View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0816_low_127 (Length: 242)
Name: NF0816_low_127
Description: NF0816
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0816_low_127 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 11227051 - 11226960
Alignment:
| Q |
40 |
caaatacacttgaaaagcacaaccctcagcttaccatagtaatgaagttctaggatgtcatccaatttcccataatacatctcatcacttga |
131 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
11227051 |
caaacacacttgaaaagcacaaccctcagcttaccatagtaatcaagttctatgatgtcaaccaatttcccataatacatctcatcacttga |
11226960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 6766 times since January 2019
Visitors: 5771