View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0814_low_41 (Length: 293)
Name: NF0814_low_41
Description: NF0814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0814_low_41 |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 40514985 - 40515252
Alignment:
| Q |
5 |
tgtcgaagaatataatgaaagaaagcttactttgcccactctaactctaacaccgtgtttaacgatttccaatttttatatcataatcacagcttcattt |
104 |
Q |
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| T |
40514985 |
tgtccaagaagataatgaaagaaagcttactttgcccactctaactctaac--cgtgtttaacgatttccaatttttatatcataatcacagcttcattt |
40515082 |
T |
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| Q |
105 |
tgttcatcagtacttgggtcaaactgcctgttggaggtgtacttcctcagttttaattt----------aacattgattaagaacgcggtaaagttgtta |
194 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
40515083 |
tgttcatcagtacttgggtcaaactgcctgttggaggtgtacttcctcagttttaatttaacatttttaaacattgattaagaacgcggtaaagttgtta |
40515182 |
T |
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| Q |
195 |
caaataaatacatcacttttagtaaactgattttatgaattatatttgatgtattttcttctattattat |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40515183 |
caaataaatacatcacttttagtaaactgattttatgaattatatttgatgtattttcttctattattat |
40515252 |
T |
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