-42279684)
chr3 (122-224)||(43765205-43765307)
chr3 (169-282)||(54898447-54898560)
[»] chr2 (25 HSPs)
chr2 (93-289)||(25619663-25619859)
chr2 (95-289)||(37417276-37417470)
chr2 (95-289)||(29909587-29909781)
chr2 (100-289)||(15432331-15432520)
chr2 (100-289)||(42001613-42001801)
chr2 (100-288)||(42879360-42879547)
chr2 (95-289)||(39324-39518)
chr2 (95-289)||(92274-92467)
chr2 (175-289)||(15372502-15372616)
chr2 (152-288)||(39560-39696)
chr2 (201-289)||(28248175-28248263)
chr2 (203-289)||(41144-41230)
chr2 (175-289)||(41706542-41706656)
chr2 (201-289)||(11021536-11021624)
chr2 (201-295)||(15373888-15373982)
chr2 (215-289)||(42880825-42880899)
chr2 (169-282)||(16763086-16763199)
chr2 (244-289)||(28246666-28246711)
chr2 (201-289)||(33196-33284)
chr2 (169-289)||(11315336-11315456)
chr2 (201-289)||(37418769-37418857)
chr2 (201-269)||(41708430-41708498)
chr2 (169-282)||(14389105-14389218)
chr2 (169-282)||(39664769-39664882)
chr2 (169-229)||(42519226-42519286)
[»] chr7 (30 HSPs)
chr7 (100-289)||(33038729-33038918)
chr7 (95-289)||(46812509-46812703)
chr7 (93-289)||(40784349-40784545)
chr7 (152-295)||(47341670-47341813)
chr7 (95-289)||(23953808-23954002)
chr7 (95-289)||(46996629-46996823)
chr7 (115-289)||(27955373-27955547)
chr7 (110-289)||(2167482-2167661)
chr7 (141-289)||(38614885-38615032)
chr7 (146-289)||(38613459-38613602)
chr7 (201-289)||(40785548-40785636)
chr7 (100-287)||(2492332-2492518)
chr7 (175-289)||(8423288-8423402)
chr7 (175-289)||(35344297-35344411)
chr7 (201-289)||(30108568-30108656)
chr7 (201-289)||(45465184-45465272)
chr7 (201-289)||(2168834-2168922)
chr7 (213-289)||(38614804-38614880)
chr7 (201-295)||(4321035-4321129)
chr7 (231-284)||(33037701-33037754)
chr7 (201-289)||(8421419-8421507)
chr7 (201-289)||(35342428-35342516)
chr7 (201-289)||(46810708-46810796)
chr7 (201-289)||(46994663-46994751)
chr7 (215-284)||(47339784-47339853)
chr7 (201-289)||(3690153-3690241)
chr7 (203-282)||(33775418-33775497)
chr7 (201-284)||(36762680-36762763)
chr7 (244-294)||(45463668-45463718)
chr7 (244-289)||(30109742-30109787)
[»] chr8 (28 HSPs)
chr8 (95-295)||(42897701-42897901)
chr8 (103-287)||(33160083-33160267)
chr8 (95-289)||(37525950-37526144)
chr8 (100-289)||(462302-462491)
chr8 (95-289)||(32822364-32822557)
chr8 (120-289)||(38882749-38882918)
chr8 (100-255)||(33750316-33750471)
chr8 (95-289)||(1320620-1320814)
chr8 (120-289)||(31821421-31821590)
chr8 (93-289)||(8654503-8654698)
chr8 (175-289)||(31201150-31201264)
chr8 (201-289)||(40019159-40019247)
chr8 (201-284)||(461184-461267)
chr8 (95-289)||(9184386-9184580)
chr8 (197-289)||(25373618-25373710)
chr8 (201-289)||(33368762-33368850)
chr8 (201-289)||(33748335-33748423)
chr8 (201-289)||(25707301-25707389)
chr8 (201-284)||(31823476-31823559)
chr8 (231-277)||(37524873-37524919)
chr8 (231-289)||(38881431-38881489)
chr8 (201-284)||(42894784-42894867)
chr8 (169-282)||(8609808-8609921)
chr8 (169-282)||(13282488-13282601)
chr8 (201-277)||(24526911-24526987)
chr8 (201-289)||(31199488-31199576)
chr8 (201-269)||(32824271-32824339)
chr8 (201-293)||(33158655-33158747)
[»] chr1 (25 HSPs)
chr1 (93-289)||(42134485-42134681)
chr1 (110-289)||(18183886-18184064)
chr1 (95-294)||(46638734-46638933)
chr1 (95-289)||(33685176-33685369)
chr1 (95-289)||(36895437-36895631)
chr1 (95-289)||(44157436-44157630)
chr1 (95-276)||(45380911-45381092)
chr1 (95-289)||(35479903-35480096)
chr1 (100-283)||(31801642-31801825)
chr1 (175-295)||(47269463-47269583)
chr1 (175-289)||(27940611-27940725)
chr1 (233-289)||(5783367-5783423)
chr1 (203-289)||(35478090-35478176)
chr1 (201-274)||(18180518-18180591)
chr1 (201-289)||(5784867-5784955)
chr1 (201-289)||(11152548-11152636)
chr1 (201-289)||(31803700-31803788)
chr1 (201-289)||(33679262-33679350)
chr1 (201-284)||(27952500-27952583)
chr1 (95-223)||(6575261-6575387)
chr1 (169-282)||(34778139-34778252)
chr1 (201-289)||(44159294-44159382)
chr1 (201-289)||(45379088-45379176)
chr1 (169-282)||(4855967-4856080)
chr1 (231-284)||(36894830-36894883)
[»] chr4 (30 HSPs)
chr4 (93-294)||(51041856-51042056)
chr4 (95-289)||(44558420-44558614)
chr4 (95-282)||(27624816-27625003)
chr4 (110-294)||(4519374-4519558)
chr4 (95-289)||(35996066-35996260)
chr4 (95-289)||(47941814-47942008)
chr4 (95-289)||(2827410-2827601)
chr4 (95-289)||(2350431-2350628)
chr4 (175-289)||(10372713-10372827)
chr4 (175-289)||(10762584-10762698)
chr4 (175-289)||(44794767-44794881)
chr4 (201-289)||(4520451-4520539)
chr4 (201-289)||(39923007-39923095)
chr4 (201-294)||(44992806-44992899)
chr4 (201-289)||(42879278-42879366)
chr4 (201-289)||(43778392-43778480)
chr4 (241-289)||(5486092-5486140)
chr4 (201-289)||(39085152-39085240)
chr4 (201-284)||(44792942-44793025)
chr4 (244-289)||(5484543-5484588)
chr4 (201-270)||(51040757-51040826)
chr4 (201-289)||(2828411-2828499)
chr4 (201-289)||(35997767-35997855)
chr4 (201-283)||(44556629-44556711)
chr4 (244-289)||(39083642-39083687)
chr4 (244-289)||(39189385-39189430)
chr4 (244-289)||(39921497-39921542)
chr4 (169-282)||(41761747-41761860)
chr4 (201-289)||(10371060-10371148)
chr4 (102-282)||(48813797-48813977)
[»] chr5 (21 HSPs)
chr5 (95-289)||(43317987-43318181)
chr5 (115-289)||(38178040-38178214)
chr5 (115-289)||(38205264-38205438)
chr5 (95-289)||(18728529-18728723)
chr5 (93-289)||(35395336-35395530)
chr5 (100-289)||(35292314-35292502)
chr5 (95-294)||(32087512-32087711)
chr5 (95-289)||(33256403-33256597)
chr5 (180-289)||(38596871-38596980)
chr5 (100-224)||(38597013-38597137)
chr5 (201-294)||(32089925-32090018)
chr5 (201-295)||(40330515-40330609)
chr5 (201-284)||(33257760-33257843)
chr5 (201-295)||(35291045-35291139)
chr5 (169-282)||(17574328-17574441)
chr5 (201-294)||(18726563-18726656)
chr5 (115-170)||(32838447-32838502)
chr5 (121-274)||(24496761-24496914)
chr5 (169-282)||(36057614-36057727)
chr5 (201-277)||(38176647-38176723)
chr5 (201-277)||(38203871-38203947)
[»] chr6 (11 HSPs)
chr6 (93-277)||(3018357-3018541)
chr6 (95-289)||(29077331-29077525)
chr6 (175-289)||(4641358-4641472)
chr6 (175-289)||(29112303-29112417)
chr6 (201-295)||(35174388-35174482)
chr6 (201-289)||(17950564-17950652)
chr6 (179-289)||(2968142-2968252)
chr6 (215-289)||(30639614-30639688)
chr6 (239-289)||(35175934-35175984)
chr6 (248-289)||(3018543-3018584)
chr6 (244-289)||(17952118-17952163)
[»] scaffold0477 (1 HSPs)
scaffold0477 (175-289)||(6641-6755)
[»] scaffold1041 (1 HSPs)
scaffold1041 (197-269)||(2121-2193)


Alignment Details
Target: chr3 (Bit Score: 250; Significance: 1e-139; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 30 - 422
Target Start/End: Original strand, 39641701 - 39642096
Alignment:
Q  30 tggagttcatttggtctcctttcttttattcagaatgttacattaatccacaaaattacattaatgtggattccttcttaccacatgtataagacaacac 129  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||    
T  39641701 tggagttcatttggtctcctttcttttattcagaatgttgcattaatccacaaaatgacattaatgtgacttccttcttaccacatgtataagacaacac 39641800  T
Q  130 aacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttg 229  Q
    |||||| ||||||  ||||||||||||||||| ||||||||| | |||||||||||||| |||||| ||||||||||| | | ||||| |||||||||||    
T  39641801 aacatgcaggacggtagatcaacatggctaacggagtacttgaacggagggaccttttttatgaacgtctgacaaatttaaggactaagttgatactttg 39641900  T
Q  230 aataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattcaaagatttacagtgaactatatttcat--cnnnnnnn 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| ||||||| ||| |||||||              
T  39641901 aataattgagagatgaatttggccgacccgtaaaaattcaaggacaaatttgatggttcactcaaaaattcacagtgagctacatttcataaaaaaaaaa 39642000  T
Q  328 nngctattcatactcatgttaactttacaaagagatgaaatttatatccaagttgatcctcaagcttagatctcctt-caccttagtacctatgct 422  Q
      |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  39642001 tagctattcatactcatgttaactttacaaagagatgaaaattatatccaagttgatcctcaagcttagatctccttccaccttagtacgtatgct 39642096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 95 - 294
Target Start/End: Complemental strand, 23774348 - 23774150
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| |||||| || |||| |||| ||||||||||| |||| ||| ||||||||||||||||||||||||| |||| || | |||||| ||||||||| |    
T  23774348 gtggcttccttattgccacgtgtacaagacaacacatcatgcagggcgacagatcaacatggctaacagagcacttagacg-agggacttttttgatgga 23774250  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattcaa 294  Q
    | ||||||||||||||| |||||||||||| || | ||||||||| || ||||||||||||| ||| |||||||||||||||||||||||||||| ||||    
T  23774249 cgtctgacaaattcagggactaaattgatatttcgcataattgagggacgaatttggccgactcgtgaaaattcaaggacgaatttgatggttcactcaa 23774150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 123 - 294
Target Start/End: Complemental strand, 48634046 - 48633875
Alignment:
Q  123 acaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattga 222  Q
    |||||||| |||| ||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||| || ||||||||||||||| ||||| ||||    
T  48634046 acaacacatcatgcagggcgacagatcaacatggctaacggagcacttggacggagggacctttttgatggacgtctgacaaattcagggactaagttga 48633947  T
Q  223 tactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattcaa 294  Q
    || || | ||||||||  || ||||||| ||||||||| |||||||||||||||||||||||||||| ||||    
T  48633946 tatttcgcataattgatggacgaatttgaccgacccgtgaaaattcaaggacgaatttgatggttcactcaa 48633875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 95 - 289
Target Start/End: Original strand, 45257147 - 45257341
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||| ||||| |||| |||| |||||||||||||||| ||| || ||  ||| |||| ||||| ||| ||||||| |||||||| ||||| ||| |    
T  45257147 gtggcttcattcttgccacgtgtacaagacaacacaacatgcagggcggcatgtcagcatgactaacggagcacttggacggagggacattttttatgga 45257246  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | ||||||||||||||||||||| |||||| |||  ||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||    
T  45257247 cgtctgacaaattcaggaactaagttgatattttacataattgagggatgaatttggccgacccgtgaaaattcaagaacgaatttgatggttca 45257341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 117 - 289
Target Start/End: Original strand, 24382842 - 24383014
Alignment:
Q  117 tataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatctgacaaattcaggaacta 216  Q
    ||||||||||||||||||| ||| ||||| |||| |||||||||| ||  ||||||| |||||||||||||||||| || |||||||||| || | ||||    
T  24382842 tataagacaacacaacatgcagggcgacatatcagcatggctaacggatgacttggacggagggacctttttgatggacgtctgacaaatccatggacta 24382941  T
Q  217 aattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | |||||| ||   ||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24382942 agttgatatttctcataattgaaggatgaatttggccgacccgtaaaaattcaaggaccaatttgatggttca 24383014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 95 - 289
Target Start/End: Original strand, 18430198 - 18430392
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| |||| |||| ||||||||||  |||| ||| |||||  ||| |||||||||| ||| ||||||| ||||||||||||||  || |    
T  18430198 gtggtttccttcttgccacgtgtacaagacaacacggcatgcagggcgacatgtcaccatggctaacggagcacttggacggagggacctttttattgga 18430297  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | ||||||| ||||||| ||||| |||||| || | ||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  18430298 cgtctgacatattcagggactaagttgatatttcgcataattgagggatgaatttggctgacccgttaaaattcaaggacgaatttgatggttca 18430392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 100 - 289
Target Start/End: Original strand, 31887384 - 31887573
Alignment:
Q  100 ttccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatct 199  Q
    |||||| || |||| |||| ||||||||||| |||| | | ||||| |||| |||||||||| ||| ||||||| |||||||||||||||||  ||||||    
T  31887384 ttcctttttgccacgtgtacaagacaacacagcatgcaaggcgacaaatcagcatggctaacggagcacttggacggagggacctttttgatagacatct 31887483  T
Q  200 gacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    |||||||||||| ||||| |||||| || | ||||||||  | |||||||| |||| |||| ||||||||||||||||||||||||||||    
T  31887484 gacaaattcagggactaagttgatatttcgcataattgatggttgaatttgaccgatccgtgaaaattcaaggacgaatttgatggttca 31887573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 122 - 296
Target Start/End: Original strand, 40508865 - 40509039
Alignment:
Q  122 gacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattg 221  Q
    |||||||||||||| ||| |||||||||| || | ||||| ||  ||||||| |||||||| ||||||||| || ||||||||||||| | | ||| |||    
T  40508865 gacaacacaacatgcagggcgacagatcagcacgactaacggaacacttggacggagggacatttttgatggacgtctgacaaattcaaggattaagttg 40508964  T
Q  222 atactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattcaaag 296  Q
    ||| || | ||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  40508965 atatttcgcataattgagggacgaatttggccgacccgtgaaaattcaaggacgaatttgatggttcactcaaag 40509039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 95 - 294
Target Start/End: Original strand, 33113108 - 33113306
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| |||||| || |||| |||| |||||| | |||||||  || |||||||||  |||||||||| ||  ||||| | |||||||||||||||||| |    
T  33113108 gtggcttcctttttgccacgtgtacaagacagcgcaacatgctgggcgacagatcggcatggctaacggatcacttg-acggagggacctttttgatgga 33113206  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattcaa 294  Q
    | ||||||||||| ||| ||||| |||||| || | ||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||| ||||    
T  33113207 cgtctgacaaatttagggactaagttgatatttcgcataattgagggatgattttggccgacccgtaaaaattcaaggactaatttgatggttcactcaa 33113306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 93 - 295
Target Start/End: Original strand, 2977254 - 2977456
Alignment:
Q  93 atgtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatg 192  Q
    |||||| ||||||||| |||| ||||| |||||||| | |||| ||| ||||| |||| ||| |||||| ||| ||||||  ||| ||||||||||||||    
T  2977254 atgtggtttccttcttgccacgtgtattagacaacatagcatgcagggcgacaaatcagcatcgctaacggagcacttgggcggatggacctttttgatg 2977353  T
Q  193 aacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattc 292  Q
     || | ||||||||| ||| ||| |||||||| || | |||||| || |||||||||||||||  ||||||||||||||||||||||||||| |||| ||    
T  2977354 gacgtatgacaaatttagggactgaattgatatttcgcataattaagggatgaatttggccgattcgtaaaaattcaaggacgaatttgatgattcactc 2977453  T
Q  293 aaa 295  Q
    |||    
T  2977454 aaa 2977456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 95 - 289
Target Start/End: Original strand, 33852597 - 33852791
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| |||| | || |||||||||||||||| ||| |||||  ||| |||||||||| ||| |||||||  ||||||||||||||||| |    
T  33852597 gtggcttccttcttgccacgtctacaagacaacacaacatgcagggcgacatgtcaccatggctaacggagcacttggacagagggacctttttgatgga 33852696  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | ||||| |||||||| || |||||||||| || | ||||||||| ||| |||||| || |||||||||||||||||||| ||||| ||| ||||    
T  33852697 cgtctgataaattcagaaattaaattgatatttcgcataattgagggataaatttgaccaacccgtaaaaattcaaggacaaatttaatgattca 33852791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 93 - 289
Target Start/End: Original strand, 23888697 - 23888893
Alignment:
Q  93 atgtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatg 192  Q
    |||||| ||||||||| ||||  ||| |||||||||||  ||| | | |||||||||| || ||||||| ||| | ||||| ||||||||||||||||||    
T  23888697 atgtggcttccttcttgccacgcgtacaagacaacacagtatgcaaggcgacagatcagcaaggctaacggaggatttggacggagggacctttttgatg 23888796  T
Q  193 aacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
     || | ||||||||||||| |||||  ||||| || | ||||||||| || ||| |||||||||  || |||||||| |||||||||||||||||||    
T  23888797 gacgtttgacaaattcagggactaagctgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttca 23888893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 201 - 294
Target Start/End: Original strand, 1847645 - 1847738
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattcaa 294  Q
    ||||||||||| | |||||||||| |||| ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||| |||| ||||    
T  1847645 acaaattcagggattaaattgatattttgcataattgagggatgaatttggccgacccgtgaaaattcaaggacaaatttgatgattcactcaa 1847738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 101 - 289
Target Start/End: Original strand, 51454179 - 51454371
Alignment:
Q  101 tccttcttaccacatgtataagacaacacaacatgtaggacgacagatc----aacatggctaacagagtacttggatggagggacctttttgatgaaca 196  Q
    |||||||| |||| |||||||||||||||| |||| |||  |||| ||     |||||||||||| ||  |||||||  ||||||| ||||| ||| |      
T  51454179 tccttcttgccacgtgtataagacaacacatcatgcagggggacatatatatgaacatggctaacggatcacttggacagagggacattttttatggatg 51454278  T
Q  197 tctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | |||||||||||   ||||| |||||| || | |||||||||  |||||||||||||| |||| ||||||||||||||||||||||||||||    
T  51454279 tttgacaaattcaaagactaatttgatatttcgcataattgaggaatgaatttggccgatccgtgaaaattcaaggacgaatttgatggttca 51454371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 289
Target Start/End: Original strand, 41021010 - 41021124
Alignment:
Q  175 ggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggac 274  Q
    |||||||||||||||||| || ||||||||||||||| |  ||||||| | || | ||||||||| ||  |||||||||||| ||| |||||||| ||||    
T  41021010 ggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcagggac 41021109  T
Q  275 gaatttgatggttca 289  Q
    |||||||||||||||    
T  41021110 gaatttgatggttca 41021124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 144 - 294
Target Start/End: Original strand, 45898324 - 45898474
Alignment:
Q  144 cagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagat 243  Q
    ||||||| || ||||||| ||| ||||||| |||||||||||||||||  || ||||||||||||| | ||||| |||||| || | |||||| || ||     
T  45898324 cagatcagcaaggctaacggaggacttggacggagggacctttttgatagacgtctgacaaattcaaggactaagttgatatttcgcataattcagggac 45898423  T
Q  244 gaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattcaa 294  Q
     || |||| ||||  || |||||||| ||||||||||||||||||| ||||    
T  45898424 aaagttggtcgacgtgtgaaaattcagggacgaatttgatggttcactcaa 45898474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 45897141 - 45897053
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | |||||||||| || | ||||||||| || ||| |||||||||||||||||||||||||||||| |||||| ||||    
T  45897141 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcaaggacgaagttgatgattca 45897053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 24381821 - 24381758
Alignment:
Q  215 taaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaat 278  Q
    |||||||||| || | ||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  24381821 taaattgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaat 24381758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 201 - 295
Target Start/End: Complemental strand, 33111932 - 33111838
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattcaaa 295  Q
    ||||||||||| | |||||||||| || | ||||||||| |||||||||| |||| |||| |||||||| ||||||| |||||| |||| |||||    
T  33111932 acaaattcagggattaaattgatatttcgcataattgagggatgaatttgaccgagccgtgaaaattcagggacgaagttgatgattcactcaaa 33111838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 31885608 - 31885531
Alignment:
Q  202 caaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatt 279  Q
    |||||||| | |||||||||||| || | |||||| || |||||||||| ||||||||||||||| ||||||||||||    
T  31885608 caaattcaagtactaaattgatatttcgcataattaagggatgaatttgaccgacccgtaaaaatccaaggacgaatt 31885531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 2975551 - 2975471
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttg 281  Q
    ||||||||||| | |||||||||| || | || |||||| ||||||||| || || |||||||||||||||||||||||||    
T  2975551 acaaattcagggattaaattgatatttcgcatcattgagggatgaatttagctgatccgtaaaaattcaaggacgaatttg 2975471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 23887289 - 23887201
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | |||||||||| || | ||||||||| || ||| || |||||||| |||||||||||||||||| |||||| ||||    
T  23887289 acaaattcagggattaaattgatatttcgcataattgagggacgaagttagccgacccataaaaattcaaggacgaagttgatgattca 23887201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 157 - 282
Target Start/End: Original strand, 2226161 - 2226286
Alignment:
Q  157 ctaacagagtacttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgac 256  Q
    ||||||||||  ||||| ||||||| | ||||||||||| ||||  ||||||||| ||||||| |||| || | | |||| || || ||||||||||||     
T  2226161 ctaacagagtttttggacggagggaacattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgat 2226260  T
Q  257 ccgtaaaaattcaaggacgaatttga 282  Q
       | |||||||||||||||||||||    
T  2226261 tttttaaaattcaaggacgaatttga 2226286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 45255574 - 45255486
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | |||| | ||| |||| ||||||||| |||||| ||| |||| ||||||||||||| ||||||| |||||| ||||    
T  45255574 acaaattcagggattaaagtaatattttgcataattgagtgatgaagttgaccgatccgtaaaaattcagggacgaagttgatgattca 45255486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 18428826 - 18428757
Alignment:
Q  215 taaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatg 284  Q
    |||||||||| || | ||||||||| || ||| ||| |||||||||||||||||| ||||||| ||||||    
T  18428826 taaattgatatttcgcataattgagggacgaagttgaccgacccgtaaaaattcagggacgaagttgatg 18428757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 282
Target Start/End: Complemental strand, 51684733 - 51684620
Alignment:
Q  169 ttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattc 268  Q
    ||||| ||||||||| |||||||| || ||||  ||||||| | ||||||| |||| |||| | |||| || |||||||||||| ||    | |||||||    
T  51684733 ttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatattttgcaaaattcagggatgaatttggctgatttttgaaaattc 51684634  T
Q  269 aaggacgaatttga 282  Q
    ||||||||||||||    
T  51684633 aaggacgaatttga 51684620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 282
Target Start/End: Original strand, 53190780 - 53190893
Alignment:
Q  169 ttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattc 268  Q
    ||||| ||||||||| |||||||| || ||||  ||||||||| ||||||| |||| || | | |||| || || ||||||||||||    | |||||||    
T  53190780 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattc 53190879  T
Q  269 aaggacgaatttga 282  Q
    ||||||||||||||    
T  53190880 aaggacgaatttga 53190893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 40508584 - 40508496
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | |||||||| | || | |||||| || || ||||||| ||||||||| |||||||| ||||||| |||||| ||||    
T  40508584 acaaattcagggattaaattgagatttcgcataattaagggacgaatttgtccgacccgtgaaaattcagggacgaagttgatgattca 40508496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 48635373 - 48635461
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | |||||||||| || | |||||| || || ||||||| |||| |||| |||||||| ||||||| |||||| ||||    
T  48635373 acaaattcagggattaaattgatatttcgcataattaagggacgaatttgaccgatccgtgaaaattcagggacgaaattgatgattca 48635461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 42279684 - 42279570
Alignment:
Q  115 tgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatctgacaaattcaggaac 214  Q
    ||||||||||||||||||||| | || |||| |||| ||   |||||||||   ||||| ||||||||| |||||||  || ||||  ||||||||| ||    
T  42279684 tgtataagacaacacaacatgcaagaggacacatcatcaccactaacagagcttttggacggagggaccattttgatagacgtctgtaaaattcagggac 42279585  T
Q  215 taaattgatactttg 229  Q
    ||||| |||| ||||    
T  42279584 taaatagatattttg 42279570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 43765307 - 43765205
Alignment:
Q  122 gacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattg 221  Q
    |||||||||||||||| || |||| |||| ||   ||||| |||   ||||||||||||||| |||||||| || ||||  |||||||| |||||||| |    
T  43765307 gacaacacaacatgtaagaggacacatcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagaaactaaatag 43765208  T
Q  222 ata 224  Q
    |||    
T  43765207 ata 43765205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 282
Target Start/End: Complemental strand, 54898560 - 54898447
Alignment:
Q  169 ttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattc 268  Q
    ||||| |||| |||| ||||||||||| ||||  ||||||||| ||||||| |||| || | | |||| || || ||||||| ||||    | |||||||    
T  54898560 ttggacggagagaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattc 54898461  T
Q  269 aaggacgaatttga 282  Q
    ||||||||||||||    
T  54898460 aaggacgaatttga 54898447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 7e-62; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 93 - 289
Target Start/End: Complemental strand, 25619859 - 25619663
Alignment:
Q  93 atgtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatg 192  Q
    |||||| ||| ||||| |||| ||||||||||||| ||||||| ||  ||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  25619859 atgtggcttctttcttgccacgtgtataagacaacgcaacatgcagagcgacagatcaacatggctaacggagcacttggatggagggacctttttgatg 25619760  T
Q  193 aacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
     |||| ||||||||||||| ||||| |||||| |||| ||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  25619759 gacatatgacaaattcagggactaagttgatattttgcataattgagggatgaatttgaccgacccataaaaattcaaggacgaatttgatggttca 25619663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 95 - 289
Target Start/End: Complemental strand, 37417470 - 37417276
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| |||| |||| ||||||||||| |||| ||| | |||||||| |||||||||| ||| ||||||| | |||||||||||||||| |    
T  37417470 gtggcttccttcttgccacgtgtacaagacaacacagcatgcagggcaacagatcagcatggctaacggagcacttggacgaagggacctttttgatgga 37417371  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | ||||||||||||||| ||||| |||||| || | ||||||||| |||||||||||||||||| | ||||||||||||||||| ||||||||||    
T  37417370 cgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccatgaaaattcaaggacgaatatgatggttca 37417276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 95 - 289
Target Start/End: Original strand, 29909587 - 29909781
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| ||||  ||| |||||||||||||||| |   ||||||||||||||||||||||||| ||||||| |||||||||||||||||| |    
T  29909587 gtggcttccttcttgccacgcgtacaagacaacacaacatgcaacgcgacagatcaacatggctaacagagcacttggacggagggacctttttgatgga 29909686  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | ||||||||||| ||| |||||||||||| || | ||||||||| ||  || ||||||||| ||| |||||||| |||| ||||||||||||||    
T  29909687 cgtctgacaaattaagggactaaattgatatttcgcataattgagggacaaagttggccgacgcgtgaaaattcagggacaaatttgatggttca 29909781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 100 - 289
Target Start/End: Complemental strand, 15432520 - 15432331
Alignment:
Q  100 ttccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatct 199  Q
    ||||||||| |||| |||| |||||||||||||||| ||| |||||  ||| |||| |||| |||| ||||||| | | | |||||||||||| || |||    
T  15432520 ttccttcttgccacgtgtacaagacaacacaacatgcagggcgacatgtcagcatgactaatagagcacttggacgaatgaacctttttgatggacgtct 15432421  T
Q  200 gacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    |||||||||||  |||||||||||| || | ||||||||| |||||||||| ||||||| ||||||||||||||  ||||||||||||||    
T  15432420 gacaaattcagagactaaattgatatttcgcataattgagggatgaatttgaccgacccataaaaattcaaggataaatttgatggttca 15432331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 100 - 289
Target Start/End: Complemental strand, 42001801 - 42001613
Alignment:
Q  100 ttccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatct 199  Q
    |||||||||  ||| |||| |||||||| ||||||| ||| ||||| |||||||||||||||  || ||||||||||| | |||||||||||||   |||    
T  42001801 ttccttcttgtcacgtgtacaagacaactcaacatgcagggcgacacatcaacatggctaacgaagcacttggatggatgaacctttttgatgatg-tct 42001703  T
Q  200 gacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    |||||||||| | | |||||||||| || | ||||| ||| ||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  42001702 gacaaattcaaggattaaattgatatttcgcataatagagggataaatttggacaacccgtaaaaattcaaggacgaatttgatggttca 42001613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 100 - 288
Target Start/End: Complemental strand, 42879547 - 42879360
Alignment:
Q  100 ttccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatct 199  Q
    |||||||||  ||| |||| ||||||||||| |||| ||| ||||| |||| |||| ||||| ||  ||||||| |||||||||||||||||| || |||    
T  42879547 ttccttcttgtcacgtgtacaagacaacacagcatgcagggcgacatatcagcatgactaacggaacacttggacggagggacctttttgatggacgtct 42879448  T
Q  200 gacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttc 288  Q
    ||||||||||   ||||| |||||  || | |||||| || |||||||||| |||||||||||||||| ||||||||||||||||||||    
T  42879447 gacaaattcatagactaagttgat-tttcgcataattaagggatgaatttgaccgacccgtaaaaatttaaggacgaatttgatggttc 42879360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 95 - 289
Target Start/End: Original strand, 39324 - 39518
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| ||||  ||| ||||||||||| |||| | ||||||| |||| |||||||||| ||  ||||||| || |||||||||||||||||    
T  39324 gtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacatatcagcatggctaacggaacacttggacggggggacctttttgatgaa 39423  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | ||||||||||||||| ||||| |||||| || | |||||||||  |  || ||||| ||| ||| |||||||  |||| ||||||||||||||    
T  39424 cgtctgacaaattcagggactaagttgatatttcgcataattgaggtacaaagttggctgacgcgtgaaaattcggggacaaatttgatggttca 39518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 95 - 289
Target Start/End: Original strand, 92274 - 92467
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| ||||| ||| ||||||||||| |||| | ||||||| |||| |||||||||| ||| |||||||  |||||||||||||||||||    
T  92274 gtggcttccttcttgccacacgtacaagacaacacagcatgcaagacgacatatcagcatggctaacggagcacttggactgagggacctttttgatgaa 92373  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | |||||||||||||   ||||| |||||| || | |||||||||  | ||| ||| | ||  ||| |||||||| |||| ||||||||||||||    
T  92374 cgtctgacaaattcaaagactaagttgatatttcgcataattgaggtacgaagttgactgatgcgtgaaaattcagggac-aatttgatggttca 92467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 175 - 289
Target Start/End: Complemental strand, 15372616 - 15372502
Alignment:
Q  175 ggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggac 274  Q
    |||||||||||||||||| || ||||| ||||||||| | |||||||||| |||| ||||||||| |  ||||||||||||||||| |||||||| ||||    
T  15372616 ggagggacctttttgatggacgtctgataaattcagggattaaattgatattttgcataattgaggggcgaatttggccgacccgtgaaaattcagggac 15372517  T
Q  275 gaatttgatggttca 289  Q
     || |||||||||||    
T  15372516 taaattgatggttca 15372502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 152 - 288
Target Start/End: Complemental strand, 39696 - 39560
Alignment:
Q  152 catggctaacagagtacttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttgg 251  Q
    ||||||||||  || ||||||| |||||||||||||| ||  ||  |||| ||||||||| | |||||||||| || | ||||||||| || ||||||||    
T  39696 catggctaacgaagcacttggacggagggacctttttaatcgacgcctgataaattcagggattaaattgatatttcgcataattgagggacgaatttgg 39597  T
Q  252 ccgacccgtaaaaattcaaggacgaatttgatggttc 288  Q
    |||||||||||||||||| |||| || ||||||||||    
T  39596 ccgacccgtaaaaattcagggactaaattgatggttc 39560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 28248175 - 28248263
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | |||||||||| || | ||||||||| || ||| |||||||||||||||||||||| ||||||| |||||| ||||    
T  28248175 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgattca 28248263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 203 - 289
Target Start/End: Original strand, 41144 - 41230
Alignment:
Q  203 aaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||| | |||||||||| || | ||||||||| || ||||||||||||||||| |||||||| ||||||| |||||| ||||    
T  41144 aaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgaaaattcagggacgaagttgatgattca 41230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 175 - 289
Target Start/End: Complemental strand, 41706656 - 41706542
Alignment:
Q  175 ggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggac 274  Q
    |||||||||||||||||| || |  || ||||||||| | |||||||||| || | ||||||||| || ||||||| ||||||||| |||||||| | ||    
T  41706656 ggagggacctttttgatggacgttcgataaattcagggattaaattgatatttcgcataattgagggacgaatttgaccgacccgtgaaaattcaggaac 41706557  T
Q  275 gaatttgatggttca 289  Q
     || |||||||||||    
T  41706556 taaattgatggttca 41706542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 11021624 - 11021536
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | |||||||||| || | ||||||||| || ||| ||||||||||||| |||||||| ||||||| |||||| ||||    
T  11021624 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattca 11021536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 295
Target Start/End: Original strand, 15373888 - 15373982
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattcaaa 295  Q
    ||||||||||||| |||||||||| || | |||||||||  | |||||||||||||| || | |||||| |||| || |||||| |||| |||||    
T  15373888 acaaattcaggaattaaattgatatttcgcataattgaggaacgaatttggccgacctgtgataattcagggactaagttgatgattcactcaaa 15373982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 42880825 - 42880899
Alignment:
Q  215 taaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    |||||||||| || | |||||| || || ||||||| |||||||||||||||||| ||||||| |||||| ||||    
T  42880825 taaattgatatttcgcataattaagggacgaatttgaccgacccgtaaaaattcagggacgaagttgatgattca 42880899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 282
Target Start/End: Complemental strand, 16763199 - 16763086
Alignment:
Q  169 ttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattc 268  Q
    ||||| ||||||||| |||||||| || ||||  ||||||||| ||||||| |||| || | | |||| || || ||||||| ||||    |||||||||    
T  16763199 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttaaaaattc 16763100  T
Q  269 aaggacgaatttga 282  Q
    ||||||||||||||    
T  16763099 aaggacgaatttga 16763086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 28246711 - 28246666
Alignment:
Q  244 gaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||    
T  28246711 gaatttggccgacccctaaaaattcagggacgaaattgatggttca 28246666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 33284 - 33196
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | |||||||||| ||   ||||||||  || ||| ||||||||||||| |||||||| ||||||| |||||| ||||    
T  33284 acaaattcagggattaaattgatatttcacataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattca 33196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 11315336 - 11315456
Alignment:
Q  169 ttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattc 268  Q
    ||||| ||||||||| |||||||| || ||||||||||||||||||||  |||||| || |   ||||  |  | ||||||||||||  | ||||||||     
T  11315336 ttggacggagggaccattttgatggacgtctgacaaattcaggaactattttgatatttcgttaaattagggaacgaatttggccgattcataaaaattt 11315435  T
Q  269 aaggacgaatttgatggttca 289  Q
    ||||||||| |||||| ||||    
T  11315436 aaggacgaagttgatgattca 11315456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 37418769 - 37418857
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||| ||| | || ||||||| |||| |||||| |  || ||||||||||||||||| |||||||||| ||||| |||||| ||||    
T  37418769 acaaatttagggattagattgatattttgcataattaaaggacgaatttggccgacccgtgaaaattcaagtacgaagttgatgattca 37418857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 41708430 - 41708498
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattca 269  Q
    ||||||||||| | |||||||||| || | ||||||||| || ||||||||||||||||| | ||||||    
T  41708430 acaaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgataattca 41708498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 282
Target Start/End: Original strand, 14389105 - 14389218
Alignment:
Q  169 ttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattc 268  Q
    ||||| ||||||||| |||||||| |||| ||  ||||||||| ||||||| |||| || | | |||| || || ||||||||||||    | |||||||    
T  14389105 ttggacggagggaccattttgatggacatttggaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattc 14389204  T
Q  269 aaggacgaatttga 282  Q
    || |||||||||||    
T  14389205 aatgacgaatttga 14389218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 282
Target Start/End: Original strand, 39664769 - 39664882
Alignment:
Q  169 ttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattc 268  Q
    ||||| ||||||||| |||||||| || ||||  ||||||||| ||||||| |||| || | | ||||  | || ||||||||||||    | |||||||    
T  39664769 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgtaaaattcggggacgaatttggccgattttttaaaattc 39664868  T
Q  269 aaggacgaatttga 282  Q
    ||||||||||||||    
T  39664869 aaggacgaatttga 39664882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 42519226 - 42519286
Alignment:
Q  169 ttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttg 229  Q
    ||||||||||||||| |||||||| || ||||  ||||||||| ||||||| |||| ||||    
T  42519226 ttggatggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 42519286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 1e-57; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 100 - 289
Target Start/End: Original strand, 33038729 - 33038918
Alignment:
Q  100 ttccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatct 199  Q
    |||||||||  ||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||| || |||    
T  33038729 ttccttcttgacacgtgtataagacaacacaacatgcaggacgacagatcaacatgcctaacagagcacttggacggagggacctttttgatggacgtct 33038828  T
Q  200 gacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    || ||||||||| ||||| |||||| || | ||||||||| |||||||||| ||||||| ||||||||||||||||||||||||| ||||    
T  33038829 gaaaaattcagggactaagttgatatttcgcataattgagggatgaatttgaccgacccataaaaattcaaggacgaatttgatgattca 33038918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 95 - 289
Target Start/End: Original strand, 46812509 - 46812703
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| ||||| ||| ||||||||||| |||| ||| ||||| |||| |||||||||||||| ||||||| |||  ||||||||||||| |    
T  46812509 gtggcttccttcttgccacacgtacaagacaacacagcatgcagggcgacatatcagcatggctaacagagcacttggacggaatgacctttttgatgga 46812608  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | ||||||||||| ||| |||||||||||| ||    |||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||    
T  46812609 cgtctgacaaatttagggactaaattgatatttcacgtaattgagggatgaatttggccgactcgtaaaaattcaaggacgaagttgatggttca 46812703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 93 - 289
Target Start/End: Complemental strand, 40784545 - 40784349
Alignment:
Q  93 atgtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatg 192  Q
    |||||| ||||||||| |||| ||||||||||||||||||||| |||||||||||||| ||||  |||||| | | ||||| ||||||||||||||||||    
T  40784545 atgtggcttccttcttgccacgtgtataagacaacacaacatgcaggacgacagatcagcatgattaacagcgcatttggacggagggacctttttgatg 40784446  T
Q  193 aacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
     |  |||||||||||||   ||||| |||||| || | ||||||||  ||||||||| || ||| |||||||||||||| |||||||||||||||||    
T  40784445 gatgtctgacaaattcaaagactaagttgatatttcgcataattgaaggatgaatttagctgacgcgtaaaaattcaagaacgaatttgatggttca 40784349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 152 - 295
Target Start/End: Original strand, 47341670 - 47341813
Alignment:
Q  152 catggctaacagagtacttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttgg 251  Q
    |||||||||| ||| ||||||| ||||  ||||||||||| ||| ||||||||||||||| ||||| |||||| || | ||||||||| |||||||||||    
T  47341670 catggctaacggagcacttggacggagatacctttttgattaacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttgg 47341769  T
Q  252 ccgacccgtaaaaattcaaggacgaatttgatggttcattcaaa 295  Q
    ||||||||| |||||||||||||||||||||||||||| |||||    
T  47341770 ccgacccgtgaaaattcaaggacgaatttgatggttcactcaaa 47341813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 95 - 289
Target Start/End: Complemental strand, 23954002 - 23953808
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| |||||| || |||| |||| |||||||||||||||| | | ||||| |||| |||||||||| ||| ||||||| |||||||||||||||||  |    
T  23954002 gtggcttcctttttgccacgtgtacaagacaacacaacatgcatggcgacatatcagcatggctaacggagcacttggacggagggacctttttgattga 23953903  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | ||||||||||||| | ||||| |||||| || | ||||||||  || ||||||  |||||||||||||||| |||||||||||||||||||||    
T  23953902 cgtctgacaaattcacggactaagttgatatttcgcataattgatggacgaattttaccgacccgtaaaaatttaaggacgaatttgatggttca 23953808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 95 - 289
Target Start/End: Original strand, 46996629 - 46996823
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| ||||  ||| ||||||||||| |||| | | |||||||||| ||| |||||| ||| ||||||| |||||||||||||||||| |    
T  46996629 gtggcttccttcttgccacgcgtacaagacaacacagcatgcaaggcgacagatcagcatcgctaacggagcacttggacggagggacctttttgatgga 46996728  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | ||||||||||||||  ||||| |||||| || | ||||||||| || ||| ||||||||| ||| |||||||| |||||||||||||||||||    
T  46996729 cgtctgacaaattcagtgactaagttgatatttcgcataattgagggacgaagttggccgacgcgtgaaaattcagggacgaatttgatggttca 46996823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 115 - 289
Target Start/End: Complemental strand, 27955547 - 27955373
Alignment:
Q  115 tgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatctgacaaattcaggaac 214  Q
    |||| |||||||||||||||| || |||||| |||| |||| ||||| ||| ||||||| |||||||||| ||||||| || |||||||||||||| ||     
T  27955547 tgtacaagacaacacaacatgcagcacgacacatcagcatgactaacggagcacttggacggagggacctctttgatggacgtctgacaaattcagaaat 27955448  T
Q  215 taaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||| |||||| || | | ||||||| ||||||||| || || |||||||||||||||||||||||||||| ||||    
T  27955447 taagttgatatttcgtaaaattgagggatgaatttagctgatccgtaaaaattcaaggacgaatttgatgattca 27955373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 110 - 289
Target Start/End: Complemental strand, 2167661 - 2167482
Alignment:
Q  110 ccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatctgacaaattca 209  Q
    |||| |||| ||||||||||| |||| |||  ||||  ||| |||||||||  ||| ||||||| ||||||||||||||||||  | |||||||||||||    
T  2167661 ccacgtgtacaagacaacacatcatgcagggtgacacgtcagcatggctaatggagcacttggacggagggacctttttgatgggcgtctgacaaattca 2167562  T
Q  210 ggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    || ||||| |||||| || | ||||||||| |||||||||| ||||||||||  |||||||||||  |||||||||||||    
T  2167561 gggactaagttgatatttcgcataattgagggatgaatttgaccgacccgtactaattcaaggacatatttgatggttca 2167482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 141 - 289
Target Start/End: Original strand, 38614885 - 38615032
Alignment:
Q  141 cgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgaga 240  Q
    |||||||||| |||||||||||||| |||| || |||||||| ||||| ||| || ||||||||||||||| ||||| || ||| || | |||||||||     
T  38614885 cgacagatcagcatggctaacagagcacttagacggagggacattttt-atggacgtctgacaaattcagggactaagttaatatttcgcataattgagg 38614983  T
Q  241 gatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||  |||||||| |||||| |||||||||||||||| ||||    
T  38614984 gatgaatttgatcgacccgtgaaaatttaaggacgaatttgatgtttca 38615032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 146 - 289
Target Start/End: Original strand, 38613459 - 38613602
Alignment:
Q  146 gatcaacatggctaacagagtacttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatga 245  Q
    ||||| ||||||||||| |  |||| || | | |||| ||||| ||| || ||||||||||||||| ||||| |||||| || | ||||||||| |||||    
T  38613459 gatcagcatggctaacataacacttagacgaatggacattttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatga 38613558  T
Q  246 atttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  38613559 atttggccgacccgtgaaaattgaaggacgaatttgatggttca 38613602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 40785548 - 40785636
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | || ||||||| ||   |||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||    
T  40785548 acaaattcagggattagattgatatttcacataattgagagatgaatttggccgacccgtgaaaattcaaggacgaaattgatgattca 40785636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 100 - 287
Target Start/End: Complemental strand, 2492518 - 2492332
Alignment:
Q  100 ttccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatct 199  Q
    |||||| || |||| |||| |||||| || | ||||| || ||| ||||||||||||||||| ||| ||||| | ||||| || ||||| ||| || | |    
T  2492518 ttcctttttgccacgtgtacaagacagcagagcatgttgggcgatagatcaacatggctaacggagcacttgaacggaggaactttttt-atggacgttt 2492420  T
Q  200 gacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggtt 287  Q
    || ||||||| | | ||| |||||| || | ||||||||  ||| | |||| ||||||||||||||||| ||||||||||||||||||    
T  2492419 gaaaaattcaagtattaagttgatatttcgcataattgaaggataattttgaccgacccgtaaaaattcgaggacgaatttgatggtt 2492332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 289
Target Start/End: Original strand, 8423288 - 8423402
Alignment:
Q  175 ggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggac 274  Q
    |||||||||||||||||  || ||||| ||||||||| | |||||||||| || | ||||||||| ||  |||||||| ||||||| |||||||| ||||    
T  8423288 ggagggacctttttgattgacgtctgataaattcagggattaaattgatatttcgcataattgagggacaaatttggctgacccgtgaaaattcagggac 8423387  T
Q  275 gaatttgatggttca 289  Q
     || |||||||||||    
T  8423388 taaattgatggttca 8423402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 289
Target Start/End: Original strand, 35344297 - 35344411
Alignment:
Q  175 ggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggac 274  Q
    |||||||||||||||||| || ||| | ||||||||| | |||||||||| || | ||||||||| || ||||||||| ||||||| |||||||  ||||    
T  35344297 ggagggacctttttgatggacgtcttataaattcagggattaaattgatatttcgcataattgagggacgaatttggctgacccgtgaaaattcggggac 35344396  T
Q  275 gaatttgatggttca 289  Q
     || |||||||||||    
T  35344397 taaattgatggttca 35344411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 30108656 - 30108568
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | |||||||||| || | ||||||||| || ||| |||||||||||||||||||||| ||||||| |||||| ||||    
T  30108656 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgattca 30108568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 45465184 - 45465272
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | |||||||||| || | ||||||||| || ||| ||| |||||||||||||||||||||||||| |||||| ||||    
T  45465184 acaaattcagggattaaattgatatttcgcataattgagggacgaagttgaccgacccgtaaaaattcaaggacgaagttgatgattca 45465272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 2168834 - 2168922
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||| | |||||||||||| |||   ||||| || ||||||||||| ||||| ||||||||||||||||||| |||||| ||||    
T  2168834 acaaattcaaggactaaattgatatttttcttaattaagggatgaatttggacgaccagtaaaaattcaaggacgaagttgatgattca 2168922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 38614804 - 38614880
Alignment:
Q  213 actaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||| |||||| |||| ||||||||| |||||||||| ||||||| |||||||||||||||| | |||||| ||||    
T  38614804 actaagttgatattttgcataattgagggatgaatttgaccgacccataaaaattcaaggacgtagttgatgattca 38614880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 201 - 295
Target Start/End: Complemental strand, 4321129 - 4321035
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattcaaa 295  Q
    ||||||||||| | |||||||||| || | |||||| || || ||| ||||||||||||| |||||||| ||||||| |||||| |||| |||||    
T  4321129 acaaattcagggattaaattgatatttcgcataattaagggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattcactcaaa 4321035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 33037754 - 33037701
Alignment:
Q  231 ataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatg 284  Q
    ||||||||| |||||||||||||||| | |||||||||||||||||| ||||||    
T  33037754 ataattgagggatgaatttggccgacacataaaaattcaaggacgaacttgatg 33037701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 8421507 - 8421419
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | |||||||||| || | ||||||||| || ||||||||||||||||| | |||||| |||| || |||||| ||||    
T  8421507 acaaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgataattcagggactaagttgatgattca 8421419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 35342516 - 35342428
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | |||||||||| || | ||||||||| ||  |||||||||||||||||| |||||| |||| || |||||| ||||    
T  35342516 acaaattcagggattaaattgatatttcgcataattgagggacaaatttggccgacccgtaataattcagggactaagttgatgattca 35342428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 46810796 - 46810708
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | |||||||||| || | ||||||||| ||  ||||||||||| |||| |||||||| ||||||| |||||| ||||    
T  46810796 acaaattcagggattaaattgatatttcgcataattgagggactaatttggccgatccgtgaaaattcagggacgaagttgatgattca 46810708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 46994751 - 46994663
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | |||||||||| || | ||||||||  || ||| ||||||||||||| |||||||| ||||||| |||||| ||||    
T  46994751 acaaattcagggattaaattgatatttcgcataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattca 46994663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 47339853 - 47339784
Alignment:
Q  215 taaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatg 284  Q
    |||||||||| || | || ||||||||| ||| |||||||||||||| ||||||| ||||||| ||||||    
T  47339853 taaattgatatttcgcatcattgagagacgaagttggccgacccgtagaaattcagggacgaagttgatg 47339784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 3690241 - 3690153
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||| | | |||||||||| || | |||||||||  | ||| |||||||| | ||||||||||||||||||| |||||| ||||    
T  3690241 acaaattcaaggattaaattgatatttcgcataattgaggaacgaagttggccgaactgtaaaaattcaaggacgaagttgatgattca 3690153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 282
Target Start/End: Complemental strand, 33775497 - 33775418
Alignment:
Q  203 aaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttga 282  Q
    ||||||||| | |||||||||| || | ||||||||  || ||| ||| |||||||||||||||||| ||||||| ||||    
T  33775497 aaattcagggattaaattgatatttcgcataattgaaggacgaagttgaccgacccgtaaaaattcagggacgaagttga 33775418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 284
Target Start/End: Original strand, 36762680 - 36762763
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatg 284  Q
    |||||||||||   |||||||||| ||   ||||||||| ||  ||||||||||| ||||||||||||| ||||||| ||||||    
T  36762680 acaaattcaggggttaaattgatatttcacataattgagggactaatttggccgatccgtaaaaattcagggacgaagttgatg 36762763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 45463718 - 45463668
Alignment:
Q  244 gaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattcaa 294  Q
    ||||||||||||||| | |||||||| ||||||| ||||||||||| ||||    
T  45463718 gaatttggccgacccctgaaaattcagggacgaaattgatggttcactcaa 45463668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 30109742 - 30109787
Alignment:
Q  244 gaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||||||| | |||||||| ||||||| |||||||||||    
T  30109742 gaatttggccgacccctgaaaattcagggacgaaattgatggttca 30109787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 4e-57; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 95 - 295
Target Start/End: Original strand, 42897701 - 42897901
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| |||| |||| ||||||||||| |||| |||||||||||||| |||||||||||||| ||||||| |||||||||||||||||| |    
T  42897701 gtggcttccttcttgccacgtgtacaagacaacacagcatgcaggacgacagatcagcatggctaacagagcacttggacggagggacctttttgatgga 42897800  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattcaa 294  Q
    | ||||||||||||| | ||||| |||||| ||   ||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  42897801 cgtctgacaaattcaaggactaagttgatatttcacataattgagggacgaatttggccgacccgtaaaaattcaaggacggatttgatggttcactcaa 42897900  T
Q  295 a 295  Q
    |    
T  42897901 a 42897901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 103 - 287
Target Start/End: Original strand, 33160083 - 33160267
Alignment:
Q  103 cttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatctgac 202  Q
    |||||| |||| ||||||||||||||||||||| ||| |||||||||| |||||||||||||| |||| | |||||||||||||||||||  | ||||||    
T  33160083 cttcttgccacgtgtataagacaacacaacatgcagggcgacagatcagcatggctaacagagcacttaggtggagggacctttttgatgggcgtctgac 33160182  T
Q  203 aaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggtt 287  Q
    ||||||||  ||||| |||||| ||   ||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||    
T  33160183 aaattcagagactaagttgatatttcacataattgagggatgaatttggccgacctgtgaaaattcaaggacgaatttgatggtt 33160267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 95 - 289
Target Start/End: Original strand, 37525950 - 37526144
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| |||| ||||||||||||||||||||  ||||||||||||||||||| ||||||| | ||||||| |||||||||||||||||| |    
T  37525950 gtggcttccttcttgccacgtgtataagacaacacaacatacaggacgacagatcaacatgactaacagcgcacttggacggagggacctttttgatgga 37526049  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
      ||||| ||||||||| ||||| |||||| || | ||||||||   ||||||||| ||||| ||| ||||||||||||||||||||||||||||    
T  37526050 tgtctgaaaaattcagggactaagttgatatttcgcataattgaagaatgaatttgaccgacgcgtgaaaattcaaggacgaatttgatggttca 37526144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 100 - 289
Target Start/End: Original strand, 462302 - 462491
Alignment:
Q  100 ttccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatct 199  Q
    ||||||||| |||| ||||||||| ||||||||||| | | ||||| |||| |||||||||||||| ||||||||||||||| |||||||||| || | |    
T  462302 ttccttcttgccacgtgtataagataacacaacatgcacggcgacaaatcagcatggctaacagagcacttggatggagggatctttttgatggacgttt 462401  T
Q  200 gacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    |||||||||| | ||||| |||||| || | ||||||||  ||||||||||||||| | |||||||||||| ||||||||||||||||||    
T  462402 gacaaattcaaggactaagttgatatttcgcataattgacggatgaatttggccgatctgtaaaaattcaatgacgaatttgatggttca 462491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 95 - 289
Target Start/End: Complemental strand, 32822557 - 32822364
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| ||||  ||| ||||||||| | |||| | | |||||||||| |||| |||||| || ||||||| ||| |||||||||||||| |    
T  32822557 gtggcttccttcttgccacgcgtacaagacaacaaagcatgcatggcgacagatcagcatg-ctaacaaagcacttggacggaaggacctttttgatgga 32822459  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||||||||| ||||| |||||| ||| |||||||||| ||||||||||||||| || |||||||||||||||||| |||||||||||    
T  32822458 catctgacaaattcagggactaagttgatattttaaataattgagggatgaatttggccgatccataaaaattcaaggacgaagttgatggttca 32822364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 120 - 289
Target Start/End: Original strand, 38882749 - 38882918
Alignment:
Q  120 aagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatctgacaaattcaggaactaaat 219  Q
    ||||||||||| |||| ||||||||||||||||||||||||| ||| ||||||| |||||||| ||||| ||| || ||||||||||||||| | |||||    
T  38882749 aagacaacacagcatgcaggacgacagatcaacatggctaacggagcacttggacggagggacattttttatggacgtctgacaaattcagggattaaat 38882848  T
Q  220 tgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    |||||  | | ||| ||||  |||||||||| |||| |||| ||||||||||||||||||||||||||||    
T  38882849 tgatatctcgcatagttgaaggatgaatttgaccgatccgtgaaaattcaaggacgaatttgatggttca 38882918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 100 - 255
Target Start/End: Original strand, 33750316 - 33750471
Alignment:
Q  100 ttccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatct 199  Q
    ||||||||| ||||  ||| |||||||||||||||| | |||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||  |||    
T  33750316 ttccttcttgccacgcgtacaagacaacacaacatgcaagacgacagatcaacatcgctaacagagcacttggacggagggacctttttgatgaatgtct 33750415  T
Q  200 gacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccga 255  Q
    |||||||||||| ||||| |||||| || | ||||||||| || ||| ||||||||    
T  33750416 gacaaattcagggactaagttgatatttcgcataattgagggacgaagttggccga 33750471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 95 - 289
Target Start/End: Complemental strand, 1320814 - 1320620
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| |||| |||| ||||||||| | |||| ||| |||||  ||| ||||||| || ||  ||||||| ||| ||||||| || ||| |    
T  1320814 gtggcttccttcttgccacgtgtacaagacaacatagcatgcagggcgacatgtcaccatggctgacggaacacttggacggaaggaccttatttatgga 1320715  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | ||||||||||||||| ||||| |||||| |||| ||||||||| ||||||||| |||||||||| |||||| |||||| ||||||||||||||    
T  1320714 cgtctgacaaattcagggactaagttgatattttgcataattgagggatgaatttagccgacccgtgaaaatttaaggacaaatttgatggttca 1320620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 120 - 289
Target Start/End: Complemental strand, 31821590 - 31821421
Alignment:
Q  120 aagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatctgacaaattcaggaactaaat 219  Q
    ||||||||||| |||| | |||||||||||| || ||||||||||| ||||||| |||||||||||||||||| || ||||| |||||| || ||||| |    
T  31821590 aagacaacacatcatgcaagacgacagatcagcaaggctaacagaggacttggacggagggacctttttgatggacgtctgataaattctgggactaagt 31821491  T
Q  220 tgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||| || | ||||||||| || ||| ||| |||||  || |||||||| ||||||||||||| |||||    
T  31821490 tgatatttcgcataattgagggacgaagttgaccgacgtgtgaaaattcagggacgaatttgattgttca 31821421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 93 - 289
Target Start/End: Complemental strand, 8654698 - 8654503
Alignment:
Q  93 atgtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatg 192  Q
    |||||| ||||||||| |||| |||| |||||||||   |||| ||| |||||  ||| |||||||||| ||| ||||||| ||||||||| ||||||||    
T  8654698 atgtggcttccttcttgccacgtgtacaagacaacattgcatgcagggcgacatgtcagcatggctaacggagcacttggacggagggacccttttgatg 8654599  T
Q  193 aacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
     || ||||| ||||||| ||| ||||| |||| || | |||||||||  | ||||||| ||||| ||||||||||||  ||| || |||||||||||    
T  8654598 gacgtctgataaattcaagaattaaat-gatatttcgcataattgaggaacgaatttgaccgactcgtaaaaattcagagactaaattgatggttca 8654503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 289
Target Start/End: Original strand, 31201150 - 31201264
Alignment:
Q  175 ggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggac 274  Q
    |||||||||||||||||| || ||||| ||||||||| | |||||||||| || | ||||||||  || ||||||||||||||||| |||||||| ||||    
T  31201150 ggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgatggacgaatttggccgacccgtgaaaattcagggac 31201249  T
Q  275 gaatttgatggttca 289  Q
     || |||||||||||    
T  31201250 taaattgatggttca 31201264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 40019247 - 40019159
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | |||||||||| || | ||||||||| || ||| ||||||||||||||||||||||| |||||| |||||| ||||    
T  40019247 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcaaagacgaagttgatgattca 40019159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 201 - 284
Target Start/End: Complemental strand, 461267 - 461184
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatg 284  Q
    ||||||||||| | ||||||| || ||   ||||||||| |||||||||||||||||||| |||||||||||||||| ||||||    
T  461267 acaaattcagggattaaattgttatttcacataattgagggatgaatttggccgacccgtgaaaattcaaggacgaagttgatg 461184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 95 - 289
Target Start/End: Complemental strand, 9184580 - 9184386
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    ||||||||||| ||  |||||||| ||||||||||| |||| ||| |||||||||| ||   ||||   || | ||||| ||||||||| ||| |||  |    
T  9184580 gtggattccttgttgacacatgtacaagacaacacatcatgcagggcgacagatcagcagcactaatgaagcatttggacggagggaccatttcgatcga 9184481  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | ||||||||||||||| ||||| |||||| || |  || ||| | || ||||||||||||  |||  ||||||||||||||| |||||| ||||    
T  9184480 cgtctgacaaattcagggactaatttgatatttcgcgtagttgggcgacgaatttggccgattcgtgcaaattcaaggacgaaattgatgattca 9184386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 289
Target Start/End: Original strand, 25373618 - 25373710
Alignment:
Q  197 tctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||||||||| ||| |||||| || | |||||||||  ||||||||||||||  ||| |||||||||||| ||| |||||| ||||    
T  25373618 tctgacaaattcaggaattaagttgatatttcgcataattgaggaatgaatttggccgatgcgtgaaaattcaaggatgaacttgatgattca 25373710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 33368850 - 33368762
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||| | | |||||||||| || | |||||||||||||||||| | ||||  ||||||||||||| ||||||||||||| ||||    
T  33368850 acaaattcaaggattaaattgatatttcgcataattgagagatgaattcgaccgattcgtaaaaattcaaagacgaatttgatgattca 33368762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 33748423 - 33748335
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||||| |||||||||| || | ||||||||  || ||| ||||||||||||| |||||||| ||||||| |||||| ||||    
T  33748423 acaaattcaggaattaaattgatatttcgcataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattca 33748335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 25707301 - 25707389
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | ||| |||||| || | ||||||||| |||||||||||||||  |||||||||| ||||| ||| |||||| ||||    
T  25707301 acaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatgcgtaaaaatttaaggatgaacttgatgattca 25707389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 284
Target Start/End: Original strand, 31823476 - 31823559
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatg 284  Q
    ||||||| ||| | |||||||||| || | ||||||||| || ||| ||||||||||||| |||||||| ||||||| ||||||    
T  31823476 acaaatttagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtgaaaattcagggacgaagttgatg 31823559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 277
Target Start/End: Complemental strand, 37524919 - 37524873
Alignment:
Q  231 ataattgagagatgaatttggccgacccgtaaaaattcaaggacgaa 277  Q
    |||||| || |||||||||| ||||||||||||||||||||||||||    
T  37524919 ataattaagggatgaatttgaccgacccgtaaaaattcaaggacgaa 37524873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 289
Target Start/End: Complemental strand, 38881489 - 38881431
Alignment:
Q  231 ataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||| |||||||||||| ||  ||| ||||||||||||||||||||||| ||||    
T  38881489 ataattgagggatgaatttggctgattcgtgaaaattcaaggacgaatttgatgattca 38881431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 284
Target Start/End: Complemental strand, 42894867 - 42894784
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatg 284  Q
    ||||||||||| | |||||||||| || | |||||| || || |||||||| |||||||| ||||||||| ||| || ||||||    
T  42894867 acaaattcagggattaaattgatatttcgcataattaagggacgaatttggtcgacccgtgaaaattcaaagacaaagttgatg 42894784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 282
Target Start/End: Original strand, 8609808 - 8609921
Alignment:
Q  169 ttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattc 268  Q
    ||||| ||||||||| |||||||| || ||||  ||||||||| ||||||| |||| || | | |||| || || ||||||||||||    | |||||||    
T  8609808 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattc 8609907  T
Q  269 aaggacgaatttga 282  Q
    ||| ||||||||||    
T  8609908 aagaacgaatttga 8609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 282
Target Start/End: Complemental strand, 13282601 - 13282488
Alignment:
Q  169 ttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattc 268  Q
    ||||| ||||||||| |||||||| || | ||  ||||||||| ||||||| |||| || | | |||| || || ||||||||||||    | |||||||    
T  13282601 ttggacggagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattc 13282502  T
Q  269 aaggacgaatttga 282  Q
    ||||||||||||||    
T  13282501 aaggacgaatttga 13282488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 277
Target Start/End: Complemental strand, 24526987 - 24526911
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaa 277  Q
    ||||||||||| | |||||||||| ||   ||||||||| || ||| |||||||||||||  ||||||| |||||||    
T  24526987 acaaattcagggattaaattgatatttcacataattgagggacgaagttggccgacccgtgtaaattcagggacgaa 24526911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 31199576 - 31199488
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | |||||||||| ||   |||||| || || ||||||||||||||||| | |||||| |||| || |||||| ||||    
T  31199576 acaaattcagggattaaattgatatttctcataattaagggacgaatttggccgacccgtgataattcagggactaagttgatgattca 31199488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 32824271 - 32824339
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattca 269  Q
    ||||||||||  | |||||||||| || | ||||||||| ||  |||||||||||||||| ||||||||    
T  32824271 acaaattcagtgattaaattgatatttcgcataattgagggactaatttggccgacccgtgaaaattca 32824339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 293
Target Start/End: Complemental strand, 33158747 - 33158655
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattca 293  Q
    ||||||||| | | |||||||||| || | ||||||||   |||||||||  | |||  |||||||||||||||||| |||||| ||||||||    
T  33158747 acaaattcaaggattaaattgatatttcgcataattgaataatgaatttgagccacctataaaaattcaaggacgaagttgatgattcattca 33158655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 1e-54; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 93 - 289
Target Start/End: Complemental strand, 42134681 - 42134485
Alignment:
Q  93 atgtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatg 192  Q
    |||||| ||||||||| |||| |||| ||||||||||| |||| |||  ||||  |||||||||||||| ||| ||||||| ||||||||||||||||||    
T  42134681 atgtggcttccttcttgccacgtgtacaagacaacacagcatgcagggtgacatgtcaacatggctaacggagcacttggacggagggacctttttgatg 42134582  T
Q  193 aacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
     || ||||||||||||||| ||||| |||||| || | ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42134581 gacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccgtaaaaattcaaggacgaatttgatggttca 42134485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 110 - 289
Target Start/End: Original strand, 18183886 - 18184064
Alignment:
Q  110 ccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatctgacaaattca 209  Q
    |||| |||| ||||||||||||||||  |||||||| |||| |||||||||| ||| ||||| ||| |||||| ||||||||| || |||||||||||||    
T  18183886 ccacgtgtacaagacaacacaacatgctggacgacaaatcagcatggctaacggagcacttg-atgaagggacatttttgatggacgtctgacaaattca 18183984  T
Q  210 ggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    || ||||| |||||| || | ||||||||| ||||| ||||||||| |||||||||||||| ||||||||||||||||||    
T  18183985 gggactaagttgatatttcgcataattgagggatgattttggccgaaccgtaaaaattcaaagacgaatttgatggttca 18184064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 95 - 294
Target Start/End: Original strand, 46638734 - 46638933
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| |||||| || ||||  ||| |||||||||||||||| | | |||||||||| |||||||||| ||| ||||||| ||||||||||||||| || |    
T  46638734 gtggcttcctttttgccacgcgtacaagacaacacaacatgcaaggcgacagatcagcatggctaacggagcacttggacggagggacctttttggtgga 46638833  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattcaa 294  Q
    | ||||||||||||| | ||||| |||||| || | ||||||||| |||||| ||||||||| ||| |||||||| | ||||||||||||||||| ||||    
T  46638834 cgtctgacaaattcaaggactaagttgatatttcgcataattgagggatgaagttggccgacgcgtgaaaattcaggaacgaatttgatggttcactcaa 46638933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 95 - 289
Target Start/End: Original strand, 33685176 - 33685369
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| |||| |||| |||||||| ||||||| ||| ||||| |||  |||||||||| ||| ||||||||||||||| ||||| |||| |    
T  33685176 gtggcttccttcttgccacgtgtacaagacaactcaacatgcagggcgacacatcggcatggctaacggagcacttggatggagggatctttt-gatgga 33685274  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
     || |||||||||||   | |||||||||| || | ||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||    
T  33685275 gatgtgacaaattcaatgattaaattgatatttcgcataattgagggatgaatttgaccgacccgtaaaaattcagggacgaatttgatggttca 33685369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 95 - 289
Target Start/End: Original strand, 36895437 - 36895631
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| ||||  ||| |||||||||||||||| | |||||||||||| |||||||||| ||| ||||||| | |||||||||||||||| |    
T  36895437 gtggcttccttcttgccacgcgtacaagacaacacaacatgcaagacgacagatcagcatggctaacggagcacttggacgaagggacctttttgatgga 36895536  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | ||||||||||||||| ||||| |||||| || | ||||||||  || ||| ||| ||||| ||| |||||||| |||| ||||||||||||||    
T  36895537 cgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaagttgaccgacgcgtgaaaattcagggacaaatttgatggttca 36895631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 95 - 289
Target Start/End: Complemental strand, 44157630 - 44157436
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| |||| |||| |||||||||||||||| ||| |||||  |||  |||||| || ||| |||| || ||| |||| ||||| ||| |    
T  44157630 gtggcttccttcttgccacgtgtacaagacaacacaacatgcagggcgacatgtcactatggctgacggagcacttagacggaaggactttttttatgga 44157531  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | ||| ||||||||||| ||||| |||||| |||| ||||||||| |||||||||||||||||||| |||||| |||||||| ||||||||||||    
T  44157530 cgtctaacaaattcagggactaagttgatattttgcataattgagggatgaatttggccgacccgtgaaaatttaaggacgagtttgatggttca 44157436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 95 - 276
Target Start/End: Original strand, 45380911 - 45381092
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| |||| |||| ||||||||||| |||| ||| |||||  ||| |||||||||| ||| ||||||| ||||| |||||||||||| |    
T  45380911 gtggcttccttcttgccacgtgtacaagacaacacagcatgcagggcgacatgtcaccatggctaacggagcacttggacggaggaacctttttgatgga 45381010  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacga 276  Q
    | ||||||||||||| ||||||| |||||| || | ||||||||| |||||||||| ||  |||||||||||| ||||||||    
T  45381011 cgtctgacaaattcatgaactaagttgatatttcgcataattgagggatgaatttgaccttcccgtaaaaatttaaggacga 45381092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 95 - 289
Target Start/End: Original strand, 35479903 - 35480096
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||| ||||| ||||  ||| ||||||||| | |||| | | |||||||||| |||| ||||||||| ||||||| ||| |||||||||||||| |    
T  35479903 gtggcttctttcttgccacgcgtacaagacaacaaagcatgcatggcgacagatcagcatg-ctaacagagcacttggacggaaggacctttttgatgga 35480001  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | |||||||||||||   | ||| |||||| || | ||||||||| |||||||||||| || |||| |||||||||||||||| |||||||||||    
T  35480002 cgtctgacaaattcatagattaagttgatatttcgcataattgagggatgaatttggctgatccgtgaaaattcaaggacgaagttgatggttca 35480096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 100 - 283
Target Start/End: Complemental strand, 31801825 - 31801642
Alignment:
Q  100 ttccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatct 199  Q
    ||||||||| ||||  ||| |||||||||||||||| | ||||||| |||| |||||||||| ||| ||||||| |||||||||||||||||| || |||    
T  31801825 ttccttcttgccacgcgtacaagacaacacaacatgcaagacgacaaatcagcatggctaacggagcacttggacggagggacctttttgatggacgtct 31801726  T
Q  200 gacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgat 283  Q
     ||||||| | | ||||| |||||| || | ||||||||| || ||| ||| |||||  || |||||| | |||||||||||||    
T  31801725 cacaaatttaaggactaagttgatatttcgcataattgagggacgaagttgaccgacgtgtgaaaatttagggacgaatttgat 31801642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 295
Target Start/End: Original strand, 47269463 - 47269583
Alignment:
Q  175 ggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggac 274  Q
    |||||||||||||||||| || | ||||||||||||| |  ||||||| | || | ||||||||| ||  |||||||||||| ||| |||||||| ||||    
T  47269463 ggagggacctttttgatggacgtttgacaaattcagggatgaaattgaaatttcgtataattgagggactaatttggccgacgcgtgaaaattcagggac 47269562  T
Q  275 gaatttgatggttcattcaaa 295  Q
    ||||||||||||||| |||||    
T  47269563 gaatttgatggttcactcaaa 47269583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 175 - 289
Target Start/End: Complemental strand, 27940725 - 27940611
Alignment:
Q  175 ggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggac 274  Q
    |||||||||||||||||| || ||||| ||||||| | | |||||||||| || | ||||||||| || ||||||| || ||| || |||||||| ||||    
T  27940725 ggagggacctttttgatggacgtctgataaattcaaggattaaattgatatttcgcataattgagggacgaatttgaccaacctgtgaaaattcagggac 27940626  T
Q  275 gaatttgatggttca 289  Q
     || |||||||||||    
T  27940625 taaattgatggttca 27940611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 289
Target Start/End: Complemental strand, 5783423 - 5783367
Alignment:
Q  233 aattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  5783423 aattgggagatgaatttggccgacccctaaaaattcagggacgaaattgatggttca 5783367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 289
Target Start/End: Complemental strand, 35478176 - 35478090
Alignment:
Q  203 aaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||| | |||||||||| |||| ||||||||| ||  |||||||||||||||| |||||||| ||| ||| |||||| ||||    
T  35478176 aaattcagggattaaattgatattttgcataattgagggactaatttggccgacccgtgaaaattcagggatgaagttgatgattca 35478090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 274
Target Start/End: Complemental strand, 18180591 - 18180518
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggac 274  Q
    ||||||||||||| |||||||||| || | ||||||||| |||||||||||||||  ||| |||||||| ||||    
T  18180591 acaaattcaggaattaaattgatatttcgcataattgagggatgaatttggccgagtcgtgaaaattcagggac 18180518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 5784867 - 5784955
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | |||||||||| || | ||||||||| || ||| ||| ||||||||| |||||||| ||||||| |||||| ||||    
T  5784867 acaaattcagggattaaattgatatttcgcataattgagggacgaagttgaccgacccgtgaaaattcagggacgaagttgatgattca 5784955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 11152636 - 11152548
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    |||||||| || | |||||||||| || | ||||||||| || ||| ||||||||||||| |||||||| ||||||| |||||| ||||    
T  11152636 acaaattctgggattaaattgatatttcgcataattgagggacgaaattggccgacccgtgaaaattcagggacgaagttgatgattca 11152548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 31803700 - 31803788
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | |||||||||| || | ||||||||  || ||| ||||||||||||| |||||||| ||||||| |||||| ||||    
T  31803700 acaaattcagggattaaattgatatttcgcataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattca 31803788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 33679350 - 33679262
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||| | | |||||||||| || | ||||||||| || ||||||||| |||||||||||||||| |||| || |||||| ||||    
T  33679350 acaaattcaaggattaaattgatatttcgcataattgagggacgaatttggctgacccgtaaaaattcatggacaaaattgatgattca 33679262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 284
Target Start/End: Original strand, 27952500 - 27952583
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatg 284  Q
    ||||||||||| | |||||||||| || | ||||||||| || ||||||||||||||||| | |||||| |||| || ||||||    
T  27952500 acaaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgataattcagggactaagttgatg 27952583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 95 - 223
Target Start/End: Complemental strand, 6575387 - 6575261
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| ||||  ||| ||||||||| | |||| | ||||||| |||| ||||||  |||||| |||| || ||| |||||||||||||  |    
T  6575387 gtggcttccttcttgccacgcgtacaagacaacaaagcatgcatgacgacatatcagcatggc--acagagcactttgacggaaggacctttttgataga 6575290  T
Q  195 catctgacaaattcaggaactaaattgat 223  Q
      ||||||||||||||| ||||| |||||    
T  6575289 tgtctgacaaattcagggactaagttgat 6575261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 282
Target Start/End: Original strand, 34778139 - 34778252
Alignment:
Q  169 ttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattc 268  Q
    ||||| ||||||||| |||||||| |||||||  ||||||||| ||||| |||||| || | | |||| || || | ||||||||||    | |||||||    
T  34778139 ttggacggagggaccattttgatggacatctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttggccgattttttaaaattc 34778238  T
Q  269 aaggacgaatttga 282  Q
    ||||||||||||||    
T  34778239 aaggacgaatttga 34778252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 44159294 - 44159382
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||||| |||||||||| |||| |||||| || || ||| ||| |||| | || |||||||| ||||||| |||||| ||||    
T  44159294 acaaattcaggaattaaattgatattttgcataattaagggacgaaattgaccgatctgtgaaaattcagggacgaagttgatgattca 44159382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 45379176 - 45379088
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||| ||| | |||||||||| || | |||||| || || ||| ||||||||||||| |||||||| ||||||| |||||| ||||    
T  45379176 acaaatttagggattaaattgatatttcgcataattaagggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattca 45379088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 282
Target Start/End: Original strand, 4855967 - 4856080
Alignment:
Q  169 ttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattc 268  Q
    ||||| ||||||||| |||||||| || ||||  ||||||||| ||||| |||||| || | | |||| || || | ||||||||||    | |||||||    
T  4855967 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttggccgattttttaaaattc 4856066  T
Q  269 aaggacgaatttga 282  Q
    ||||||||||||||    
T  4856067 aaggacgaatttga 4856080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 36894883 - 36894830
Alignment:
Q  231 ataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatg 284  Q
    ||||||||  || ||| |||||||||||||||||||||| ||||||| ||||||    
T  36894883 ataattgaatgacgaagttggccgacccgtaaaaattcagggacgaagttgatg 36894830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 7e-53; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 93 - 294
Target Start/End: Original strand, 51041856 - 51042056
Alignment:
Q  93 atgtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatg 192  Q
    |||||| ||||||||| |||| ||||||||||||||||||||| ||| |||||||||| ||||||||||| || ||||||||||||||||||||||||||    
T  51041856 atgtggcttccttcttgccacgtgtataagacaacacaacatgcagggcgacagatcagcatggctaacaaagcacttggatggagggacctttttgatg 51041955  T
Q  193 aacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattc 292  Q
     || ||||||||||||| | ||||| |||||| ||   ||||||||| |||||||||| |||||| ||||||||| |||||||||||||| |||||| ||    
T  51041956 -acgtctgacaaattcatggactaagttgatatttcacataattgagggatgaatttgaccgacctgtaaaaatttaaggacgaatttgacggttcactc 51042054  T
Q  293 aa 294  Q
    ||    
T  51042055 aa 51042056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 95 - 289
Target Start/End: Original strand, 44558420 - 44558614
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| ||||  ||| ||||||||| | |||| | |  ||||||||| ||||||||||| || ||||||| ||| |||||||||||||| |    
T  44558420 gtggcttccttcttgccacgcgtacaagacaacagagcatgcatggtgacagatcagcatggctaacatagcacttggacggaaggacctttttgatgga 44558519  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | ||||||||||||||| ||||| |||||| || | ||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  44558520 cgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattcaaggacgaagttgatggttca 44558614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 95 - 282
Target Start/End: Complemental strand, 27625003 - 27624816
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| ||||| ||| ||||||||| | |||| | | ||||||||||||||||||||||||| |||| || |||  ||||||||||||| |    
T  27625003 gtggcttccttcttgccacacgtacaagacaacaaagcatgcatggcgacagatcaacatggctaacagagcactttgacggaatgacctttttgatgga 27624904  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttga 282  Q
    | ||||||||||||||| ||||| |||||| || | |||||||| ||||||||||| || |||||||||||||||||| |||| ||||    
T  27624903 cgtctgacaaattcagggactaagttgatatttcgcataattgaaagatgaatttgaccaacccgtaaaaattcaagggcgaagttga 27624816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 110 - 294
Target Start/End: Complemental strand, 4519558 - 4519374
Alignment:
Q  110 ccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatctgacaaattca 209  Q
    |||| |||| ||||||||||| |||| ||| |||||||||| |||||||||| ||| | ||||| ||||||||||||||||||||  ||| |||||||||    
T  4519558 ccacgtgtacaagacaacacagcatgcagggcgacagatcagcatggctaacggagcatttggacggagggacctttttgatgaatgtctaacaaattca 4519459  T
Q  210 ggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattcaa 294  Q
        ||||  ||||| || | ||||||||| ||||||||||||| ||| ||||||||||||||||||||||||| ||||| ||||    
T  4519458 aaggctaagctgatatttcgcataattgagggatgaatttggccaaccggtaaaaattcaaggacgaatttgattgttcactcaa 4519374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 95 - 289
Target Start/End: Complemental strand, 35996260 - 35996066
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| |||| |||| |||||||||||||||| | | |||||  ||| |||||||||| ||| ||||||| |||||||||||||||||| |    
T  35996260 gtggcttccttcttgccacgtgtacaagacaacacaacatgcatggcgacatgtcagcatggctaacggagcacttggacggagggacctttttgatgga 35996161  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | ||||| ||||||||| | |||||||||| |||| | ||||||| || ||||||| ||||||| ||||||| ||  ||| || |||||||||||    
T  35996160 cgtctgataaattcagggattaaattgatattttgcacaattgagggacgaatttgaccgacccataaaaatccagagactaaattgatggttca 35996066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 95 - 289
Target Start/End: Complemental strand, 47942008 - 47941814
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| ||||  ||| |||||| ||||||||| | | |||||  ||| |||||||||| |||  | |  | |||||||||||||||||| |    
T  47942008 gtggcttccttcttgccacgcgtacaagacagcacaacatgcaaggcgacatgtcagcatggctaacggagcccgttaacggagggacctttttgatgga 47941909  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | ||||| ||||||||| | |||||||||| || | |||||||||||| ||||||| |||||||||||||||||| |||| || |||||||||||    
T  47941908 cgtctgataaattcagggattaaattgatatttcgcataattgagagacgaatttgaccgacccgtaaaaattcagggactaaattgatggttca 47941814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 95 - 289
Target Start/End: Complemental strand, 2827601 - 2827410
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| ||||  ||| ||||||||||| |||| | |||||||||||| || ||||||| ||| ||||||| |||||||||||||||||| |    
T  2827601 gtggcttccttcttgccacgcgtacaagacaacacatcatgcaagacgacagatcagcaaggctaacggaggacttggacggagggacctttttgatgga 2827502  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | ||||||||||||| | ||||| |||||| ||   ||||||||| || |   |||||||||  || |||||| | |||||||||||||||||||    
T  2827501 cgtctgacaaattcaaggactaagttgatatttcacataattgagggacg---ttggccgacgtgtgaaaatttagggacgaatttgatggttca 2827410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 289
Target Start/End: Original strand, 2350431 - 2350628
Alignment:
Q  95 gtggattccttcttaccacatgtataaga---caacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgat 191  Q
    |||| ||||||||| |||| |||| ||||   ||||||| |||| ||  |||||  ||| |||||||||| ||| |||||||  ||||||||||||||||    
T  2350431 gtggcttccttcttgccacgtgtacaagagtacaacacagcatgcagagcgacatgtcagcatggctaacggagcacttggacagagggacctttttgat 2350530  T
Q  192 gaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    |||| ||||| ||||||||  | |||||||||| || | ||||||||| ||  |||||||||||||| | |||||||| |||| || |||||||||||    
T  2350531 gaacgtctgataaattcagagattaaattgatatttcgcataattgagggacaaatttggccgacccatgaaaattcagggactaaattgatggttca 2350628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 175 - 289
Target Start/End: Original strand, 10372713 - 10372827
Alignment:
Q  175 ggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggac 274  Q
    |||||||||||||||||| || ||||||||||||||| |  ||||||||| || | ||||||||| ||  |||||||||||| ||| |||||||| ||||    
T  10372713 ggagggacctttttgatggacgtctgacaaattcagggatgaaattgatatttcgcataattgagggactaatttggccgacgcgtgaaaattcagggac 10372812  T
Q  275 gaatttgatggttca 289  Q
    |||||||||||||||    
T  10372813 gaatttgatggttca 10372827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 289
Target Start/End: Complemental strand, 10762698 - 10762584
Alignment:
Q  175 ggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggac 274  Q
    |||||||||||||||||| || ||||||||||||||| |  ||||||| | || | ||||||||| ||  |||||||||||| ||| |||||||| ||||    
T  10762698 ggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcagggac 10762599  T
Q  275 gaatttgatggttca 289  Q
    |||||||||||||||    
T  10762598 gaatttgatggttca 10762584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 289
Target Start/End: Original strand, 44794767 - 44794881
Alignment:
Q  175 ggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggac 274  Q
    |||||||||||||||||| || ||||| ||||||||| | |||||||||| || | ||||||||| || ||||||| |||||  || |||||||| ||||    
T  44794767 ggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaatttgaccgacgtgtgaaaattcagggac 44794866  T
Q  275 gaatttgatggttca 289  Q
     || |||||||||||    
T  44794867 taaattgatggttca 44794881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 4520451 - 4520539
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||| ||||||| |||||| || | ||||||||  |||||||||||||||| | |||||||||||||||||| |||||| ||||    
T  4520451 acaaattcaagaactaagttgatatttcgcataattgatggatgaatttggccgactcataaaaattcaaggacgaagttgatgattca 4520539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 39923007 - 39923095
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | |||||||||| || | ||||||||| || ||| |||||||||| ||||||||||| ||||||| |||||||||||    
T  39923007 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacctgtaaaaattcagggacgaaattgatggttca 39923095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 201 - 294
Target Start/End: Complemental strand, 44992899 - 44992806
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattcaa 294  Q
    ||||| ||||| | |||||||||| || | ||||||||| || ||| |||||||||||||||||||||| ||||||| |||||| |||| ||||    
T  44992899 acaaactcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgattcactcaa 44992806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 42879366 - 42879278
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||| | | |||||||||| || | ||||||||| || ||| |||||||||||||||||||||| ||||||| |||||| ||||    
T  42879366 acaaattcatggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgattca 42879278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 43778480 - 43778392
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||| ||| | |||||||||| || | ||||||||| || ||| ||| |||||||||||||||||||||||||| |||||| ||||    
T  43778480 acaaatttagggattaaattgatatttcgcataattgagggacgaagttgaccgacccgtaaaaattcaaggacgaagttgatgattca 43778392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 289
Target Start/End: Original strand, 5486092 - 5486140
Alignment:
Q  241 gatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  5486092 gatgaatttggccgacccctaaaaattcagggacgaaattgatggttca 5486140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 39085152 - 39085240
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||| | | |||||||||| || | ||||||||| || ||| ||| |||||||||||||||||| ||||||| |||||| ||||    
T  39085152 acaaattcatggattaaattgatatttcgcataattgagggacgaagttgaccgacccgtaaaaattcagggacgaagttgatgattca 39085240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 284
Target Start/End: Complemental strand, 44793025 - 44792942
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatg 284  Q
    ||||||||||| | |||||||||| || | ||||||||| || ||||||||||||||||| | |||||| |||| || ||||||    
T  44793025 acaaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgataattcagggactaagttgatg 44792942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 5484588 - 5484543
Alignment:
Q  244 gaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||    
T  5484588 gaatttggccgacccctaaaaattcatggacgaaattgatggttca 5484543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 51040826 - 51040757
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaa 270  Q
    ||||||||||| | | |||||||| || | ||||||||  |||||||||||||||||||| |||||||||    
T  51040826 acaaattcagggattgaattgatatttcgcataattgaaggatgaatttggccgacccgtgaaaattcaa 51040757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 2828411 - 2828499
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||| | | |||||||||| || | ||||||||| ||  || ||||||||||| |||||||||| ||||||| |||||| ||||    
T  2828411 acaaattcaaggattaaattgatatttcgcataattgagggacaaagttggccgacccataaaaattcagggacgaagttgatgattca 2828499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 35997767 - 35997855
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | |||||||||| ||   |||||||||  | ||||||||||||||||| |||||||| |||| || |||||| ||||    
T  35997767 acaaattcagggattaaattgatatttcttataattgaggaacgaatttggccgacccgtgaaaattcagggacaaagttgatgattca 35997855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 44556711 - 44556629
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgat 283  Q
    ||||||||| | |||||||||||| ||   ||||||||| ||  |||||| |||||||||||||||||| |||| || |||||    
T  44556711 acaaattcatggactaaattgatatttcacataattgagggactaatttgaccgacccgtaaaaattcagggacaaagttgat 44556629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 39083687 - 39083642
Alignment:
Q  244 gaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||||||| | |||||||| ||||||| |||||||||||    
T  39083687 gaatttggccgacccctgaaaattcagggacgaaattgatggttca 39083642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 39189430 - 39189385
Alignment:
Q  244 gaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||||||| | |||||||| ||||||| |||||||||||    
T  39189430 gaatttggccgacccctgaaaattcagggacgaaattgatggttca 39189385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 39921542 - 39921497
Alignment:
Q  244 gaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||||||| | |||||||| ||||||| |||||||||||    
T  39921542 gaatttggccgacccctgaaaattcagggacgaaattgatggttca 39921497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 282
Target Start/End: Original strand, 41761747 - 41761860
Alignment:
Q  169 ttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattc 268  Q
    ||||| ||||||||| |||||||| || ||||  ||||||||| ||||||| |||| || | | ||||  | || ||||||||||||    | |||||||    
T  41761747 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttcgggacgaatttggccgatttttgaaaattc 41761846  T
Q  269 aaggacgaatttga 282  Q
    ||||||||||||||    
T  41761847 aaggacgaatttga 41761860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 10371148 - 10371060
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| |  ||||||||| || | ||||||||| ||  ||||| |||||| ||| |||||||| |||| || |||||||||||    
T  10371148 acaaattcagggatgaaattgatatttcgcataattgagggactaatttagccgacgcgtgaaaattcagggactaagttgatggttca 10371060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 282
Target Start/End: Complemental strand, 48813977 - 48813797
Alignment:
Q  102 ccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatctga 201  Q
    |||| ||| |||||||| | |||||||||||||| | || |||| |||| ||   | |||||||   ||||| | ||||||| |||||||| || |||      
T  48813977 ccttgttaacacatgtacatgacaacacaacatgcaagaggacacatcatcaccaccaacagagcttttggacgaagggaccattttgatggacgtctat 48813878  T
Q  202 caaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttga 282  Q
     |||||||||||||||||  ||| |||| | |||| || ||| |||||||| ||    | |||||||||||||||||||||    
T  48813877 aaaattcaggaactaaatatatattttgcaaaattcagggataaatttggctgatttttgaaaattcaaggacgaatttga 48813797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 1e-48; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 95 - 289
Target Start/End: Original strand, 43317987 - 43318181
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| |||||| || ||||||||| |||||| |||||||||  || ||||| |||  |||||||||||||| ||||||| |||||||||||||| ||| |    
T  43317987 gtggcttcctttttgccacatgtacaagacagcacaacatgctgggcgacatatcggcatggctaacagagcacttggacggagggaccttttttatgga 43318086  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | ||||||||||||||| ||||| |||||| || | ||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  43318087 cgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccataaaaattcaaggacgaatttgatggttca 43318181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 115 - 289
Target Start/End: Original strand, 38178040 - 38178214
Alignment:
Q  115 tgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatctgacaaattcaggaac 214  Q
    |||| ||||||||||| |||| ||||||||| |||| |||||||||| ||| || |||| | |||||||||||||||| || ||||||||||||||  ||    
T  38178040 tgtacaagacaacacagcatgcaggacgacatatcagcatggctaacggagcacatggacgaagggacctttttgatggacgtctgacaaattcagatac 38178139  T
Q  215 taaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    |||||||||| || | ||||||||| |||||||||| ||||||||| |||||| ||||||||||||||| |||||    
T  38178140 taaattgatatttcgcataattgagggatgaatttgaccgacccgtgaaaatttaaggacgaatttgatagttca 38178214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 115 - 289
Target Start/End: Original strand, 38205264 - 38205438
Alignment:
Q  115 tgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatctgacaaattcaggaac 214  Q
    |||| ||||||||||| |||| ||||||||| |||| |||||||||| ||| || |||| | |||||||||||||||| || ||||||||||||||  ||    
T  38205264 tgtacaagacaacacagcatgcaggacgacatatcagcatggctaacggagcacatggacgaagggacctttttgatggacgtctgacaaattcagatac 38205363  T
Q  215 taaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    |||||||||| || | ||||||||| |||||||||| ||||||||| |||||| ||||||||||||||| |||||    
T  38205364 taaattgatatttcgcataattgagggatgaatttgaccgacccgtgaaaatttaaggacgaatttgatagttca 38205438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 95 - 289
Target Start/End: Original strand, 18728529 - 18728723
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| |||| |||| ||||||||||| |||| | |  ||||||||| || ||||||||||| ||||||| |||||||||||||||||| |    
T  18728529 gtggcttccttcttgccacgtgtacaagacaacacagcatgcaaggtgacagatcagcaaggctaacagagcacttggacggagggacctttttgatgga 18728628  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | ||||||||||||||| ||||| |||||| || | |||||| || || ||| |||||||||  || |||||||| |||||||||||||||||||    
T  18728629 cgtctgacaaattcagggactaagttgatatttcgcataattaagggacgaagttggccgacaagtgaaaattcagggacgaatttgatggttca 18728723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 93 - 289
Target Start/End: Complemental strand, 35395530 - 35395336
Alignment:
Q  93 atgtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatg 192  Q
    |||||| ||||||||| ||||  ||| ||||||||||  |||| | | ||||| |||| |||||||||||||| ||||||| ||||||||||||||||||    
T  35395530 atgtggcttccttcttgccacgcgtacaagacaacac--catgcaaggcgacatatcagcatggctaacagagcacttggacggagggacctttttgatg 35395433  T
Q  193 aacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
     || ||| |||||||||||||||||||||||| || | ||||||||| || ||| |||||||||  || |||||||| ||| |||||||||||||||    
T  35395432 gacgtctaacaaattcaggaactaaattgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggatgaatttgatggttca 35395336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 100 - 289
Target Start/End: Original strand, 35292314 - 35292502
Alignment:
Q  100 ttccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatct 199  Q
    |||||| || |||| |||| |||||| |||||||||| || ||||||||||  || |||||| ||| | ||||| ||||| |||||||| ||| || |||    
T  35292314 ttcctttttgccacgtgtacaagacagcacaacatgttgggcgacagatcagaatagctaacggagcatttggacggaggaaccttttttatggacgtct 35292413  T
Q  200 gacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    |||||||||||| ||||| |||||| || | ||||||||  ||||| ||||||| |||| ||||||||||||||||||||||||||||||    
T  35292414 gacaaattcagggactaagttgatatttcgcataattgaaggatgattttggcc-acccataaaaattcaaggacgaatttgatggttca 35292502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 95 - 294
Target Start/End: Complemental strand, 32087711 - 32087512
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| ||||  ||| ||||||||||| |||| | | ||| |||||| || ||||||||||| ||||||| |||||||||||||||||| |    
T  32087711 gtggcttccttcttgccacgcgtacaagacaacacagcatgcaaggcgatagatcagcaaggctaacagagcacttggacggagggacctttttgatgga 32087612  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattcaa 294  Q
    | ||||| ||||| ||| ||||| |||||| || | |||||| || || ||| |||  |||| ||| |||||||| ||||||||||||||||||| ||||    
T  32087611 cgtctgaaaaattaagggactaagttgatatttcgcataattaagggacgaagttgatcgacgcgtgaaaattcagggacgaatttgatggttcactcaa 32087512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 95 - 289
Target Start/End: Complemental strand, 33256597 - 33256403
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| ||||  ||| ||||||||||| |||| | |  ||||||||| || ||||||| ||| ||||||| |||||||| ||||||||| |    
T  33256597 gtggcttccttcttgccactcgtacaagacaacacagcatgcaaggtgacagatcagcaaggctaacggaggacttggacggagggacttttttgatgga 33256498  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | |||||||||||||   | ||| |||||| || | ||||||||  |||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  33256497 cgtctgacaaattcaaagattaagttgatatttcgcataattgaaggatgaagttggccgacgtgtaaaaattcagggacgaatttgatggttca 33256403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 180 - 289
Target Start/End: Complemental strand, 38596980 - 38596871
Alignment:
Q  180 gacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatt 279  Q
    ||||||||||||| || ||| ||||||||||| ||||| |||||| || | ||||||||| || ||||||||||||||| ||||||||||||||||||||    
T  38596980 gacctttttgatggacgtctaacaaattcagggactaagttgatatttcgcataattgagggacgaatttggccgacccataaaaattcaaggacgaatt 38596881  T
Q  280 tgatggttca 289  Q
    ||||||||||    
T  38596880 tgatggttca 38596871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 100 - 224
Target Start/End: Complemental strand, 38597137 - 38597013
Alignment:
Q  100 ttccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatct 199  Q
    ||||||||| |||| |||| ||||||||||| |||| ||| |||||||||| || ||||||| ||  |||||||  ||||||||||||||||| || |||    
T  38597137 ttccttcttgccacgtgtacaagacaacacagcatgcagggcgacagatcagcacggctaacggaacacttggacagagggacctttttgatggacgtct 38597038  T
Q  200 gacaaattcaggaactaaattgata 224  Q
    |||||||| ||| ||||| ||||||    
T  38597037 gacaaattaagggactaagttgata 38597013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 201 - 294
Target Start/End: Original strand, 32089925 - 32090018
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattcaa 294  Q
    ||||||||||| | |||||||||| || | ||||||||| || ||| |||||||||||||||||||||| ||||||| |||||| |||| ||||    
T  32089925 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgattcactcaa 32090018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 201 - 295
Target Start/End: Original strand, 40330515 - 40330609
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattcaaa 295  Q
    ||||||||||| | |||||||||| || | ||||||||| || || |||||||||||||| |||||||| ||||||| |||||| |||| |||||    
T  40330515 acaaattcagggattaaattgatatttcgcataattgagggacgattttggccgacccgtgaaaattcagggacgaagttgatgattcactcaaa 40330609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 284
Target Start/End: Original strand, 33257760 - 33257843
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatg 284  Q
    ||||||||||| | |||||||||| || | |||||| || || ||| |||||||||||||||||||||| ||||||| ||||||    
T  33257760 acaaattcagggattaaattgatatttcgcataattaagggacgaagttggccgacccgtaaaaattcagggacgaagttgatg 33257843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 295
Target Start/End: Complemental strand, 35291139 - 35291045
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattcaaa 295  Q
    ||||||||||| | |||||||||| ||   ||| ||||| ||||||||||||||| |||| |||||||| ||||||  |||||| |||| |||||    
T  35291139 acaaattcagggattaaattgatatttcacatagttgagggatgaatttggccgaaccgtgaaaattcagggacgacattgatgattcactcaaa 35291045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 282
Target Start/End: Complemental strand, 17574441 - 17574328
Alignment:
Q  169 ttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattc 268  Q
    ||||| ||||||||| |||||||| || ||||  ||||||||| ||||||| |||| || | | |||| || || ||||||||||||    | |||||||    
T  17574441 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattc 17574342  T
Q  269 aaggacgaatttga 282  Q
    ||||||||||||||    
T  17574341 aaggacgaatttga 17574328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 201 - 294
Target Start/End: Complemental strand, 18726656 - 18726563
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattcaa 294  Q
    ||||||| ||| |||||||||||| || | ||||||||| || ||| ||||   ||||||||||||||| ||||||| |||||| |||| ||||    
T  18726656 acaaattaagggactaaattgatatttcgcataattgagggacgaagttggggaacccgtaaaaattcagggacgaagttgatgattcactcaa 18726563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 32838447 - 32838502
Alignment:
Q  115 tgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtactt 170  Q
    |||| ||||||||||| |||||||||||||| ||||||||| ||||| ||| ||||    
T  32838447 tgtacaagacaacacagcatgtaggacgacatatcaacatgactaacggagcactt 32838502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 274
Target Start/End: Complemental strand, 24496914 - 24496761
Alignment:
Q  121 agacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaacatctgacaaattcaggaactaaatt 220  Q
    |||||||| | |||| |||||||||||||| ||    |||||||  | ||||| ||| ||||| ||||||||||| ||| ||||||||||| | ||| ||    
T  24496914 agacaacatagcatgcaggacgacagatcagcaatagtaacagaacatttggacggatggaccattttgatgaacgtctcacaaattcagggattaattt 24496815  T
Q  221 gatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggac 274  Q
    |||| ||   ||||||||| ||  |||||| ||||  |||| ||||| ||||||    
T  24496814 gatatttcacataattgagggacaaatttgaccgattcgtacaaatttaaggac 24496761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 282
Target Start/End: Original strand, 36057614 - 36057727
Alignment:
Q  169 ttggatggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattc 268  Q
    ||||| ||||||||| |||||||| || ||||  |||||||||  |||||| |||| || | | |||| || || ||||||||||||    | |||||||    
T  36057614 ttggacggagggaccattttgatggacgtctgtaaaattcagggtctaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattc 36057713  T
Q  269 aaggacgaatttga 282  Q
    ||||||||||||||    
T  36057714 aaggacgaatttga 36057727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 277
Target Start/End: Complemental strand, 38176723 - 38176647
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaa 277  Q
    ||||||||||| | |||||||||| || | |||||| || || |||||||||| |||| | |||||||| |||||||    
T  38176723 acaaattcagggattaaattgatatttcgcataattaagggacgaatttggccaacccatgaaaattcagggacgaa 38176647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 277
Target Start/End: Complemental strand, 38203947 - 38203871
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaa 277  Q
    ||||||||||| | |||||||||| || | |||||| || || |||||||||| |||| | |||||||| |||||||    
T  38203947 acaaattcagggattaaattgatatttcgcataattaagggacgaatttggccaacccatgaaaattcagggacgaa 38203871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 2e-40; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 93 - 277
Target Start/End: Original strand, 3018357 - 3018541
Alignment:
Q  93 atgtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatg 192  Q
    |||||| |||| |||| ||||  ||| ||||||||||| |||| | ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  3018357 atgtggcttccgtcttgccacgcgtacaagacaacacatcatgcaagacgatagatcaacatggctaacggagcacttggatggagggacctttttgatg 3018456  T
Q  193 aacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaa 277  Q
     || ||||||||||||||| ||||| |||||| || | ||||||||| || ||| ||||||||| ||| |||||||| |||||||    
T  3018457 gacgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttggccgacgcgtgaaaattcagggacgaa 3018541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 95 - 289
Target Start/End: Complemental strand, 29077525 - 29077331
Alignment:
Q  95 gtggattccttcttaccacatgtataagacaacacaacatgtaggacgacagatcaacatggctaacagagtacttggatggagggacctttttgatgaa 194  Q
    |||| ||||||||| ||||  ||| ||||||||||| |||| | | |||||  ||| |||||||||| |||  | |  | |||||||||||||||||| |    
T  29077525 gtggcttccttcttgccacgcgtacaagacaacacagcatgcaaggcgacatgtcagcatggctaacggagcccgttaacggagggacctttttgatgga 29077426  T
Q  195 catctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    | ||||||||||||||| |  ||||||| | || | ||||||||| ||  |||||||||||| ||| |||||||| |||||||||||||||||||    
T  29077425 cgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcagggacgaatttgatggttca 29077331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 175 - 289
Target Start/End: Complemental strand, 4641472 - 4641358
Alignment:
Q  175 ggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggac 274  Q
    |||||||||||||||||| |  ||||| ||||||||| | |||||||||| ||   ||||||||| || ||||||||||||||||| |||||||| ||||    
T  4641472 ggagggacctttttgatggaggtctgataaattcagggattaaattgatatttcacataattgagggacgaatttggccgacccgtgaaaattcagggac 4641373  T
Q  275 gaatttgatggttca 289  Q
     || |||||||||||    
T  4641372 taaattgatggttca 4641358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 289
Target Start/End: Complemental strand, 29112417 - 29112303
Alignment:
Q  175 ggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggac 274  Q
    |||||||||||||||||| || ||||||||||||||| |  ||||||| | || | ||||||||| ||  |||||||||||| ||| |||||||| ||||    
T  29112417 ggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcagggac 29112318  T
Q  275 gaatttgatggttca 289  Q
     || |||||||||||    
T  29112317 taacttgatggttca 29112303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 295
Target Start/End: Complemental strand, 35174482 - 35174388
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttcattcaaa 295  Q
    |||||||||| || |||||||||| || | |||||||||| | ||| |||||||||||||||||||||| ||||||| |||||| |||| |||||    
T  35174482 acaaattcagaaattaaattgatatttcgtataattgagaaacgaagttggccgacccgtaaaaattcagggacgaagttgatgattcactcaaa 35174388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 17950652 - 17950564
Alignment:
Q  201 acaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||| | |||||||||| || | ||||||||| || ||| |||||||||||||||||||||| ||| ||| |||||||||||    
T  17950652 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggatgaaattgatggttca 17950564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 2968252 - 2968142
Alignment:
Q  179 ggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaat 278  Q
    |||||||||||||| || ||||| ||||||||| | |||||||||| || | ||||||||| || ||||||||  ||||||| |||||| | |||| ||     
T  2968252 ggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaatttgggagacccgtgaaaattgagggactaaa 2968153  T
Q  279 ttgatggttca 289  Q
    |||||||||||    
T  2968152 ttgatggttca 2968142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 30639688 - 30639614
Alignment:
Q  215 taaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    |||||||||| |||| ||||||||| ||  |||||||||||||||| |||||||| ||||||| |||||| ||||    
T  30639688 taaattgatattttgcataattgagggactaatttggccgacccgtgaaaattcagggacgaagttgatgattca 30639614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 289
Target Start/End: Original strand, 35175934 - 35175984
Alignment:
Q  239 gagatgaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    |||| |||||||||||| || | |||||||||||||||| |||||||||||    
T  35175934 gagacgaatttggccgatccctgaaaattcaaggacgaaattgatggttca 35175984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 289
Target Start/End: Original strand, 3018543 - 3018584
Alignment:
Q  248 ttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||| ||| |||||||| |||||||||||||||||||    
T  3018543 ttggccgacgcgtgaaaattcagggacgaatttgatggttca 3018584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 17952118 - 17952163
Alignment:
Q  244 gaatttggccgacccgtaaaaattcaaggacgaatttgatggttca 289  Q
    ||||||||||||||| | |||||||| ||||||| |||||||||||    
T  17952118 gaatttggccgacccctgaaaattcagggacgaaattgatggttca 17952163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 175 - 289
Target Start/End: Original strand, 6641 - 6755
Alignment:
Q  175 ggagggacctttttgatgaacatctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggac 274  Q
    |||||||||||||||||| |  ||||| ||||||||| | |||||||||| ||   ||||||||| || ||||||||||||||||| |||||||| ||||    
T  6641 ggagggacctttttgatggaggtctgataaattcagggattaaattgatatttcacataattgagggacgaatttggccgacccgtgaaaattcagggac 6740  T
Q  275 gaatttgatggttca 289  Q
     || |||||||||||    
T  6741 taaattgatggttca 6755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 2193 - 2121
Alignment:
Q  197 tctgacaaattcaggaactaaattgatactttgaataattgagagatgaatttggccgacccgtaaaaattca 269  Q
    ||||||||||| ||| | ||| |||||| || | ||||||||| ||||||||||| |||  ||||||||||||    
T  2193 tctgacaaatttagggattaagttgatatttcgcataattgagggatgaatttggtcgatgcgtaaaaattca 2121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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