View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0814_low_2 (Length: 766)
Name: NF0814_low_2
Description: NF0814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0814_low_2 |
 | |
|
| [»] scaffold0596 (1 HSPs) |
| | |
|
| [»] scaffold0035 (1 HSPs) |
| | |
|
| [»] scaffold0045 (1 HSPs) |
| | |
|
| [»] scaffold0096 (1 HSPs) |
| | |
|
Alignment Details
Target: chr2 (Bit Score: 586; Significance: 0; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 586; E-Value: 0
Query Start/End: Original strand, 1 - 654
Target Start/End: Complemental strand, 23349066 - 23348413
Alignment:
| Q |
1 |
atgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatct |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
23349066 |
atgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttggctaagcatgcatctcatcctttgatct |
23348967 |
T |
|
| Q |
101 |
aatctgagtcaaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacactt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23348966 |
aatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacactt |
23348867 |
T |
|
| Q |
201 |
atcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactcaaaa |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
23348866 |
atcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgcttttactcaaaa |
23348767 |
T |
|
| Q |
301 |
aattcccttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttgccgctctctctgtcgccgcagctctct |
400 |
Q |
| |
|
|| || ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
23348766 |
aaatctcttcgccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctctgccgttgccgctctctccgtcgccgcagctctct |
23348667 |
T |
|
| Q |
401 |
cctgtcgtcgcccttcaccaatgctctcgattctgacttcaccttcgacgttgtcgtctgcggcatcgtattagccaggtgtgttgaagatgctactata |
500 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
23348666 |
cctgtcgtcgcccttcaccaatgctctcgattccgacatcaccttcgccgttgtcgtctgcggcatcgtatcagccaggtgtgttgaagatgctactata |
23348567 |
T |
|
| Q |
501 |
tatatcctaaatcgttgttcttgtaacttttccctaactttgttattccattatatttttggtttgtttgtaagtgaattgatgatatttaaatagattt |
600 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23348566 |
tatatcctaaatcgttgttcctgtaacttttccctaactttgttattccattacatttttggtttgtttgtaagtgaattgatgatatttaaatagattt |
23348467 |
T |
|
| Q |
601 |
taccatcatgtattatgctattaataaattgattgatactttaaaatcatgtgt |
654 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
23348466 |
taccatcatgtattatgctgttaataaattgattgatactttaaaatcatgtgt |
23348413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 574; E-Value: 0
Query Start/End: Original strand, 1 - 690
Target Start/End: Original strand, 12741723 - 12742414
Alignment:
| Q |
1 |
atgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatct |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
12741723 |
atgaaattgcaaaccctaaacctaaatggttttggctccaaaacaaaggaggccgttggatctcatcatttggctaagcatgcatctcatcctttgatct |
12741822 |
T |
|
| Q |
101 |
aatctgagtcaaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacactt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12741823 |
aatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacactt |
12741922 |
T |
|
| Q |
201 |
atcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactcaaaa |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
12741923 |
atcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgcttttactcaaaa |
12742022 |
T |
|
| Q |
301 |
aattcccttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttgccgctctctctgtcgccgcagctctct |
400 |
Q |
| |
|
|| || ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
12742023 |
aaatctcttcgccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctctgccgttgccgctctctccgccgccgcagctctct |
12742122 |
T |
|
| Q |
401 |
cctgtcgtcgcccttcaccaatgctctcgattctgacttcaccttcgacgttgtcgtctgcggcatcgtattagccaggtgtgttgaagatgctactata |
500 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||| |
|
|
| T |
12742123 |
cctgtcgtcgcccttcaccaatgctctcgattccgacatcaccttcgtcgttgtcgtctgcggcatcgtatcagcaaggtgtgttgaagatgctactata |
12742222 |
T |
|
| Q |
501 |
tatatcctaaatcgttgttcttgtaacttttccctaactttgttattccattatatttttggtttgtttgtaagtgaattgatgatatttaaatagattt |
600 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12742223 |
tatatcctaaatcgttgttcctgtaacttttccctaactttgttattccattacatttttggtttgtttgtaagtgaattgatgatatttaaatagattt |
12742322 |
T |
|
| Q |
601 |
taccatcatgtattatgctattaataaattgattgatactttaaaatc--atgtgtannnnnnnnncaaacacaccaatatgtccattgatg |
690 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
12742323 |
taccatcatgtattatgctgttaataaattgattgatactttaaaatcatatgtgtatttttttttcaaacacaccaatatgtccattgatg |
12742414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 533; E-Value: 0
Query Start/End: Original strand, 1 - 650
Target Start/End: Complemental strand, 18355399 - 18354744
Alignment:
| Q |
1 |
atgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatct |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
18355399 |
atgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggtcgttggatctcatcatttggctaagcatgcatctcatcctttaatct |
18355300 |
T |
|
| Q |
101 |
aatctgagtcaaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacactt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18355299 |
aatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacactt |
18355200 |
T |
|
| Q |
201 |
atcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactcaaaa |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
18355199 |
atcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgcttttactcaaaa |
18355100 |
T |
|
| Q |
301 |
aattcccttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttgccgctctctctgtcgccgcagctctct |
400 |
Q |
| |
|
|| || ||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
18355099 |
aaatctcttcgccctttgagttgttcatcttccatctcactctcagacattcaaacaaaattctctgccgttgccgctctctccgtcgccgcagctctct |
18355000 |
T |
|
| Q |
401 |
cctgtcgtcgcccttcaccaatgctctcgattctgacttcaccttcgacgttgtcgtctgcggcatcgtattagccaggtgtgttgaagatgctactata |
500 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| ||||||||| ||||| ||||||||| |||||| || ||||||||||||||||||||||||| |
|
|
| T |
18354999 |
cctgtcgtcgcccttcaccaatgctctcgattccgacatcaccttcgctgttgttgtctgcggcgtcgtatcagtcaggtgtgttgaagatgctactata |
18354900 |
T |
|
| Q |
501 |
t------atatcctaaatcgttgttcttgtaacttttccctaactttgttattccattatatttttggtttgtttgtaagtgaattgatgatatttaaat |
594 |
Q |
| |
|
| ||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18354899 |
tatatatatatcctaaatcgttgttcctgtagcttttccctaactttgttattccattacatttttggtttgtttgtaagtgaattgatgatatttaaat |
18354800 |
T |
|
| Q |
595 |
agattttaccatcatgtattatgctattaataaattgattgatactttaaaatcat |
650 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
18354799 |
agattttaccatcatgtattatgctcttaataaattgattgatactttaaaatcat |
18354744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 1 - 358
Target Start/End: Complemental strand, 10328978 - 10328626
Alignment:
| Q |
1 |
atgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatccttt-gatc |
99 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| || |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
10328978 |
atgaaattgcaaaccctaaacctaaattgttttggttctaaaacaagggaggccgttggatctcatcatttggctaagcatgcatctcatccttttgatc |
10328879 |
T |
|
| Q |
100 |
taatctgagtcaaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacact |
199 |
Q |
| |
|
||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10328878 |
taatctgagtcaaatttgaaaatttgattt------cctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacact |
10328785 |
T |
|
| Q |
200 |
tatcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactcaaa |
299 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||| |
|
|
| T |
10328784 |
tatcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaatttagattgcttttactcaaa |
10328685 |
T |
|
| Q |
300 |
aaattcccttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaa |
358 |
Q |
| |
|
||| || ||||||||||||||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
10328684 |
aaaatctcttcgccctttgagttgttcatcttccacctcactctcagacattcaaacaa |
10328626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 487 - 690
Target Start/End: Complemental strand, 10328627 - 10328422
Alignment:
| Q |
487 |
aagatgctactatatatat--cctaaatcgttgttcttgtaacttttccctaactttgttattccattatatttttggtttgtttgtaagtgaattgatg |
584 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
10328627 |
aagatgctactatatatatatcctaaatcgttgttcatgtatcttttccctaactttgttattccattacatttttggtttgtttgtaagtgaattgatg |
10328528 |
T |
|
| Q |
585 |
atatttaaatagattttaccatcatgtattatgctattaataaattgattgatactttaaaatcatgtgtannnnnnnnncaaacacaccaatatgtcca |
684 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
10328527 |
atatttaaatagattttaccatcatgtattatgctgttaataaattgattgatactttaaaatcatgtgtatttttttttcaaacacaccaatatgtcca |
10328428 |
T |
|
| Q |
685 |
ttgatg |
690 |
Q |
| |
|
|||||| |
|
|
| T |
10328427 |
ttgatg |
10328422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 1615984 - 1615862
Alignment:
| Q |
17 |
taaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaatctgagtcaaattt |
116 |
Q |
| |
|
|||| |||||||||||| |||||||| ||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||| || |
|
|
| T |
1615984 |
taaatctaaatggtttttgctccaaa-caagggagatcgttggatcgcatcatttggctaagcatgcatctcatcctttgatctaatttgagtcaaactt |
1615886 |
T |
|
| Q |
117 |
tcaaatttgatgtatattgcctat |
140 |
Q |
| |
|
|||||||||||||||||| ||||| |
|
|
| T |
1615885 |
tcaaatttgatgtatatttcctat |
1615862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 6 - 144
Target Start/End: Original strand, 24454555 - 24454693
Alignment:
| Q |
6 |
attgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaatct |
105 |
Q |
| |
|
|||||||| ||||||||||||| ||| ||| ||||| ||||| | ||||||||||||||||||||||| | | ||||||||||||||||||||||| |
|
|
| T |
24454555 |
attgcaaatcctaaacctaaattttttaggcgccaaa-caaggagggccgttggatctcatcatttggcttgacattcatctcatcctttgatctaatct |
24454653 |
T |
|
| Q |
106 |
ga-gtcaaattttcaaatttgatgtatattgcctatgcac |
144 |
Q |
| |
|
|| ||||| ||||||||||||||| | || ||||||||| |
|
|
| T |
24454654 |
gacttcaaactttcaaatttgatgtctttttcctatgcac |
24454693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 582; Significance: 0; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 582; E-Value: 0
Query Start/End: Original strand, 1 - 650
Target Start/End: Complemental strand, 43071468 - 43070819
Alignment:
| Q |
1 |
atgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatct |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
43071468 |
atgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttggctaagcatgcatctcatcctttgatct |
43071369 |
T |
|
| Q |
101 |
aatctgagtcaaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacactt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43071368 |
aatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacactt |
43071269 |
T |
|
| Q |
201 |
atcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactcaaaa |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
43071268 |
atcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgcttttactcaaaa |
43071169 |
T |
|
| Q |
301 |
aattcccttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttgccgctctctctgtcgccgcagctctct |
400 |
Q |
| |
|
|| || ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
43071168 |
aaatctcttcgccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctctgccgttgccgctctctccgtcgccgcagctctct |
43071069 |
T |
|
| Q |
401 |
cctgtcgtcgcccttcaccaatgctctcgattctgacttcaccttcgacgttgtcgtctgcggcatcgtattagccaggtgtgttgaagatgctactata |
500 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
43071068 |
cctgtcgtcgcccttcaccaatgctctcgattccgacatcaccttcgccgttgtcgtctgcggcatcgtatcagccaggtgtgttgaagatgctactata |
43070969 |
T |
|
| Q |
501 |
tatatcctaaatcgttgttcttgtaacttttccctaactttgttattccattatatttttggtttgtttgtaagtgaattgatgatatttaaatagattt |
600 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43070968 |
tatatcctaaatcgttgttcctgtaacttttccctaactttgttattccattacatttttggtttgtttgtaagtgaattgatgatatttaaatagattt |
43070869 |
T |
|
| Q |
601 |
taccatcatgtattatgctattaataaattgattgatactttaaaatcat |
650 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
43070868 |
taccatcatgtattatgctcttaataaattgattgatactttaaaatcat |
43070819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 7 - 478
Target Start/End: Original strand, 1262129 - 1262601
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaatctg |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
1262129 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggaagccgttggatctcatcatttggctaagcatgcatctcatcctttgatctaatctg |
1262228 |
T |
|
| Q |
107 |
agtcaaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacacttatcgat |
206 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1262229 |
agtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacacttatcgat |
1262328 |
T |
|
| Q |
207 |
gtccacctctttctccttca-tttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactcaaaaaattc |
305 |
Q |
| |
|
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||| ||||| || |
|
|
| T |
1262329 |
gttcacctctttctccttcattttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcatattgcttttactcgaaaaaatc |
1262428 |
T |
|
| Q |
306 |
ccttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttgccgctctctctgtcgccgcagctctctcctgt |
405 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
1262429 |
tcttcgccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctctgccgttgccgctttctccgtcgccgcagctctctcctgt |
1262528 |
T |
|
| Q |
406 |
cgtcgcccttcaccaatgctctcgattctgacttcaccttcgacgttgtcgtctgcggcatcgtattagccag |
478 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||||||||||| |||||| |
|
|
| T |
1262529 |
cgtcgcccttcaccaatgctctcgattccgacatcaccttcgccgttgtcgtatgcggcatcgtatcagccag |
1262601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 15 - 302
Target Start/End: Complemental strand, 48849879 - 48849591
Alignment:
| Q |
15 |
cctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaatctgagtcaaat |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
48849879 |
cctaaacctaaatggttttggctccaaaacaagggattttgttggatctcatcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaac |
48849780 |
T |
|
| Q |
115 |
tttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacacttatcgatgtccacct |
214 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
48849779 |
tttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatcctcaaattcccaaattgactccacacttatcgatgttcacct |
48849680 |
T |
|
| Q |
215 |
ctttctccttcat-ttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactcaaaaaa |
302 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
48849679 |
ctttctccttcattttttaagttctcttctctcatctcccattattccttctttatgtgttggaattcagattgcttttactcaaaaaa |
48849591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 7 - 265
Target Start/End: Complemental strand, 26910061 - 26909806
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaatctg |
106 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
26910061 |
ttgcaaaccctaaacctaaatggatttggctccaaaacaagggagaccattggatcttatcatttggctaagcatgcatctcatcctttgatctaatctg |
26909962 |
T |
|
| Q |
107 |
agtcaaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacacttatcgat |
206 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||| || |
|
|
| T |
26909961 |
agtcaaactttcaaatttgatgtatatttcctatgcacttattcaagttttgactc----attatcctccaattcccagattgactccacacttatccat |
26909866 |
T |
|
| Q |
207 |
gtccacctctttctccttcatttttaa-gttctcttctctcctctcccattattccttct |
265 |
Q |
| |
|
| |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
26909865 |
gcccacctttttctccttcatttttaacgttctcttttctcctctcccattattccttct |
26909806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 284 - 478
Target Start/End: Complemental strand, 48849585 - 48849391
Alignment:
| Q |
284 |
attgttttaactcaaaaaattcccttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttgccgctctctc |
383 |
Q |
| |
|
|||| ||| |||||||||| || ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
48849585 |
attgcttttactcaaaaaaatctcttcgccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctctgccgttgccgctttctc |
48849486 |
T |
|
| Q |
384 |
tgtcgccgcagctctctcctgtcgtcgcccttcaccaatgctctcgattctgacttcaccttcgacgttgtcgtctgcggcatcgtattagccag |
478 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
48849485 |
cgtcgccgcagctctctcctttcgtcgcccttcaccaatgctctcgattccgacatcaccttcgccgttgtcgtctgcggcatcgtatcagccag |
48849391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 558; Significance: 0; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 558; E-Value: 0
Query Start/End: Original strand, 1 - 650
Target Start/End: Original strand, 9043837 - 9044486
Alignment:
| Q |
1 |
atgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatct |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
9043837 |
atgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttggctaagcatgcatctcatcctttgatct |
9043936 |
T |
|
| Q |
101 |
aatctgagtcaaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacactt |
200 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9043937 |
aatctgagtcaaatttttaaatttgatgtatatttcctatgcatttatccaagttttgactcattaattatcctccaattcccaaattgactccacactt |
9044036 |
T |
|
| Q |
201 |
atcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactcaaaa |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
9044037 |
atcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgcttttactcaaaa |
9044136 |
T |
|
| Q |
301 |
aattcccttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttgccgctctctctgtcgccgcagctctct |
400 |
Q |
| |
|
|| | ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
9044137 |
aaatttcttcgccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctctgccgttgccgctctctccgtcgccgcagctctct |
9044236 |
T |
|
| Q |
401 |
cctgtcgtcgcccttcaccaatgctctcgattctgacttcaccttcgacgttgtcgtctgcggcatcgtattagccaggtgtgttgaagatgctactata |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
9044237 |
cctgtcgtcgcccttcaccaatgctctcgatttcgacatcaccttcgtcgttgtcgtctgcagcatcgtatcagccaagtgtgttgaagatgctactata |
9044336 |
T |
|
| Q |
501 |
tatatcctaaatcgttgttcttgtaacttttccctaactttgttattccattatatttttggtttgtttgtaagtgaattgatgatatttaaatagattt |
600 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9044337 |
tatatcctaaatcgttgttcctgtaacttttccctaactttgttattccattacatttttggtttgtttgtaagtgaattgatgatatttaaatagattt |
9044436 |
T |
|
| Q |
601 |
taccatcatgtattatgctattaataaattgattgatactttaaaatcat |
650 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
9044437 |
taccatcatgtattatgctgttaataaattgattgatactttaaaatcat |
9044486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 557; E-Value: 0
Query Start/End: Original strand, 1 - 690
Target Start/End: Complemental strand, 7473575 - 7472880
Alignment:
| Q |
1 |
atgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatct |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
7473575 |
atgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttagctaagcatgcatctcatcctttgatct |
7473476 |
T |
|
| Q |
101 |
aatctgagtcaaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacactt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
7473475 |
aatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattagttatcctccaattcccaaattgactccacactt |
7473376 |
T |
|
| Q |
201 |
atcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactcaaaa |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| |
|
|
| T |
7473375 |
atcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaatttagattgcttttactcaaaa |
7473276 |
T |
|
| Q |
301 |
aattcccttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttgccgctctctctgtcgccgcagctctct |
400 |
Q |
| |
|
|| || ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
7473275 |
aaatctcttcgccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctctgccgttgtcgctctctccgtcgccgcagctctct |
7473176 |
T |
|
| Q |
401 |
cctgtcgtcgcccttcaccaatgctctcgattctgacttcaccttcgacgttgtcgtctgcggcatcgtattagccaggtgtgttgaagatgctactata |
500 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
7473175 |
cctgtcgtcgcccttcaccaatgctctcgattccgacatcaccttcgccgttgtcgtctgcggcatcgtatcagccaggtgtgttgaagatgctactata |
7473076 |
T |
|
| Q |
501 |
t----atatcctaaatcgttgttcttgtaacttttccctaactttgttattccattatatttttggtttgtttgtaagtgaattgatgatatttaaatag |
596 |
Q |
| |
|
| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7473075 |
tatatatatcctaaatcgttgttcctgtaacttttccctaactttgttattccattacatttttggtttgtttgtaagtgaattgatgatatttaaatag |
7472976 |
T |
|
| Q |
597 |
attttaccatcatgtattatgctattaataaattgattgatactttaaaatc--atgtgtannnnnnnnncaaacacaccaatatgtccattgatg |
690 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
7472975 |
attttaccatcatgtattatgctgttaataaattgattgatactttaaaatcatatgtgtatttttttttcaaacacaccaatatgtccattgatg |
7472880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 535; E-Value: 0
Query Start/End: Original strand, 1 - 650
Target Start/End: Complemental strand, 30442633 - 30441983
Alignment:
| Q |
1 |
atgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatct |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
30442633 |
atgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttggctaagcatgcatctcatcctttgatct |
30442534 |
T |
|
| Q |
101 |
aatctgagtcaaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacactt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30442533 |
aatctgagtcaaattttcaaatttgatgtatatttcctatgcacttttccaagttttgactcattaattatcctccaattcccaaattgactccacactt |
30442434 |
T |
|
| Q |
201 |
atcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactcaaaa |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
30442433 |
atcgatgtccacctctttctccttcattttaaagttctcttctctccactctcattattccttctttatgtgttggaattcagattgcttttactcaaaa |
30442334 |
T |
|
| Q |
301 |
aat-tcccttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttgccgctctctctgtcgccgcagctctc |
399 |
Q |
| |
|
|| || ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||| || |||||||||||| |
|
|
| T |
30442333 |
aaaatctcttcgccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctctgtcgttgccgctctctccgttgccgcagctctc |
30442234 |
T |
|
| Q |
400 |
tcctgtcgtcgcccttcaccaatgctctcgattctgacttcaccttcgacgttgtcgtctgcggcatcgtattagccaggtgtgttgaagatgctactat |
499 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||| ||||||| | ||||||||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
30442233 |
tcctgtcgtcgcccttcaccaatgctctcgattccgacatcaccttggccgttgtcgtctgcggcatcgtatcagccatatgtgttgaagatgctactat |
30442134 |
T |
|
| Q |
500 |
atatatcctaaatcgttgttcttgtaacttttccctaactttgttattccattatatttttggtttgtttgtaagtgaattgatgatatttaaatagatt |
599 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30442133 |
atatatcctaaatcgttgttcctgtaacttttccctaactttgttattccattacatttttggtttgtttgtaagtgaattgatgatatttaaatagatt |
30442034 |
T |
|
| Q |
600 |
ttaccatcatgtattatgctattaataaattgattgatactttaaaatcat |
650 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
30442033 |
ttaccatcatgtattatgttgttaataaattgattgatactttaaaatcat |
30441983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 165; E-Value: 8e-88
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 22009614 - 22009359
Alignment:
| Q |
1 |
atgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatct |
100 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
22009614 |
atgaatttgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttggctaagcatgcatctcatcctttgatct |
22009515 |
T |
|
| Q |
101 |
aatctgagtcaaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacactt |
200 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
22009514 |
aatctgagtcaaactttcaaatttgatgtatatttcctatgctcttatccaagttttga-------------ctccaattcccaaattgactccacactt |
22009428 |
T |
|
| Q |
201 |
atcgatgtccacctctttctccttcatttttaa-gttctcttctctcctctcccattattccttcttta |
268 |
Q |
| |
|
||||||| | |||| |||||||||| |||| || |||| ||||||||||||||||||||||||||||| |
|
|
| T |
22009427 |
atcgatgccaacctttttctccttccttttcaactttctgttctctcctctcccattattccttcttta |
22009359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 26841044 - 26840988
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatct |
63 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26841044 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatct |
26840988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 19085241 - 19085180
Alignment:
| Q |
171 |
tcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcattttta |
232 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
19085241 |
tcctccaattcccatattgactccacacttatcgatacccacctctttctcctccattttta |
19085180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 22004536 - 22004441
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaat |
103 |
Q |
| |
|
|||||||||||||||||| || |||| ||| |||| ||||| | ||||||||||||||||||||||| ||| | ||| ||||||||||||||||| |
|
|
| T |
22004536 |
ttgcaaaccctaaacctagatagtttaggcgccaat-caaggtggtccgttggatctcatcatttggctcagcattcatatcatcctttgatctaat |
22004441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 534 - 616
Target Start/End: Original strand, 40163917 - 40163996
Alignment:
| Q |
534 |
ctaactttgttattccattatatttttggtttgtttgtaagtgaattgatgatatttaaatagattttaccatcatgtattat |
616 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||| | |||||| ||||||||| ||||||||||| || ||||||||| |
|
|
| T |
40163917 |
ctaactttgttattccattatatatttagtttgtttggatgtgaat---tgatatttacatagattttacaattatgtattat |
40163996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 19085457 - 19085422
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaa |
42 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
19085457 |
ttgcaaaccctaaacctaaatggttttggctccaaa |
19085422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 558; Significance: 0; HSPs: 14)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 558; E-Value: 0
Query Start/End: Original strand, 1 - 654
Target Start/End: Complemental strand, 19882197 - 19881544
Alignment:
| Q |
1 |
atgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatct |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
19882197 |
atgaaattgtaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcatgcatctcatcctttgatct |
19882098 |
T |
|
| Q |
101 |
aatctgagtcaaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacactt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
19882097 |
aatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaaattttgactcattaattatcctccaattcccaaattgactccacattt |
19881998 |
T |
|
| Q |
201 |
atcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactcaaaa |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
19881997 |
atcgatgtccacctctttctccttcatttttaagttatcttctctcctctcccattattccttctttatgtgttggaattcagattgcttttactcaaaa |
19881898 |
T |
|
| Q |
301 |
aattcccttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttgccgctctctctgtcgccgcagctctct |
400 |
Q |
| |
|
|| || ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||| |||||||||||| |
|
|
| T |
19881897 |
aaatctcttcgccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctctgtcgttgccgctctctccgtcaccgcagctctct |
19881798 |
T |
|
| Q |
401 |
cctgtcgtcgcccttcaccaatgctctcgattctgacttcaccttcgacgttgtcgtctgcggcatcgtattagccaggtgtgttgaagatgctactata |
500 |
Q |
| |
|
|||||| || ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
19881797 |
cctgtcctcacccttcaccaatgctctcgattccgacatcaccttcgccgttgtcgtctgcggcatcgtatcagccaggtgtgttgaagatgctactata |
19881698 |
T |
|
| Q |
501 |
tatatcctaaatcgttgttcttgtaacttttccctaactttgttattccattatatttttggtttgtttgtaagtgaattgatgatatttaaatagattt |
600 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19881697 |
tatatcctaaatcgttgttcctgtaacttttccctaactttgttattccattacatttttggtttgtttgtaagtgaattgatgatatttaaatagattt |
19881598 |
T |
|
| Q |
601 |
taccatcatgtattatgctattaataaattgattgatactttaaaatcatgtgt |
654 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
19881597 |
taccatcatgtattatgctgttaataaattgattgatactttaaaatcatgtgt |
19881544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 548; E-Value: 0
Query Start/End: Original strand, 1 - 690
Target Start/End: Complemental strand, 53973372 - 53972682
Alignment:
| Q |
1 |
atgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatct |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
53973372 |
atgaaattgcaaaccctaaacctaaatggttttggctccaaatcaagggaggccgttggatctcatcatttggctaagcctgcatctcatcctttgatct |
53973273 |
T |
|
| Q |
101 |
aatctgagtcaaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacactt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
53973272 |
aatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaaattttgactcattaattatcctccaattctcaaattgactccacactt |
53973173 |
T |
|
| Q |
201 |
atcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactcaaaa |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
53973172 |
atcgatgtccacctctttctccttcatttttaagttttcttctctcctctcccattattcattctttatgtgttggaattcagattgcttttactcaaaa |
53973073 |
T |
|
| Q |
301 |
aattcccttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttgccgctctctctgtcgccgcagctctct |
400 |
Q |
| |
|
|| || |||| |||||||||||||||||| |||||||||||||||| |||| ||||||||||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
53973072 |
aaatctcttctccctttgagttgttcatcttccacctcactctcagacatttaaacaaaattctctgtcgttgccgctctctccgtcgccgcagctctct |
53972973 |
T |
|
| Q |
401 |
cctgtcgtcgcccttcaccaatgctctcgattctgacttcaccttcgacgttgtcgtctgcggcatcgtattagccaggtgtgttgaagatgctactata |
500 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| |||| |||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
53972972 |
cctgtcgtcgcccttcaccaatgctctcgattccgacatcactttcgtcgttgtcgtctgcggcatcgtatcagccaagtgtgttgaagatgctactata |
53972873 |
T |
|
| Q |
501 |
tatatcctaaatcgttgttcttgtaacttttccctaactttgttattccattatatttttggtttgtttgtaagtgaattgatgatatttaaatagattt |
600 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53972872 |
tatatcctaaatcgttgttcctgtaacttttccctaactttgttattccattacatttttggtttgtttgtaagtgaattgatgatatttaaatagattt |
53972773 |
T |
|
| Q |
601 |
taccatcatgtattatgctattaataaattgattgatactttaaaatcatgtgta-nnnnnnnnncaaacacaccaatatgtccattgatg |
690 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
53972772 |
taccatcatgtattatgctgttaataaattgattgatactttaaaatcatgtgtattttttttttcaaacacaccaatatgtccattgatg |
53972682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 418; E-Value: 0
Query Start/End: Original strand, 1 - 505
Target Start/End: Original strand, 37982384 - 37982891
Alignment:
| Q |
1 |
atgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatct |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
37982384 |
atgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcatgcatctcatcctttaatct |
37982483 |
T |
|
| Q |
101 |
aatctgagtcaaattttcaaatttgatgtatattgcctatgcac---ttatccaagttttgactcattaattatcctccaattcccaaattgactccaca |
197 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37982484 |
aatctgagtcaaattttcaaatttgatgtatatttcctatgcacgtcttatccaagttttgactcattaattatcctccaattcccaaattgactccaca |
37982583 |
T |
|
| Q |
198 |
cttatcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactca |
297 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| |
|
|
| T |
37982584 |
cttatcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgttttggaattcagattgcttttactca |
37982683 |
T |
|
| Q |
298 |
aaaaattcccttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttgccgctctctctgtcgccgcagctc |
397 |
Q |
| |
|
||||| || ||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
37982684 |
aaaaaatctcttcgccctctgagttgttcatcttccacctcactctcagacattcaaacaaaattctctgtcgttgccgctctctccgtcgccgcagctc |
37982783 |
T |
|
| Q |
398 |
tctcctgtcgtcgcccttcaccaatgctctcgattctgacttcaccttcgacgttgtcgtctgcggcatcgtattagccaggtgtgttgaagatgctact |
497 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| | |
|
|
| T |
37982784 |
tctcctatcgtcgcccttcaccaatgctctcgattccgacatcaccttcgtcgttgtcgtctgcggcatcgtatcagccaggtgtgttgaagatgctaat |
37982883 |
T |
|
| Q |
498 |
atatatat |
505 |
Q |
| |
|
|||||||| |
|
|
| T |
37982884 |
atatatat |
37982891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 7 - 478
Target Start/End: Original strand, 31685118 - 31685575
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaatctg |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
31685118 |
ttgcaaaccctaaacctaaatggttttggctccaaaataagggaggccgttgaatctcatcatttggctaagcatgcatctcatcctttgatctaatctg |
31685217 |
T |
|
| Q |
107 |
agtcaaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacacttatcgat |
206 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
31685218 |
agtcaaactttcaaatttgatgtatatttcctatgcacttattcaagttttgactcattaattatcctccaattctcaaattgactccacacttatcgat |
31685317 |
T |
|
| Q |
207 |
gtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactc-aaaaaattc |
305 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||| ||| |||| |||||| || |
|
|
| T |
31685318 |
gtccacctctttctccttcatttttaagttcttttctctcctcttccattattccttctttatgtgttggaattcaaattgcttttactcaaaaaaaatc |
31685417 |
T |
|
| Q |
306 |
ccttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttgccgctctctctgtcgccgcagctctctcctgt |
405 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| | ||||||| |||||||||||||||||| |
|
|
| T |
31685418 |
tcttcgccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattatatgccgtt---------------gccgcagctctctcctgt |
31685502 |
T |
|
| Q |
406 |
cgtcgcccttcaccaatgctctcgattctgacttcaccttcgacgttgtcgtctgcggcatcgtattagccag |
478 |
Q |
| |
|
|||||||||||||||||| | ||||||| ||| ||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
31685503 |
cgtcgcccttcaccaatgatatcgattccgacatcaccttcgccgttgtcgtctgcggcatcgtatcagccag |
31685575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 497 - 655
Target Start/End: Original strand, 37982939 - 37983097
Alignment:
| Q |
497 |
tatatatatcctaaatcgttgttcttgtaacttttccctaactttgttattccattatatttttggtttgtttgtaagtgaattgatgatatttaaatag |
596 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37982939 |
tatatatatcctaaatcgttgttcctgtaacttttccctaactttgttattccattacatttttggtttgtttgtaagtgaattgatgatatttaaatag |
37983038 |
T |
|
| Q |
597 |
attttaccatcatgtattatgctattaataaattgattgatactttaaaatcatgtgta |
655 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
37983039 |
attttaccatcatgtattatgctgttaataaattgattgatactttaaaatcatgtgta |
37983097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 17681808 - 17681935
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaatc-t |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||| ||||| |||||||||||||||||||||||| | |
|
|
| T |
17681808 |
ttgcaaaccctaaacctaaatggttttggctccaaa-caaggggggccgttggatctcatcatttggttaagcatgcatctcatcctttgatctaatctt |
17681906 |
T |
|
| Q |
106 |
gagtcaaattttcaaatttgatgtatatt |
134 |
Q |
| |
|
|||||||||||| |||||| ||||||||| |
|
|
| T |
17681907 |
gagtcaaatttttaaatttaatgtatatt |
17681935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 2549978 - 2550079
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaatctg |
106 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
2549978 |
ttgcaaaccctaaacctaaatgattttggctccaaaacaagggaggccgttggatct-atcatttggctaagcatgcatctcatcctttgatttaatctg |
2550076 |
T |
|
| Q |
107 |
agt |
109 |
Q |
| |
|
||| |
|
|
| T |
2550077 |
agt |
2550079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 12538715 - 12538620
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaat |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
12538715 |
ttgcaaaccctaaacctaaatggttttggctccaaa-caagggaggccgttggatctcatcatttggctaagcatgcatcacatcctttgatctaat |
12538620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 24761978 - 24761882
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaat |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
24761978 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaatgctgaccgttggatctcatcatttggctcagcatgcatctcatcctttgatctaat |
24761882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 7 - 103
Target Start/End: Original strand, 24815956 - 24816052
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaat |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | | | ||||||||||||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
24815956 |
ttgcaaaccctaaacctaaatggttttggctccaaaacgatgctggccgttggatctcatcatttggctcagcatgcatctcatcctttgatctaat |
24816052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 53027829 - 53027736
Alignment:
| Q |
10 |
caaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaat |
103 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| | | ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
53027829 |
caaaccctaaacctaaatggttttgactccaaaatgatgctgaccgttggatctcatcatttggctcagcatgcatctcatcctttgatctaat |
53027736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 53352841 - 53352745
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaat |
103 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||||| | | ||||||||||||||||||||||||| || ||||||||||||||||||| |||| |
|
|
| T |
53352841 |
ttgcaaactctaaacctaaacggttttggctccaaaacgatgctgaccgttggatctcatcatttggctcagtgtgcatctcatcctttgatttaat |
53352745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 411 - 456
Target Start/End: Original strand, 17682201 - 17682246
Alignment:
| Q |
411 |
cccttcaccaatgctctcgattctgacttcaccttcgacgttgtcg |
456 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||| | |||||||| |
|
|
| T |
17682201 |
cccttcaccaatgctctcgattccgacatcacctttgccgttgtcg |
17682246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 411 - 456
Target Start/End: Original strand, 19766443 - 19766488
Alignment:
| Q |
411 |
cccttcaccaatgctctcgattctgacttcaccttcgacgttgtcg |
456 |
Q |
| |
|
||||||||||||||||| ||||| ||| ||||||||| |||||||| |
|
|
| T |
19766443 |
cccttcaccaatgctctagattccgacatcaccttcgccgttgtcg |
19766488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0596 (Bit Score: 555; Significance: 0; HSPs: 1)
Name: scaffold0596
Description:
Target: scaffold0596; HSP #1
Raw Score: 555; E-Value: 0
Query Start/End: Original strand, 1 - 690
Target Start/End: Original strand, 689 - 1378
Alignment:
| Q |
1 |
atgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatct |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
689 |
atgaaattgcaaaccctaaacctaaatggttttgactccaaaataagggaggccgttggatctcatcatttggctaagcatgcatctcatcctttgatct |
788 |
T |
|
| Q |
101 |
aatctgagtcaaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacactt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
789 |
aatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaaattttgactcattaattatcattcaattcccaaattgactccacactt |
888 |
T |
|
| Q |
201 |
atcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactcaaaa |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| |
|
|
| T |
889 |
atcgatgtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcaaattgcttttactcaaaa |
988 |
T |
|
| Q |
301 |
aattcccttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttgccgctctctctgtcgccgcagctctct |
400 |
Q |
| |
|
|| || |||| |||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
989 |
aaatctcttctccctttgagttgttcatcttccacctcactctcagacatttaaacaaaattctctgccgttgccgctctctccgtcgccgcagctctct |
1088 |
T |
|
| Q |
401 |
cctgtcgtcgcccttcaccaatgctctcgattctgacttcaccttcgacgttgtcgtctgcggcatcgtattagccaggtgtgttgaagatgctactata |
500 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| |||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
1089 |
cctgtcgtcgcccttcaccaatgctctcgattccgacatcactttcgccgttgtcgtctgcggcatcgtatcagccaggtgtgttgaagatgctactata |
1188 |
T |
|
| Q |
501 |
tatatcctaaatcgttgttcttgtaacttttccctaactttgttattccattatatttttggtttgtttgtaagtgaattgatgatatttaaatagattt |
600 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1189 |
tatatcctaaatcgttgttcctgtaacttttccctaactttgttattccattacatttttggtttgtttgtaagtgaattgatgatatttaaatagattt |
1288 |
T |
|
| Q |
601 |
taccatcatgtattatgctattaataaattgattgatactttaaaatcatgtgtannnnnnnnncaaacacaccaatatgtccattgatg |
690 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
1289 |
taccatcatgtattatgctgttaataaattgattgatattttaaaatcatgtgtatttttttttcaaacacaccaatatgtccattgatg |
1378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 365; Significance: 0; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 11 - 479
Target Start/End: Complemental strand, 14678097 - 14677630
Alignment:
| Q |
11 |
aaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaatctgagtc |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
14678097 |
aaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttggctaagcatgcatctcatcctttgatctaatctgagtc |
14677998 |
T |
|
| Q |
111 |
aaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacacttatcgatgtcc |
210 |
Q |
| |
|
||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |
|
|
| T |
14677997 |
aaactttcaaatttaatgtatatttcctatgcacttatccaagttttgactcattaattatcatccaattcccaaattgactccacacttatc-atgtcc |
14677899 |
T |
|
| Q |
211 |
acctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactcaaaaaattcccttc |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||| || ||| |
|
|
| T |
14677898 |
acctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttgaaattcagattgcttttactcaaaaaaatctcttt |
14677799 |
T |
|
| Q |
311 |
gccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttgccgctctctctgtcgccgcagctctctcctgtcgtcg |
410 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
14677798 |
cccctttgagttgttcatcttccacctcactctcagacattcaaacaaaatcctctgccgttgccgctctctccgtcgccgcagctctctcctatcgtca |
14677699 |
T |
|
| Q |
411 |
cccttcaccaatgctctcgattctgacttcaccttcgacgttgtcgtctgcggcatcgtattagccagg |
479 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||| ||||||| |
|
|
| T |
14677698 |
cccttcaccaatgctctcgattccgacatcaccttcgccgttgtcgtctgcagcatcgtatcagccagg |
14677630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 7 - 471
Target Start/End: Complemental strand, 31100952 - 31100488
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaatctg |
106 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||| || ||||||||||||||||||||||| |
|
|
| T |
31100952 |
ttgcaaatcctaaacctaaatggttttggctccaaaacaagggaggccgttcgatctcatcatttggttaagcatgtatctcatcctttgatctaatctg |
31100853 |
T |
|
| Q |
107 |
agtcaaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacacttatcgat |
206 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31100852 |
agtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacacttatcgat |
31100753 |
T |
|
| Q |
207 |
gtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactcaaaaaattcc |
306 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| || |
|
|
| T |
31100752 |
gcccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgcttttactcaaaaaaatct |
31100653 |
T |
|
| Q |
307 |
cttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttgccgctctctctgtcgccgcagctctctcctgtc |
406 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||| ||| ||||||| ||||||||| |||||||||||| |
|
|
| T |
31100652 |
cttccccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctttgccgtcgccactctctccgtcgccgcaactctctcctgtc |
31100553 |
T |
|
| Q |
407 |
gtcgcccttcaccaatgctctcgattctgacttcaccttcgacgttgtcgtctgcggcatcgtat |
471 |
Q |
| |
|
||||||||||||||||||||||||||| || ||||||||| |||||||||||| |||||||||| |
|
|
| T |
31100552 |
gtcgcccttcaccaatgctctcgattccaacatcaccttcgccgttgtcgtctgtggcatcgtat |
31100488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 7 - 471
Target Start/End: Original strand, 5657812 - 5658261
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaatctg |
106 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
5657812 |
ttgcaaaccctaaacctaaatagttttggctccaaaacaagggaggccgttggatctcatcatttggttaagcatgcatctcatcctttgatctaatctg |
5657911 |
T |
|
| Q |
107 |
agtcaaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacacttatcgat |
206 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5657912 |
agtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacacttatcgat |
5658011 |
T |
|
| Q |
207 |
gtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactcaaaaaattcc |
306 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| || |
|
|
| T |
5658012 |
gcccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgcttttactcaaaaaaatct |
5658111 |
T |
|
| Q |
307 |
cttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttgccgctctctctgtcgccgcagctctctcctgtc |
406 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
5658112 |
cttccccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctttgcc---------------gtcgccgcagctctctcctgtc |
5658196 |
T |
|
| Q |
407 |
gtcgcccttcaccaatgctctcgattctgacttcaccttcgacgttgtcgtctgcggcatcgtat |
471 |
Q |
| |
|
||||||||||||||||||||| ||||| || ||||||||| |||||||||||| |||||||||| |
|
|
| T |
5658197 |
gtcgcccttcaccaatgctcttgattccaacatcaccttcgccgttgtcgtctgtggcatcgtat |
5658261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 171 - 407
Target Start/End: Complemental strand, 33689215 - 33688978
Alignment:
| Q |
171 |
tcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaa-gttctcttctctcctctcccattattccttctttat |
269 |
Q |
| |
|
|||||||||| ||| |||||||||||||||||| || |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
33689215 |
tcctccaatttccatattgactccacacttatccatacccacctctttctccttcattgttaacgttctcttctctcctctcccattattccttctttac |
33689116 |
T |
|
| Q |
270 |
gtgttggaattcagattgttttaactcaaaaaattcccttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaa-aattctctgc |
368 |
Q |
| |
|
| ||||||||||||||| ||| |||||||||| || |||| |||||||||||||||||| ||||||||||||| || ||||||||||| | |||||| | |
|
|
| T |
33689115 |
tttttggaattcagattgcttttactcaaaaaaatctcttc-ccctttgagttgttcatcttccacctcactcttagacattcaaacaagacttctctcc |
33689017 |
T |
|
| Q |
369 |
cgttgccgctctctctgtcgccgcagctctctcctgtcg |
407 |
Q |
| |
|
| | ||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
33689016 |
catcgccgctctctccgtcgccgcagctctctcatgtcg |
33688978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 7 - 144
Target Start/End: Complemental strand, 27541638 - 27541502
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaatctg |
106 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
27541638 |
ttgcaaaccctaaacctaaatggctttggctccaaa-caagggacgccgttggatctcatcatttggctaagcatgcatctcatcctttgatctaatctg |
27541540 |
T |
|
| Q |
107 |
agtcaaattttcaaatttgatgtatattgcctatgcac |
144 |
Q |
| |
|
| ||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
27541539 |
aatcaaactttcaaatttgatgtatatttcctatgcac |
27541502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 5662607 - 5662706
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaatctg |
106 |
Q |
| |
|
|||||||||||||||||| || ||| ||| |||| ||||| | ||||| |||||||||||||||||| || | |||||||||||||||| ||||||| |
|
|
| T |
5662607 |
ttgcaaaccctaaacctagattttttaggcgccaat-caaggaggtccgttagatctcatcatttggctaggcattcatctcatcctttgatttaatctg |
5662705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 357; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 7 - 479
Target Start/End: Complemental strand, 29863441 - 29862969
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaatctg |
106 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
29863441 |
ttgcaaaccgtaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttggctgagcatgcatctcatcctttgatctaatctg |
29863342 |
T |
|
| Q |
107 |
agtcaaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacacttatcgat |
206 |
Q |
| |
|
||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29863341 |
agtcaaactttcaaatttgatgtatatttcttatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacacttatcgat |
29863242 |
T |
|
| Q |
207 |
gtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactcaaaaaattcc |
306 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||| || |
|
|
| T |
29863241 |
gtccacctctttctccttcattttttagttctcttatctcctctcccattattccttctttatgtgttagaattcagattgcttttactcaaaaaaatct |
29863142 |
T |
|
| Q |
307 |
cttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttgccgctctctctgtcgccgcagctctctcctgtc |
406 |
Q |
| |
|
||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||| || |||||||||||| |||||||||||||||||||||| |
|
|
| T |
29863141 |
ctttcccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctctgtcgctgccgctctctccgtcgccgcagctctctcctgtc |
29863042 |
T |
|
| Q |
407 |
gtcgcccttcaccaatgctctcgattctgacttcaccttcgacgttgtcgtctgcggcatcgtattagccagg |
479 |
Q |
| |
|
||||||||||||| ||||||||||||| ||| |||| || | ||||||| ||||||||||||||| ||||||| |
|
|
| T |
29863041 |
gtcgcccttcaccgatgctctcgattccgacatcacttttgccgttgtcatctgcggcatcgtatcagccagg |
29862969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035 (Bit Score: 354; Significance: 0; HSPs: 1)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 7 - 479
Target Start/End: Original strand, 35104 - 35574
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaatctg |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
35104 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggaggttgttggatctcatcatttggctaagcatgcatctcatcctttgatctaatctg |
35203 |
T |
|
| Q |
107 |
agtcaaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacacttatcgat |
206 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
35204 |
agtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattaactccacacttatcgat |
35303 |
T |
|
| Q |
207 |
gtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactcaaaaaattcc |
306 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||| || |
|
|
| T |
35304 |
gtccacctttttctccttcatttttaagttctc--ctctcctctcccattattccttctttatgagttggaattcagattgcttttactcaaaaaaatcg |
35401 |
T |
|
| Q |
307 |
cttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttgccgctctctctgtcgccgcagctctctcctgtc |
406 |
Q |
| |
|
|| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
35402 |
ttttcccctttgagttgttcatcttccacctcactctcagacattcaaacaaaattctctgccgttgctgctctctccgtcgccgcagctctctcctgtc |
35501 |
T |
|
| Q |
407 |
gtcgcccttcaccaatgctctcgattctgacttcaccttcgacgttgtcgtctgcggcatcgtattagccagg |
479 |
Q |
| |
|
|||||| || ||| ||||||||||||||||| ||||||||| ||||||||| ||||||||||||| ||||||| |
|
|
| T |
35502 |
gtcgcctttgaccgatgctctcgattctgacatcaccttcgccgttgtcgtttgcggcatcgtatcagccagg |
35574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 341; Significance: 0; HSPs: 1)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 7 - 479
Target Start/End: Complemental strand, 11714 - 11242
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaatctg |
106 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||| ||||||| |
|
|
| T |
11714 |
ttgcaaaccctaaacctaactggttttgactccaaaacaagggaggccgttggatctcatcatttggttaagcatgcatctcatcctttgatttaatctg |
11615 |
T |
|
| Q |
107 |
agtcaaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacacttatcgat |
206 |
Q |
| |
|
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
11614 |
agtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattcattatcctccaattcccaaattgactccacacttattgat |
11515 |
T |
|
| Q |
207 |
gtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactcaaaaaattcc |
306 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| || ||| |
|
|
| T |
11514 |
gcccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgcttttactcaaacaaatcc |
11415 |
T |
|
| Q |
307 |
cttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttgccgctctctctgtcgccgcagctctctcctgtc |
406 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||||| ||| ||||||||||||||||| || || |||||||||| ||||||||||||||||| |||| |
|
|
| T |
11414 |
cttccccctttgagttgttcatcttccacctcactcccagacattcaaacaaaattctttgttgtcaccgctctctccgtcgccgcagctctctcttgtc |
11315 |
T |
|
| Q |
407 |
gtcgcccttcaccaatgctctcgattctgacttcaccttcgacgttgtcgtctgcggcatcgtattagccagg |
479 |
Q |
| |
|
|||||||||||||||||||||||| || ||| ||||||||| |||||||||||||||||| | || ||||||| |
|
|
| T |
11314 |
gtcgcccttcaccaatgctctcgaatccgacatcaccttcgccgttgtcgtctgcggcattgcatcagccagg |
11242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 331; Significance: 0; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 7 - 471
Target Start/End: Complemental strand, 33045511 - 33045062
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaatctg |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
33045511 |
ttgcaaaccctaaacctaaatggttttggctccaaaataagggaggccgttggatctcatcatttggttaagcatgcatctcatcctttgatctaatctg |
33045412 |
T |
|
| Q |
107 |
agtcaaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacacttatcgat |
206 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33045411 |
agtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacacttatcgat |
33045312 |
T |
|
| Q |
207 |
gtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactcaaaaaattcc |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| || |
|
|
| T |
33045311 |
gtccacctctttctccttcatttttaagttctcttgtctcctctcccattattccttctttatgtgttggaattcagattgcttttactcaaaaaaatct |
33045212 |
T |
|
| Q |
307 |
cttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttgccgctctctctgtcgccgcagctctctcctgtc |
406 |
Q |
| |
|
|||| |||||||||||||||||| || ||||||||||||| ||||||||||||||||| || | |||||||||||||||||||||| |
|
|
| T |
33045211 |
cttccccctttgagttgttcatcttcaacctcactctcagacattcaaacaaaattctttgtc---------------gtcgccgcagctctctcctgtc |
33045127 |
T |
|
| Q |
407 |
gtcgcccttcaccaatgctctcgattctgacttcaccttcgacgttgtcgtctgcggcatcgtat |
471 |
Q |
| |
|
||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||| |
|
|
| T |
33045126 |
gtcgcccttcaccaatgctctcgattccaacatcaccttcgtcgttgtcgtctgcggcatcgtat |
33045062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 7 - 479
Target Start/End: Original strand, 10092553 - 10092985
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaatctg |
106 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
10092553 |
ttgcaaaccctaaatctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttggctaagcatgcatctcattcttt----------- |
10092641 |
T |
|
| Q |
107 |
agtcaaattttcaaatttgatgtatattgcctatgcacttatccaagttttgactcattaattatcctccaattcccaaattgactccacacttatcgat |
206 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||||| |||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10092642 |
---caaactttcaaatttgatgtatatttcctatgcacctatccaagttttgattcattagttatcctccaatttccaaattgactccacacttatcgat |
10092738 |
T |
|
| Q |
207 |
gtccacctctttctccttcatttttaagttctcttctctcctctcccattattccttctttatgtgttggaattcagattgttttaactcaaaaaattcc |
306 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||| || |
|
|
| T |
10092739 |
gtccacctctttctccttcatttttaag-----ttctctcctctcccattattccttctttatgtgttggaattcaaattgcttttactcaaaaaaatct |
10092833 |
T |
|
| Q |
307 |
cttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttgccgctctctctgtcgccgcagctctctcctgtc |
406 |
Q |
| |
|
||| |||||| ||||||||||| |||||||||||||||| ||||||||||||||||||| ||| |||||||||| ||||| |
|
|
| T |
10092834 |
ctt--ccctttaagttgttcatcttccacctcactctcagacattcaaacaaaattctctaacgtcgccgctctct-------------------ctgtc |
10092912 |
T |
|
| Q |
407 |
gtcgcccttcaccaatgctctcgattctgacttcaccttcgacgttgtcgtctgcggcatcgtattagccagg |
479 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
10092913 |
gtcgcccttcaccaatgctctcgattccgacatcaccttcgtcgttgtcgtctgcggcatcgtatcagccagg |
10092985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 274 - 412
Target Start/End: Complemental strand, 22001126 - 22000988
Alignment:
| Q |
274 |
tggaattcagattgttttaactcaaaaaattcccttcgccctttgagttgttcatcctccacctcactctcagtcattcaaacaaaattctctgccgttg |
373 |
Q |
| |
|
||||||| | |||| ||| |||||||||| || |||| |||||||||||||||||| ||||||||||| |||| |||||||||||||||||||| ||||| |
|
|
| T |
22001126 |
tggaatttatattgcttttactcaaaaaaatctcttccccctttgagttgttcatcttccacctcactttcagacattcaaacaaaattctctgtcgttg |
22001027 |
T |
|
| Q |
374 |
ccgctctctctgtcgccgcagctctctcctgtcgtcgcc |
412 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
22001026 |
ccgctctctccgtcgccgcagctctctcctgtcgtcgcc |
22000988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 8976448 - 8976545
Alignment:
| Q |
10 |
caaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaatctga |
107 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||| | ||||||||||||||||||||||||||| |
|
|
| T |
8976448 |
caaactctaaacctaaatggttttggctccaaaataagggagaccgttggatctcattatttagctaaacatgcatctcatcctttgatctaatctga |
8976545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 3065739 - 3065809
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaag |
78 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
3065739 |
ttgcaaaccctaaacctaaatggttttggctccaaa-caagggagaccgttggatctcatcatttggctaag |
3065809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 30908233 - 30908172
Alignment:
| Q |
171 |
tcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcattttta |
232 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
30908233 |
tcctccaattctcatattgactccacacttatcgatacccacctctttctcctccattttta |
30908172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 16246743 - 16246778
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaa |
42 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |
|
|
| T |
16246743 |
ttgcaaaccctaatcctaaatggttttggctccaaa |
16246778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 30908449 - 30908414
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaa |
42 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| |
|
|
| T |
30908449 |
ttgcaaaccctaaatctaaatggttttggctccaaa |
30908414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0096 (Bit Score: 81; Significance: 1e-37; HSPs: 1)
Name: scaffold0096
Description:
Target: scaffold0096; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 7 - 103
Target Start/End: Original strand, 27451 - 27546
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttggctaagcgtgcatctcatcctttgatctaat |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
27451 |
ttgcaaaccctaaacctaaatggttttggctccaaa-caagggaggccgttggatctcatcatttggctaagcatgcatctcatcctttgatctaat |
27546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 50991164 - 50991224
Alignment:
| Q |
171 |
tcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcattttta |
232 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |||||||| |
|
|
| T |
50991164 |
tcctccaattcccatattgactccacacttttcgat-accacctctttctcctccattttta |
50991224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 50990948 - 50990983
Alignment:
| Q |
7 |
ttgcaaaccctaaacctaaatggttttggctccaaa |
42 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
50990948 |
ttgcaaaccctaaacctaaatggttttggctccaaa |
50990983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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