View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0814_low_59 (Length: 251)
Name: NF0814_low_59
Description: NF0814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0814_low_59 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 30 - 251
Target Start/End: Original strand, 41289287 - 41289508
Alignment:
| Q |
30 |
tctagagccgatatttgtactatttccctaacgacgtgactagctagttatccaaatttatgtccacttcttgcaataatacagaccacaaatccaaaat |
129 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
41289287 |
tctagagccgatatttgtactatttccctaacgacgtgactagctagttatccaaatttatgtccacttcttgcaataatacagaccacaaatcccaaat |
41289386 |
T |
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| Q |
130 |
agtatttttagggcataaataagaggctagctacttcctctgtttctaatataatttttctttaaaaaatagttctaaaatataagctttatttaaatta |
229 |
Q |
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| T |
41289387 |
agtatttttagggcataaataagaggctagctacttcctctgtttctaatataatttttctttaaaaaatagttctaaaatataagctttatttaaatta |
41289486 |
T |
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| Q |
230 |
caagtgagtgtatctgtttttt |
251 |
Q |
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|||||||||| ||||||||||| |
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| T |
41289487 |
caagtgagtgcatctgtttttt |
41289508 |
T |
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