View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0816_high_75 (Length: 278)

Name: NF0816_high_75
Description: NF0816
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0816_high_75
NF0816_high_75
[»] chr7 (1 HSPs)
chr7 (37-230)||(35259850-35260043)


Alignment Details
Target: chr7 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 37 - 230
Target Start/End: Original strand, 35259850 - 35260043
Alignment:
Q  37 atactcaaggcgctttcgcgattttatatttagaattttcactgaagagacttttgaaacctagaacatgattttgctattcctcaagtttatgttatca 136  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35259850 atactcgaggcgctttcgcgattttatatttagaattttcactgaagagacttttgaaacctagaacatgattttgctattcctcaagtttatgttatca 35259949  T
Q  137 tacttcatactttcannnnnnnnnnngtatagtacattatatatatgaacacattgtgaggaaactctgaaagcaggaggtactatatgtatat 230  Q
    |||||||||||||||           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35259950 tacttcatactttcatttttttttttgtatagtacattatatatatgaacacattgtgaggaaactctgaaagcaggaggtactatatgtatat 35260043  T

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