View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0814_low_18 (Length: 395)
Name: NF0814_low_18
Description: NF0814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0814_low_18 |
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Alignment Details
Target: chr2 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 94 - 380
Target Start/End: Complemental strand, 41309628 - 41309342
Alignment:
| Q |
94 |
aattgcaacagactcttttatttcttcgcattttactgtaatataaagatttgcaacgtaatcaaacttcaaccacaaatgcaatttagaatcatgacta |
193 |
Q |
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| T |
41309628 |
aattgcaacagactcttttatttcttcgcattttactgtaatataaagatttgcaacataatcaaacttcaaccacaaatgcaatttagaatcatgacta |
41309529 |
T |
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| Q |
194 |
acaagttttgtttgtggaaattcaatattcgatatgagggcaaactaatttggtgatcaatcacattgtatattatcggaggttcaatcatgtacttatt |
293 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
41309528 |
acaagttttgtttgtggaaattcaatattcgatatgagggcaaactaatttggtgatcaatcacattgtctattatcggaggttcaatcatgtacttatt |
41309429 |
T |
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| Q |
294 |
tgttcaacatgggaatcattaatactcgaggattcggacctgagacttaaagaggaacacgtctcaaacctataccactggagcaac |
380 |
Q |
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| T |
41309428 |
tattcagcatgggaatcgttaatactcgaagattcgaacctaagacttaaagaggaacacgtctcaaacctataccactggagcaac |
41309342 |
T |
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