View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0814_low_57 (Length: 251)

Name: NF0814_low_57
Description: NF0814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0814_low_57
NF0814_low_57
[»] chr8 (46 HSPs)
chr8 (35-215)||(3794754-3794934)
chr8 (69-163)||(3734733-3734827)
chr8 (69-163)||(34237765-34237859)
chr8 (73-199)||(34694650-34694776)
chr8 (81-199)||(41070770-41070888)
chr8 (69-185)||(26168936-26169052)
chr8 (70-163)||(4718643-4718736)
chr8 (70-163)||(28193472-28193565)
chr8 (70-163)||(39349254-39349347)
chr8 (70-186)||(3403589-3403705)
chr8 (73-163)||(27746445-27746535)
chr8 (71-160)||(19471608-19471697)
chr8 (71-160)||(19542532-19542621)
chr8 (71-160)||(19590075-19590164)
chr8 (70-162)||(20305906-20305998)
chr8 (70-162)||(21092539-21092631)
chr8 (70-161)||(2618184-2618275)
chr8 (92-199)||(34639281-34639387)
chr8 (93-163)||(14632975-14633045)
chr8 (70-163)||(18532105-18532198)
chr8 (70-163)||(42643228-42643321)
chr8 (70-185)||(32879277-32879393)
chr8 (72-163)||(28964033-28964124)
chr8 (73-179)||(8387538-8387644)
chr8 (73-163)||(15259516-15259606)
chr8 (117-183)||(36094729-36094795)
chr8 (82-178)||(11714914-11715010)
chr8 (87-163)||(21603245-21603321)
chr8 (116-199)||(13749099-13749182)
chr8 (92-163)||(18128533-18128604)
chr8 (92-199)||(22200634-22200741)
chr8 (82-163)||(264509-264590)
chr8 (82-163)||(651331-651412)
chr8 (82-163)||(837066-837147)
chr8 (81-162)||(8765637-8765718)
chr8 (71-163)||(42328004-42328095)
chr8 (93-163)||(4698833-4698903)
chr8 (69-140)||(5202223-5202294)
chr8 (73-140)||(8042655-8042722)
chr8 (103-174)||(15974936-15975006)
chr8 (94-161)||(16317636-16317703)
chr8 (121-163)||(6953117-6953159)
chr8 (70-160)||(7558056-7558146)
chr8 (103-160)||(12312877-12312934)
chr8 (95-160)||(20469940-20470005)
chr8 (94-146)||(28474270-28474322)
[»] chr4 (41 HSPs)
chr4 (70-186)||(41621683-41621799)
chr4 (69-163)||(25852207-25852301)
chr4 (71-179)||(13873388-13873497)
chr4 (70-163)||(40058962-40059055)
chr4 (70-163)||(32986191-32986284)
chr4 (74-163)||(34835527-34835616)
chr4 (70-163)||(54127452-54127545)
chr4 (68-163)||(27528905-27529000)
chr4 (70-161)||(52983613-52983704)
chr4 (89-178)||(13017742-13017831)
chr4 (70-163)||(13771593-13771686)
chr4 (70-163)||(22625180-22625273)
chr4 (70-163)||(33696389-33696482)
chr4 (87-163)||(2351024-2351100)
chr4 (93-163)||(7392073-7392143)
chr4 (70-163)||(46714386-46714480)
chr4 (70-163)||(33992620-33992713)
chr4 (70-163)||(34844868-34844961)
chr4 (70-163)||(35674851-35674944)
chr4 (70-162)||(1985830-1985922)
chr4 (73-163)||(20566346-20566437)
chr4 (81-160)||(51535618-51535697)
chr4 (70-162)||(42508493-42508585)
chr4 (92-163)||(49287874-49287945)
chr4 (71-161)||(19220528-19220618)
chr4 (95-160)||(38869794-38869860)
chr4 (73-162)||(13584365-13584454)
chr4 (70-163)||(19660642-19660735)
chr4 (94-163)||(20078094-20078163)
chr4 (127-182)||(22630277-22630332)
chr4 (116-163)||(38740890-38740937)
chr4 (74-149)||(42245744-42245819)
chr4 (94-157)||(56409976-56410039)
chr4 (103-161)||(12500170-12500228)
chr4 (81-163)||(35229173-35229254)
chr4 (88-158)||(43352439-43352509)
chr4 (94-139)||(21344842-21344887)
chr4 (116-161)||(37455617-37455661)
chr4 (70-163)||(40307536-40307628)
chr4 (95-160)||(44343533-44343598)
chr4 (75-179)||(9646310-9646414)
[»] chr2 (44 HSPs)
chr2 (71-199)||(8192425-8192553)
chr2 (81-186)||(4618772-4618877)
chr2 (93-190)||(29698164-29698261)
chr2 (70-162)||(33827684-33827776)
chr2 (82-196)||(3405229-3405343)
chr2 (70-163)||(15037953-15038046)
chr2 (70-163)||(18976536-18976628)
chr2 (70-163)||(25293160-25293253)
chr2 (70-163)||(44946163-44946256)
chr2 (74-161)||(4852556-4852643)
chr2 (92-163)||(10582100-10582171)
chr2 (93-180)||(19525489-19525576)
chr2 (81-179)||(19605939-19606037)
chr2 (93-185)||(43374412-43374505)
chr2 (74-160)||(44976267-44976353)
chr2 (74-163)||(17324764-17324853)
chr2 (70-163)||(32845085-32845178)
chr2 (70-163)||(41313986-41314079)
chr2 (95-179)||(28194227-28194311)
chr2 (73-163)||(4567547-4567637)
chr2 (70-160)||(11941323-11941413)
chr2 (93-163)||(36242422-36242492)
chr2 (81-179)||(40591188-40591286)
chr2 (74-162)||(918808-918898)
chr2 (93-162)||(5394034-5394103)
chr2 (70-163)||(30466940-30467033)
chr2 (70-147)||(32526211-32526288)
chr2 (87-163)||(27290599-27290675)
chr2 (99-190)||(36179899-36179990)
chr2 (69-163)||(36390678-36390770)
chr2 (71-161)||(14946774-14946864)
chr2 (93-159)||(38341754-38341820)
chr2 (70-163)||(24195998-24196091)
chr2 (69-153)||(27269470-27269554)
chr2 (71-163)||(40997460-40997552)
chr2 (93-161)||(45271401-45271469)
chr2 (103-186)||(18708504-18708587)
chr2 (93-163)||(1191530-1191600)
chr2 (94-159)||(12517738-12517804)
chr2 (93-159)||(13266507-13266573)
chr2 (70-123)||(6714431-6714484)
chr2 (75-128)||(38784324-38784377)
chr2 (75-160)||(41329842-41329927)
chr2 (85-133)||(5861272-5861320)
[»] chr1 (50 HSPs)
chr1 (70-185)||(32729539-32729654)
chr1 (70-163)||(4621347-4621440)
chr1 (70-163)||(7946838-7946931)
chr1 (70-163)||(24674387-24674480)
chr1 (70-163)||(46607804-46607897)
chr1 (71-163)||(24216973-24217065)
chr1 (70-163)||(7197356-7197449)
chr1 (70-163)||(8077641-8077734)
chr1 (82-179)||(25237083-25237180)
chr1 (70-163)||(30677170-30677263)
chr1 (70-186)||(1138573-1138689)
chr1 (71-162)||(1486415-1486504)
chr1 (70-163)||(15059512-15059605)
chr1 (94-163)||(45859153-45859222)
chr1 (70-185)||(168195-168311)
chr1 (70-162)||(21726723-21726815)
chr1 (70-162)||(29057448-29057540)
chr1 (70-160)||(34778336-34778426)
chr1 (70-163)||(7766837-7766930)
chr1 (70-163)||(20487300-20487393)
chr1 (74-163)||(24122021-24122110)
chr1 (70-163)||(27454976-27455069)
chr1 (75-163)||(46113512-46113600)
chr1 (87-185)||(7578420-7578519)
chr1 (68-163)||(23232375-23232470)
chr1 (82-177)||(25496584-25496679)
chr1 (70-163)||(1378892-1378985)
chr1 (70-163)||(18646847-18646940)
chr1 (94-163)||(39964530-39964599)
chr1 (92-163)||(37351571-37351642)
chr1 (92-186)||(19034473-19034567)
chr1 (93-163)||(33905620-33905690)
chr1 (95-163)||(9500465-9500533)
chr1 (93-186)||(16539625-16539718)
chr1 (93-160)||(4471033-4471101)
chr1 (70-162)||(14258538-14258630)
chr1 (130-186)||(16899557-16899613)
chr1 (103-163)||(36155998-36156058)
chr1 (70-134)||(36987558-36987621)
chr1 (92-163)||(17935785-17935856)
chr1 (70-163)||(2537698-2537785)
chr1 (68-138)||(26608174-26608243)
chr1 (70-160)||(34965323-34965413)
chr1 (94-196)||(37047010-37047112)
chr1 (70-160)||(40802180-40802270)
chr1 (74-163)||(1378743-1378832)
chr1 (74-182)||(2272342-2272451)
chr1 (94-163)||(23734134-23734203)
chr1 (94-163)||(23741326-23741395)
chr1 (94-134)||(39714789-39714829)
[»] scaffold0576 (1 HSPs)
scaffold0576 (69-163)||(5192-5286)
[»] scaffold0026 (1 HSPs)
scaffold0026 (69-163)||(97476-97570)
[»] chr7 (48 HSPs)
chr7 (69-163)||(2751268-2751362)
chr7 (70-163)||(11997847-11997940)
chr7 (69-163)||(7175972-7176066)
chr7 (71-161)||(7799944-7800034)
chr7 (70-163)||(7275275-7275368)
chr7 (70-163)||(40543020-40543113)
chr7 (69-163)||(21217943-21218037)
chr7 (73-162)||(12211646-12211735)
chr7 (74-163)||(22119890-22119979)
chr7 (71-163)||(2103054-2103146)
chr7 (68-172)||(28646965-28647069)
chr7 (71-186)||(23330826-23330941)
chr7 (81-163)||(21835160-21835242)
chr7 (73-186)||(8435782-8435895)
chr7 (70-163)||(10091186-10091279)
chr7 (70-163)||(18044105-18044198)
chr7 (70-163)||(27009357-27009450)
chr7 (87-163)||(22299864-22299940)
chr7 (70-162)||(27312150-27312242)
chr7 (71-162)||(19421230-19421321)
chr7 (70-161)||(43785411-43785502)
chr7 (70-160)||(2344297-2344387)
chr7 (81-163)||(22696329-22696411)
chr7 (92-185)||(22703506-22703600)
chr7 (74-163)||(13332533-13332622)
chr7 (70-163)||(17197060-17197153)
chr7 (70-163)||(17212051-17212144)
chr7 (71-186)||(21574189-21574305)
chr7 (70-162)||(42913624-42913716)
chr7 (70-153)||(22264622-22264705)
chr7 (92-185)||(42814884-42814978)
chr7 (94-139)||(19612645-19612690)
chr7 (70-163)||(39145762-39145855)
chr7 (69-162)||(40332096-40332189)
chr7 (74-189)||(1469114-1469229)
chr7 (70-140)||(23854394-23854464)
chr7 (73-163)||(28089817-28089907)
chr7 (114-163)||(654814-654863)
chr7 (73-162)||(9718098-9718187)
chr7 (97-160)||(29785285-29785349)
chr7 (70-158)||(31713010-31713098)
chr7 (74-160)||(3950901-3950988)
chr7 (92-163)||(27704022-27704093)
chr7 (70-163)||(22638290-22638383)
chr7 (74-123)||(28003838-28003887)
chr7 (111-163)||(16374033-16374085)
chr7 (127-163)||(29861725-29861761)
chr7 (94-185)||(31273936-31274028)
[»] chr6 (29 HSPs)
chr6 (69-163)||(15360208-15360302)
chr6 (70-179)||(9208246-9208355)
chr6 (70-163)||(9238969-9239062)
chr6 (70-186)||(33499468-33499585)
chr6 (70-161)||(12591631-12591722)
chr6 (70-163)||(3222745-3222837)
chr6 (92-179)||(17149550-17149637)
chr6 (74-160)||(14212890-14212976)
chr6 (70-163)||(13753234-13753327)
chr6 (70-159)||(22576061-22576150)
chr6 (70-163)||(34147340-34147433)
chr6 (70-163)||(34159956-34160049)
chr6 (70-185)||(11007159-11007275)
chr6 (76-163)||(11448871-11448958)
chr6 (70-163)||(654256-654349)
chr6 (72-161)||(21982432-21982521)
chr6 (73-185)||(1344934-1345045)
chr6 (70-160)||(28672061-28672151)
chr6 (70-163)||(17081164-17081257)
chr6 (94-186)||(10377733-10377825)
chr6 (73-160)||(9843935-9844022)
chr6 (69-163)||(5360181-5360275)
chr6 (107-163)||(6691532-6691588)
chr6 (81-160)||(3907546-3907625)
chr6 (116-163)||(9583413-9583460)
chr6 (117-162)||(28028578-28028623)
chr6 (127-163)||(12390476-12390512)
chr6 (146-186)||(17225737-17225777)
chr6 (75-163)||(21182325-21182413)
[»] chr5 (40 HSPs)
chr5 (72-186)||(19145498-19145612)
chr5 (70-163)||(27498841-27498934)
chr5 (66-163)||(25586922-25587019)
chr5 (70-163)||(31288056-31288149)
chr5 (70-163)||(32059550-32059643)
chr5 (70-199)||(36895419-36895548)
chr5 (73-185)||(8484748-8484861)
chr5 (70-163)||(33709611-33709703)
chr5 (70-160)||(13038567-13038657)
chr5 (70-160)||(13108562-13108652)
chr5 (70-163)||(1827640-1827733)
chr5 (73-162)||(4603774-4603863)
chr5 (70-163)||(11926612-11926705)
chr5 (70-163)||(15641215-15641308)
chr5 (71-164)||(36954813-36954906)
chr5 (73-162)||(38631072-38631161)
chr5 (70-160)||(34310136-34310226)
chr5 (70-163)||(23270632-23270725)
chr5 (70-163)||(38684202-38684295)
chr5 (70-150)||(22392695-22392775)
chr5 (69-163)||(15931052-15931146)
chr5 (85-160)||(37495056-37495131)
chr5 (93-163)||(12398558-12398628)
chr5 (73-162)||(8780475-8780564)
chr5 (71-162)||(40330628-40330719)
chr5 (93-163)||(19456320-19456389)
chr5 (70-163)||(30485822-30485915)
chr5 (73-185)||(930572-930685)
chr5 (70-163)||(12317260-12317353)
chr5 (70-162)||(5049131-5049223)
chr5 (70-185)||(11464994-11465110)
chr5 (103-163)||(18207234-18207294)
chr5 (104-163)||(10869675-10869734)
chr5 (68-123)||(12647732-12647787)
chr5 (92-163)||(15971232-15971303)
chr5 (93-146)||(15485418-15485471)
chr5 (73-163)||(25750719-25750811)
chr5 (70-163)||(42193479-42193572)
chr5 (70-134)||(33025474-33025538)
chr5 (69-145)||(34049815-34049891)
[»] chr3 (54 HSPs)
chr3 (70-190)||(4252479-4252599)
chr3 (70-160)||(31537951-31538041)
chr3 (70-163)||(30807263-30807356)
chr3 (70-163)||(35492905-35492998)
chr3 (70-162)||(30257618-30257710)
chr3 (70-162)||(34492686-34492778)
chr3 (68-163)||(40133559-40133654)
chr3 (70-161)||(46576342-46576433)
chr3 (70-177)||(55371381-55371488)
chr3 (70-163)||(8456260-8456353)
chr3 (70-163)||(40940819-40940912)
chr3 (70-163)||(48977382-48977475)
chr3 (70-185)||(21362937-21363053)
chr3 (70-162)||(45529865-45529957)
chr3 (68-163)||(7485635-7485730)
chr3 (68-139)||(36660762-36660833)
chr3 (72-163)||(53424286-53424377)
chr3 (70-163)||(25289824-25289917)
chr3 (70-163)||(49258372-49258465)
chr3 (71-160)||(52455762-52455851)
chr3 (87-163)||(26108303-26108379)
chr3 (70-162)||(50582986-50583078)
chr3 (71-186)||(51390926-51391041)
chr3 (68-185)||(7470302-7470420)
chr3 (70-163)||(15566609-15566701)
chr3 (82-163)||(26174119-26174200)
chr3 (70-163)||(29915379-29915472)
chr3 (70-163)||(29964532-29964625)
chr3 (70-163)||(45272526-45272619)
chr3 (82-163)||(52821745-52821826)
chr3 (75-163)||(25379760-25379848)
chr3 (74-163)||(6041782-6041871)
chr3 (70-163)||(18176997-18177090)
chr3 (92-163)||(53234020-53234091)
chr3 (71-184)||(16140292-16140405)
chr3 (94-163)||(26158836-26158905)
chr3 (70-163)||(32151419-32151511)
chr3 (98-163)||(39041962-39042027)
chr3 (71-160)||(50162038-50162127)
chr3 (70-163)||(51532783-51532876)
chr3 (74-162)||(4462631-4462719)
chr3 (94-162)||(53863850-53863918)
chr3 (69-160)||(55287796-55287887)
chr3 (103-162)||(9853643-9853702)
chr3 (68-163)||(50731344-50731438)
chr3 (68-163)||(50781416-50781510)
chr3 (112-163)||(53288822-53288873)
chr3 (127-184)||(2511385-2511443)
chr3 (93-163)||(10083929-10083999)
chr3 (93-163)||(10190852-10190922)
chr3 (94-140)||(35623271-35623317)
chr3 (70-163)||(19857047-19857138)
chr3 (94-163)||(34844396-34844465)
chr3 (94-162)||(36803074-36803142)
[»] scaffold0070 (1 HSPs)
scaffold0070 (69-163)||(40318-40412)
[»] scaffold0199 (1 HSPs)
scaffold0199 (70-172)||(8508-8610)
[»] scaffold0623 (1 HSPs)
scaffold0623 (74-163)||(1166-1255)
[»] scaffold0366 (2 HSPs)
scaffold0366 (74-163)||(9409-9498)
scaffold0366 (74-163)||(12110-12199)
[»] scaffold0049 (1 HSPs)
scaffold0049 (70-160)||(66756-66846)
[»] scaffold0028 (1 HSPs)
scaffold0028 (70-160)||(27770-27860)
[»] scaffold0460 (1 HSPs)
scaffold0460 (70-163)||(8289-8382)
[»] scaffold0459 (1 HSPs)
scaffold0459 (74-163)||(10803-10892)
[»] scaffold0328 (1 HSPs)
scaffold0328 (70-163)||(14985-15078)
[»] scaffold0068 (1 HSPs)
scaffold0068 (70-162)||(41755-41847)
[»] scaffold0051 (1 HSPs)
scaffold0051 (71-163)||(52981-53073)
[»] scaffold0019 (1 HSPs)
scaffold0019 (95-163)||(161828-161896)
[»] scaffold0217 (1 HSPs)
scaffold0217 (70-163)||(7419-7512)
[»] scaffold0200 (1 HSPs)
scaffold0200 (70-163)||(26653-26746)
[»] scaffold0160 (1 HSPs)
scaffold0160 (87-186)||(29229-29328)
[»] scaffold0020 (1 HSPs)
scaffold0020 (119-178)||(123146-123205)
[»] scaffold0157 (1 HSPs)
scaffold0157 (103-161)||(20249-20307)
[»] scaffold0102 (1 HSPs)
scaffold0102 (127-163)||(39143-39179)
[»] scaffold0012 (1 HSPs)
scaffold0012 (94-138)||(240892-240936)


Alignment Details
Target: chr8 (Bit Score: 165; Significance: 2e-88; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 35 - 215
Target Start/End: Original strand, 3794754 - 3794934
Alignment:
Q  35 tctcgcacgctctaacaccattcataagcatactgaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctca 134  Q
    ||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3794754 tctcgcacattctaacaccattcataagcatactgaatccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctca 3794853  T
Q  135 tgttcggttccctctggtgccaatttcggcaggcaagttcatacaaagctttactcgagcttagataccgagttttcaaaa 215  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3794854 tgttcggttccctctggtgccaatttcggcgggcaagttcatacaaagctttactcgagcttagataccgagttttcaaaa 3794934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 3734827 - 3734733
Alignment:
Q  69 gaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||  ||||||||| ||||| ||||||||||||||||||||||    
T  3734827 gaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcgg 3734733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 34237859 - 34237765
Alignment:
Q  69 gaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  34237859 gaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 34237765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 73 - 199
Target Start/End: Complemental strand, 34694776 - 34694650
Alignment:
Q  73 ccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagt 172  Q
    ||||||| |||||  ||| |||||| |||  ||||||| ||||||||||||||||||||| | ||||| |||| |||||||||||||||||  ||||| |    
T  34694776 ccatttggggttggtctagtggttgacttgtgatcttggagtttgctcctctcaaggtcttaggttcgattccatctggtgccaatttcggtgggcaaat 34694677  T
Q  173 tcatacaaagctttactcgagcttaga 199  Q
    |||||||||||||| |||  |||||||    
T  34694676 tcatacaaagctttgctccggcttaga 34694650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 199
Target Start/End: Original strand, 41070770 - 41070888
Alignment:
Q  81 ggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcatacaa 180  Q
    ||||| |||| |||||| ||| |||||||| ||| |||| |||||||||||||| ||||| |||||| ||||| |||||||||  ||||||||||||||     
T  41070770 ggttggcctagtggttgacttgggatcttggagtgtgctactctcaaggtctcaagttcgattccctttggtgtcaatttcggtgggcaagttcatacat 41070869  T
Q  181 agctttactcgagcttaga 199  Q
    ||||||||||  |||||||    
T  41070870 agctttactctggcttaga 41070888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 185
Target Start/End: Complemental strand, 26169052 - 26168936
Alignment:
Q  69 gaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggc 168  Q
    ||||||||||  ||||| |||| ||||| |||| |||||||| ||||||||||||||||||||||| ||| | ||||  ||| ||||||||||||  |||    
T  26169052 gaacccatttagggttggcctagtggtttgcttgggatcttggagtttgctcctctcaaggtctcaggtttgattcctcctgatgccaatttcggtgggc 26168953  T
Q  169 aagttcatacaaagctt 185  Q
    ||||||||||| |||||    
T  26168952 aagttcatacagagctt 26168936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 4718643 - 4718736
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctca-aggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||    
T  4718643 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcct-tcagaggtctcaggttcgattccctctggtgccaatttcgg 4718736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 28193472 - 28193565
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||| ||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  28193472 aacctatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 28193565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 39349254 - 39349347
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| || | |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  39349254 aacccatttggggttggcccagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 39349347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 186
Target Start/End: Complemental strand, 3403705 - 3403589
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggca 169  Q
    |||||||||| ||||| |||   ||||||| |  ||||||| ||||||||| ||||||||||| ||||||| |||| |||||||||||||||||  ||||    
T  3403705 aacccatttgaggttggccttggggttggcctgagatcttggagtttgctcatctcaaggtcttatgttcgattccatctggtgccaatttcggtgggca 3403606  T
Q  170 agttcatacaaagcttt 186  Q
    ||| |||||||| ||||    
T  3403605 agtccatacaaaacttt 3403589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 27746535 - 27746445
Alignment:
Q  73 ccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||| ||||| |||| ||||||| || |||||||| ||||||||||||  ||||||||| ||||| |||||| |||||||||||||||    
T  27746535 ccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcgg 27746445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 19471608 - 19471697
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    ||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||| | |||||||||||||||||||    
T  19471608 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattt 19471697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 19542532 - 19542621
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    ||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||| | |||||||||||||||||||    
T  19542532 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattt 19542621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 19590164 - 19590075
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    ||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||| | |||||||||||||||||||    
T  19590164 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattt 19590075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 20305906 - 20305998
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||||||||| ||||| |||| |||||||||| |||||||  ||||||||||||  |||||||||  |||| |||| ||||||||||||||||    
T  20305906 aacccatttggggttggcctagtggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattccttctggtgccaatttcg 20305998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 21092539 - 21092631
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||||||||| ||||| |||| |||||||||| |||||||  ||||||||||||  |||||||||  |||| |||| ||||||||||||||||    
T  21092539 aacccatttggggttggcctagtggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattccttctggtgccaatttcg 21092631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 2618184 - 2618275
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttc 161  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   ||||||   ||||| ||||||||||||||||||||    
T  2618184 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtcttgggttcgattccctctggtgccaatttc 2618275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 34639387 - 34639281
Alignment:
Q  92 tggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcatacaaagctttactcg 191  Q
    |||||||||| |||||||| ||| ||||||||||||||||||| | || | |||||||||||||||||||||  || |||| |||||| |||||| |||     
T  34639387 tggttggcttgggatcttggagtgtgctcctctcaaggtctcaggctc-gatccctctggtgccaatttcggtgggtaagtccatacagagctttgctct 34639289  T
Q  192 agcttaga 199  Q
     |||||||    
T  34639288 ggcttaga 34639281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 14632975 - 14633045
Alignment:
Q  93 ggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  14632975 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 14633045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 18532105 - 18532198
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||| | || |||||||||    
T  18532105 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctcagatgtcaatttcgg 18532198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 42643321 - 42643228
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||| ||| |||||||| ||||||||||||   ||||||||  |||| |||||||| |||||||||||||    
T  42643321 aacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcagattcgattccctctagtgccaatttcgg 42643228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 185
Target Start/End: Original strand, 32879277 - 32879393
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggc- 168  Q
    |||||||||| |||||  ||| |||||| ||| |||||||  |||||| |||||   |||||||| ||||| ||||||||||||||||||||||  |||     
T  32879277 aacccatttggggttggtctagtggttgacttgggatcttcgagtttggtcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggct 32879376  T
Q  169 aagttcatacaaagctt 185  Q
    ||||||||||| |||||    
T  32879377 aagttcatacagagctt 32879393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 163
Target Start/End: Original strand, 28964033 - 28964124
Alignment:
Q  72 cccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||| |||||  ||| ||||||| ||  ||||||  ||||||||||||| ||||| ||||||||| |||| |||||||||||||||||    
T  28964033 cccatttggggttggtctagtggttggtttgagatcttagagtttgctcctcttaaggtttcatgttcgattccatctggtgccaatttcgg 28964124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 179
Target Start/End: Complemental strand, 8387644 - 8387538
Alignment:
Q  73 ccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagt 172  Q
    ||||||| ||||| |||| |||||| |||  ||||||  |||||||| |||||| ||||||| ||||| || |||||||||||||||| ||  |||||||    
T  8387644 ccatttggggttggcctagtggttgtcttgagatcttagagtttgcttctctcagggtctcaagttcgatttcctctggtgccaattttggtgggcaagt 8387545  T
Q  173 tcataca 179  Q
     ||||||    
T  8387544 ccataca 8387538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 15259606 - 15259516
Alignment:
Q  73 ccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||| |||||  ||| ||||||| || |||||||| | ||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  15259606 ccatttggggttggtctagtggttggtttgggatcttggattttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 15259516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 36094729 - 36094795
Alignment:
Q  117 gctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcatacaaagc 183  Q
    |||||||||||||||||| ||||| |||||||||||  ||||||||| || ||||| ||||||||||    
T  36094729 gctcctctcaaggtctcaggttcgattccctctggtatcaatttcggtagacaagtccatacaaagc 36094795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 178
Target Start/End: Complemental strand, 11715010 - 11714914
Alignment:
Q  82 gttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcatac 178  Q
    |||| |||| ||||||| ||  ||||||| |||||||| |||||||| | ||| ||||| ||||| ||| |||||||||| || |||||||||||||    
T  11715010 gttggcctagtggttggtttgagatcttggagtttgcttctctcaagatttcaggttcgattccccctgatgccaatttcagcgggcaagttcatac 11714914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 21603245 - 21603321
Alignment:
Q  87 cctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||| |||||||||| |||||||  ||||||||||||   |||||||| ||||| |||||| |||||||||||||||    
T  21603245 cctagtggttggcttgggatcttagagtttgctcctccagaggtctcaggttcgattccctatggtgccaatttcgg 21603321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 199
Target Start/End: Original strand, 13749099 - 13749182
Alignment:
Q  116 tgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcatacaaagctttactcgagcttaga 199  Q
    ||||||||||||||| ||| ||||| || |||  ||||||||||| ||  ||||||||||||||||||||| |||  |||||||    
T  13749099 tgctcctctcaaggtttcaggttcgatttccttcggtgccaattttggtgggcaagttcatacaaagctttgctctggcttaga 13749182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 18128533 - 18128604
Alignment:
Q  92 tggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||| ||| |||||||||||| ||||||| ||||||||| |  |||| ||| ||||||||||||||||||    
T  18128533 tggttgacttgggatcttgaagtgtgctcctttcaaggtcttagattcgattctctctggtgccaatttcgg 18128604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 22200741 - 22200634
Alignment:
Q  92 tggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcatacaaagctttactcg 191  Q
    ||||||| || |||||||| ||||| || ||||||| |||||| ||||| |||||||| ||||||||||||   |  ||||||||||| |||||| |||     
T  22200741 tggttggtttgggatcttggagtttacttctctcaaagtctcaggttcgattccctctagtgccaatttcgagggaaaagttcatacagagctttgctct 22200642  T
Q  192 agcttaga 199  Q
     |||||||    
T  22200641 ggcttaga 22200634  T

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Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 264590 - 264509
Alignment:
Q  82 gttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||| |||| |||||||||| |||||||  ||||||||||||   || ||||| ||||| |||||||| |||||||||||||    
T  264590 gttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcgg 264509  T

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Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 651331 - 651412
Alignment:
Q  82 gttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||| |||| |||||||||| |||||||  ||||||||||||   || ||||| ||||| |||||||| |||||||||||||    
T  651331 gttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcgg 651412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 837066 - 837147
Alignment:
Q  82 gttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||| |||| |||||||||| |||||||  ||||||||||||   || ||||| ||||| |||||||| |||||||||||||    
T  837066 gttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcgg 837147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 8765718 - 8765637
Alignment:
Q  81 ggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||||| |||||| |||||||  ||||||| |||||||||| |   || ||||| ||||| |||||||||||||||||||||    
T  8765718 ggttgagctaatgattggcttgagatcttggagtttgctcccccagagatctcaggttcgattccctctggtgccaatttcg 8765637  T

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Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 42328004 - 42328095
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||| ||||| |||| |||||||||| |||||||| ||||| ||||||   |||| ||| ||| | ||||||||| ||||||||||||    
T  42328004 acccatttggggttggcctagtggttggcttgggatcttggagttt-ctcctccagaggtgtcaggtttgattccctctgttgccaatttcgg 42328095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 4698903 - 4698833
Alignment:
Q  93 ggttggcttaggatcttgaagtttgctcctctca-aggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||| || |||||||| ||||||||||| ||| |||||||| ||||| |||||||||||| |||||||||    
T  4698903 ggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattccctctggtgtcaatttcgg 4698833  T

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Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 5202294 - 5202223
Alignment:
Q  69 gaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcg 140  Q
    |||| |||||| |||||  ||||| ||||| ||| ||||||||||||||||| |||||| |||||| |||||    
T  5202294 gaactcatttggggttggtctaatagttggtttaagatcttgaagtttgctcatctcaaagtctcaagttcg 5202223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 8042655 - 8042722
Alignment:
Q  73 ccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcg 140  Q
    ||||||| |||||||||| || ||||||| |||||||| ||||||||||||  || |||||| |||||    
T  8042655 ccatttggggttgacctagtgcttggcttgggatcttggagtttgctcctccaaaagtctcaggttcg 8042722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 174
Target Start/End: Original strand, 15974936 - 15975006
Alignment:
Q  103 ggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttc 174  Q
    |||||||| ||| ||||||||||||||||||| ||||| ||||| || |||| ||||||||  |||||||||    
T  15974936 ggatcttggagtatgctcctctcaaggtctcaagttcgattccc-ctagtgcaaatttcggtgggcaagttc 15975006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 16317636 - 16317703
Alignment:
Q  94 gttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttc 161  Q
    |||||||| ||| |||  ||| |||||||||||  |||||||||||| ||| ||||||||||||||||    
T  16317636 gttggcttgggaccttagagtgtgctcctctcagcgtctcatgttcgattctctctggtgccaatttc 16317703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 6953159 - 6953117
Alignment:
Q  121 ctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||    
T  6953159 ctctaaaggtctcaggttcgattccctctggtgccaatttcgg 6953117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 7558146 - 7558056
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    |||||||||| ||||| |||| | ||| |||| |||||||| ||||||||||||   | ||||||  |||| || ||||||||||||||||    
T  7558146 aacccatttggggttggcctagtagttagcttgggatcttggagtttgctcctccagaagtctcagattcgatttcctctggtgccaattt 7558056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 12312877 - 12312934
Alignment:
Q  103 ggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    |||||||| ||||||||| ||||||  ||||| ||||| || ||||||||||||||||    
T  12312877 ggatcttggagtttgctcttctcaaaatctcaagttcgatttcctctggtgccaattt 12312934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 20469940 - 20470005
Alignment:
Q  95 ttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    ||||||| |||||||| ||||||||||||   |||||||| ||||| |||||||| | ||||||||    
T  20469940 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctagagccaattt 20470005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 28474270 - 28474322
Alignment:
Q  94 gttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccc 146  Q
    ||||| || ||||||| |||||||||||||||||||||||  ||||| |||||    
T  28474270 gttggattgggatcttaaagtttgctcctctcaaggtctcgagttcgattccc 28474322  T

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Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 186
Target Start/End: Complemental strand, 41621799 - 41621683
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggca 169  Q
    |||||||||| ||||| |||||||||||||||  ||||||| ||||||||||||||||||||||||||| | || |||||||||||||||| ||  ||||    
T  41621799 aacccatttggggttggcctaatggttggcttgagatcttggagtttgctcctctcaaggtctcatgtttgatttcctctggtgccaattttggtgggca 41621700  T
Q  170 agttcatacaaagcttt 186  Q
    | | |||||| ||||||    
T  41621699 aatccatacagagcttt 41621683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 163
Target Start/End: Original strand, 25852207 - 25852301
Alignment:
Q  69 gaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||  ||||||||| ||||| ||||||||||||||||||||||    
T  25852207 gaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcgg 25852301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 71 - 179
Target Start/End: Complemental strand, 13873497 - 13873388
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggc-a 169  Q
    ||||||||| ||||| |||| ||||| |||| |||||||| |||||||||||   ||||||||| ||||| |||||||||||||||||||||| |||| |    
T  13873497 acccatttggggttggcctagtggtttgcttgggatcttggagtttgctccttcaaaggtctcaggttcgattccctctggtgccaatttcggtaggcta 13873398  T
Q  170 agttcataca 179  Q
    ||||||||||    
T  13873397 agttcataca 13873388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 40059055 - 40058962
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| |||||||||||||  |||||||| ||||| ||| ||||||||||||||||||    
T  40059055 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctggtgccaatttcgg 40058962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 32986191 - 32986284
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||  ||||||||||||||||||||||    
T  32986191 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgccaatttcgg 32986284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 34835527 - 34835616
Alignment:
Q  74 catttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||| |||||  ||| |||||||||| |||||||  ||||||||||||| ||||||||||||||| |||||||||||| |||||||||    
T  34835527 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctctggtgtcaatttcgg 34835616  T

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Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 54127545 - 54127452
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||  ||||||||| ||||  |||||||| |||||||||||||    
T  54127545 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcaattccctcttgtgccaatttcgg 54127452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 163
Target Start/End: Complemental strand, 27529000 - 27528905
Alignment:
Q  68 tgaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||| || ||||| | || |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  27529000 tgaacccatctggggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 27528905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 52983613 - 52983704
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttc 161  Q
    |||||||||| ||||| |||| ||||||||||  ||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||    
T  52983613 aacccatttggggttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 52983704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 13017742 - 13017831
Alignment:
Q  89 taatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcatac 178  Q
    ||||||||||||| | |||||||||| || |||||||||||||||| ||||  ||||||||| ||||||||| ||  |||||||||||||    
T  13017742 taatggttggcttggaatcttgaagtgtgttcctctcaaggtctcaggttccattccctctgttgccaattttggtgggcaagttcatac 13017831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 13771686 - 13771593
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| |||||  || ||||||||||| |||||||||||||||||| |||||||||||||  |||| ||||||||| || |||| ||||    
T  13771686 aacccatttggggttggtctgatggttggcttgggatcttgaagtttgctcatctcaaggtctcaaattcgattccctctgatgtcaatctcgg 13771593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 22625273 - 22625180
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||| ||||||   |||||||| ||||| |||||||||| |||||||||||    
T  22625273 aacccatttgaggttggcctagtggttggcttgggatcttggagtttactcctccagaggtctcaggttcgattccctctggagccaatttcgg 22625180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 33696482 - 33696389
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||  ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||  ||||||||||||||||||||||    
T  33696482 aacccatttagggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgccaatttcgg 33696389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 2351024 - 2351100
Alignment:
Q  87 cctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||| |||||||||| | |||||||||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  2351024 cctagtggttggcttggaatcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 2351100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 7392143 - 7392073
Alignment:
Q  93 ggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||| |||||||| ||||||||||||  ||||||||| ||||| |||||| |||||||||||||||    
T  7392143 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctatggtgccaatttcgg 7392073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 46714386 - 46714480
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcg-gttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| |||||  |||||| |||||||||||||||    
T  46714386 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttccctttggtgccaatttcgg 46714480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 33992620 - 33992713
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||  |||||||||| ||||||| || |||||||| ||||||||||||   |||||| | ||||| ||| ||||||||||||||||||    
T  33992620 aacccatttagggttgacctagtggttggtttgggatcttggagtttgctcctccagaggtcttaggttcgattctctctggtgccaatttcgg 33992713  T

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Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 34844961 - 34844868
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| ||||| ||||  ||||||| ||||||||||||   |||||||| ||||| ||| ||||||||||||||||||    
T  34844961 aacccatttggggttggcctagtggtttgcttgagatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcgg 34844868  T

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Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 35674944 - 35674851
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| || | |||||||||| |||||||| ||||||||| ||  |||||| || ||||| |||||||||| |||||||||||    
T  35674944 aacccatttggggttggccaagtggttggcttgggatcttggagtttgctcttccaaaggtcacaggttcgattccctctggagccaatttcgg 35674851  T

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Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 1985830 - 1985922
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||||||||| | ||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| |||||| |||||| |||||||    
T  1985830 aacccatttgggattggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgcgaatttcg 1985922  T

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Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 20566346 - 20566437
Alignment:
Q  73 ccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggt-ctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   ||||  ||| ||||| ||||||||||||||||||||||    
T  20566346 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtgatcaggttcgattccctctggtgccaatttcgg 20566437  T

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Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 51535618 - 51535697
Alignment:
Q  81 ggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    ||||| |||| |||||| ||| |||||||| ||||||||||||   |||||||| ||||| |||||||||||||||||||    
T  51535618 ggttggcctagtggttgacttgggatcttggagtttgctcctccacaggtctcaggttcgattccctctggtgccaattt 51535697  T

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Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 42508585 - 42508493
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||| ||||| ||||||||||||||||| ||| ||||||||| ||||||||| ||||| |||| | ||| | || | | ||||||||||||||    
T  42508585 aaccgatttgaggttgacctaatggttgacttgggatcttgatgtttgctcccctcaaagtctaaagtttgatttcttttggtgccaatttcg 42508493  T

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Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 49287874 - 49287945
Alignment:
Q  92 tggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||| || |||||||| ||||||||||||   |||||||| ||||| ||| ||||||||||||||||||    
T  49287874 tggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcgg 49287945  T

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Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 19220528 - 19220618
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttc 161  Q
    ||||||||| ||||| | |  |||||| |||| ||||||| ||| ||||||||||||||| ||| ||||| || ||||| |||||||||||    
T  19220528 acccatttgaggttggcatggtggttgacttaagatcttggagtgtgctcctctcaaggtttcaggttcgatttcctctagtgccaatttc 19220618  T

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Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 38869794 - 38869860
Alignment:
Q  95 ttggcttaggatcttgaagtttgctcctc-tcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    ||||||| |||||| | ||| |||||||| ||||||||||| ||||| |||||||||||||||||||    
T  38869794 ttggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattccctctggtgccaattt 38869860  T

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Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 13584454 - 13584365
Alignment:
Q  73 ccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    ||||||| ||||| |||| |||||||| |  ||| ||| ||||||||||||  || |||||| ||||| |||||||||||| ||||||||    
T  13584454 ccatttgaggttggcctagtggttggcctgagatattggagtttgctcctccaaaagtctcaagttcgattccctctggtgtcaatttcg 13584365  T

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Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 19660735 - 19660642
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||||  |||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||| | ||| ||||| ||| ||||||||    
T  19660735 aacccatttggagttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattctctctgatgcaaatttcgg 19660642  T

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Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 20078163 - 20078094
Alignment:
Q  94 gttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||| |||||||| ||||||||||||   |||||||| ||| | ||||| ||||||||||||||||    
T  20078163 gttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattcccactggtgccaatttcgg 20078094  T

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Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 22630332 - 22630277
Alignment:
Q  127 aggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcatacaaag 182  Q
    |||||||| ||||| ||||||||||||||||||| ||  ||||||| |||||||||    
T  22630332 aggtctcaggttcgattccctctggtgccaattttggtgggcaagtccatacaaag 22630277  T

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Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 163
Target Start/End: Original strand, 38740890 - 38740937
Alignment:
Q  116 tgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||| ||||||||| ||||| |||||||||||| |||||||||    
T  38740890 tgctcctcttaaggtctcaggttcgattccctctggtgtcaatttcgg 38740937  T

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Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 149
Target Start/End: Original strand, 42245744 - 42245819
Alignment:
Q  74 catttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctct 149  Q
    |||||| ||||| |||| |||||| ||| |||||||  ||||||||||||| ||||||||  ||||| ||||||||    
T  42245744 catttggggttggcctagtggttgacttgggatcttagagtttgctcctctaaaggtctcgggttcgattccctct 42245819  T

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Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 56409976 - 56410039
Alignment:
Q  94 gttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaa 157  Q
    |||||||| ||| |||| ||| ||||||||||||||||||| ||||| ||| | ||||||||||    
T  56409976 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattctccctggtgccaa 56410039  T

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Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 12500228 - 12500170
Alignment:
Q  103 ggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttc 161  Q
    |||||||| |||||||||||   ||||||||| ||| | ||||||||||||||||||||    
T  12500228 ggatcttggagtttgctccttcaaaggtctcaggtttgattccctctggtgccaatttc 12500170  T

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Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 35229173 - 35229254
Alignment:
Q  81 ggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| |||| |||  ||||||||||||    
T  35229173 ggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccttct-atgccaatttcgg 35229254  T

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Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 158
Target Start/End: Complemental strand, 43352509 - 43352439
Alignment:
Q  88 ctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaat 158  Q
    ||||||||||||||  |||| || |||||||||||||||||  |||| ||||| ||| |||||||| ||||    
T  43352509 ctaatggttggcttgagatcatggagtttgctcctctcaagaactcaggttcgattctctctggtgtcaat 43352439  T

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Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 21344842 - 21344887
Alignment:
Q  94 gttggcttaggatcttgaagtttgctcctctcaaggtctcatgttc 139  Q
    |||||||| ||| |||| ||| ||||||||||||||||||||||||    
T  21344842 gttggcttgggaccttggagtgtgctcctctcaaggtctcatgttc 21344887  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 161
Target Start/End: Original strand, 37455617 - 37455661
Alignment:
Q  116 tgctcctctcaaggtctcatgttcggttccctctggtgccaatttc 161  Q
    ||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  37455617 tgctcctctcaaggtctcaggttcgattccc-ctggtgccaatttc 37455661  T

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Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 40307536 - 40307628
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||||   |||||||| || |||| || |||| ||| ||| |||||||||||||||||||| || | || ||| |||||||||||||||    
T  40307536 aacccatttggaattgacctagtgtttggtttgggattttggagtgtgctcctctcaaggtctcatatttgatt-cctttggtgccaatttcgg 40307628  T

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Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 44343533 - 44343598
Alignment:
Q  95 ttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    ||||||| |||||||| |||||||||| |  |||| |||| ||||| ||||||||||||| |||||    
T  44343533 ttggcttgggatcttggagtttgctcccccaaaggactcaagttcgattccctctggtgctaattt 44343598  T

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Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 179
Target Start/End: Complemental strand, 9646414 - 9646310
Alignment:
Q  75 atttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttc 174  Q
    ||||| |||||  ||| ||||||| || |||||||  ||| ||||||| ||||||||||||||| | ||| ||||| || |||||||    |||||||||    
T  9646414 atttggggttggtctagtggttggtttgggatctttgagtgtgctcctgtcaaggtctcatgtttgattctctctgatgacaatttcaatgggcaagttc 9646315  T
Q  175 ataca 179  Q
    |||||    
T  9646314 ataca 9646310  T

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Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 71 - 199
Target Start/End: Complemental strand, 8192553 - 8192425
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaa 170  Q
    ||||||||| ||||| |||| |||||||||| |||||||| ||| ||||||||||||||||||| ||||| ||||||||||||||||| ||||  |||||    
T  8192553 acccatttggggttggcctagtggttggcttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccctctggtgccaatgtcggtgggcaa 8192454  T
Q  171 gttcatacaaagctttactcgagcttaga 199  Q
    || |||| | |||||| |||  |||||||    
T  8192453 gtccatatagagctttgctctggcttaga 8192425  T

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Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 4618877 - 4618772
Alignment:
Q  81 ggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcatacaa 180  Q
    ||||| |||| |||||||||| | |||||| ||| ||||||||||||||| ||| ||||| || || ||||||||||||||||| ||||||| |||||||    
T  4618877 ggttggcctagtggttggcttggaatcttggagtatgctcctctcaaggtttcaggttcgatttcccctggtgccaatttcggcgggcaagtccatacaa 4618778  T
Q  181 agcttt 186  Q
    | ||||    
T  4618777 aacttt 4618772  T

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Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 190
Target Start/End: Original strand, 29698164 - 29698261
Alignment:
Q  93 ggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcatacaaagctttactc 190  Q
    ||||||||| |||||||| | ||||||||||||||||||||| |||   || ||||||||| |||||||||  |||||||||||||| ||||||||||    
T  29698164 ggttggcttgggatcttggaatttgctcctctcaaggtctcaagttttatttcctctggtgtcaatttcggtgggcaagttcatacagagctttactc 29698261  T

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Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 33827776 - 33827684
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||||||||| ||||| |||| |||||||||| |||||||| || |||||||||   |||||||| ||||| |||||||||||||||||||||    
T  33827776 aacccatttggggttggcctagtggttggcttgggatcttggagattgctcctccagaggtctcaggttcgattccctctggtgccaatttcg 33827684  T

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Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 196
Target Start/End: Complemental strand, 3405343 - 3405229
Alignment:
Q  82 gttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcatacaaa 181  Q
    ||||||||| |||||| ||| |||||||| | | ||||| |||||||||| || ||||| |||||||||||||||||||     ||||||| ||||||||    
T  3405343 gttgacctagtggttgacttgggatcttggaatgtgctcatctcaaggtcacaggttcgattccctctggtgccaattttaatgggcaagtccatacaaa 3405244  T
Q  182 gctttactcgagctt 196  Q
    ||||||||| |||||    
T  3405243 gctttactctagctt 3405229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 15037953 - 15038046
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||| ||  |||||||| ||||||||||||  ||||||||| ||||| |||||| |||||||||||||||    
T  15037953 aacccatttggggttggcctagtggttgactcgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcgg 15038046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 18976628 - 18976536
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||||||||| |||||||| | |||||||||||    
T  18976628 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccctct-gagccaatttcgg 18976536  T

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Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 25293160 - 25293253
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| |||||  ||| |||||| ||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  25293160 aacccatttgaggttggtctagtggttgacttgggatcttggagtttgctcctcgagaggtctcaggttcgattccctctggtgccaatttcgg 25293253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 44946256 - 44946163
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| |||||  ||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| |||||| |||||||||||||||    
T  44946256 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcgg 44946163  T

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Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 161
Target Start/End: Original strand, 4852556 - 4852643
Alignment:
Q  74 catttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttc 161  Q
    |||||| |||||||||| |||||| ||| | |||||| ||||||||||||  ||||||||| ||||| ||||||||||||| ||||||    
T  4852556 catttggggttgacctagtggttgacttggaatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgctaatttc 4852643  T

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Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 10582171 - 10582100
Alignment:
Q  92 tggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  10582171 tggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 10582100  T

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Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 180
Target Start/End: Complemental strand, 19525576 - 19525489
Alignment:
Q  93 ggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcatacaa 180  Q
    ||||||||| |||||||||||| || | |||||||| ||||| ||||| ||||||||||||||||||| ||  ||||||| |||||||    
T  19525576 ggttggcttgggatcttgaagtgtgtttctctcaagatctcaggttcgattccctctggtgccaattttggtgggcaagtccatacaa 19525489  T

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Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 179
Target Start/End: Complemental strand, 19606037 - 19605939
Alignment:
Q  81 ggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcataca 179  Q
    ||||| |||| |||||||||| |||||||| |||  |||||||||||||||||| ||||| ||||||||  ||| ||||||||  ||||||| ||||||    
T  19606037 ggttgccctagtggttggcttgggatcttggagtgcgctcctctcaaggtctcaggttcgattccctctaatgctaatttcggtgggcaagtccataca 19605939  T

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Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 43374505 - 43374412
Alignment:
Q  93 ggttggcttaggatcttgaagtttgctcctctca-aggtctcatgttcggttccctctggtgccaatttcggcaggc-aagttcatacaaagctt 185  Q
    ||||||||| |||||||| ||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||  ||| ||||| |||||||||||    
T  43374505 ggttggcttgggatcttggagtttgctcct-tcagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtttatacaaagctt 43374412  T

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Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 44976353 - 44976267
Alignment:
Q  74 catttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    |||||| ||||| |||| |||||||||| ||||||||  |||||||||||   |||||||| ||||| |||||||||||||||||||    
T  44976353 catttggggttggcctagtggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctggtgccaattt 44976267  T

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Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 17324764 - 17324853
Alignment:
Q  74 catttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||| ||||| |||| ||||||| || | |||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  17324764 catttggggttggcctagtggttggtttggtatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 17324853  T

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Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 32845085 - 32845178
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| | ||| |||| |||||||| ||||||||||||  || || ||| ||||| ||||||||||||||||||||||    
T  32845085 aacccatttggggttggcctagtagttagcttgggatcttggagtttgctcctccaaaagtttcaggttcgattccctctggtgccaatttcgg 32845178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 41313986 - 41314079
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| | || ||||||| || |||||||| ||||||||||||   |||||||| ||||| |||||||||||| |||||||||    
T  41313986 aacccatttggggttgccgtagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcgg 41314079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 179
Target Start/End: Complemental strand, 28194311 - 28194227
Alignment:
Q  95 ttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcataca 179  Q
    ||||||| |||||||| ||| ||||||||| ||||||| | ||||| ||| ||||||||||||||||||  ||||||| ||||||    
T  28194311 ttggcttgggatcttggagtgtgctcctcttaaggtcttaggttcgattctctctggtgccaatttcggtgggcaagtccataca 28194227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 4567637 - 4567547
Alignment:
Q  73 ccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctca-aggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||| ||||| |||| | |||||||| |||||||||||||||||||| ||| | |||||| ||||| || |||||||||||||||||||    
T  4567637 ccatttggggttggcctagtagttggcttgggatcttgaagtttgctcct-tcagaagtctcaggttcgatttcctctggtgccaatttcgg 4567547  T

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Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 11941413 - 11941323
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    |||||||||| |||||  ||| |||||||||| |||||||| ||||||||||||   |||||||| ||||  |||||| ||||||||||||    
T  11941413 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctatggtgccaattt 11941323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 36242492 - 36242422
Alignment:
Q  93 ggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||| |||||||||| ||||||||||   |||||||| ||||| |||||||||||| |||||||||    
T  36242492 ggttggcttgggatcttgaaatttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcgg 36242422  T

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Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 179
Target Start/End: Original strand, 40591188 - 40591286
Alignment:
Q  81 ggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcataca 179  Q
    |||||||||||| ||||||||  ||||||| ||| |||||||||||| |||||| ||| | || | ||||||| |||||||||  ||||||| ||||||    
T  40591188 ggttgacctaatagttggcttgagatcttggagtgtgctcctctcaaagtctcaggtttgatttcttctggtggcaatttcggtgggcaagtccataca 40591286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 162
Target Start/End: Complemental strand, 918898 - 918808
Alignment:
Q  74 catttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgt---tcggttccctctggtgccaatttcg 162  Q
    |||||| |||||||||| |||||||||| |||| |||||||||||||||||  |||||||| ||   ||| |||||||| ||||||||||||    
T  918898 catttggggttgacctagtggttggcttgggattttgaagtttgctcctct-gaggtctcaagttcgtcgattccctcttgtgccaatttcg 918808  T

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Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 162
Target Start/End: Original strand, 5394034 - 5394103
Alignment:
Q  93 ggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||||||||  ||||||| ||||||||||||  ||||||||| ||||| |||||||||||| ||||||||    
T  5394034 ggttggcttgagatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaatttcg 5394103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 30467033 - 30466940
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| ||||||| || |||| ||| |||||| ||||||  |||||||| ||||| ||| ||||| ||||||||||||    
T  30467033 aacccatttggggttggcctagtggttggtttgggatattggagtttgttcctctagaggtctcaggttcgattctctctgctgccaatttcgg 30466940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 147
Target Start/End: Complemental strand, 32526288 - 32526211
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccct 147  Q
    ||||||||||  |||| | || ||||||  || |||||||||||||||||||||||||||||||| ||||| ||||||    
T  32526288 aacccatttggagttggcttagtggttgatttgggatcttgaagtttgctcctctcaaggtctcaggttcgattccct 32526211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 27290599 - 27290675
Alignment:
Q  87 cctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||  ||||||||||||||    
T  27290599 cctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcccttcggtgccaatttcgg 27290675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 190
Target Start/End: Original strand, 36179899 - 36179990
Alignment:
Q  99 cttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcatacaaagctttactc 190  Q
    |||||||||||| |||||  || |||| |||||||||||||| ||| | ||| || ||||||||  |||||||| ||||||||| |||||||    
T  36179899 cttaggatcttggagttttttcatctcgaggtctcatgttcgattctccctgatgtcaatttcgataggcaagtccatacaaagttttactc 36179990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 36390770 - 36390678
Alignment:
Q  69 gaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||||| ||||| |||| ||||||| || ||||||   |||||||| |||  ||||||||| ||||| || |||||||||||||||||||    
T  36390770 gaacccatttggggttggcctagtggttggtttgggatctg--agtttgcttctccaaaggtctcaggttcgatttcctctggtgccaatttcgg 36390678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 14946774 - 14946864
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttc 161  Q
    |||||||||  |||| |||| |||||| |||  ||||||||||||||||||||||||||| | | ||||| ||  |||||||| |||||||    
T  14946774 acccatttggagttggcctagtggttgacttgagatcttgaagtttgctcctctcaaggttttaggttcgattttctctggtgtcaatttc 14946864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 38341754 - 38341820
Alignment:
Q  93 ggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatt 159  Q
    ||||| ||| ||||||||||||||||||||||||||||||||  |||| ||||| ||| || |||||    
T  38341754 ggttgacttgggatcttgaagtttgctcctctcaaggtctcagattcgattccccctgttgtcaatt 38341820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 24195998 - 24196091
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||| |||  ||| |||||||   |||| ||| ||||| ||||||||||||| ||||||||    
T  24195998 aacccatttggggttggcctagtggttggcttgggattttggggttcgctcctccagaggtttcaggttcgattccctctggtgcaaatttcgg 24196091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 27269554 - 27269470
Alignment:
Q  69 gaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtg 153  Q
    ||||||||||| ||||| | || |||||||||| |||||||  ||||||||||||| ||||| | | ||| | ||||||||||||    
T  27269554 gaacccatttggggttggcatagtggttggcttgggatcttcgagtttgctcctctaaaggttttaggtttgattccctctggtg 27269470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 40997552 - 40997460
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||| ||| |  ||| |||||| ||| |||||||| ||||||||||||  ||||||||||||||  ||||| || || ||||||||||    
T  40997552 acccatttgaggtgggtctagtggttgacttgggatcttggagtttgctcctccaaaggtctcatgttcaattccccctagtaccaatttcgg 40997460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 45271401 - 45271469
Alignment:
Q  93 ggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttc 161  Q
    ||||||||| |||||||  |||||||| |||   |||| ||||||||| ||||||||||||||||||||    
T  45271401 ggttggcttgggatcttagagtttgcttctccagaggtttcatgttcgattccctctggtgccaatttc 45271469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 186
Target Start/End: Original strand, 18708504 - 18708587
Alignment:
Q  103 ggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcatacaaagcttt 186  Q
    |||||||| ||| || |||||||||||||||| |||||  |||||||| | |||||||| |  |||| ||||||||| ||||||    
T  18708504 ggatcttggagtgtgttcctctcaaggtctcaggttcgactccctctgataccaatttcagtgggcatgttcatacagagcttt 18708587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 1191530 - 1191600
Alignment:
Q  93 ggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||  ||||||| ||||||||||||   |||||||| ||||| |||||||| || ||||||||||    
T  1191530 ggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgtttccctctagtaccaatttcgg 1191600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 12517804 - 12517738
Alignment:
Q  94 gttggcttaggatcttgaagtttgctcctc-tcaaggtctcatgttcggttccctctggtgccaatt 159  Q
    |||||||| ||| |||| |||||||||||| ||||||||||||||| | ||| | ||||||||||||    
T  12517804 gttggcttgggaccttggagtttgctcctcctcaaggtctcatgtttgattctccctggtgccaatt 12517738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 13266507 - 13266573
Alignment:
Q  93 ggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatt 159  Q
    |||||||||  ||||||| | ||||||||| |  |||||||||||||| ||| ||||||||||||||    
T  13266507 ggttggcttgagatcttggaatttgctcctttagaggtctcatgttcgattcactctggtgccaatt 13266573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 6714484 - 6714431
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctc 123  Q
    |||||||||| | ||| |||||||||||||||  ||||||| ||||||||||||    
T  6714484 aacccatttgggattggcctaatggttggcttgagatcttggagtttgctcctc 6714431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 38784377 - 38784324
Alignment:
Q  75 atttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaag 128  Q
    ||||| |||||| ||| || |||| ||||||||||| |||||||||||||||||    
T  38784377 atttggggttgatctagtgtttgggttaggatcttggagtttgctcctctcaag 38784324  T

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Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 41329842 - 41329927
Alignment:
Q  75 atttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    ||||| ||||| |||| ||||| | || |||||||  ||||||||||||  ||||| |||  |||| |||||||||||||||||||    
T  41329842 atttggggttggcctagtggttagtttgggatcttagagtttgctcctccaaaggtttcagattcgattccctctggtgccaattt 41329927  T

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Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 5861272 - 5861320
Alignment:
Q  85 gacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctc 133  Q
    |||||| ||||||||||  ||||||| | ||||||||||||||||||||    
T  5861272 gacctagtggttggcttgtgatcttggaatttgctcctctcaaggtctc 5861320  T

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Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 185
Target Start/End: Original strand, 32729539 - 32729654
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggca 169  Q
    |||||||||| ||||| |||| |||||||||| |||||||  |||||||||||||||| |||||| ||||| |||||| |||||||||||||||  ||||    
T  32729539 aacccatttggggttggcctagtggttggcttgggatcttcgagtttgctcctctcaaagtctcaggttcgattccctatggtgccaatttcggtgggca 32729638  T
Q  170 agttcatacaaagctt 185  Q
    ||| |||||| |||||    
T  32729639 agtccatacagagctt 32729654  T

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Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 4621440 - 4621347
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  4621440 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 4621347  T

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Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 7946838 - 7946931
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||| |||||| ||||||||||  ||||||||||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  7946838 aacccatttggggtcgacctagtggttggcttgagatcttgaagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcgg 7946931  T

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Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 24674387 - 24674480
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  24674387 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 24674480  T

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Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 46607804 - 46607897
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||| ||| |||||||| ||||||||||||  ||||||||| ||||| ||||||||||||||||||||||    
T  46607804 aacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcgg 46607897  T

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Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 24216973 - 24217065
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||| |||||||||| |||||| ||| |||||||| ||| ||||||||||||||||||| ||||| || ||| |||||||||||||||    
T  24216973 acccatttggggttgacctagtggttgacttgggatcttggagtgtgctcctctcaaggtctcaggttcgattacctttggtgccaatttcgg 24217065  T

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Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 7197449 - 7197356
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||| ||||||||||||    
T  7197449 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaatttcgg 7197356  T

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Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 8077641 - 8077734
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||| ||||||||||||||||||    
T  8077641 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcgg 8077734  T

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Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 179
Target Start/End: Complemental strand, 25237180 - 25237083
Alignment:
Q  82 gttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcataca 179  Q
    |||| |||||||||| | || |||||||| |||||||| |||||||||||||| ||||| |||||||| |||||||||||||  ||||||| ||||||    
T  25237180 gttggcctaatggttagtttgggatcttggagtttgcttctctcaaggtctcaggttcgattccctctagtgccaatttcggtgggcaagtccataca 25237083  T

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Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 30677170 - 30677263
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| |||||||||| ||||||| || |||||| | ||||||||||||  ||||||||| ||| | ||||||||||||||||||||||    
T  30677170 aacccatttggggttgacctagtggttggtttgggatctaggagtttgctcctccaaaggtctcaggtttgattccctctggtgccaatttcgg 30677263  T

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Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 1138573 - 1138689
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggca 169  Q
    |||||||||| |||||||||| ||||||||||  ||||||| ||| ||||||||||||||||| | |||||  || |||| |||||||||||||  | ||    
T  1138573 aacccatttggggttgacctagtggttggcttgagatcttggagtgtgctcctctcaaggtcttaggttcgaatctctctagtgccaatttcggtggaca 1138672  T
Q  170 agttcatacaaagcttt 186  Q
    ||| |||||| ||||||    
T  1138673 agtccatacagagcttt 1138689  T

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Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 1486415 - 1486504
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    ||||||||| |||||||||| |||||||||| |||||||| |||  ||| |||||||||||||| ||||| |||||| ||||||||||||||    
T  1486415 acccatttggggttgacctagtggttggcttgggatcttggagt--gctactctcaaggtctcaggttcgattccctttggtgccaatttcg 1486504  T

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Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 15059605 - 15059512
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| | |||||| ||||||||||||   |||||||| ||||| ||| ||||||||||||||||||    
T  15059605 aacccatttggggttggcctagtggttggcttggaatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcgg 15059512  T

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Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 45859222 - 45859153
Alignment:
Q  94 gttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||| |||||||| |||||||||||||  |||||||| ||||| ||||||||||||||||||||||    
T  45859222 gttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcgg 45859153  T

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Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 185
Target Start/End: Original strand, 168195 - 168311
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggc- 168  Q
    ||||||||||  |||| |||| |||||||||| |||||||  ||||||||| |   ||||||||| ||||| ||||||||||||||||||||||  |||     
T  168195 aacccatttggagttggcctagtggttggcttgggatcttagagtttgctctttcaaaggtctcaggttcgattccctctggtgccaatttcggtgggct 168294  T
Q  169 aagttcatacaaagctt 185  Q
    ||||||||||| |||||    
T  168295 aagttcatacagagctt 168311  T

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Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 21726723 - 21726815
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||||||||| |||||||||| ||||||  || || ||||||||||||||||||   |||||||| ||||| |||||| ||||||||||||||    
T  21726723 aacccatttgaggttgacctagtggttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcg 21726815  T

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Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 29057540 - 29057448
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||||||||| ||||| |||| ||||||| || |||||||| |||||||| |||  ||||||||| ||||| |||||||| ||||||||||||    
T  29057540 aacccatttggggttggcctagtggttggtttgggatcttggagtttgctgctccaaaggtctcaggttcgattccctcttgtgccaatttcg 29057448  T

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Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 34778336 - 34778426
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||| | ||||||||||| |||||||    
T  34778336 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtaccaattt 34778426  T

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Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 7766930 - 7766837
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||| | ||||| |||| ||||| |||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||| ||||||||    
T  7766930 aacccattcggggttggcctagtggttagcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcgg 7766837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 20487393 - 20487300
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| |||||   || |||||||||  |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  20487393 aacccatttggggttggtttagtggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcgg 20487300  T

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Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 24122021 - 24122110
Alignment:
Q  74 catttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||| ||||| | || |||||||||| ||||||||  |||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  24122021 catttggggttggcttagtggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 24122110  T

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Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 27455069 - 27454976
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| |||||  ||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||| ||||| ||||||||||||    
T  27455069 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcactctgatgccaatttcgg 27454976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 163
Target Start/End: Complemental strand, 46113600 - 46113512
Alignment:
Q  75 atttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||| ||||| |||| ||||||| || |||||||| ||||||||||||   |||||||| ||||| ||||||||||| ||||||||||    
T  46113600 atttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtaccaatttcgg 46113512  T

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Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 185
Target Start/End: Original strand, 7578420 - 7578519
Alignment:
Q  87 cctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggc-aagttcatacaaagctt 185  Q
    |||| |||||||||| |||||||| |||||| |||||   |||||||| ||||| |||||| |||||||||||||||  ||| |||| ||||||||||||    
T  7578420 cctagtggttggcttgggatcttggagtttgttcctccagaggtctcaggttcgattccctatggtgccaatttcggtgggctaagtccatacaaagctt 7578519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 68 - 163
Target Start/End: Complemental strand, 23232470 - 23232375
Alignment:
Q  68 tgaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||||| | ||| |||| |||||| ||| |||||||||||||||||| ||   |||| ||| ||||| |||||||||| |||||||||||    
T  23232470 tgaacccatttgggattggcctagtggttgacttgggatcttgaagtttgctcttccagaggtttcaggttcgattccctctggcgccaatttcgg 23232375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 25496679 - 25496584
Alignment:
Q  82 gttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcata 177  Q
    |||| |||| || ||||||| |||||||| || |||||||||| ||||||||| ||||| |||||||| ||||| |||||||   |||||||||||    
T  25496679 gttggcctagtgattggcttgggatcttggagattgctcctcttaaggtctcaagttcgattccctctagtgcctatttcggtgagcaagttcata 25496584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 1378892 - 1378985
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||  ||||| | || |||||| ||| |||||||| ||||||||||||  || |||||||||||| || ||||||||| |||||||||    
T  1378892 aacccatttaaggttggcttagtggttgacttgggatcttggagtttgctcctccaaaagtctcatgttcgatttcctctggtgtcaatttcgg 1378985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 18646847 - 18646940
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||| ||||| |||||||||| ||||||||||  ||||||  |||||||| |||   |||||||| ||||| ||| ||||||||||||||||||    
T  18646847 aacctatttggggttgacctagtggttggcttgtgatctttgagtttgcttctccagaggtctcaggttcgattctctctggtgccaatttcgg 18646940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 39964530 - 39964599
Alignment:
Q  94 gttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||  || |||| ||| ||||||||||||||||||| ||| | ||||||||||||||||||||||    
T  39964530 gttggcttgcgaccttggagtgtgctcctctcaaggtctcaggtttgattccctctggtgccaatttcgg 39964599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 37351642 - 37351571
Alignment:
Q  92 tggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| |||||||| ||||||||||||  || |||||| ||||| |||| |||| ||||||||||||    
T  37351642 tggttggcttgggatcttggagtttgctcctccaaatgtctcaggttcgattccttctgatgccaatttcgg 37351571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 19034567 - 19034473
Alignment:
Q  92 tggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcatacaaagcttt 186  Q
    ||||||| || |||||||| |||||| |||||  ||||| ||| ||||| ||  ||||||||||||||||||  ||||||| |||||| ||||||    
T  19034567 tggttggtttgggatcttggagtttgttcctcaaaaggtttcaggttcgattatctctggtgccaatttcggtgggcaagtccatacagagcttt 19034473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 33905690 - 33905620
Alignment:
Q  93 ggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||| |||||||| ||||||||||||   |||||||| ||||| |||||||||||  |||||||||    
T  33905690 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtatcaatttcgg 33905620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 9500533 - 9500465
Alignment:
Q  95 ttggcttaggatcttgaagtttgctcctctca-aggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||| |||||||| ||||||||||| ||| |||||||| ||||| ||| ||||||||||||||||||    
T  9500533 ttggcttgggatcttggagtttgctcct-tcagaggtctcaggttcgattctctctggtgccaatttcgg 9500465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 186
Target Start/End: Original strand, 16539625 - 16539718
Alignment:
Q  93 ggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcatacaaagcttt 186  Q
    |||||| || |||||||| |||  ||||||  |||||||||| ||| | ||||||||||||||||||| ||  ||||||| |||||| ||||||    
T  16539625 ggttggtttgggatcttggagtgagctccttgcaaggtctcaggtttgattccctctggtgccaattttggtgggcaagtccatacagagcttt 16539718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 4471033 - 4471101
Alignment:
Q  93 ggttggcttaggatcttgaagtttgct-cctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    |||||||||  |||||||||||||||| |||||||| |||||||||||  ||| |||| ||||||||||    
T  4471033 ggttggcttgagatcttgaagtttgctccctctcaatgtctcatgttcaattctctctcgtgccaattt 4471101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 14258630 - 14258538
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||||||||| | ||| |||| |||||||||| |||||||| |||||| |||||   | |||||  ||||| ||||||||||| |||||||||    
T  14258630 aacccatttgggcttggcctagtggttggcttgggatcttggagtttgttcctccagatgtctctggttcgattccctctggtaccaatttcg 14258538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 16899557 - 16899613
Alignment:
Q  130 tctcatgttcggttccctctggtgccaatttcggcaggcaagttcatacaaagcttt 186  Q
    ||||| ||||| ||||||||||||||||||||||  ||| ||| |||||||||||||    
T  16899557 tctcaggttcgattccctctggtgccaatttcggtgggccagtccatacaaagcttt 16899613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 36156058 - 36155998
Alignment:
Q  103 ggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||| ||||||||||||   |||| ||| ||||| ||||||||||||||||||||||    
T  36156058 ggatcttggagtttgctcctccagaggtgtcaggttcgattccctctggtgccaatttcgg 36155998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 36987558 - 36987621
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctca 134  Q
    |||||||||| ||||||| || |||||||||| || ||||||||| ||| |||||||||||||||    
T  36987558 aacccatttg-ggttgacgtagtggttggcttggggtcttgaagtgtgcacctctcaaggtctca 36987621  T

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Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 17935785 - 17935856
Alignment:
Q  92 tggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||| ||| |||||||| ||||||||||||   |||||||| ||||| |||| ||| |||||||||||||    
T  17935785 tggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccttctagtgccaatttcgg 17935856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 2537698 - 2537785
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| ||||||| || |||||||      ||||||||||||||||||| ||| | |||| | |||||||||||||||    
T  2537698 aacccatttggggttggcctagtggttggattgggatctt------tgctcctctcaaggtctcaggtttgattccatttggtgccaatttcgg 2537785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 138
Target Start/End: Original strand, 26608174 - 26608243
Alignment:
Q  68 tgaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgtt 138  Q
    ||||| |||||| ||||| |||| ||||||  || |||||||||| | |||||||||||||||||||||||    
T  26608174 tgaactcatttggggttggcctagtggttgaatt-ggatcttgaattgtgctcctctcaaggtctcatgtt 26608243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 34965323 - 34965413
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    |||| ||||| ||||  ||||||||||| |||   |||||||||| |  |||||| ||||| ||||||||| || ||||||||||||||||    
T  34965323 aacctatttgcggtttgcctaatggttgacttgaaatcttgaagtgtattcctcttaaggtttcatgttcgatttcctctggtgccaattt 34965413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 37047010 - 37047112
Alignment:
Q  94 gttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcatacaaagctttactcgag 193  Q
    |||||||| ||| |||| ||| ||||||||||||||||||| ||| | ||||| ||||| | ||||| ||  ||| ||| |||||| |||||| ||| ||    
T  37047010 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggtttgattccccctggtacaaattttggtgggctagtccatacagagctttgctctag 37047109  T
Q  194 ctt 196  Q
    |||    
T  37047110 ctt 37047112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 40802270 - 40802180
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    |||||||||| ||||| | |  ||||||||||  ||| ||| ||||||||| ||||||||||||||||| | ||| |  ||||||||||||    
T  40802270 aacccatttggggttggctttgtggttggcttgagatattggagtttgctcatctcaaggtctcatgtttgattctccatggtgccaattt 40802180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 1378743 - 1378832
Alignment:
Q  74 catttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||| |||||  ||| |||||| ||| | |||||| ||||| ||||||  ||||||||||||||| ||  |||||||| |||||||||    
T  1378743 catttggggttggtctagtggttgacttggaatcttggagtttactcctccaaaggtctcatgttcgattttctctggtgtcaatttcgg 1378832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 182
Target Start/End: Original strand, 2272342 - 2272451
Alignment:
Q  74 catttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggc-aagt 172  Q
    |||||| ||||| |||| |||||| ||| |||||||  |||||||||||    |||||||| ||| | ||||||||| |||||||||||   ||| ||||    
T  2272342 catttggggttggcctagtggttgacttgggatcttagagtttgctcctacagaggtctcaggtttgattccctctgatgccaatttcgctgggctaagt 2272441  T
Q  173 tcatacaaag 182  Q
    ||||||||||    
T  2272442 tcatacaaag 2272451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 23734134 - 23734203
Alignment:
Q  94 gttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||| |||||||  | ||||||||||   |||||||| ||||| ||||||||| ||||||||||||    
T  23734134 gttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccctctgatgccaatttcgg 23734203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 23741326 - 23741395
Alignment:
Q  94 gttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||| |||||||  | ||||||||||   |||||||| ||||| ||||||||| ||||||||||||    
T  23741326 gttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccctctgatgccaatttcgg 23741395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 39714829 - 39714789
Alignment:
Q  94 gttggcttaggatcttgaagtttgctcctctcaaggtctca 134  Q
    |||||||| |||||||| ||| |||||||||||||||||||    
T  39714829 gttggcttgggatcttggagtgtgctcctctcaaggtctca 39714789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 5286 - 5192
Alignment:
Q  69 gaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||  ||||||||| ||||| ||||||||||||||||||||||    
T  5286 gaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcgg 5192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 97570 - 97476
Alignment:
Q  69 gaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||  ||||||||| ||||| ||||||||||||||||||||||    
T  97570 gaacccatttggggttggcctagtggttggcttgggatcttgtagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcgg 97476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 4e-25; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 163
Target Start/End: Original strand, 2751268 - 2751362
Alignment:
Q  69 gaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||  ||||||||| ||||| ||||||||||||||||||||||    
T  2751268 gaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcgg 2751362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 11997847 - 11997940
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||||||||||  ||| |||||||||| |||||||| |||||||||||||  |||||||| ||||| ||||||||||||||||||||||    
T  11997847 aacccatttgtggttgggctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcgg 11997940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 7176066 - 7175972
Alignment:
Q  69 gaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  7176066 gaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 7175972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 7800034 - 7799944
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttc 161  Q
    ||||||||| |||||||||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||    
T  7800034 acccatttggggttgacctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 7799944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 7275275 - 7275368
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  7275275 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 7275368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 40543113 - 40543020
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  40543113 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 40543020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 21218037 - 21217943
Alignment:
Q  69 gaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||| ||||||||||||    
T  21218037 gaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaatttcgg 21217943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 12211735 - 12211646
Alignment:
Q  73 ccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    ||||||| ||||| |||| ||||||||||||||||||| ||| ||||||||||||| ||||| ||| | || ||||||||||||||||||    
T  12211735 ccatttggggttggcctagtggttggcttaggatcttggagtgtgctcctctcaagatctcaggtttgatttcctctggtgccaatttcg 12211646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 22119890 - 22119979
Alignment:
Q  74 catttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  22119890 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 22119979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 2103054 - 2103146
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| |||||||||| |||||||||||    
T  2103054 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcgg 2103146  T

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Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 172
Target Start/End: Original strand, 28646965 - 28647069
Alignment:
Q  68 tgaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcagg 167  Q
    |||||| ||||| ||||| |||| || ||| ||| |||||||| ||| |||| |||||||||||||| ||||| ||||||||||||||||||||||  ||    
T  28646965 tgaacctatttggggttggcctagtgattgacttgggatcttggagtgtgcttctctcaaggtctcaggttcgattccctctggtgccaatttcggtggg 28647064  T
Q  168 caagt 172  Q
    |||||    
T  28647065 caagt 28647069  T

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Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 186
Target Start/End: Complemental strand, 23330941 - 23330826
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaa 170  Q
    ||||||||| ||||  |||| |||||||||| |||| ||  ||| ||||||||||||||||||| |||||  |||||| ||||||||||||||  |||||    
T  23330941 acccatttggggttagcctagtggttggcttgggattttagagtgtgctcctctcaaggtctcaggttcgactccctccggtgccaatttcggtgggcaa 23330842  T
Q  171 gttcatacaaagcttt 186  Q
    || |||||| ||||||    
T  23330841 gtccatacagagcttt 23330826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 21835160 - 21835242
Alignment:
Q  81 ggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| |||||||||| |||||||| ||||||||||||   || ||||| ||||| ||||||||||||||||||||||    
T  21835160 ggttgacctagtggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctctggtgccaatttcgg 21835242  T

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Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 186
Target Start/End: Complemental strand, 8435895 - 8435782
Alignment:
Q  73 ccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagt 172  Q
    ||||||| |||||  ||| |||||| ||| |||||||| ||||||||||| | ||| ||| | ||||| || |||||||||||||||||||  |||||||    
T  8435895 ccatttggggttggtctagtggttgacttgggatcttggagtttgctcctttgaagatcttaggttcgatttcctctggtgccaatttcggtgggcaagt 8435796  T
Q  173 tcatacaaagcttt 186  Q
     |||||||||||||    
T  8435795 ccatacaaagcttt 8435782  T

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Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 10091186 - 10091279
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| |||||  ||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| |||||||||| |||||||||||    
T  10091186 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcgg 10091279  T

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Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 18044105 - 18044198
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   ||||| || ||||| |||||||| |||||||||||||    
T  18044105 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtcccaggttcgattccctcttgtgccaatttcgg 18044198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 27009357 - 27009450
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||| ||   |||||||| ||||| | ||||||||||||||||||||    
T  27009357 aacccatttggggttggcctagtggttggcttcggatcttggagtttgctcatccagaggtctcaggttcgatcccctctggtgccaatttcgg 27009450  T

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Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 22299864 - 22299940
Alignment:
Q  87 cctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  22299864 cctagtggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcgg 22299940  T

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Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 27312150 - 27312242
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||| ||||| ||||| |||| |||||||||| |||||||| |||||||||||||  |||| ||| ||||| |||||||| ||||||||||||    
T  27312150 aacctatttggggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtttcaggttcgattccctctagtgccaatttcg 27312242  T

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Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 19421230 - 19421321
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    ||||||||| ||||||| || |||||||||| |||||||| |||||||||||||  |||||||| ||||| || | ||||||| ||||||||    
T  19421230 acccatttggggttgacttagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatttcttctggtgtcaatttcg 19421321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 43785502 - 43785411
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttc 161  Q
    |||||||||| ||||||||||||||||||||| |||||||  || |||||||||  ||||||||| ||||| ||||| || |||| ||||||    
T  43785502 aacccatttggggttgacctaatggttggcttgggatctttgagattgctcctccaaaggtctcaagttcgattcccacttgtgctaatttc 43785411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 2344297 - 2344387
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||  ||| |||||  |||| |||| ||||||||||||||    
T  2344297 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaagctctcagattcgattccttctggtgccaattt 2344387  T

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Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 22696329 - 22696411
Alignment:
Q  81 ggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||| |||| ||||||  || |||||||| ||| ||||||||||||||||||| ||| | ||||||||||||||||||||||    
T  22696329 ggttggcctagtggttgatttgggatcttggagtgtgctcctctcaaggtctcaggtttgattccctctggtgccaatttcgg 22696411  T

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Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 185
Target Start/End: Original strand, 22703506 - 22703600
Alignment:
Q  92 tggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggc-aagttcatacaaagctt 185  Q
    |||||||||| |||||||| ||||||||||||   |||||||| ||||| |||||||||||| |||||||||  ||| |||| ||||||||||||    
T  22703506 tggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagctt 22703600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 13332622 - 13332533
Alignment:
Q  74 catttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| || || |||||||||| |||||||||||    
T  13332622 catttggggttggcctagtggttggcttgggatcttggagtttgctcctcctgaggtctcaggtacgattccctctggagccaatttcgg 13332533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 17197153 - 17197060
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||| | |||| ||||||| ||  ||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  17197153 aacccatttggggtcggcctagtggttggtttgcgatcttggagtttgctcctccataggtctcaagttcgattccctctggtgccaatttcgg 17197060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 17212051 - 17212144
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| | || |||||||||| |||||||| ||||||||||||   |||||||| ||||  ||| ||||||||||||||||||    
T  17212051 aacccatttggggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattctctctggtgccaatttcgg 17212144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 186
Target Start/End: Complemental strand, 21574305 - 21574189
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggtt-ccctctggtgccaatttcggcaggca 169  Q
    ||||||||| ||||| |||| ||||||| || |||| ||| ||| |||||||||||||||| || ||||| || |||| ||||||||| |||||  ||||    
T  21574305 acccatttggggttggcctagtggttggtttgggattttggagtgtgctcctctcaaggtcacaggttcgattcccctttggtgccaacttcggtgggca 21574206  T
Q  170 agttcatacaaagcttt 186  Q
    ||| |||||| ||||||    
T  21574205 agtccatacagagcttt 21574189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 42913716 - 42913624
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||||||||  ||||| |||| |||||||||| |||||||| |||||||||||||  |||||||| ||||| || | | ||||||||||||||    
T  42913716 aacccattttcggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatttcatatggtgccaatttcg 42913624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 153
Target Start/End: Complemental strand, 22264705 - 22264622
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtg 153  Q
    |||||||||| ||||| || || |||||| || | |||||| |||||||||||||||||||||||  |||| ||||||||||||    
T  22264705 aacccatttggggttggccgaagggttggtttggaatcttggagtttgctcctctcaaggtctcagattcgattccctctggtg 22264622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 185
Target Start/End: Original strand, 42814884 - 42814978
Alignment:
Q  92 tggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggc-aagttcatacaaagctt 185  Q
    |||||| ||| |||||||| |||||||||||||  | |||||| ||||| |||||||||||| |||||||||  ||| |||| ||||||||||||    
T  42814884 tggttgacttgggatcttggagtttgctcctcttgaagtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagctt 42814978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 19612690 - 19612645
Alignment:
Q  94 gttggcttaggatcttgaagtttgctcctctcaaggtctcatgttc 139  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  19612690 gttggcttgggatcttgaagtgtgctcctctcaaggtctcatgttc 19612645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 39145855 - 39145762
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| |||||||||| |||||| ||| |||||||| ||||||||||||   | ||||   ||||| |||||| |||||||||||||||    
T  39145855 aacccatttgaggttgacctagtggttgacttgggatcttggagtttgctcctccagatgtcttcggttcgattccctgtggtgccaatttcgg 39145762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 162
Target Start/End: Original strand, 40332096 - 40332189
Alignment:
Q  69 gaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||||||||||  ||||  ||| ||||||||||   |||||| ||||||||||||| ||||||||| ||||| || ||||||||| ||||||||    
T  40332096 gaacccatttggagttggtctagtggttggcttgaaatcttggagtttgctcctctaaaggtctcaggttcgatttcctctggtgtcaatttcg 40332189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 1469114 - 1469229
Alignment:
Q  74 catttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagtt 173  Q
    |||||| ||||| |||| |||||| |||   |||||| |||||| || ||||||||||||| ||||| || ||| |  |||||||||||   |||||||     
T  1469114 catttggggttggcctagtggttgacttgaaatcttggagtttgttcatctcaaggtctcaggttcgatttcctttaatgccaatttcgatgggcaagtc 1469213  T
Q  174 catacaaagctttact 189  Q
    ||||||||||||||||    
T  1469214 catacaaagctttact 1469229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 23854394 - 23854464
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcg 140  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| |||||    
T  23854394 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcg 23854464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 28089817 - 28089907
Alignment:
Q  73 ccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||| ||||| |||| ||||||||||  ||||||| ||||||||||||   | |||||| ||||| | |||||||||| |||||||||    
T  28089817 ccatttggggttggcctagtggttggcttgagatcttggagtttgctcctccagatgtctcaggttcgataccctctggtgtcaatttcgg 28089907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 654863 - 654814
Alignment:
Q  114 tttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||||  ||||||||| ||||| ||||||||||||||||||||||    
T  654863 tttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcgg 654814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 9718187 - 9718098
Alignment:
Q  73 ccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    ||||||| ||||| |||| |||||||| |  ||| ||| ||||||||||||  || |||||| ||||| |||||||||||| ||||||||    
T  9718187 ccatttgaggttggcctagtggttggcctgagatattggagtttgctcctccaaaagtctcaagttcgattccctctggtgtcaatttcg 9718098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 160
Target Start/End: Complemental strand, 29785349 - 29785285
Alignment:
Q  97 ggcttaggatcttgaagtttgctcctc-tcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    ||||| |||||| ||||| |||||||| ||||||||||||||||| |||  ||||||||||||||    
T  29785349 ggcttgggatctggaagtgtgctcctcctcaaggtctcatgttcgattctttctggtgccaattt 29785285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 158
Target Start/End: Complemental strand, 31713098 - 31713010
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaat 158  Q
    |||||||||| ||||| |||| ||||||| || |||||||| ||||||||||||   |||||||| | | | || ||||||||||||||    
T  31713098 aacccatttggggttggcctagtggttggtttgggatcttggagtttgctcctcgagaggtctcaggattgatttcctctggtgccaat 31713010  T

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Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 3950988 - 3950901
Alignment:
Q  74 catttgtggttgacctaatggttggctt-aggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    |||||| |||||  ||| |||||||||| || |||||| ||  |||||||||||| |||||||||||| |||||| |||||| |||||    
T  3950988 catttggggttggtctagtggttggcttgagaatcttggagcgtgctcctctcaatgtctcatgttcgattccctttggtgctaattt 3950901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 27704022 - 27704093
Alignment:
Q  92 tggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||||  |||||||||||||||||||    |||||||| ||||| || ||| |||||||||||||||    
T  27704022 tggttggcttgagatcttgaagtttgctcctacagaggtctcaggttcgatttcctttggtgccaatttcgg 27704093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 22638290 - 22638383
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| |||||  ||| |||||| |||  ||||||  ||||||||| |   ||||||||| ||||| ||||||||||||| ||||||||    
T  22638290 aacccatttggggttggtctagtggttgacttgagatcttagagtttgctctttcaaaggtctcaggttcgattccctctggtgctaatttcgg 22638383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 28003838 - 28003887
Alignment:
Q  74 catttgtggttgacctaatggttggcttaggatcttgaagtttgctcctc 123  Q
    |||||| |||||| ||| |||||||||| |||||||| ||||||||||||    
T  28003838 catttggggttgatctagtggttggcttgggatcttggagtttgctcctc 28003887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 16374033 - 16374085
Alignment:
Q  111 aagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||||||   ||||||||  |||| ||||||||||||||||||||||    
T  16374033 aagtttgctcctccagaggtctcagattcgattccctctggtgccaatttcgg 16374085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 29861725 - 29861761
Alignment:
Q  127 aggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  29861725 aggtctcaggttcgattccctctggtgccaatttcgg 29861761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 31273936 - 31274028
Alignment:
Q  94 gttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggc-aagttcatacaaagctt 185  Q
    |||| ||| |||||||| ||||||||||||   || ||||| ||||| |||||||||| || ||||||||| ||| |||| |||||| |||||    
T  31273936 gttgacttgggatcttggagtttgctcctccagagctctcaagttcgattccctctggagctaatttcggcgggctaagtccatacagagctt 31274028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 4e-25; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 15360302 - 15360208
Alignment:
Q  69 gaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||  ||||||||| ||||| ||||||||||||||||||||||    
T  15360302 gaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcgg 15360208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 179
Target Start/End: Original strand, 9208246 - 9208355
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggca 169  Q
    |||||||||| |||||  ||| ||||||| || |||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||||||||||  ||||    
T  9208246 aacccatttggggttgttctagtggttggattgggatcttggagtttgctcctctcaaggtctcaggttcgattccccctggtgccaatttcggtgggca 9208345  T
Q  170 agttcataca 179  Q
    ||| ||||||    
T  9208346 agtccataca 9208355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 9238969 - 9239062
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  9238969 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 9239062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 33499468 - 33499585
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttc-ggttccctctggtgccaatttcggcaggc 168  Q
    |||||||||| ||||| |||  |||||||||| |||||||| ||||||||||||||||||||||| |||| | |||||||||||| |||||||||  |||    
T  33499468 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcctctcaaggtctcaggttcagattccctctggtgtcaatttcggtgggc 33499567  T
Q  169 aagttcatacaaagcttt 186  Q
     ||| |||||||| ||||    
T  33499568 tagtccatacaaatcttt 33499585  T

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Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 12591631 - 12591722
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttc 161  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||  ||||||||| ||||| |||||||| |||||||||||    
T  12591631 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctcgtgccaatttc 12591722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 3222837 - 3222745
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  3222837 aacccatttggggttggcctagtggttggcttgggatcttgcagtttgctcctc-agaggtctcaggttcgattccctctggtgccaatttcgg 3222745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 17149637 - 17149550
Alignment:
Q  92 tggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcataca 179  Q
    ||||||| || |||||||| ||| ||||||||||||||||||| ||||| ||||||||||||| ||||||||  ||||||| ||||||    
T  17149637 tggttggtttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccctctggtgctaatttcggttggcaagtccataca 17149550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 74 - 160
Target Start/End: Original strand, 14212890 - 14212976
Alignment:
Q  74 catttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    |||||| | ||||||||||||||||||  |||||||| ||||||||||||   |||||||| ||||| |||||||||||||||||||    
T  14212890 catttgggattgacctaatggttggctcgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattt 14212976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 13753234 - 13753327
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||  ||| ||||||||||||||||||    
T  13753234 aacccatttggggttggcctagtggttggctttggatcttggagtttgctcctccagaggtctcaggttcaattctctctggtgccaatttcgg 13753327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 159
Target Start/End: Original strand, 22576061 - 22576150
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatt 159  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   ||||||||  |||| ||||||||||||||||||    
T  22576061 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccctctggtgccaatt 22576150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 34147340 - 34147433
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||| ||   | |||||| ||||| ||||||||||||||||||||||    
T  34147340 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctggtgccaatttcgg 34147433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 34159956 - 34160049
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||| ||   | |||||| ||||| ||||||||||||||||||||||    
T  34159956 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctggtgccaatttcgg 34160049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 185
Target Start/End: Original strand, 11007159 - 11007275
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggc- 168  Q
    |||||||||| |||||| ||| |||||||||| |||||||| ||||||||||||  ||||||||| ||||| ||| ||||| |  |||||||||  |||     
T  11007159 aacccatttggggttgatctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattcactctgctctcaatttcggtgggct 11007258  T
Q  169 aagttcatacaaagctt 185  Q
    |||| ||||||||||||    
T  11007259 aagtccatacaaagctt 11007275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 11448871 - 11448958
Alignment:
Q  76 tttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||| ||||||||||||||||||    
T  11448871 tttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcgg 11448958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 654349 - 654256
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| | ||| |||| ||| || ||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  654349 aacccatttgggtttggcctagtggctgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 654256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 21982521 - 21982432
Alignment:
Q  72 cccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttc 161  Q
    |||||||| ||||| |||| |||||||||| |||||||||||||||||||||   |||||| | ||||| |||||  |||||||||||||    
T  21982521 cccatttggggttggcctagtggttggcttgggatcttgaagtttgctcctccagaggtctgaggttcgattcccgatggtgccaatttc 21982432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 185
Target Start/End: Original strand, 1344934 - 1345045
Alignment:
Q  73 ccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggc-aag 171  Q
    ||||||| |||||||||| |||||||  | |||||||| |||||| |||||   |||||||| ||||| |||||||||||||||||||| |  ||| |||    
T  1344934 ccatttggggttgacctagtggttgg--tgggatcttggagtttgttcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggctaag 1345031  T
Q  172 ttcatacaaagctt 185  Q
    | ||||||||||||    
T  1345032 tccatacaaagctt 1345045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 28672061 - 28672151
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    |||||||||| ||||| |||| |||||| |||  ||||||| |||||||||||||  |||||| | ||||| |||||||||||| ||||||    
T  28672061 aacccatttggggttggcctagtggttgacttgagatcttggagtttgctcctctagaggtcttaggttcgattccctctggtgtcaattt 28672151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 17081257 - 17081164
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||   ||| ||||||||||||||||||| ||||||||||||   | |||||| ||| | |||||||||||| |||||||||    
T  17081257 aacccatttgaggttagtctagtggttggcttaggatcttggagtttgctcctccagatgtctcaagtttgattccctctggtgtcaatttcgg 17081164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 10377733 - 10377825
Alignment:
Q  94 gttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcatacaaagcttt 186  Q
    ||||||||  ||||||| ||| ||||| | ||||||||||| ||||  |||||| |||||||||||||||  ||||||| |||||| ||||||    
T  10377733 gttggcttgagatcttggagtgtgctcatgtcaaggtctcaggttcaattccctatggtgccaatttcggtgggcaagtccatacatagcttt 10377825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 9843935 - 9844022
Alignment:
Q  73 ccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    ||||||| |||||  ||| |||||||||| |||||||| |||||||||||||  |||||||| |||||  | ||||||||| ||||||    
T  9843935 ccatttggggttggtctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgacttcctctggtgtcaattt 9844022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 5360275 - 5360181
Alignment:
Q  69 gaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||||  |||| |||  |||||||||| |||||||| |||||||| |||   |||||||| ||||| ||||||||  ||||||||||||    
T  5360275 gaacccatttggagttggcctggtggttggcttgggatcttggagtttgcttctcaagaggtctcaggttcgattccctctaatgccaatttcgg 5360181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 6691588 - 6691532
Alignment:
Q  107 cttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||| ||| ||||||||||||||||||| ||||| ||| ||| ||||||||||||||    
T  6691588 cttggagtgtgctcctctcaaggtctcaggttcgattctctccggtgccaatttcgg 6691532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 3907546 - 3907625
Alignment:
Q  81 ggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    |||||| ||| ||||||| || ||||||||  || ||||||||||||| | ||| ||||| ||| |||||||||||||||    
T  3907546 ggttgatctagtggttggtttgggatcttggggtgtgctcctctcaagatttcaagttcgattctctctggtgccaattt 3907625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 163
Target Start/End: Original strand, 9583413 - 9583460
Alignment:
Q  116 tgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||||||||||||  ||||| ||| ||||||||||||||||||    
T  9583413 tgctcctctcaaggtctccagttcgattctctctggtgccaatttcgg 9583460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 28028578 - 28028623
Alignment:
Q  117 gctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||||||||||||||||||||||| ||| | ||| |||||||||||    
T  28028578 gctcctctcaaggtctcatgttcgattctccctgatgccaatttcg 28028623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 12390476 - 12390512
Alignment:
Q  127 aggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  12390476 aggtctcaggttcgattccctctggtgccaatttcgg 12390512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 17225737 - 17225777
Alignment:
Q  146 ctctggtgccaatttcggcaggcaagttcatacaaagcttt 186  Q
    ||||||||||||||||||| ||||||| |||||| ||||||    
T  17225737 ctctggtgccaatttcggcgggcaagtccatacagagcttt 17225777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 163
Target Start/End: Original strand, 21182325 - 21182413
Alignment:
Q  75 atttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||| |||||| || || |||||||| |||| ||| ||| ||||||||||||| ||| |  |||| |||||| || ||||||||||||    
T  21182325 atttggggttgatctgattgttggcttgggattttggagtgtgctcctctcaagctctgagattcgattccctgtgatgccaatttcgg 21182413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 4e-25; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 19145612 - 19145498
Alignment:
Q  72 cccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaag 171  Q
    |||||||| ||||| |||| |||||| ||| |||||||| ||| ||||||||||||||||||  ||||| ||||||||||||||||||||||  ||||||    
T  19145612 cccatttggggttggcctagtggttgacttgggatcttggagtatgctcctctcaaggtctccggttcgattccctctggtgccaatttcggtgggcaag 19145513  T
Q  172 ttcatacaaagcttt 186  Q
    | |||||| ||||||    
T  19145512 tccatacagagcttt 19145498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 27498934 - 27498841
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| |||||||||| |||||||||| | |||||| |||||||||||||  |||||||| ||||| ||||||||||||||||||||||    
T  27498934 aacccatttggggttgacctagtggttggcttggaatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcgg 27498841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 25586922 - 25587019
Alignment:
Q  66 actgaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| || |||||||||||||||||||    
T  25586922 actgaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggtgccaatttcgg 25587019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 31288149 - 31288056
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||  ||||| |||| |||||||||| |||||||| ||||||||||||  ||||||||||||||| |||||| |||||||||||||||    
T  31288149 aacccattttgggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcatgttcgattccctttggtgccaatttcgg 31288056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 32059643 - 32059550
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||  ||||||||| ||||| |||| |||||||||||||||||    
T  32059643 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcgg 32059550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 199
Target Start/End: Original strand, 36895419 - 36895548
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggca 169  Q
    |||||||||| | ||||| || || || |||| |||||||| ||| ||||||||||||||| ||||||||| ||||||||||| ||||||||||  | ||    
T  36895419 aacccatttgagattgacgtagtgattagcttgggatcttggagtgtgctcctctcaaggtttcatgttcgattccctctggtaccaatttcggtggtca 36895518  T
Q  170 agttcatacaaagctttactcgagcttaga 199  Q
    ||| ||||||||||||| |||  |||||||    
T  36895519 agtccatacaaagctttgctctggcttaga 36895548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 185
Target Start/End: Complemental strand, 8484861 - 8484748
Alignment:
Q  73 ccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggc-aag 171  Q
    ||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||| | ||||||||||||||||||||||  ||| |||    
T  8484861 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaatttcggtgggctaag 8484762  T
Q  172 ttcatacaaagctt 185  Q
    |||||||| |||||    
T  8484761 ttcatacagagctt 8484748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 33709703 - 33709611
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  33709703 aacccatttg-ggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcgg 33709611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 13038657 - 13038567
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    |||||||||| ||||| |||| ||||||| || |||||||| ||||||||||||   |||||||| ||||| |||||||||||||||||||    
T  13038657 aacccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattt 13038567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 13108652 - 13108562
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   || ||||| ||||| |||||||||||||||||||    
T  13108652 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctctggtgccaattt 13108562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 1827733 - 1827640
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| |||||||||| ||||||||||  ||||||| ||||||||||||   |||||||| ||||| ||||||||| | ||||||||||    
T  1827733 aacccatttggggttgacctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctgataccaatttcgg 1827640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 4603774 - 4603863
Alignment:
Q  73 ccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    ||||||| ||||| |||| |||||||||| |||||||| ||||||||||||  ||| ||||| ||||| |||| ||||||||||||||||    
T  4603774 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaagatctcaagttcgattccttctggtgccaatttcg 4603863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 11926705 - 11926612
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| ||||||| || |||||||| ||||||||||||   |||||||| ||| | ||||||||||||||||||||||    
T  11926705 aacccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttagattccctctggtgccaatttcgg 11926612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 15641308 - 15641215
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||  |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| |||||||||| |||||||||||    
T  15641308 aacccatttggggttagcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcgg 15641215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 164
Target Start/End: Original strand, 36954813 - 36954906
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggc 164  Q
    ||||||||| ||||| |||| |||||| ||| |||||||| |||||||||||||  |||||||| ||||| ||||||||||| | |||||||||    
T  36954813 acccatttggggttggcctagtggttgccttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggttctaatttcggc 36954906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 38631161 - 38631072
Alignment:
Q  73 ccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    ||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   ||||||||  |||| |||||||||||||||||||||    
T  38631161 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccctctggtgccaatttcg 38631072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 34310136 - 34310226
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    |||||||||| ||||| |||| |||| ||||| | |||||| ||||||||||||   |||||||| ||||| |||||||||||||||||||    
T  34310136 aacccatttggggttggcctagtggtcggcttggaatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattt 34310226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 23270725 - 23270632
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||| ||  ||||||||| ||||| || |||| | ||||||||||||    
T  23270725 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcatccaaaggtctcaagttcgatttcctccgatgccaatttcgg 23270632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 38684202 - 38684295
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||| ||| ||||| || | |||||| ||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  38684202 aacccacttggggttggcccagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 38684295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 150
Target Start/End: Original strand, 22392695 - 22392775
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctg 150  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| |||||||||    
T  22392695 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 22392775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 163
Target Start/End: Original strand, 15931052 - 15931146
Alignment:
Q  69 gaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctca-aggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||||| ||||| |||| ||||| |||| |||||||| |||||||| || ||| | |||||| ||||| ||||||||||||||||||||||    
T  15931052 gaacccatttggggttggcctagtggttagcttgggatcttggagtttgcttct-tcacaagtctcaggttcgattccctctggtgccaatttcgg 15931146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 160
Target Start/End: Original strand, 37495056 - 37495131
Alignment:
Q  85 gacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    |||||| ||||||||||  ||||||| ||||||||||||   |||||||| ||||| |||||||||||||||||||    
T  37495056 gacctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattt 37495131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 12398628 - 12398558
Alignment:
Q  93 ggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||| |||||||| ||||||||||||  ||||||||| ||||| |||||| ||||| |||||||||    
T  12398628 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctatggtgtcaatttcgg 12398558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 8780475 - 8780564
Alignment:
Q  73 ccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    ||||||| |||||||||| |||||| | | |||||||| ||| ||||||||||||||||||| ||||| ||  |||| ||| ||||||||    
T  8780475 ccatttgaggttgacctagtggttgacatcggatcttggagtgtgctcctctcaaggtctcaggttcgattgtctcttgtgtcaatttcg 8780564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 40330628 - 40330719
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    ||||||||| ||||| | || ||||| ||||  ||||||| ||||||||||||||||||||||| ||||  ||| || |||||| |||||||    
T  40330628 acccatttgaggttggcttagtggttagcttgagatcttggagtttgctcctctcaaggtctcaagttcaattctctatggtgctaatttcg 40330719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 19456389 - 19456320
Alignment:
Q  93 ggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||| |||||||| ||||||||||||   |||||||| |||| | |||||||||||||||||||||    
T  19456389 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttc-gatccctctggtgccaatttcgg 19456320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 30485822 - 30485915
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctca-aggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| || |  ||||||||| |||||||| ||||||||||| ||| |||||||| ||||| ||| |||||||| |||||||||    
T  30485822 aacccatttggggttggcccagcggttggcttgggatcttggagtttgctcct-tcagaggtctcaggttcgattcactctggtgtcaatttcgg 30485915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 185
Target Start/End: Complemental strand, 930685 - 930572
Alignment:
Q  73 ccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctc-tggtgccaatttcggcaggcaag 171  Q
    ||||||| ||||| || | ||||||||||  ||| ||  |||||||||||||||| |||||| ||||| ||||| | |||||||||||||||  | |||     
T  930685 ccatttggggttggcccagtggttggcttgagattttagagtttgctcctctcaaagtctcaggttcgattcccacttggtgccaatttcggtggacaaa 930586  T
Q  172 ttcatacaaagctt 185  Q
    |||||||| |||||    
T  930585 ttcatacatagctt 930572  T

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Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 12317353 - 12317260
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| | |||||| |||||||||||||  |||||||  ||| | || | ||||||| |||||||||    
T  12317353 aacccatttggggttggcctagtggttggcttggaatcttggagtttgctcctcttgaggtctcgggtttgatttcatctggtgtcaatttcgg 12317260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 5049131 - 5049223
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||||||||| ||||||| ||||| |||  || | |||||||||||||||  ||| |||||||||  |||  ||||||||||| |||||||||    
T  5049131 aacccatttggggttgacttaatgattgatttggaatcttgaagtttgcttttctaaaggtctcagattcaattccctctggtaccaatttcg 5049223  T

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Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 185
Target Start/End: Complemental strand, 11465110 - 11464994
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggc- 168  Q
    |||||||||  ||||| |||| || |||||||   |||||| ||||||||||||  || |||||| ||||| || |||||||||||||||| ||  |||     
T  11465110 aacccatttcgggttggcctagtgattggcttgaaatcttggagtttgctcctccaaatgtctcaggttcgatttcctctggtgccaattttggtgggct 11465011  T
Q  169 aagttcatacaaagctt 185  Q
    ||||||||||| |||||    
T  11465010 aagttcatacagagctt 11464994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 18207234 - 18207294
Alignment:
Q  103 ggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||| ||||||||||||   |||||||| ||||| ||||||| ||||||||||||||    
T  18207234 ggatcttggagtttgctcctccagaggtctcaggttcgattccctccggtgccaatttcgg 18207294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 10869734 - 10869675
Alignment:
Q  104 gatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||| ||||||||||||  ||||||||| ||||| |||| |||||| ||||||||||    
T  10869734 gatcttggagtttgctcctccaaaggtctcaggttcgattccatctggttccaatttcgg 10869675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 12647732 - 12647787
Alignment:
Q  68 tgaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctc 123  Q
    |||||||||||| |||||||||| ||||||| ||||||||||  ||||| ||||||    
T  12647732 tgaacccatttgaggttgacctagtggttggtttaggatctttgagtttactcctc 12647787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 15971303 - 15971232
Alignment:
Q  92 tggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| |||||||| ||||||||||||   |||||||| ||||| || |||||| || |||||||||    
T  15971303 tggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctgatgtcaatttcgg 15971232  T

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Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 146
Target Start/End: Complemental strand, 15485471 - 15485418
Alignment:
Q  93 ggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccc 146  Q
    ||||||||| ||| |||| ||| ||||||||||||||||||| ||||| |||||    
T  15485471 ggttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattccc 15485418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 25750811 - 25750719
Alignment:
Q  73 ccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcg--gttccctctggtgccaatttcgg 163  Q
    ||||||| ||||| |||| |||||| ||| |||||||| ||||||||||||   |||||||| ||| |   |||| |||||||||||||||||    
T  25750811 ccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaagttggatattccttctggtgccaatttcgg 25750719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 42193479 - 42193572
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||| | |||| |||| |||||| ||| |||||||| |||||||| | |   |||||||| ||||| || |||||| ||||||||||||    
T  42193479 aacccatttattgttggcctagtggttgacttgggatcttggagtttgcttccccagaggtctcaggttcgatttcctctgatgccaatttcgg 42193572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 33025474 - 33025538
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctca 134  Q
    |||||||||| ||||| |||   ||||||||| |||||||| ||| ||||||||||||| |||||    
T  33025474 aacccatttggggttggcctcgcggttggcttgggatcttggagtgtgctcctctcaagatctca 33025538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 34049815 - 34049891
Alignment:
Q  69 gaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttcc 145  Q
    ||||||||||| |||||  ||| | |||||||| |||||||| ||||||||||||   |||||||| ||||| ||||    
T  34049815 gaacccatttggggttgggctagtagttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 34049891  T

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Target: chr3 (Bit Score: 57; Significance: 7e-24; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 70 - 190
Target Start/End: Complemental strand, 4252599 - 4252479
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggca 169  Q
    |||||||||| ||||| |||| ||||||||||  ||||||| ||| ||||||||||||||||||| ||| | |||||||||||||||||||| |    ||    
T  4252599 aacccatttggggttggcctagtggttggcttgagatcttggagtgtgctcctctcaaggtctcaagtttgattccctctggtgccaatttcagtgatca 4252500  T
Q  170 agttcatacaaagctttactc 190  Q
    ||| |||||||||||||||||    
T  4252499 agtccatacaaagctttactc 4252479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 31538041 - 31537951
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    |||||||||| ||||| |||| ||||||||||||||||||| ||||||||||||   |||||||||||| | |||||||||||||||||||    
T  31538041 aacccatttggggttggcctagtggttggcttaggatcttggagtttgctcctccagaggtctcatgtttgattccctctggtgccaattt 31537951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 30807356 - 30807263
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  30807356 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 30807263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 35492905 - 35492998
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  35492905 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 35492998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 30257618 - 30257710
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||  ||||||||| ||||| |||||| ||||||||||||||    
T  30257618 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcg 30257710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 34492778 - 34492686
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||||||||| ||||||||| |||||||||||    
T  34492778 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctgctgccaatttcg 34492686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 68 - 163
Target Start/End: Complemental strand, 40133654 - 40133559
Alignment:
Q  68 tgaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||||| ||||| |||| |||||||||| |||| ||| ||||||||||||  ||||||||| ||||| |||||||||||| |||||||||    
T  40133654 tgaacccatttggggttggcctagtggttggcttgggattttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaatttcgg 40133559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 46576342 - 46576433
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttc 161  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||    
T  46576342 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 46576433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 70 - 177
Target Start/End: Complemental strand, 55371488 - 55371381
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggca 169  Q
    |||| ||||| ||||| |||| ||||||||||  ||| ||| ||| |||| |||||||||||||||||||| |||||| |||||||||||||||| | ||    
T  55371488 aacctatttgaggttggcctagtggttggcttgcgattttggagtatgcttctctcaaggtctcatgttcgattccctttggtgccaatttcggcggaca 55371389  T
Q  170 agttcata 177  Q
    ||||||||    
T  55371388 agttcata 55371381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 8456353 - 8456260
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||||| |||||||  ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  8456353 aacccatttggggttggcctagtggttggcttgggatcttcgagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 8456260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 40940819 - 40940912
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| |||||  ||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  40940819 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 40940912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 48977382 - 48977475
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||| ||| |||||||| ||||||||||||  ||||||||| ||||| |||| |||||||||||||||||    
T  48977382 aacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcgg 48977475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 185
Target Start/End: Original strand, 21362937 - 21363053
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggc- 168  Q
    |||||||||| ||||| |||| |||||| ||| |||||||| ||||||||||||   |||||||| ||||| |||||||||||| ||||||||| ||||     
T  21362937 aacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtaggct 21363036  T
Q  169 aagttcatacaaagctt 185  Q
    |||| |||||| |||||    
T  21363037 aagtccatacagagctt 21363053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 45529957 - 45529865
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| |||||||||| ||||||||||    
T  45529957 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcg 45529865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 163
Target Start/End: Complemental strand, 7485730 - 7485635
Alignment:
Q  68 tgaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||||| ||||| | || |||||| ||| |||||||| ||||||||||||  ||||||||| ||||| ||||||||| ||||||||||||    
T  7485730 tgaacccatttggggttggcatagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctgatgccaatttcgg 7485635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 36660762 - 36660833
Alignment:
Q  68 tgaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttc 139  Q
    ||||| |||||| |||||||||| ||||||| ||||||||||| ||||||||||||||||||||||| ||||    
T  36660762 tgaacgcatttggggttgacctagtggttggtttaggatcttggagtttgctcctctcaaggtctcaggttc 36660833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 163
Target Start/End: Complemental strand, 53424377 - 53424286
Alignment:
Q  72 cccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| |||||| |||||||||||||||    
T  53424377 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcgg 53424286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 25289917 - 25289824
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| |||||  ||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| |||||||| |||||||||||||    
T  25289917 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcgg 25289824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 49258465 - 49258372
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||  |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| |||||||| |||||||||||||    
T  49258465 aacccatttggggtttgcctagtggttggcttgggatcttgcagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcgg 49258372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 52455851 - 52455762
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    ||||||||| ||||| |||| |||||||||  |||||||| ||||||||||||   |||||||| ||||| |||||||||||||||||||    
T  52455851 acccatttggggttggcctagtggttggctagggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattt 52455762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 26108303 - 26108379
Alignment:
Q  87 cctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  26108303 cctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 26108379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 50582986 - 50583078
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||||||||| ||||| |||| ||||||| || |||||||| ||||||||||||| ||||| ||| ||||| || |||||| |||||||||||    
T  50582986 aacccatttggggttggcctagtggttggtttgggatcttggagtttgctcctcttaaggtttcaggttcgatttcctctgttgccaatttcg 50583078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 186
Target Start/End: Complemental strand, 51391041 - 51390926
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaa 170  Q
    ||||||||| || || |||| ||||||||||  ||||||  ||||||||||||||||| |||||  |||  |||||||| ||||||||||||| || |||    
T  51391041 acccatttgaggctgtcctagtggttggcttgagatcttagagtttgctcctctcaagatctcaatttcaattccctcttgtgccaatttcggtagacaa 51390942  T
Q  171 gttcatacaaagcttt 186  Q
    |  |||||||||||||    
T  51390941 gcccatacaaagcttt 51390926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 7470420 - 7470302
Alignment:
Q  68 tgaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcagg 167  Q
    |||||||||||| ||||  |||| |||||| |||  ||||||| ||||||||||||  ||||||||| ||||| ||||||||  ||||||||||||  ||    
T  7470420 tgaacccatttggggtttgcctagtggttgacttgagatcttggagtttgctcctccaaaggtctcaggttcgattccctctaatgccaatttcggtggg 7470321  T
Q  168 c-aagttcatacaaagctt 185  Q
    | ||||||||||| |||||    
T  7470320 ctaagttcatacagagctt 7470302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 15566701 - 15566609
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| ||||||||||  ||||||| ||||||||||||   |||||||| ||||| |||||||| |||||||||||||    
T  15566701 aacccatttg-ggttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcgg 15566609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 26174119 - 26174200
Alignment:
Q  82 gttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| || |||||||||||||||||||    
T  26174119 gttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggtgccaatttcgg 26174200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 29915472 - 29915379
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||  ||||||||||||||||| ||| |||||||| ||||||||||||   |||||||| ||||| || | |||||||||| ||||||    
T  29915472 aacccatttagggttgacctaatggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatttcttctggtgccattttcgg 29915379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 29964625 - 29964532
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||  ||||||||||||||||| ||| |||||||| ||||||||||||   |||||||| ||||| || | |||||||||| ||||||    
T  29964625 aacccatttagggttgacctaatggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatttcttctggtgccattttcgg 29964532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 45272619 - 45272526
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| | |||||||| |||||||| ||||||||||||   | ||||||  |||| ||||||||||||||||||||||    
T  45272619 aacccatttggggttggcctagtcgttggcttgggatcttggagtttgctcctccagatgtctcagtttcgattccctctggtgccaatttcgg 45272526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 52821826 - 52821745
Alignment:
Q  82 gttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||| |||| |||||| ||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  52821826 gttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 52821745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 163
Target Start/End: Original strand, 25379760 - 25379848
Alignment:
Q  75 atttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| |||| ||| |||||||||||||    
T  25379760 atttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccttctagtgccaatttcgg 25379848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 6041871 - 6041782
Alignment:
Q  74 catttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||| ||||| ||||||||||| |||   |||||| ||||||||||||||||||  ||||||||| || || || |||||||||||||    
T  6041871 catttggggttgccctaatggttgacttgaaatcttggagtttgctcctctcaaggagtcatgttcgattgcccctagtgccaatttcgg 6041782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 18177090 - 18176997
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||| |||  ||||||| ||||||||| ||   |||| ||| ||||| ||||||||||||||||||||||    
T  18177090 aacccatttggggttggcctagtggttgacttgagatcttggagtttgctcttccagaggtatcaggttcgattccctctggtgccaatttcgg 18176997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 53234091 - 53234020
Alignment:
Q  92 tggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| |||||||| ||||||||||||   | |||||| ||||| ||| ||||||||||||||||||    
T  53234091 tggttggcttgggatcttggagtttgctcctccagaagtctcaggttcgattctctctggtgccaatttcgg 53234020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 16140292 - 16140405
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaa 170  Q
    ||||||||| ||||| |||| || || | || |||||||| || ||||||||||||| |||||||||||| ||  |||| ||| |||||| ||  |||||    
T  16140292 acccatttggggttggcctagtgattagtttgggatcttggagcttgctcctctcaaagtctcatgttcgattttctctagtgtcaattttggtgggcaa 16140391  T
Q  171 gttcatacaaagct 184  Q
    || |||| ||||||    
T  16140392 gtccatataaagct 16140405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 26158836 - 26158905
Alignment:
Q  94 gttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||  ||||||| ||| ||||||||||||||||||| |||   |||||| |||||||||||||||    
T  26158836 gttggcttgagatcttggagtgtgctcctctcaaggtctcaggtttcattccctttggtgccaatttcgg 26158905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 32151419 - 32151511
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||| ||| |||||||| ||||||||||||  ||||| |||  |||| ||| |||| |||||||||||||    
T  32151419 aacccatttg-ggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtttcaaattcgattctctctagtgccaatttcgg 32151511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 39042027 - 39041962
Alignment:
Q  98 gcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||| |||||||| ||||||||||||   |||||||| ||||| ||| ||||||||||||||||||    
T  39042027 gcttgggatcttggagtttgctcctccagaggtctcaagttcgattctctctggtgccaatttcgg 39041962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 50162038 - 50162127
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    ||||||||| | |||||  | |||||| ||| ||||||||||||  ||||||||||||||||||  |||| ||||||||  |||||||||    
T  50162038 acccatttgggtttgactaagtggttgacttgggatcttgaagtgcgctcctctcaaggtctcagattcgattccctctattgccaattt 50162127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 51532783 - 51532876
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| |||||||||| | ||||| ||  ||| ||| |||||||| |||  ||||||||||||||| ||| ||||  ||||||||||||    
T  51532783 aacccatttggggttgacctattagttggtttgagattttggagtttgcttctccaaaggtctcatgttcgattctctctaatgccaatttcgg 51532876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 4462631 - 4462719
Alignment:
Q  74 catttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||||| ||||| |||| ||||||||||  ||||||| |||||||| ||   || |||||||||||| ||||||||||  |||||||||    
T  4462631 catttggggttggcctagtggttggcttgagatcttggagtttgctacttcaaaagtctcatgttcgattccctctggcaccaatttcg 4462719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 53863918 - 53863850
Alignment:
Q  94 gttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||||||| ||| |||| ||| ||||||||||||||||| | ||||  ||| |||||||||||||||||    
T  53863918 gttggcttgggaccttggagtgtgctcctctcaaggtcttaggttcaattctctctggtgccaatttcg 53863850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 160
Target Start/End: Original strand, 55287796 - 55287887
Alignment:
Q  69 gaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctca-aggtctcatgttcggttccctctggtgccaattt 160  Q
    ||||||||||| ||||| | || |||||||||| | |||||  ||||||||||| ||| |||| ||| ||||| |||||||||||||||||||    
T  55287796 gaacccatttggggttggcatagtggttggcttggaatcttagagtttgctcct-tcagaggtttcaggttcgattccctctggtgccaattt 55287887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 9853643 - 9853702
Alignment:
Q  103 ggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||||||| ||||||||||||  ||||||||| ||||| ||||| | |||||||||||||    
T  9853643 ggatcttggagtttgctcctccaaaggtctcaggttcgattcccaccggtgccaatttcg 9853702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 163
Target Start/End: Complemental strand, 50731438 - 50731344
Alignment:
Q  68 tgaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||| |||||||  || |||||| |||||| |||  ||||||||||| ||||||||||||||||||| ||| | |||| | |||| ||||||||||    
T  50731438 tgaatccatttggtgtcgacctagtggttgacttgagatcttgaagtgtgctcctctcaaggtctcaagtttgattccgt-tggtaccaatttcgg 50731344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 163
Target Start/End: Original strand, 50781416 - 50781510
Alignment:
Q  68 tgaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||| |||||||  || |||||| |||||| |||  ||||||||||| ||||||||||||||||||| ||| | |||| | |||| ||||||||||    
T  50781416 tgaatccatttggtgtcgacctagtggttgacttgagatcttgaagtgtgctcctctcaaggtctcaagtttgattccgt-tggtaccaatttcgg 50781510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 163
Target Start/End: Complemental strand, 53288873 - 53288822
Alignment:
Q  112 agtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||||||  ||||||||| | ||| ||||||||||||||||||||||    
T  53288873 agtttgctcctccaaaggtctcaggctcgattccctctggtgccaatttcgg 53288822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 2511443 - 2511385
Alignment:
Q  127 aggtctcatgttcggttccctctggtgccaatttcggcaggc-aagttcatacaaagct 184  Q
    |||||||| ||||| ||||||||||||||||||||||  ||| ||||||||||| ||||    
T  2511443 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagttcatacagagct 2511385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 10083999 - 10083929
Alignment:
Q  93 ggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||| |||||||| ||||||||||||   ||| |||| ||| | |||||||| |||||||||||||    
T  10083999 ggttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccctctagtgccaatttcgg 10083929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 10190922 - 10190852
Alignment:
Q  93 ggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||| |||||||| ||||||||||||   ||| |||| ||| | |||||||| |||||||||||||    
T  10190922 ggttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccctctagtgccaatttcgg 10190852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 35623317 - 35623271
Alignment:
Q  94 gttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcg 140  Q
    |||||||| ||| |||| ||| |||||||||||||||||||||||||    
T  35623317 gttggcttgggaccttggagtgtgctcctctcaaggtctcatgttcg 35623271  T

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Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 19857047 - 19857138
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||  |||||||||| |||||||| ||||||||||||   | |||||| ||||| |||||| ||||| |||||||||    
T  19857047 aacccatttg-ggttggcctggtggttggctt-ggatcttggagtttgctcctccagatgtctcaggttcgattccctttggtgtcaatttcgg 19857138  T

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Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 34844396 - 34844465
Alignment:
Q  94 gttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||  || |||| ||| ||||||||||||||||||| ||||| |||||||  | |||||||||||    
T  34844396 gttggcttgagaccttggagtgtgctcctctcaaggtctcaggttcgattccctccagagccaatttcgg 34844465  T

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Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 36803142 - 36803074
Alignment:
Q  94 gttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||||||||| |||||| ||| |||||||||||| |||||| ||||| || |||| ||||  |||||||    
T  36803142 gttggcttagaatcttggagtgtgctcctctcaaagtctcaagttcgatttcctccggtgttaatttcg 36803074  T

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Target: scaffold0070 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 163
Target Start/End: Original strand, 40318 - 40412
Alignment:
Q  69 gaacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctca-aggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||||| ||||| |||| ||||||||||||||||||| ||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||    
T  40318 gaacccatttggggttggcctagtggttggcttaggatcttggagtttgctcct-tcagaggtctcaggttcgattccctctggtgccaatttcgg 40412  T

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Target: scaffold0199 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 8610 - 8508
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggca 169  Q
    |||||||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| ||  ||||||||||||||||||  ||||    
T  8610 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattatctctggtgccaatttcggtgggca 8511  T
Q  170 agt 172  Q
    |||    
T  8510 agt 8508  T

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Target: scaffold0623 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 1255 - 1166
Alignment:
Q  74 catttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| |||||||||| |||||||||||    
T  1255 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcgg 1166  T

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Target: scaffold0366 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 9498 - 9409
Alignment:
Q  74 catttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| |||||||||| |||||||||||    
T  9498 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcgg 9409  T

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Target: scaffold0366; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 12199 - 12110
Alignment:
Q  74 catttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| || ||||||| |||||||||||    
T  12199 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggagccaatttcgg 12110  T

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Target: scaffold0049 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 66756 - 66846
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    |||||||||| | |||  ||| |||||||||| |||||||| ||||||||||||  ||||||||| ||||| |||| ||||||||||||||    
T  66756 aacccatttgggattggtctagtggttggcttgggatcttggagtttgctcctccaaaggtctcacgttcgattccttctggtgccaattt 66846  T

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Target: scaffold0028 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 27770 - 27860
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaattt 160  Q
    |||||||||| |||||  ||| ||||||| || |||| ||| ||||||||||||||||||||||  ||||| |||||| ||||||||||||    
T  27770 aacccatttggggttggtctagtggttggtttgggattttggagtttgctcctctcaaggtctcgggttcgattccctgtggtgccaattt 27860  T

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Target: scaffold0460 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 8382 - 8289
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| |||||   || |||||||||  |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  8382 aacccatttggggttggtttagtggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcgg 8289  T

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Target: scaffold0459 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 10892 - 10803
Alignment:
Q  74 catttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||| ||||| |||| |||||||||| |||||||| ||||||||||||   |||||||| ||||| || ||||||| |||||||||||    
T  10892 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggagccaatttcgg 10803  T

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Target: scaffold0328 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 14985 - 15078
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| |||||||| | |||||||| ||||||||||||   |||||||| ||||  ||||||||||||| ||||||||    
T  14985 aacccatttggggttggcctagtggttggcctgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgctaatttcgg 15078  T

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Target: scaffold0068 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 41847 - 41755
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcg 162  Q
    |||||||||| ||||| |||| |||||| ||| |||||||| ||||||||||||   |||||||| ||||| |||||||| || |||||||||    
T  41847 aacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctcttgttccaatttcg 41755  T

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Target: scaffold0051 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 53073 - 52981
Alignment:
Q  71 acccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||||| | ||| |||| |||||||||| |||||||| ||||||||||||   |||  ||| ||||| ||||||||||||||||||||||    
T  53073 acccatttgggattggcctagtggttggcttgggatcttggagtttgctcctccagaggcttcaggttcgattccctctggtgccaatttcgg 52981  T

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Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 161828 - 161896
Alignment:
Q  95 ttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    ||||||| |||||||| ||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  161828 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 161896  T

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Target: scaffold0217 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 7512 - 7419
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||| ||||| ||||| |||| | |||||||| |||||||| ||||||||||||   || ||||| ||||| ||||||| ||||||||||||||    
T  7512 aacctatttggggttggcctagtagttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctccggtgccaatttcgg 7419  T

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Target: scaffold0200 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 26746 - 26653
Alignment:
Q  70 aacccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||||| ||||| |||| ||||||||||||||||||| ||||||||  ||   |||||||||||| | ||| ||||  ||||||||||||    
T  26746 aacccatttggggttggcctactggttggcttaggatcttggagtttgcttttcaagaggtctcatgtttgattctctcttatgccaatttcgg 26653  T

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Target: scaffold0160 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 186
Target Start/End: Complemental strand, 29328 - 29229
Alignment:
Q  87 cctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcatacaaagcttt 186  Q
    |||| |||||||||| | |||||||||| || |||||||||||||| | ||||| ||||| ||| ||||| ||||||  || |||| |||||| ||||||    
T  29328 cctagtggttggcttggaatcttgaagtgtgttcctctcaaggtcttaggttcgattcccgctgatgccattttcggtcggtaagtccatacagagcttt 29229  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 123205 - 123146
Alignment:
Q  119 tcctctcaaggtctcatgttcggttccctctggtgccaatttcggcaggcaagttcatac 178  Q
    ||||||| || ||||||||||| ||||||||| ||||||||||||  ||||||| |||||    
T  123205 tcctctctagatctcatgttcgattccctctgttgccaatttcggtgggcaagtccatac 123146  T

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Target: scaffold0157 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 20249 - 20307
Alignment:
Q  103 ggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttc 161  Q
    |||||||| |||||||||||   ||||||||| ||| | ||||||||||||||||||||    
T  20249 ggatcttggagtttgctccttcaaaggtctcaggtttgattccctctggtgccaatttc 20307  T

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Target: scaffold0102 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 39143 - 39179
Alignment:
Q  127 aggtctcatgttcggttccctctggtgccaatttcgg 163  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  39143 aggtctcaagttcgattccctctggtgccaatttcgg 39179  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 240936 - 240892
Alignment:
Q  94 gttggcttaggatcttgaagtttgctcctctcaaggtctcatgtt 138  Q
    ||||| || |||||||| ||| |||||||||||||||||||||||    
T  240936 gttggtttgggatcttggagtatgctcctctcaaggtctcatgtt 240892  T

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