View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
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Alignment Overview
Query: NF0816_low_53 (Length: 359)
Name: NF0816_low_53
Description: NF0816
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
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Alignment Details
Target: chr1 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 30 - 344
Target Start/End: Original strand, 35696724 - 35697038
Alignment:
| Q | 30 | acgatgagaagcatgccgatgtattcggagcttagttcttcggctgttgaatattatgatataacgaagcctaacaaacagaatcaaaactatgacaata | 129 | Q |
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| T | 35696724 | acgatgagaagcatgccgatgtattcggagcttagttcttcggctgttgaatattatgatataacgaagcctaacaaacagaatcaaaactatgacaata | 35696823 | T |
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| Q | 130 | acagtaattgtgatgccaagcatatgatgacgcttcaacgatcacaaagcgnnnnnnntgattcgacgattaatgattatgtttataatcctaatggaaa | 229 | Q |
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| T | 35696824 | acagtaattgtgatgccaagcatatgatgacgcttcaacgatcacaaagcgaaaaaaatgattcgacgattaatgattatgtttataatcctaatggaaa | 35696923 | T |
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| Q | 230 | aaacggttacggtggtgaatgtgagtctgaaattagtgttcctactgggaagaaaggtgtgatcgtgaacgcgaatggatcgttgtgttcggatgttgga | 329 | Q |
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| T | 35696924 | aaacggttacggtggtgaatgtgagtctgaaattagtgttcctactgggaagaaaggtgtgatcgtgaacgcgaatggatcgttgtgttcggatgttgga | 35697023 | T |
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| Q | 330 | ccttcaccgtctgtg | 344 | Q |
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| T | 35697024 | ccttcaccgtctgtg | 35697038 | T |
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