View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0814_low_20 (Length: 381)
Name: NF0814_low_20
Description: NF0814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0814_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 99 - 368
Target Start/End: Complemental strand, 10221479 - 10221220
Alignment:
| Q |
99 |
aataaaattggtgtgcattctttgagtcgtgtcttgcacacattgttatttctatattctttactttgatcatctttgtccccacaaatacttggtttac |
198 |
Q |
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| T |
10221479 |
aataaaattggtgtgcattctttgagtcgtgtcttgcacacattgttatgtctatattctttactttgatcatctttgtccccacaaatact-------- |
10221388 |
T |
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| Q |
199 |
ctatttgttgcatcatgtattgtctcaagaattggtcctacaaaattgtattaaatcaacttccaatgattttactctaacaggtggaaccagctgttga |
298 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10221387 |
--atttgttgcatcatgtattgtctcaagaattggtcctacaaaattgtattaaatcaacttccaatgattttactctaacaggtggaaccagctgttga |
10221290 |
T |
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| Q |
299 |
ggtctaccatgacaaggaatatagatcaaagatatggaaattcccctctcacaacttcacactctcagta |
368 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10221289 |
ggtctaccatgacaaggaatatagatcaaagatatggaaattcccctctcacaacttcacactctcagta |
10221220 |
T |
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