View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0816_low_89 (Length: 278)
Name: NF0816_low_89
Description: NF0816
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0816_low_89 |
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Alignment Details
Target: chr7 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 37 - 230
Target Start/End: Original strand, 35259850 - 35260043
Alignment:
| Q |
37 |
atactcaaggcgctttcgcgattttatatttagaattttcactgaagagacttttgaaacctagaacatgattttgctattcctcaagtttatgttatca |
136 |
Q |
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| T |
35259850 |
atactcgaggcgctttcgcgattttatatttagaattttcactgaagagacttttgaaacctagaacatgattttgctattcctcaagtttatgttatca |
35259949 |
T |
|
| Q |
137 |
tacttcatactttcannnnnnnnnnngtatagtacattatatatatgaacacattgtgaggaaactctgaaagcaggaggtactatatgtatat |
230 |
Q |
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| T |
35259950 |
tacttcatactttcatttttttttttgtatagtacattatatatatgaacacattgtgaggaaactctgaaagcaggaggtactatatgtatat |
35260043 |
T |
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