View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0818_high_11 (Length: 501)

Name: NF0818_high_11
Description: NF0818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0818_high_11
NF0818_high_11
[»] chr1 (17 HSPs)
chr1 (74-495)||(14816847-14817260)
chr1 (131-448)||(1958581-1958897)
chr1 (235-494)||(6200775-6201022)
chr1 (175-495)||(35072340-35072653)
chr1 (243-495)||(19372031-19372281)
chr1 (235-495)||(22430720-22430978)
chr1 (230-493)||(2339132-2339388)
chr1 (208-386)||(13467493-13467667)
chr1 (208-386)||(13472487-13472661)
chr1 (4-68)||(35286055-35286119)
chr1 (208-386)||(31555836-31556009)
chr1 (140-290)||(1065182-1065335)
chr1 (243-384)||(31543769-31543908)
chr1 (243-386)||(2388421-2388561)
chr1 (465-494)||(31543977-31544006)
chr1 (465-494)||(31556077-31556106)
chr1 (467-495)||(1958898-1958926)
[»] chr8 (14 HSPs)
chr8 (74-495)||(32002855-32003284)
chr8 (230-495)||(21479189-21479450)
chr8 (192-495)||(25856317-25856612)
chr8 (156-495)||(20741735-20742076)
chr8 (156-495)||(20736866-20737207)
chr8 (156-495)||(20745424-20745765)
chr8 (175-493)||(22160132-22160448)
chr8 (306-497)||(22092458-22092646)
chr8 (243-384)||(17679163-17679302)
chr8 (245-385)||(6666793-6666935)
chr8 (243-384)||(39841814-39841953)
chr8 (243-377)||(24703006-24703137)
chr8 (343-386)||(16767372-16767415)
chr8 (465-494)||(17679067-17679096)
[»] scaffold0600 (1 HSPs)
scaffold0600 (74-495)||(9082-9491)
[»] scaffold0001 (1 HSPs)
scaffold0001 (74-493)||(99551-99968)
[»] scaffold0202 (1 HSPs)
scaffold0202 (74-495)||(24330-24748)
[»] chr4 (25 HSPs)
chr4 (74-497)||(20557025-20557457)
chr4 (175-495)||(3385538-3385856)
chr4 (230-498)||(22708162-22708427)
chr4 (240-386)||(16364999-16365145)
chr4 (175-385)||(9187604-9187821)
chr4 (243-497)||(16723844-16724094)
chr4 (243-495)||(14874148-14874395)
chr4 (326-497)||(3831874-3832042)
chr4 (243-495)||(15570777-15571023)
chr4 (243-495)||(15574905-15575151)
chr4 (196-386)||(12512228-12512418)
chr4 (243-386)||(14921598-14921742)
chr4 (74-213)||(8660590-8660717)
chr4 (406-497)||(3360691-3360783)
chr4 (243-328)||(15898717-15898801)
chr4 (243-387)||(26216823-26216963)
chr4 (243-385)||(3360520-3360662)
chr4 (243-386)||(8099327-8099468)
chr4 (212-320)||(12509308-12509415)
chr4 (406-485)||(12509176-12509255)
chr4 (406-497)||(16365163-16365244)
chr4 (465-497)||(14921798-14921830)
chr4 (406-493)||(9187845-9187934)
chr4 (343-385)||(1883261-1883303)
chr4 (465-494)||(26216718-26216747)
[»] scaffold0357 (1 HSPs)
scaffold0357 (75-497)||(9435-9864)
[»] chr7 (30 HSPs)
chr7 (156-495)||(15769942-15770279)
chr7 (230-495)||(42634269-42634530)
chr7 (230-495)||(8814449-8814710)
chr7 (230-497)||(23882587-23882852)
chr7 (175-497)||(34136096-34136424)
chr7 (175-493)||(13267750-13268065)
chr7 (235-386)||(3427795-3427946)
chr7 (243-387)||(27972912-27973054)
chr7 (230-495)||(842570-842824)
chr7 (230-495)||(849746-850000)
chr7 (230-495)||(1207750-1208004)
chr7 (243-497)||(12587673-12587924)
chr7 (196-497)||(16269294-16269605)
chr7 (406-495)||(3427668-3427757)
chr7 (195-386)||(565801-565989)
chr7 (243-385)||(5205779-5205919)
chr7 (208-386)||(38413397-38413573)
chr7 (243-385)||(27437794-27437934)
chr7 (282-494)||(16486061-16486273)
chr7 (243-385)||(4944519-4944659)
chr7 (243-384)||(13835228-13835367)
chr7 (243-385)||(29025984-29026123)
chr7 (208-298)||(1958037-1958126)
chr7 (343-386)||(1894620-1894663)
chr7 (465-494)||(565702-565731)
chr7 (465-494)||(4944422-4944451)
chr7 (465-494)||(27438003-27438032)
chr7 (465-494)||(27972809-27972838)
chr7 (465-494)||(29026193-29026222)
chr7 (465-494)||(38413640-38413669)
[»] chr6 (36 HSPs)
chr6 (156-495)||(1546012-1546349)
chr6 (230-495)||(619154-619415)
chr6 (235-497)||(27514175-27514434)
chr6 (230-497)||(16820803-16821066)
chr6 (131-448)||(22326640-22326955)
chr6 (175-386)||(19716417-19716627)
chr6 (173-384)||(27071368-27071579)
chr6 (175-495)||(18946413-18946744)
chr6 (230-495)||(24146704-24146962)
chr6 (243-495)||(20456027-20456279)
chr6 (240-495)||(20053820-20054071)
chr6 (175-497)||(22776177-22776513)
chr6 (247-497)||(18437692-18437939)
chr6 (235-340)||(20044037-20044142)
chr6 (230-382)||(18912381-18912531)
chr6 (406-495)||(20043898-20043987)
chr6 (406-495)||(27071242-27071331)
chr6 (208-384)||(5990187-5990363)
chr6 (190-386)||(28355893-28356094)
chr6 (190-386)||(28307087-28307289)
chr6 (243-386)||(27054966-27055108)
chr6 (243-387)||(16638001-16638143)
chr6 (208-386)||(15649708-15649883)
chr6 (208-385)||(16582927-16583101)
chr6 (208-385)||(16612279-16612453)
chr6 (343-386)||(27543949-27543992)
chr6 (453-495)||(15649604-15649646)
chr6 (305-385)||(25502723-25502801)
chr6 (465-494)||(5990430-5990459)
chr6 (465-494)||(16583175-16583204)
chr6 (465-494)||(16612176-16612205)
chr6 (465-494)||(16638211-16638240)
chr6 (465-494)||(27054888-27054917)
chr6 (465-494)||(28307360-28307389)
chr6 (465-494)||(28356165-28356194)
chr6 (467-495)||(22326956-22326984)
[»] scaffold0155 (1 HSPs)
scaffold0155 (173-497)||(19653-19974)
[»] chr2 (22 HSPs)
chr2 (107-497)||(24693119-24693498)
chr2 (74-497)||(24702070-24702490)
chr2 (175-497)||(20278075-20278399)
chr2 (208-386)||(30689540-30689714)
chr2 (243-385)||(3762666-3762805)
chr2 (243-385)||(16277292-16277432)
chr2 (243-384)||(35142431-35142570)
chr2 (243-386)||(24288938-24289082)
chr2 (243-386)||(42570745-42570886)
chr2 (208-384)||(15949270-15949448)
chr2 (243-384)||(20614548-20614687)
chr2 (243-386)||(21856201-21856342)
chr2 (343-386)||(26725423-26725466)
chr2 (318-386)||(25498514-25498583)
chr2 (465-494)||(15949172-15949201)
chr2 (465-494)||(16277502-16277531)
chr2 (465-494)||(21856105-21856134)
chr2 (465-494)||(25498632-25498661)
chr2 (465-494)||(30689436-30689465)
chr2 (465-494)||(35142639-35142668)
chr2 (243-385)||(21116838-21116978)
chr2 (465-493)||(24289149-24289177)
[»] scaffold0138 (1 HSPs)
scaffold0138 (156-497)||(11315-11651)
[»] chr5 (30 HSPs)
chr5 (240-495)||(7257964-7258216)
chr5 (173-496)||(21691748-21692069)
chr5 (235-495)||(12391231-12391483)
chr5 (140-497)||(25529354-25529702)
chr5 (232-495)||(7790829-7791088)
chr5 (235-495)||(1802134-1802387)
chr5 (175-497)||(20096644-20096978)
chr5 (175-493)||(36451007-36451331)
chr5 (243-497)||(37581646-37581893)
chr5 (244-493)||(29897499-29897758)
chr5 (208-386)||(20380764-20380938)
chr5 (235-495)||(22954683-22954942)
chr5 (243-385)||(33841558-33841697)
chr5 (208-385)||(27230261-27230434)
chr5 (208-387)||(11810052-11810227)
chr5 (208-387)||(12177206-12177381)
chr5 (195-386)||(26085977-26086165)
chr5 (243-384)||(24961412-24961551)
chr5 (243-385)||(21864058-21864200)
chr5 (243-386)||(28847624-28847765)
chr5 (305-386)||(23639998-23640078)
chr5 (305-386)||(23832808-23832888)
chr5 (465-494)||(11809957-11809986)
chr5 (465-494)||(12177110-12177139)
chr5 (465-494)||(20381015-20381044)
chr5 (465-494)||(23640145-23640174)
chr5 (465-494)||(23832712-23832741)
chr5 (465-494)||(24961315-24961344)
chr5 (465-494)||(26085873-26085902)
chr5 (243-385)||(21992463-21992603)
[»] scaffold0068 (1 HSPs)
scaffold0068 (173-496)||(21841-22162)
[»] chr3 (39 HSPs)
chr3 (173-496)||(15623621-15623945)
chr3 (230-495)||(6198412-6198670)
chr3 (175-493)||(70903-71217)
chr3 (175-497)||(8608944-8609279)
chr3 (175-491)||(30092859-30093170)
chr3 (230-497)||(8808534-8808798)
chr3 (186-497)||(11184135-11184444)
chr3 (175-497)||(33568619-33568938)
chr3 (235-495)||(30017083-30017341)
chr3 (235-495)||(14421576-14421836)
chr3 (230-497)||(21611964-21612232)
chr3 (235-495)||(15533129-15533382)
chr3 (140-495)||(12476092-12476450)
chr3 (175-493)||(23285134-23285452)
chr3 (175-493)||(13108795-13109110)
chr3 (235-495)||(3680514-3680785)
chr3 (229-495)||(8620449-8620708)
chr3 (140-340)||(14884513-14884723)
chr3 (235-495)||(46396501-46396754)
chr3 (175-493)||(12557791-12558115)
chr3 (243-387)||(15681281-15681422)
chr3 (406-497)||(3408000-3408091)
chr3 (208-385)||(25267263-25267437)
chr3 (243-385)||(10718903-10719043)
chr3 (243-384)||(41002108-41002247)
chr3 (243-384)||(41010890-41011029)
chr3 (230-386)||(26383380-26383535)
chr3 (243-363)||(27884274-27884391)
chr3 (247-386)||(3241615-3241752)
chr3 (243-382)||(14395146-14395284)
chr3 (349-387)||(14663493-14663531)
chr3 (443-497)||(14884445-14884498)
chr3 (465-494)||(14663396-14663425)
chr3 (465-494)||(15681177-15681206)
chr3 (208-378)||(17929581-17929744)
chr3 (465-494)||(25267519-25267548)
chr3 (465-494)||(41002316-41002345)
chr3 (465-494)||(41011098-41011127)
chr3 (235-328)||(5952037-5952132)
[»] scaffold0114 (1 HSPs)
scaffold0114 (173-495)||(30668-30987)
[»] scaffold0362 (2 HSPs)
scaffold0362 (158-386)||(746-969)
scaffold0362 (406-497)||(642-729)
[»] scaffold0327 (1 HSPs)
scaffold0327 (230-493)||(14968-15232)
[»] scaffold0435 (1 HSPs)
scaffold0435 (230-495)||(11692-11950)
[»] scaffold0320 (1 HSPs)
scaffold0320 (175-497)||(3340-3665)
[»] scaffold0441 (1 HSPs)
scaffold0441 (243-497)||(7211-7466)
[»] scaffold0306 (1 HSPs)
scaffold0306 (195-493)||(18399-18693)
[»] scaffold0243 (3 HSPs)
scaffold0243 (145-284)||(17658-17796)
scaffold0243 (406-495)||(17871-17960)
scaffold0243 (329-386)||(17796-17854)
[»] scaffold1197 (1 HSPs)
scaffold1197 (230-495)||(32-293)
[»] scaffold0014 (3 HSPs)
scaffold0014 (230-497)||(743-1005)
scaffold0014 (406-495)||(183209-183298)
scaffold0014 (243-294)||(183409-183460)
[»] scaffold0132 (1 HSPs)
scaffold0132 (230-493)||(32085-32339)
[»] scaffold0019 (1 HSPs)
scaffold0019 (280-495)||(16618-16828)
[»] scaffold0582 (1 HSPs)
scaffold0582 (230-497)||(4286-4544)
[»] scaffold0183 (1 HSPs)
scaffold0183 (235-497)||(32548-32806)
[»] scaffold0084 (1 HSPs)
scaffold0084 (75-188)||(33172-33285)
[»] scaffold0004 (2 HSPs)
scaffold0004 (251-387)||(191401-191537)
scaffold0004 (406-495)||(191292-191381)
[»] scaffold0029 (2 HSPs)
scaffold0029 (243-450)||(75417-75624)
scaffold0029 (445-496)||(89001-89052)
[»] scaffold0157 (3 HSPs)
scaffold0157 (196-386)||(8489-8679)
scaffold0157 (212-320)||(11062-11169)
scaffold0157 (406-485)||(11222-11301)
[»] scaffold0551 (2 HSPs)
scaffold0551 (406-495)||(9264-9352)
scaffold0551 (230-297)||(9354-9420)
[»] scaffold0125 (1 HSPs)
scaffold0125 (243-497)||(12489-12741)
[»] scaffold0009 (1 HSPs)
scaffold0009 (140-382)||(152900-153143)
[»] scaffold0015 (1 HSPs)
scaffold0015 (243-386)||(165950-166093)
[»] scaffold1661 (1 HSPs)
scaffold1661 (445-496)||(511-562)
[»] scaffold0005 (1 HSPs)
scaffold0005 (247-497)||(302241-302480)
[»] scaffold0044 (2 HSPs)
scaffold0044 (208-385)||(70724-70899)
scaffold0044 (465-494)||(70624-70653)
[»] scaffold0605 (2 HSPs)
scaffold0605 (208-384)||(4887-5063)
scaffold0605 (465-494)||(4790-4819)
[»] scaffold0027 (2 HSPs)
scaffold0027 (280-384)||(59686-59788)
scaffold0027 (465-494)||(59589-59618)
[»] scaffold0031 (1 HSPs)
scaffold0031 (194-378)||(28502-28688)
[»] scaffold0002 (2 HSPs)
scaffold0002 (250-384)||(125564-125696)
scaffold0002 (465-494)||(125765-125794)
[»] scaffold0545 (1 HSPs)
scaffold0545 (343-386)||(211-254)
[»] scaffold0598 (1 HSPs)
scaffold0598 (265-352)||(4242-4331)
[»] scaffold0083 (1 HSPs)
scaffold0083 (465-494)||(19582-19611)
[»] scaffold0023 (1 HSPs)
scaffold0023 (465-494)||(142424-142453)
[»] scaffold0016 (1 HSPs)
scaffold0016 (465-494)||(19651-19680)


Alignment Details
Target: chr1 (Bit Score: 259; Significance: 1e-144; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 74 - 495
Target Start/End: Complemental strand, 14817260 - 14816847
Alignment:
Q  74 gcttttcgaaggttgaattcagacacgcaagataatccactaacgggttatattccttggtattgcgacacatggggtggtcagccgtaattggaccgtt 173  Q
    |||||||||||||||||||||||| |||||||||||||| |  ||||||||||||| |||||||||||||||| | ||||| ||||||||||||  ||||    
T  14817260 gcttttcgaaggttgaattcagacgcgcaagataatccattgccgggttatattccctggtattgcgacacatagagtggttagccgtaattgggtcgtt 14817161  T
Q  174 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaa 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||| ||||||||||||||||||||||||||||||||||    
T  14817160 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgcttgtcgcttttcaaaaaaacatcctttcgtcccgcccgagatgaaagtgaa 14817061  T
Q  274 ctggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttggaaaatg 372  Q
    || |||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||| ||||  ||||| ||||||||||||||||||    
T  14817060 cttgtgtagggttttttgctttaag-aattgtcatcattaataaaaaggtcgttttgatctcgactttg-ttttcattttgcgctttttcttggaaaatg 14816963  T
Q  373 gtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataataaatcatg 472  Q
    |||||||||||||   ||          ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  14816962 gtaatacaaaaaaaccaa-------aaaaataaaatcattctcaaatgtctgcataatcataactttcatttagttgtcaaaaatcaataataactcatg 14816870  T
Q  473 cattaataaacccgttgaacaca 495  Q
    |||||||||||||||||||||||    
T  14816869 cattaataaacccgttgaacaca 14816847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 131 - 448
Target Start/End: Original strand, 1958581 - 1958897
Alignment:
Q  131 tggtattgcgacacatggggtggtcagccgtaattggaccgttgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtt 230  Q
    |||||||||||||||||| ||||| ||||||||||||  || |||||||||||||||| ||||||||||||||||||||||||||||||||||||  | |    
T  1958581 tggtattgcgacacatggagtggttagccgtaattgggtcgctgttgacgttccttccactactttttgttcaaataatgtttgtttgttgctttttgat 1958680  T
Q  231 tttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaa-ggtcg-ttt 328  Q
    |||||||| || |||||||||||||| ||||||||||||  |||| || |||||| |||||||| ||| | ||  |||||||||||||||  |||| |||    
T  1958681 tttcaaaa-aaaatcctttcgtcccgtccgagatgaaagcaaacttgtttagggcattttgcttcaagcattttccatcattaataaaaatagtcgtttt 1958779  T
Q  329 gatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcata 428  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||| ||         |  |  |||||||||||||| ||||||||    
T  1958780 gatcccgactttg-ttttcattttgtgctttttcttggaaaatggtaatacaaaaaaca-aaaaaaaattcttctttaatcattctcaaatatctgcata 1958877  T
Q  429 atcataactttcatttactt 448  Q
    ||||||||||||||||||||    
T  1958878 atcataactttcatttactt 1958897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 235 - 494
Target Start/End: Complemental strand, 6201022 - 6200775
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcc 333  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  6201022 aaaaaaacatcctctcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag-aattgtcatcattaataaaaaggtcgctttgatcc 6200924  T
Q  334 cgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcat 433  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||                || |||||||||||||||| |||||||||||||    
T  6200923 cgactttgctttt-gttttgtgctttttcttggaaaatggtaatacaaaaa-----------ggcaaaaaaaaatcattctcaaatatctgcataatcat 6200836  T
Q  434 aactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacac 494  Q
    ||| |  | ||||||||| |||||| ||||| ||||||||||||||||||||||||||||||    
T  6200835 aacctatacttacttgtc-aaaatcaataatcaaatcatgcattaataaacccgttgaacac 6200775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 175 - 495
Target Start/End: Original strand, 35072340 - 35072653
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaac 274  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||| |  |||||||| ||||||||||||||||||||| ||| ||||||||||    
T  35072340 ttgacgttccttccaccactttttgttcaaataatgtttgtttgttgcttttctcttttcaaa-gaacatcctttcgtcccgcccaagacgaaagtgaac 35072438  T
Q  275 tggtgtagggctttttgctttaagaaattgtcatcattaataaaaag--gtcgt-ttgatcccgactttgcttttatttttgtgctttttcttggaaaat 371  Q
    |  ||||||||| ||||||| | ||| ||||||||||||||||||||  ||||| ||||||||||| |||||||||||||  |||| | |  || |||||    
T  35072439 ttatgtagggctctttgcttcatgaa-ttgtcatcattaataaaaagaagtcgtcttgatcccgaccttgcttttatttta-tgctctcttctgaaaaat 35072536  T
Q  372 ggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgat-aataaatca 470  Q
    |||||||||||||||  ||         ||||  ||||||| |||||| ||||||||||||||||||  | ||||||||| |||||| || |||||||||    
T  35072537 ggtaatacaaaaaacccaa-----aaaataat--aatcattttcaaatatctgcataatcataacttgtacttacttgtc-aaaatcaataaataaatca 35072628  T
Q  471 tgcattaataaacccgttgaacaca 495  Q
    |||||||||||||||||||||||||    
T  35072629 tgcattaataaacccgttgaacaca 35072653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 243 - 495
Target Start/End: Original strand, 19372031 - 19372281
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttg 341  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||    
T  19372031 atcctttcgtcccgcccgagatgaaagtgaacttgtgtagggctttttgctttaag-aattgtcatcattaataaaaaggtcgttttgatccctactttg 19372129  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttca 441  Q
     ||||  |||||||||| |||||||||||||||||||||||||||  ||         |  |  ||||||| |||||| ||||||||||||||||||  |    
T  19372130 -ttttcattttgtgcttcttcttggaaaatggtaatacaaaaaac-caaaaaaaatatttctttaatcattgtcaaatatctgcataatcataacttata 19372227  T
Q  442 tttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacaca 495  Q
     ||||||||| |||||| ||||| |||||||||||||||||||| ||||||||||    
T  19372228 cttacttgtc-aaaatcaataatcaaatcatgcattaataaacctgttgaacaca 19372281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 235 - 495
Target Start/End: Original strand, 22430720 - 22430978
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcc 333  Q
    |||| |||||||||||||| |||| || ||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  22430720 aaaaaaacatcctttcgtctcgcctgatatgaaagtgaactggtgtaggactttttgctttaag-aattgtcattattaataaaaaggtcgttttgatcc 22430818  T
Q  334 cgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaa-cagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatca 432  Q
    ||  |||| ||||| |||||||||| ||||||||||||| |||||||||||| || ||         |  |  |||||||||||||| ||||||||||||    
T  22430819 cgtttttgttttta-ttttgtgcttcttcttggaaaatgataatacaaaaaatcaaaa--aaaattattctttaatcattctcaaatatctgcataatca 22430915  T
Q  433 taactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacaca 495  Q
    ||||||  | |||| |||| |||||| ||||| |||||||||||| ||||||||||||||||||    
T  22430916 taacttgtacttacctgtc-aaaatcaataatcaaatcatgcattgataaacccgttgaacaca 22430978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 230 - 493
Target Start/End: Complemental strand, 2339388 - 2339132
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaat--aaaaaggtcgt- 326  Q
    ||||||||||||  |||||||||||||||| ||| |||||||||||  ||||||||| ||||||| | | |||||| |||||||||  |||||||||||     
T  2339388 ttttcaaaagaa--tcctttcgtcccgcccaagacgaaagtgaacttatgtagggctctttgcttcatg-aattgttatcattaataaaaaaaggtcgtc 2339292  T
Q  327 ttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgca 426  Q
    ||||||||||| ||||||||| |||| |||| |||  || ||||||||||||||||||||  ||         ||||  ||||||||||| || ||||||    
T  2339291 ttgatcccgaccttgctttta-ttttatgctcttttctgaaaaatggtaatacaaaaaacccaa----aaaaataat--aatcattctcatatatctgca 2339199  T
Q  427 taatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaaca 493  Q
    |||||||| |||  | ||||||||| |||||| ||||| |||||||||||||||||||||||||||||    
T  2339198 taatcatagcttgtacttacttgtc-aaaatcaataatcaaatcatgcattaataaacccgttgaaca 2339132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 208 - 386
Target Start/End: Original strand, 13467493 - 13467667
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||||||| || ||||||||||||| ||||||  ||||||||| | || ||||||||||||||||| |  ||| |||    
T  13467493 atgtttgtttgttgctttatgtttttcaaaaaaa-atcctttcgtcccacccgaggcgaaagtgaatttgtttagggctttttgctttatg-tattttca 13467590  T
Q  308 tcattaataaaaaggtcgt-ttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    ||||||||  ||||||||| ||||||||||| ||| ||||| ||||||||||||||| | ||||||||||||||||||||    
T  13467591 tcattaat-gaaaggtcgtcttgatcccgaccttg-tttta-ttttgtgctttttctggaaaaatggtaatacaaaaaac 13467667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 208 - 386
Target Start/End: Original strand, 13472487 - 13472661
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||||||| || ||||||||||||| ||||||  ||||||||| | || ||||||||||||||||| |  ||| |||    
T  13472487 atgtttgtttgttgctttatgtttttcaaaaaaa-atcctttcgtcccacccgaggcgaaagtgaatttgtttagggctttttgctttatg-tattttca 13472584  T
Q  308 tcattaataaaaaggtcgt-ttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    ||||||||  ||||||||| ||||||||||| ||| ||||| ||||||||||||||| | ||||||||||||||||||||    
T  13472585 tcattaat-gaaaggtcgtcttgatcccgaccttg-tttta-ttttgtgctttttctggaaaaatggtaatacaaaaaac 13472661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 35286119 - 35286055
Alignment:
Q  4 taagggtccctcaaatattaacagaaaatgaaggaccccccaggggagggtagcagaggcaacag 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35286119 taagggtccctcaaatattaacagaaaatgaaggaccccccaggggagggtagcagaggcaacag 35286055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 208 - 386
Target Start/End: Original strand, 31555836 - 31556009
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||| ||| ||  |||||||||||| ||||||  || |||||| | || ||||| ||||||||||| | | || |||    
T  31555836 atgtttgtttgttgctttatgtttttccaaaaaa--tcctttcgtcccacccgaggcgagagtgaatttgtttagggatttttgctttatgtattt-tca 31555932  T
Q  308 tcattaataaaaaggtcgt-ttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    |||||| | ||| |||||| ||||||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||    
T  31555933 tcattagtgaaa-ggtcgtcttgatcccgactttg-ttttatttt-gtgctttttctggaaaaatggtaatacaaaaaac 31556009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 140 - 290
Target Start/End: Complemental strand, 1065335 - 1065182
Alignment:
Q  140 gacacatggggtggtcagccgtaattggaccgttgttgacgttccttccgctactt-tttgttcaaataatgt--ttgtttgttgctttgcgtttttcaa 236  Q
    ||||||||| |||||  |||  ||||||  || |||||| ||||||||| |||||  ||||||||||||||||  |||||||||| |||  |||||||      
T  1065335 gacacatggagtggtttgccacaattgggtcgctgttgatgttccttccactactcatttgttcaaataatgtgtttgtttgttgttttatgtttttctt 1065236  T
Q  237 aagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggcttttt 290  Q
    || || ||||||||||||||||||||| |||||| |||| ||||| || |||||    
T  1065235 aaaaatatcctttcgtcccgcccgagacgaaagtaaacttgtgtatggtttttt 1065182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 384
Target Start/End: Original strand, 31543769 - 31543908
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    |||||| |||||| ||||||   |||||||| | || ||||||||||||||||| |  ||| |||||||||||  ||||||||| ||||||||||| |||    
T  31543769 atccttccgtcccacccgaggcaaaagtgaatttgtttagggctttttgctttatg-tattttcatcattaat-gaaaggtcgtcttgatcccgaccttg 31543866  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaa 384  Q
     |||||||||| ||||||||||   ||||||||||||||||||    
T  31543867 tttttattttt-tgctttttctgaaaaaatggtaatacaaaaa 31543908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 243 - 386
Target Start/End: Original strand, 2388421 - 2388561
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgtttga-tcccgactttg 341  Q
    ||||||||||||| ||||||  || |||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||| | | ||||||| |||    
T  2388421 atcctttcgtcccacccgaggcgagagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtctcaatcccgaccttg 2388518  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
     ||||||||| ||||||||||| | ||||||||||||||||||||    
T  2388519 -ttttatttt-gtgctttttctggaaaaatggtaatacaaaaaac 2388561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 31543977 - 31544006
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  31543977 aaatcatgcattaataaacccgttgaacac 31544006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 31556077 - 31556106
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  31556077 aaatcatgcattaataaacccgttgaacac 31556106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 495
Target Start/End: Original strand, 1958898 - 1958926
Alignment:
Q  467 atcatgcattaataaacccgttgaacaca 495  Q
    |||||||||||||||||||||||||||||    
T  1958898 atcatgcattaataaacccgttgaacaca 1958926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 74 - 495
Target Start/End: Original strand, 32002855 - 32003284
Alignment:
Q  74 gcttttcgaaggttgaattcagacacgcaagataatccactaacgggttatattccttggtattgcgacacatggggtggtcagccgtaattggaccgtt 173  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||| |||||    
T  32002855 gcttttcgaaagttgaattcaaacacgcaagataatccactaacgggttatattccctggtattgcgacacatggagtggttagccgtaattgggccgtt 32002954  T
Q  174 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaa 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32002955 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgcttttcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaa 32003054  T
Q  274 ctggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttggaaaatg 372  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||| ||||   ||||||||| |||||||||||||    
T  32003055 ctggtgtagggctttttgctttaag-aattgtcatcattaataaaaaggtcgttttgatctcgactttg-ttttcactttgtgcttcttcttggaaaatg 32003152  T
Q  373 gtaatacaaaaaa--cagaagnnnnnnnntaataa-------aatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataa 463  Q
    |||||||||||||  || ||         ||| ||       |||||||||||||| ||||||||||||||||||  | ||||||||| |||||| ||||    
T  32003153 gtaatacaaaaaaaccaaaaaaattcttctaaaaaaatctttaatcattctcaaatatctgcataatcataacttgtacttacttgtc-aaaatcaataa 32003251  T
Q  464 -taaatcatgcattaataaacccgttgaacaca 495  Q
      |||||||||||| ||||||||||||||||||    
T  32003252 ccaaatcatgcattgataaacccgttgaacaca 32003284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 230 - 495
Target Start/End: Complemental strand, 21479450 - 21479189
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg--tt 327  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||    
T  21479450 ttttcaaaa-aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttactttaagaaattgtcatcattaataaaaaggtcgtttt 21479352  T
Q  328 tgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcat 427  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||         |  |  |||||||||||||| |||||||    
T  21479351 tgatcccgactttgctttta-ttttgtgctttttcttggaaaatggtaatacaaaaaaccaaa---aaatctttctttaatcattctcaaatatctgcat 21479256  T
Q  428 aatcataactttcatttacttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacaca 495  Q
    |||||||||||  ||||||||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  21479255 aatcataacttatatttacttgtc-aaaatcaacaataaatcatgcattaataaacccgttgaacaca 21479189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 192 - 495
Target Start/End: Complemental strand, 25856612 - 25856317
Alignment:
Q  192 actttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttg 291  Q
    |||||||||||||||||||||||||||||||||| |  |||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  25856612 actttttgttcaaataatgtttgtttgttgcttttctcttttcaaa-gaacatcctttcgttccgcccgaggtgaaagtgaactggtgtagggctttttg 25856514  T
Q  292 ctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttt-tcttggaaaatggtaatacaaaaaacaga 389  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||  ||||||| |||| ||| | ||||||||||||||||||||  |    
T  25856513 ctttaag-aattgtcatcattaataaaaaggtcgttttgatcccgactttg-ttttcattttgtgtttttctctggaaaaatggtaatacaaaaaaccca 25856416  T
Q  390 agnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgat-aataaatcatgcattaataaacccgtt 488  Q
    |         ||||  ||||||| |||||| ||||||||| ||||||||    ||||||| | |||||| || |||||||||||||||||||||||||||    
T  25856415 a-----aaagtaat--aatcattttcaaatatctgcataaccataacttgttcttacttg-ccaaaatcaataaataaatcatgcattaataaacccgtt 25856324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 156 - 495
Target Start/End: Original strand, 20741735 - 20742076
Alignment:
Q  156 agccgtaattggaccgttgttgacgttccttccgctactttt-tgttcaaataatgt--ttgtttgttgctttgcgt-ttttcaaaagaaca--tccttt 249  Q
    ||||||||||||  |  ||||||||||||||||||||||  | ||||| ||||||||  ||||||||||||| || | ||||||||| || |  ||||||    
T  20741735 agccgtaattgggtcactgttgacgttccttccgctactcatatgttcgaataatgtgtttgtttgttgctt-gcttcttttcaaaataataaatccttt 20741833  T
Q  250 cgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttat 348  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||| |||| |||||  ||| |||||||||||||||| ||||      
T  20741834 cgtcccgcccgagatgaaagtgaacttgtgtagggcttttcgctttaag-aattgtcatcgttaacaaaaaattcgttttgatcccgactttg-ttttca 20741931  T
Q  349 ttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttactt 448  Q
    |||||||||| |||||| |||||||||| |||||||||  ||         |  |  |||||||||||||| ||||||||||||||||||  | ||||||    
T  20741932 ttttgtgcttcttcttgaaaaatggtaaaacaaaaaaccaaa--aaaatctttctttaatcattctcaaatatctgcataatcataacttatacttactt 20742029  T
Q  449 gtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacaca 495  Q
    ||| |||||| ||||| |||||||||||||||||||||||||||||||    
T  20742030 gtc-aaaatcaataatcaaatcatgcattaataaacccgttgaacaca 20742076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 156 - 495
Target Start/End: Original strand, 20736866 - 20737207
Alignment:
Q  156 agccgtaattggaccgttgttgacgttccttccgctactttt-tgttcaaataatgt--ttgtttgttgctttgcgt-ttttcaaaagaaca--tccttt 249  Q
    ||||||||||||  |  ||||||||||||||||||||||  | ||||| ||||||||  ||||||||||||| || | ||||||||| || |  ||||||    
T  20736866 agccgtaattgggtcactgttgacgttccttccgctactcatatgttcgaataatgtgtttgtttgttgctt-gcttcttttcaaaataataaatccttt 20736964  T
Q  250 cgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttat 348  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||| |||| |||||  ||| |||||||||||||||| ||||      
T  20736965 cgtcccgcccgagatgaaagtgaacttgtgtagggcttttcgctttaag-aattgtcatcgttaacaaaaaattcgttttgatcccgactttg-ttttca 20737062  T
Q  349 ttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttactt 448  Q
    |||||||||| |||||| |||||||||| |||||||||  ||         |  |  |||||||||||||| ||||||||||||||||||  | ||||||    
T  20737063 ttttgtgcttcttcttgaaaaatggtaaaacaaaaaaccaaa--aaaatctttctttaatcattctcaaatatctgcataatcataacttatacttactt 20737160  T
Q  449 gtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacaca 495  Q
    ||| |||||| ||||| ||||||| ||||||||||||| |||||||||    
T  20737161 gtc-aaaatcaataatcaaatcatccattaataaaccccttgaacaca 20737207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 156 - 495
Target Start/End: Original strand, 20745424 - 20745765
Alignment:
Q  156 agccgtaattggaccgttgttgacgttccttccgctactttt-tgttcaaataatgt--ttgtttgttgctttgcgt-ttttcaaaagaaca--tccttt 249  Q
    ||||||||||||  |  ||||||||||||||||||||||  | ||||| ||||||||  ||||||||||||| || | ||||||||| || |  ||||||    
T  20745424 agccgtaattgggtcactgttgacgttccttccgctactcatatgttcgaataatgtgtttgtttgttgctt-gcttcttttcaaaataataaatccttt 20745522  T
Q  250 cgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttat 348  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||| |||| |||||  ||| |||||||||||||||| ||||      
T  20745523 cgtcccgcccgagatgaaagtgaacttgtgtagggcttttcgctttaag-aattgtcatcgttaacaaaaaattcgttttgatcccgactttg-ttttca 20745620  T
Q  349 ttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttactt 448  Q
    |||||||||| |||||| |||||||||| |||||||||  ||         |  |  |||||||||||||| ||||||||||||||||||  | ||||||    
T  20745621 ttttgtgcttcttcttgaaaaatggtaaaacaaaaaaccaaa--aaaatctttctttaatcattctcaaatatctgcataatcataacttatacttactt 20745718  T
Q  449 gtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacaca 495  Q
    ||| |||||| ||||| ||||||| ||||||||||||| |||||||||    
T  20745719 gtc-aaaatcaataatcaaatcatccattaataaaccccttgaacaca 20745765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 175 - 493
Target Start/End: Complemental strand, 22160448 - 22160132
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa----------catcctttcgtcccgcccgagat 264  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||| || ||||||||| ||          |||||||| ||||||||||||||    
T  22160448 ttgacgttccttccgctactttttgttcaattaatgtttgtttgatgcttttcgcttttcaaaaaaaaaaaaaaaaacatccttttgtcccgcccgagat 22160349  T
Q  265 gaaagtgaactggtgtagggct-ttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttc 362  Q
    |||||||||||||||||||||| |||||||||||| |||||||       | |||||||||| |||||||||||| || |||||| |||| |||| |||     
T  22160348 gaaagtgaactggtgtagggcttttttgctttaag-aattgtc-------aaaaaaaggtcgttttgatcccgacctttctttta-ttttatgctctttt 22160258  T
Q  363 ttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgata 462  Q
     || ||||||||||||||||||||   |         ||||  ||||||||||| || |||||||||||||| |||  | ||||||||| |||||  |||    
T  22160257 ctgaaaaatggtaatacaaaaaacccca---aaaaaataat--aatcattctcatatttctgcataatcatagcttgtacttacttgtc-aaaatgaata 22160164  T
Q  463 at-aaatcatgcattaataaacccgttgaaca 493  Q
    || |||||||||||||||||||||||||||||    
T  22160163 atcaaatcatgcattaataaacccgttgaaca 22160132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 306 - 497
Target Start/End: Complemental strand, 22092646 - 22092458
Alignment:
Q  306 catcattaataaaaaggtcgttt-gatcccgactttgcttttatttttgtgctttttcttggaaaatggtaa-tacaaaaaacagaagnnnnnnnntaat 403  Q
    |||||||||||||||| ||| || ||||||||||||||||||  ||||||||| ||||| | |||||||||| ||||||||||  ||         ||||    
T  22092646 catcattaataaaaag-tcgcttcgatcccgactttgctttttattttgtgctctttctagaaaaatggtaaatacaaaaaaccaaa-----aaaataat 22092553  T
Q  404 aa-aatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataa-taaatcatgcattaataaacccgttgaacacaat 497  Q
    || ||||||| |||||| | ||||||||| ||||||||||||||| ||| |||||| ||||  |||||||||| ||||||||||||||||||||||    
T  22092552 aataatcattttcaaatatgtgcataatcttaactttcatttactcgtc-aaaatcaataaccaaatcatgcaataataaacccgttgaacacaat 22092458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 384
Target Start/End: Complemental strand, 17679302 - 17679163
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    ||||||||||||| ||||||  || |||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||  ||||||||||| |||    
T  17679302 atcctttcgtcccacccgaggcgagagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgccttgatcccgaccttg 17679205  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaa 384  Q
     ||||||||| ||||||||||| | ||||||||||||||||||    
T  17679204 tttttatttt-gtgctttttctggaaaaatggtaatacaaaaa 17679163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 245 - 385
Target Start/End: Original strand, 6666793 - 6666935
Alignment:
Q  245 cctttcgtcccgcccgagatgaaagtgaactggtgtagggcttttt----gctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactt 339  Q
    ||||||||||| |||||| |||||||||| | || |||||||||||    |||||| | | || ||||||||||| ||| |||||| | |||||||||||    
T  6666793 cctttcgtcccacccgaggtgaaagtgaatttgtttagggctttttttttgctttatgtattt-tcatcattaatgaaa-ggtcgtctcgatcccgactt 6666890  T
Q  340 tgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaa 385  Q
    || ||||||||| ||||||||||| | |||||||||||||||||||    
T  6666891 tgtttttatttt-gtgctttttctggaaaaatggtaatacaaaaaa 6666935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 384
Target Start/End: Complemental strand, 39841953 - 39841814
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    ||||||||||||| ||||||  || |||||| | || ||||||||||||||||| | | || |||||||||||  || |||||  ||||||||||| |||    
T  39841953 atcctttcgtcccacccgaggcgagagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatggaa-ggtcgccttgatcccgaccttg 39841856  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaa 384  Q
     ||||||||| ||||||||||| | ||||||||||||||||||    
T  39841855 tttttatttt-gtgctttttctggaaaaatggtaatacaaaaa 39841814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 243 - 377
Target Start/End: Complemental strand, 24703137 - 24703006
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttg 341  Q
    |||||||||| || ||||||||||||||||||| || |||| |||||||||| | | | ||  |||||||||||||||  ||| ||||||| ||||||||    
T  24703137 atcctttcgttccacccgagatgaaagtgaacttgtttaggtctttttgcttcatgtattttccatcattaataaaaa-ttcgttttgatctcgactttg 24703039  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaat 377  Q
     |||||   ||||| ||||||| | |||||||||||    
T  24703038 ttttta---ttgtgttttttctagaaaaatggtaat 24703006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 386
Target Start/End: Original strand, 16767372 - 16767415
Alignment:
Q  343 ttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    ||||||||| ||||||||||| | ||||||||||||||||||||    
T  16767372 ttttattttagtgctttttctggaaaaatggtaatacaaaaaac 16767415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 17679096 - 17679067
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  17679096 aaatcatgcattaataaacccgttgaacac 17679067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 74 - 495
Target Start/End: Original strand, 9082 - 9491
Alignment:
Q  74 gcttttcgaaggttgaattcagacacgcaagataatccactaacgggttatattccttggtattgcgacacatggggtggtcagccgtaattggaccgtt 173  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||| |||||||  ||||    
T  9082 gcttttcgaagattgaattcagacacgcaagataatccactaacgggttatattccctggtattgcgacacatggagtggttagccataattgggacgtt 9181  T
Q  174 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaa 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||    
T  9182 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgcttttagcttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaa 9281  T
Q  274 ctggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttgcttttatttttgtgctttttcttggaaaa-t 371  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||| ||| | ||| |||||| ||||||||||| |    
T  9282 ctggtgtagggctttttgctttatgaa-ttgtcatcattaataaaaaggtcgttttgatcccgactttgttttcacttt-gtgcttcttcttggaaaaat 9379  T
Q  372 ggtaatacaaaaaacagaagnnnnnnnntaataa-aatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataa-taaatc 469  Q
    ||||||| ||||| |  ||          ||||| ||||||| |||||| ||||||||||||||| ||     |||||||||||| || |||| ||||||    
T  9380 ggtaataaaaaaacccaaaa---------aataataatcattttcaaatatctgcataatcataaattg----tacttgtcaaaa-tcaataaataaatc 9465  T
Q  470 atgcattaataaacccgttgaacaca 495  Q
    |||||||||||||| |||||||||||    
T  9466 atgcattaataaacacgttgaacaca 9491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 213; Significance: 1e-116; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 74 - 493
Target Start/End: Original strand, 99551 - 99968
Alignment:
Q  74 gcttttcgaaggttgaattcagacacgcaagataatccactaacgggttatattccttggtattgcgacacatggggtggtcagccgtaattggaccgtt 173  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||| ||||| ||||||||||||  ||||    
T  99551 gcttttcgaaggttgaattcagacaggcaagataatccactaacgggttatattccctggtattgcgacgcatggagtggttagccgtaattgggtcgtt 99650  T
Q  174 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaa 273  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |  ||||||||| ||||||||||||||||||||||| ||||||||||    
T  99651 gttgacgttccttccgctactttttgttcaaataatgtttgtctgttgctttacacttttcaaaaaaacatcctttcgtcccgcccgaggtgaaagtgaa 99750  T
Q  274 ctggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttgg--aaaa 370  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||| |||||||||| ||||  ||||||||||||   |||  ||||    
T  99751 ctggtgtagggctttttgctttaag-aattgtcatcactaataaaaaggtcgttttgaacccgactttg-ttttcattttgtgcttttctctggaaaaaa 99848  T
Q  371 tggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaatc 469  Q
    ||||| ||||||||||  ||         |  | ||||||||||||||| ||||||||||||||||||  | ||||||||| |||||| ||||| |||||    
T  99849 tggtagtacaaaaaaccaaa---aaaaattctttaaatcattctcaaatatctgcataatcataacttgtacttacttgtc-aaaatcaataatcaaatc 99944  T
Q  470 atgcattaataaacccgttgaaca 493  Q
    ||||||| ||||||||||||||||    
T  99945 atgcattgataaacccgttgaaca 99968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 74 - 495
Target Start/End: Complemental strand, 24748 - 24330
Alignment:
Q  74 gcttttcgaaggttgaattcagacacgcaagataatccactaacgggttatattccttggtattgcgacacatggggtggtcagccgtaattggaccgtt 173  Q
    |||||||||||||| | ||||||| ||||||||||||||||   |||||||||||  | |||||||||||||||  ||||| ||||||||||||  ||||    
T  24748 gcttttcgaaggttaagttcagacgcgcaagataatccactgctgggttatattcgctagtattgcgacacatgaagtggttagccgtaattgggtcgtt 24649  T
Q  174 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaa 273  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||    
T  24648 gttgacgttcctcccgctactttttgttcaaaaaatgtttgtttgttgcttttcgcttttcaaaagaacattctttcgtcccgcccgagatgaaagtgaa 24549  T
Q  274 ctggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttggaaaatg 372  Q
    ||  ||||| ||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||  ||||||||||||||| | ||||||    
T  24548 cttttgtagagcttttttctttaag-aattgtcatcattaataaaaaggtcgttttgatcccgactttg-ttttcattttgtgctttttctggaaaaatg 24451  T
Q  373 gtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaatcat 471  Q
    ||||||||||||||  ||         |  |  |||| ||||||||| ||||||||||||||||||  | |||| |||| |||||| ||||| |||||||    
T  24450 gtaatacaaaaaaccaaa--aaaattcttctttaatcgttctcaaatatctgcataatcataacttgtacttacatgtc-aaaatcaataatcaaatcat 24354  T
Q  472 gcattaataaacccgttgaacaca 495  Q
    ||||||||||||||||||||||||    
T  24353 gcattaataaacccgttgaacaca 24330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 184; Significance: 2e-99; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 74 - 497
Target Start/End: Original strand, 20557025 - 20557457
Alignment:
Q  74 gcttttcgaaggttgaattcagacacgcaagataatccactaacgggttatattccttggtattgcgacacatggggtggtcagccgtaattggaccgtt 173  Q
    |||||||||||||||||||||||| | |||||||||||| |  ||||||||||||| |||||||||||||||||| ||||| |||| || ||||  ||||    
T  20557025 gcttttcgaaggttgaattcagacgcacaagataatccattgccgggttatattccctggtattgcgacacatggagtggttagccatatttgggtcgtt 20557124  T
Q  174 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgttttt----caaaagaacatcctttcgtcccgcccgagatgaaag 269  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||| || ||||     |||| |||||| |||||||||||||||||||||||    
T  20557125 gttgacgtacattccgctactttttgttcaaataatgtttgtttgttgcttttcgcttttaaaaaaaaaaaacatcatttcgtcccgcccgagatgaaag 20557224  T
Q  270 tgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg--cttttatttttgtgctttttcttgg 366  Q
    ||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||| |||||| ||||||||   |||||  |||||||||||||||||    
T  20557225 tgaactgatgtagggctttttgctttaag-atttgtcatcattaataaaaaggtcgtcttgatctcgactttgtttttttaaatttgtgctttttcttgg 20557323  T
Q  367 --aaaatggtaatacaaaaaa-cagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataa 463  Q
      ||||||||||||||||||| || ||         |  |  |||||||||||||| |||||||||||||||| |  | ||||||||| |||||| ||||    
T  20557324 aaaaaatggtaatacaaaaaaccaaaaaaaaattctttctttaatcattctcaaatatctgcataatcataacctatacttacttgtc-aaaatcaataa 20557422  T
Q  464 t-aaatcatgcattaataaacccgttgaacacaat 497  Q
    | |||||||||||||||||||||||||||||||||    
T  20557423 tcaaatcatgcattaataaacccgttgaacacaat 20557457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 175 - 495
Target Start/End: Complemental strand, 3385856 - 3385538
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaaca-----tcctttcgtcccgcccgagatgaaag 269  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||| || |||| |||| || |     ||||||||||||||||||||||||||    
T  3385856 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgattttcgcttttaaaaaaaaaaaaaaatcctttcgtcccgcccgagatgaaag 3385757  T
Q  270 tgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttt-tcttgga 367  Q
    ||| || |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||  |||||||||||| ||| | |    
T  3385756 tgatcttgtgtagggctttttgctttaag-aattgtcatcattaataaaaaggtcgttttgatcccgactttg-ttttcattttgtgcttttctctggaa 3385659  T
Q  368 aaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataataaa 467  Q
    |||||||||||||||||||  ||         ||||  ||||||| |||||| ||||||||| ||||||||  | |||||||||||||||| | ||||||    
T  3385658 aaatggtaatacaaaaaacccaa-----aaagtaat--aatcattttcaaatatctgcataaccataacttgaacttacttgtcaaaaatcaacaataaa 3385566  T
Q  468 tcatgcattaataaacccgttgaacaca 495  Q
    ||||||||||||||||||||||||||||    
T  3385565 tcatgcattaataaacccgttgaacaca 3385538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 230 - 498
Target Start/End: Original strand, 22708162 - 22708427
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaat-aaaaaggtcg-tt 327  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| ||    
T  22708162 ttttcaaaa-aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag-aattgtcatcatttataaaaaaggtcgttt 22708259  T
Q  328 tgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcat 427  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||         |  |  |||||||||||||| |||||||    
T  22708260 tgatcccgactttgctttta-ttttgtgctttttcttggaaaatggtaatacaaaaaaccaaa--aaaatctttctttaatcattctcaaatatctgcat 22708356  T
Q  428 aatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacacaatg 498  Q
    |||||||||||  | ||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||    
T  22708357 aatcataacttatacttacttgtc-aaaatcaataatcaaatcatgcattaataaacccgttgaacacaatg 22708427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 240 - 386
Target Start/End: Original strand, 16364999 - 16365145
Alignment:
Q  240 aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaat-aaaaaggtcg-tttgatcccgac 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| ||||||||||||    
T  16364999 aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag-aattgtcatcatttataaaaaaggtcgttttgatcccgac 16365097  T
Q  338 tttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16365098 tttgctttta-ttttgtgctttttcttggaaaatggtaatacaaaaaac 16365145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 175 - 385
Target Start/End: Original strand, 9187604 - 9187821
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaac---------atcctttcgtcccgcccgagatg 265  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||| ||          |||||||||||||||||||||||    
T  9187604 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgcttttcgcttttcaaaaaaaataaaaataaatcctttcgtcccgcccgagatg 9187703  T
Q  266 aaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttctt 364  Q
    ||||| | || |||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||      
T  9187704 aaagttatcttgtgtagggttttttgctttaag-aattgtcatcattaataaaaaggtcgttttgatcccgactttg-tttta-ttttgtgctttttccg 9187800  T
Q  365 ggaaaatggtaatacaaaaaa 385  Q
    | |||||||||||||||||||    
T  9187801 gaaaaatggtaatacaaaaaa 9187821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 243 - 497
Target Start/End: Complemental strand, 16724094 - 16723844
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttg 341  Q
    ||||||||||||||||  |||||||||||||||  |||||||||||||||||| || | |||||||| |||||||||||||||||| |||||||||||||    
T  16724094 atcctttcgtcccgcca-agatgaaagtgaacttatgtagggctttttgctttgagca-ttgtcatctttaataaaaaggtcgttttgatcccgactttg 16723997  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttca 441  Q
     ||| ||||| ||||||||||||||||||||||||||||||||||  ||          || |||||||||||||||||||||||||||||||||||  |    
T  16723996 ttttcatttt-gtgctttttcttggaaaatggtaatacaaaaaaccaaa--aaaaaaagaaaaaaatcattctcaaatgtctgcataatcataacttgta 16723900  T
Q  442 tttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacacaat 497  Q
     ||||||||| |||||| |||||  ||||||||||||||||||||||||||||||||    
T  16723899 cttacttgtc-aaaatcaataatcgaatcatgcattaataaacccgttgaacacaat 16723844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 243 - 495
Target Start/End: Original strand, 14874148 - 14874395
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttg 341  Q
    ||||||||||||||||||||| |||||||||||  ||||||| |||||||||||||  || |||||||||||||||||||||| |||||||||||||||     
T  14874148 atcctttcgtcccgcccgagacgaaagtgaacttatgtagggatttttgctttaag-tatagtcatcattaataaaaaggtcgttttgatcccgacttt- 14874245  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttca 441  Q
     ||||| ||||||||||||||| | ||||||||||||||||||||  ||         |  |  |||| ||||||||| ||||||||||||||||||  |    
T  14874246 atttta-ttttgtgctttttctggaaaaatggtaatacaaaaaaccaaa--aaaaatcttcttcaatccttctcaaatatctgcataatcataacttgta 14874342  T
Q  442 tttacttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacaca 495  Q
     |||||  || |||||| | ||||||||||||||||||||||||||||||||||    
T  14874343 cttactcttc-aaaatcaacaataaatcatgcattaataaacccgttgaacaca 14874395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 326 - 497
Target Start/End: Complemental strand, 3832042 - 3831874
Alignment:
Q  326 tttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgc 425  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||         |  || |||||||||||||| |||||    
T  3832042 tttgatcccgactttgcttttatttt-gtgctttttcttggaaaatggtaatacaaaaaaccaaa--aaaatctttctataatcattctcaaatatctgc 3831946  T
Q  426 ataatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacacaat 497  Q
    |||||||||||||  | ||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||    
T  3831945 ataatcataacttatacttacttgtc-aaaatcaataatcaaatcatgcattaataaacccgttgaacacaat 3831874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 243 - 495
Target Start/End: Complemental strand, 15571023 - 15570777
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttg 341  Q
    ||||||| ||||||||| |||  ||||||||||  |||||||||||||||||||||  ||||||||| |||||||| |||||| ||||||||||||||||    
T  15571023 atccttttgtcccgcccaagacaaaagtgaacttatgtagggctttttgctttaag-cattgtcatcgttaataaagaggtcgttttgatcccgactttg 15570925  T
Q  342 cttttatttttgtgc-tttttcttgg-aaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataacttt 439  Q
     ||||  |||||||| |||||||||| ||||||||||||||||||||  ||         ||||  ||||||| |||||| ||||||||||||||| ||     
T  15570924 -ttttcattttgtgcttttttcttggaaaaatggtaatacaaaaaaccaaa-----aaaataat--aatcattttcaaatatctgcataatcataatttg 15570833  T
Q  440 catttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacaca 495  Q
     | ||||||||| |||||| ||||| |||||||| |||||||||| |||||||||||    
T  15570832 tacttacttgtc-aaaatcaataatcaaatcatgaattaataaacacgttgaacaca 15570777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 243 - 495
Target Start/End: Complemental strand, 15575151 - 15574905
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttg 341  Q
    ||||||| ||||||||| |||  ||||||||||  |||||||||||||||||||||  ||||||||| |||||||| |||||| ||||||||||||||||    
T  15575151 atccttttgtcccgcccaagacaaaagtgaacttatgtagggctttttgctttaag-cattgtcatcgttaataaagaggtcgttttgatcccgactttg 15575053  T
Q  342 cttttatttttgtgc-tttttcttgg-aaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataacttt 439  Q
     ||||  |||||||| |||||||||| ||||||||||||||||||||  ||         ||||  ||||||| |||||| ||||||||||||||| ||     
T  15575052 -ttttcattttgtgcttttttcttggaaaaatggtaatacaaaaaaccaaa-----aaaataat--aatcattttcaaatatctgcataatcataatttg 15574961  T
Q  440 catttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacaca 495  Q
     | ||||||||| |||||| ||||| |||||||| |||||||||| |||||||||||    
T  15574960 tacttacttgtc-aaaatcaataatcaaatcatgaattaataaacacgttgaacaca 15574905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 196 - 386
Target Start/End: Original strand, 12512228 - 12512418
Alignment:
Q  196 tttgttcaaataatgt-ttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctt 294  Q
    ||||||||| |||| | ||||||||||||||  ||||| ||||| || ||||||||||||| ||||||| ||||||||||| || ||||||||||| |||    
T  12512228 tttgttcaattaatatgttgtttgttgctttatgttttacaaaaaaaaatcctttcgtcccacccgagacgaaagtgaacttgtttagggctttttcctt 12512327  T
Q  295 taagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    || |  ||| |||||||||||||||   ||| |||||||||||||||| |||||   |||||||| ||||||||||||||||||||| |||||    
T  12512328 tacg-tattttcatcattaataaaataatcgctttgatcccgactttgttttta-ccttgtgcttgttcttggaaaatggtaatacataaaac 12512418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 243 - 386
Target Start/End: Original strand, 14921598 - 14921742
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttg 341  Q
    ||||||||||||||||| ||| |||||||||||  |||||||||||||||||||||  ||||||||| |||||||| |||||| ||||||||||||||||    
T  14921598 atcctttcgtcccgcccaagacgaaagtgaacttatgtagggctttttgctttaag-cattgtcatcgttaataaagaggtcgctttgatcccgactttg 14921696  T
Q  342 cttttatttttgtgc-tttttcttgg-aaaatggtaatacaaaaaac 386  Q
     ||||  |||||||| |||||||||| |||||||||| |||||||||    
T  14921697 -ttttcattttgtgcttttttcttggaaaaatggtaacacaaaaaac 14921742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 74 - 213
Target Start/End: Original strand, 8660590 - 8660717
Alignment:
Q  74 gcttttcgaaggttgaattcagacacgcaagataatccactaacgggttatattccttggtattgcgacacatggggtggtcagccgtaattggaccgtt 173  Q
    |||||||||||||||||||||||| ||||||||||||||||            ||| |||||||||||||||||| ||||| | ||||||||||  ||||    
T  8660590 gcttttcgaaggttgaattcagacgcgcaagataatccact------------tccctggtattgcgacacatggagtggttaaccgtaattgggtcgtt 8660677  T
Q  174 gttgacgttccttccgctactttttgttcaaataatgttt 213  Q
    ||| | || |||||||||||||||||||||||||||||||    
T  8660678 gtttatgtcccttccgctactttttgttcaaataatgttt 8660717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 406 - 497
Target Start/End: Original strand, 3360691 - 3360783
Alignment:
Q  406 aatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat--aaatcatgcattaataaacccgttgaacacaat 497  Q
    ||||||| |||||| ||||||||||||||| ||||||||||||||||||| || | |||  |||||||||||||||||||||||||||||||||    
T  3360691 aatcattttcaaatatctgcataatcataattttcatttacttgtcaaaa-tcaaaaatcaaaatcatgcattaataaacccgttgaacacaat 3360783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 243 - 328
Target Start/End: Complemental strand, 15898801 - 15898717
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt 328  Q
    ||||||||||||||||| ||| |||||||||||  |||||||||||||||||||||  ||||||||| ||||||||||||||||||    
T  15898801 atcctttcgtcccgcccaagacgaaagtgaacttatgtagggctttttgctttaag-cattgtcatcgttaataaaaaggtcgttt 15898717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 243 - 387
Target Start/End: Complemental strand, 26216963 - 26216823
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgtttgatcccgactttgc 342  Q
    ||||||||||||| ||||||| | ||||||||| || ||||||| ||||||||  |  ||| ||||||||||   |||||||| |||||||||||||||     
T  26216963 atcctttcgtcccacccgagacggaagtgaacttgtttagggctctttgcttttcg-tattttcatcattaa-ggaaaggtcgcttgatcccgactttg- 26216867  T
Q  343 ttttatttttgtgctttttcttggaaaatggtaatacaaaaaaca 387  Q
    ||||| ||||||||||||||| | |||||||||||||||||||||    
T  26216866 tttta-ttttgtgctttttctggaaaaatggtaatacaaaaaaca 26216823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 3360520 - 3360662
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttg 341  Q
    ||||||| ||||||||||||| |||||||||||  | ||||| | ||||||| | | | ||  ||||||||||||||| |||| || |||||||||||||    
T  3360520 atccttttgtcccgcccgagacgaaagtgaactaatttagggttgtttgcttcaggcatttcccatcattaataaaaaagtcgcttcgatcccgactttg 3360619  T
Q  342 cttttatttttgtgctttttcttgg-aaaatggtaatacaaaaaa 385  Q
      |||  ||| |||||||||||||| |||||||||||||||||||    
T  3360620 --tttcatttcgtgctttttcttggaaaaatggtaatacaaaaaa 3360662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 386
Target Start/End: Complemental strand, 8099468 - 8099327
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    |||||| |||||| ||||||  || |||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||| ||||||||||| | |    
T  8099468 atccttccgtcccacccgaggcgagagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtcttgatcccgacctcg 8099371  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
     ||||||||| ||||||||||| | ||||||||||||||||||||    
T  8099370 tttttatttt-gtgctttttctggaaaaatggtaatacaaaaaac 8099327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 212 - 320
Target Start/End: Complemental strand, 12509415 - 12509308
Alignment:
Q  212 ttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcat 311  Q
    ||||||||||||||  ||||||||||| || || |||||||||| |||| || |||||||||||  | ||||| ||||||||||| |  ||| |||||||    
T  12509415 ttgtttgttgctttatgtttttcaaaaaaaaattctttcgtcccacccgtgacgaaagtgaacttatttaggggtttttgctttacg-tattttcatcat 12509317  T
Q  312 taataaaaa 320  Q
    |||||||||    
T  12509316 taataaaaa 12509308  T

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Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 485
Target Start/End: Complemental strand, 12509255 - 12509176
Alignment:
Q  406 aatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaaccc 485  Q
    |||||||  ||||||| ||||| ||||||||||| ||||||||||| | |||| ||||| |||||||||||||||||||||    
T  12509255 aatcatttccaaatgtttgcatgatcataacttttatttacttgtc-agaatcaataatcaaatcatgcattaataaaccc 12509176  T

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Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 406 - 497
Target Start/End: Original strand, 16365163 - 16365244
Alignment:
Q  406 aatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacacaat 497  Q
    |||||||||||||| ||||||||||||||||||  | ||||||||    ||||      |||||||||||||||||||||||||||||||||    
T  16365163 aatcattctcaaatatctgcataatcataacttgtacttacttgt----aatc------aaatcatgcattaataaacccgttgaacacaat 16365244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 465 - 497
Target Start/End: Original strand, 14921798 - 14921830
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacacaat 497  Q
    |||||||||||||||||||||||||||||||||    
T  14921798 aaatcatgcattaataaacccgttgaacacaat 14921830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 493
Target Start/End: Original strand, 9187845 - 9187934
Alignment:
Q  406 aatcattctcaaatgtct--gcataatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaaca 493  Q
    |||||||||||||| | |  |||||||||||||||    ||||||||||||| || ||||| ||| |||||||||||||||||||||||||    
T  9187845 aatcattctcaaatatatttgcataatcataacttgtccttacttgtcaaaa-tcaataatcaaagcatgcattaataaacccgttgaaca 9187934  T

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Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 385
Target Start/End: Complemental strand, 1883303 - 1883261
Alignment:
Q  343 ttttatttttgtgctttttcttggaaaatggtaatacaaaaaa 385  Q
    ||||||||| ||||||||||| | |||||||||||||||||||    
T  1883303 ttttattttagtgctttttctggaaaaatggtaatacaaaaaa 1883261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 26216747 - 26216718
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  26216747 aaatcatgcattaataaacccgttgaacac 26216718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 183; Significance: 9e-99; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 75 - 497
Target Start/End: Original strand, 9435 - 9864
Alignment:
Q  75 cttttcgaaggttgaattcagacacgcaagataatccactaacgggttatattccttggtatt-gcgacacatggggtggtcagccgtaattggaccgtt 173  Q
    ||||||||||||||||||||||||||||||||||||||||  || |||||||| | | || || | ||||||||| ||||| ||||||||||||  |  |    
T  9435 cttttcgaaggttgaattcagacacgcaagataatccactgccgagttatattacctagtgtttgtgacacatggagtggttagccgtaattgggtcact 9534  T
Q  174 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa--catcctttcgtcccgcccgagatgaaagtg 271  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||||||||| || |||| |||| ||  ||||||||||||||||||||||||||||||    
T  9535 gttgatgttcattccgctaccttttgttcaaataatgtttgtttgttgcttttcgcttttaaaaaaaaaacatcctttcgtcccgcccgagatgaaagtg 9634  T
Q  272 aactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttgcttttatttttgtgctttttcttgg-aaa 369  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||  |||||||||||||||||| |||    
T  9635 aacttgtgtagggctttttgctttaag-aattgtcatcattaataaaaaggtcgtcttgatcccgactttgttttttattttgtgctttttcttggaaaa 9733  T
Q  370 atggtaatacaaaaaac---agaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-a 465  Q
    |||||||||||||||||   | ||         |  |  ||||||||| |||| |||||||||||||||| |  | ||||||||| |||||| ||||| |    
T  9734 atggtaatacaaaaaaccaaaaaaaaaaattctttctttaatcattctaaaatatctgcataatcataacctatacttacttgtc-aaaatcaataatca 9832  T
Q  466 aatcatgcattaataaacccgttgaacacaat 497  Q
    ||||||||||||||||||||||||||||||||    
T  9833 aatcatgcattaataaacccgttgaacacaat 9864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 171; Significance: 1e-91; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 156 - 495
Target Start/End: Complemental strand, 15770279 - 15769942
Alignment:
Q  156 agccgtaattggaccgttgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttc-aaaagaacatcctttcgtcc 254  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||| |||||||||||||||    
T  15770279 agccgtaattgggtcgttgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgcttttcgcttttcaaaaaaaacatcctttcgtcc 15770180  T
Q  255 cgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttg 353  Q
    |||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||  ||||| |||||    
T  15770179 cgcccgagataaaagtgaactggggtagggctttttgctttaag-aattgtcatcattaataaaaaggtcgttttgatcccaactttattttta-ttttg 15770082  T
Q  354 tgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaa 453  Q
    ||||| |||||||||||||||||||| ||||||| ||         |  |  |||||||||||||| ||||||||||||||||||  | ||||||||| |    
T  15770081 tgcttcttcttggaaaatggtaatac-aaaaaca-aaaccaaaaaattctttaatcattctcaaatatctgcataatcataacttgtacttacttgtc-a 15769985  T
Q  454 aaatcgat-aataaatcatgcattaataaacccgttgaacaca 495  Q
    ||||| || ||||||||||||||||||||||||||||||||||    
T  15769984 aaatcaataaataaatcatgcattaataaacccgttgaacaca 15769942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 230 - 495
Target Start/End: Complemental strand, 42634530 - 42634269
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg--tt 327  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||    
T  42634530 ttttcaaaa-aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttactttaagaaattgtcatcattaataaaaaggtcgtttt 42634432  T
Q  328 tgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcat 427  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||         |  |  |||||||||||||| |||||||    
T  42634431 tgatcccgactttgctttta-ttttgtgctttttcttggaaaatggtaatacaaaaaaccaaa---aaatctttctttaatcattctcaaatatctgcat 42634336  T
Q  428 aatcataactttcatttacttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacaca 495  Q
    |||||||||||  | ||||||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  42634335 aatcataacttatacttacttgtc-aaaatcaacaataaatcatgcattaataaacccgttgaacaca 42634269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 230 - 495
Target Start/End: Original strand, 8814449 - 8814710
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg--tt 327  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||  ||    
T  8814449 ttttcaaaa-aacatcgtttcgtcccgcccgagatgaaagtgaactggtgtagggctttttactttaagaaattgtcatcattaataaaaatgtcgtttt 8814547  T
Q  328 tgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcat 427  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||         |  |  |||||||||||||| |||||||    
T  8814548 tgatcccgactttgctttta-ttttgtgctttttcttggaaaatggtaatacaaaaaaccaaa---aaatctttctttaatcattctcaaatatctgcat 8814643  T
Q  428 aatcataactttcatttacttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacaca 495  Q
    |||||||||||  | ||||||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  8814644 aatcataacttatacttacttgtc-aaaatcaacaataaatcatgcattaataaacccgttgaacaca 8814710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 230 - 497
Target Start/End: Complemental strand, 23882852 - 23882587
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaat-aaaaaggtcg-tt 327  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| ||    
T  23882852 ttttcaaaaaaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag-aattgtcatcatttataaaaaaggtcgttt 23882754  T
Q  328 tgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcat 427  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  ||         |  |  |||||||||||||| |||||||    
T  23882753 tgatcccgactttgctttta-ttttgtgctttttcttggaaaatggtaacacaaaaaaccaaa--aaaatctttctttaatcattctcaaatatctgcat 23882657  T
Q  428 aatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacacaat 497  Q
    |||||||||||  | ||||||||| |||||| ||||| ||||||||||||||||||||||||||| |||||    
T  23882656 aatcataacttatacttacttgtc-aaaatcaataatcaaatcatgcattaataaacccgttgaaaacaat 23882587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 175 - 497
Target Start/End: Complemental strand, 34136424 - 34136096
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa----catcctttcgtcccgcccgagatgaaagt 270  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||| ||    |||||||||||||||||||||||||||||    
T  34136424 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgcttttcgcttttcaaaaaaaaaaacatcctttcgtcccgcccgagatgaaagt 34136325  T
Q  271 gaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttggaaa 369  Q
    || ||  ||||||||||||||||||||| | | || ||||||||||||||||||| |||||||||||||||  ||||| |||||||||||||  || |||    
T  34136324 gatcttatgtagggctttttgctttaagtattggttatcattaataaaaaggtcgttttgatcccgacttt-atttta-ttttgtgcttttt-atgaaaa 34136228  T
Q  370 atggtaatacaaaaaacagaagnnnnnnnntaa----taaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat- 464  Q
    |||||||||||||||||  ||          ||    |  ||||||||||| || | ||||||||||||||||  | ||||||||| |||||| |||||     
T  34136227 atggtaatacaaaaaaccaaaaaaaaaaaaaaaaatctttaatcattctcatatatttgcataatcataacttgtacttacttgtc-aaaatcaataatc 34136129  T
Q  465 aaatcatgcattaataaacccgttgaacacaat 497  Q
    |||||||||||||||||||||||||||||||||    
T  34136128 aaatcatgcattaataaacccgttgaacacaat 34136096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 175 - 493
Target Start/End: Complemental strand, 13268065 - 13267750
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa--catcctttcgtcccgcccgagatgaaagtga 272  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||| ||| || |||| |||| ||  ||||||||||||||||||||||||||| |||    
T  13268065 ttgacgttccttccgctactttttgttcaattaatatttgtttgttgattttcgcttttaaaaaaaaaacatcctttcgtcccgcccgagatgaaattga 13267966  T
Q  273 actggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttggaaaat 371  Q
     || |||||||||||||||||||||| | | |||||| ||||||||||||||| ||| |||||||||||  ||||| |||||||||||||| || |||||    
T  13267965 tcttgtgtagggctttttgctttaagtattggtcatctttaataaaaaggtcgtttttatcccgacttt-atttta-ttttgtgctttttc-tgaaaaat 13267869  T
Q  372 ggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaatca 470  Q
    |||||||||||||||  ||         |  |  ||||||||||| || |||||||||||||| |||  | ||||||||| |||||| ||||| ||||||    
T  13267868 ggtaatacaaaaaaccaaa---aagaatttctttaatcattctcatatatctgcataatcatagcttgtacttacttgtc-aaaatcaataatcaaatca 13267773  T
Q  471 tgcattaataaacccgttgaaca 493  Q
    |||||||||||||||||||||||    
T  13267772 tgcattaataaacccgttgaaca 13267750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 235 - 386
Target Start/End: Complemental strand, 3427946 - 3427795
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcc 333  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| || |||||    
T  3427946 aaaaaaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag-aattgtcatcattaataaaaaagtcgcttcgatcc 3427848  T
Q  334 cgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    |||||||||||||  |||| |||||||||| | ||||||||||||||||||||    
T  3427847 cgactttgctttttattttttgctttttctggaaaaatggtaatacaaaaaac 3427795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 243 - 387
Target Start/End: Complemental strand, 27973054 - 27972912
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgtttgatcccgactttgc 342  Q
    ||||||||||||| ||||||| | ||||||||| || ||||||||||||||||  | | || ||||||||||| ||||||||| |||||||||||||||     
T  27973054 atcctttcgtcccacccgagacggaagtgaacttgtttagggctttttgcttttcgtattt-tcatcattaatgaaaaggtcgcttgatcccgactttg- 27972957  T
Q  343 ttttatttttgtgctttttcttggaaaatggtaatacaaaaaaca 387  Q
    ||||||||||||||||||||| | |||||||||||||||||||||    
T  27972956 ttttatttttgtgctttttctggaaaaatggtaatacaaaaaaca 27972912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 230 - 495
Target Start/End: Original strand, 842570 - 842824
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaag-gtcgt-t 327  Q
    ||||||||||||  |||||||||||||||| ||| |||||||||||  ||||||||| ||||||| | ||| |||||||||||||||||||  ||||| |    
T  842570 ttttcaaaagaa--tcctttcgtcccgcccaagacgaaagtgaacttatgtagggctctttgcttcatgaa-ttgtcatcattaataaaaaaagtcgtct 842666  T
Q  328 tgatcccgactttgcttttatttttgtgct-ttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgca 426  Q
    |||||||||| |||||||||||||  |||| ||||||   |||||||| |||||||||||  ||          || |||||||||||||||| ||| ||    
T  842667 tgatcccgaccttgcttttatttta-tgctcttttctgaaaaaatggtgatacaaaaaaccaaa----------aaaaaaatcattctcaaatatctaca 842755  T
Q  427 taatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacaca 495  Q
    ||||||||||||  | ||||||||| |||||| ||||| |||||||||||||||||||||||||||||||    
T  842756 taatcataacttatacttacttgtc-aaaatcaataatcaaatcatgcattaataaacccgttgaacaca 842824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 230 - 495
Target Start/End: Original strand, 849746 - 850000
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaag-gtcgt-t 327  Q
    ||||||||||||  |||||||||||||||| ||| |||||||||||  ||||||||| ||||||| | ||| |||||||||||||||||||  ||||| |    
T  849746 ttttcaaaagaa--tcctttcgtcccgcccaagacgaaagtgaacttatgtagggctctttgcttcatgaa-ttgtcatcattaataaaaaaagtcgtct 849842  T
Q  328 tgatcccgactttgcttttatttttgtgct-ttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgca 426  Q
    |||||||||| |||||||||||||  |||| ||||||   |||||||| |||||||||||  ||          || |||||||||||||||| ||| ||    
T  849843 tgatcccgaccttgcttttatttta-tgctcttttctgaaaaaatggtgatacaaaaaaccaaa----------aaaaaaatcattctcaaatatctaca 849931  T
Q  427 taatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacaca 495  Q
    ||||||||||||  | ||||||||| |||||| ||||| |||||||||||||||||||||||||||||||    
T  849932 taatcataacttatacttacttgtc-aaaatcaataatcaaatcatgcattaataaacccgttgaacaca 850000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 230 - 495
Target Start/End: Original strand, 1207750 - 1208004
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaag-gtcgt-t 327  Q
    ||||||||||||  |||||||||||||||| ||| |||||||||||  ||||||||| ||||||| | ||| |||||||||||||||||||  ||||| |    
T  1207750 ttttcaaaagaa--tcctttcgtcccgcccaagacgaaagtgaacttatgtagggctctttgcttcatgaa-ttgtcatcattaataaaaaaagtcgtct 1207846  T
Q  328 tgatcccgactttgcttttatttttgtgct-ttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgca 426  Q
    |||||||||| |||||||||||||  |||| ||||||   |||||||| |||||||||||  ||          || |||||||||||||||| ||| ||    
T  1207847 tgatcccgaccttgcttttatttta-tgctcttttctgaaaaaatggtgatacaaaaaaccaaa----------aaaaaaatcattctcaaatatctaca 1207935  T
Q  427 taatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacaca 495  Q
    ||||||||||||  | ||||||||| |||||| ||||| |||||||||||||||||||||||||||||||    
T  1207936 taatcataacttatacttacttgtc-aaaatcaataatcaaatcatgcattaataaacccgttgaacaca 1208004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 243 - 497
Target Start/End: Original strand, 12587673 - 12587924
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttg 341  Q
    ||||||||||||||||| ||  |||||| ||||  | ||||||||||||||| | | | |   |||||||||||||| ||||| || |||||||||||||    
T  12587673 atcctttcgtcccgcccaaggcgaaagttaactaatttagggctttttgcttcaggcattctccatcattaataaaa-ggtcgcttcgatcccgactttg 12587771  T
Q  342 cttttatttttgtgctttttcttggaaaa-tggtaa-tacaaaaaacagaagnnnnnnnntaataa-aatcattctcaaatgtctgcataatcataactt 438  Q
    || ||  ||||||||||||||| | |||| |||||| ||||||||||  ||          ||||| ||||||| |||||| ||||||||||||||||||    
T  12587772 ctctttattttgtgctttttctagaaaaaatggtaaatacaaaaaaccaaaaaa-------aataataatcattttcaaatatctgcataatcataactt 12587864  T
Q  439 tcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacacaat 497  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  12587865 tcatttacttgtcaaaaatcaataatcaaatcatgcattaataaacccgttgaacacaat 12587924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 196 - 497
Target Start/End: Complemental strand, 16269605 - 16269294
Alignment:
Q  196 tttgttcaaataatgt-ttgtttgttgctttgcgtttttcaaaagaaca-tcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgct 293  Q
    |||||||||||||||| |||||||||| ||| | |||||||||| || | |||| |||| | |||| | | ||||||||||| |||||||||| ||||||    
T  16269605 tttgttcaaataatgtgttgtttgttgattttcatttttcaaaaaaaaaatcctctcgttctgcccaaaacgaaagtgaacttgtgtagggctctttgct 16269506  T
Q  294 ttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttgg-aaaatggtaatacaaaaaa--caga 389  Q
    ||||| |  |  ||||||||||||||| |||| ||||||||||||||||  |||  ||| |||||||||||||| |||||||||||||||||||  || |    
T  16269505 ttaagtatcttccatcattaataaaaaagtcgctttgatcccgactttg--tttcatttcgtgctttttcttggaaaaatggtaatacaaaaaaaccaaa 16269408  T
Q  390 a------gnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaa 482  Q
    |               || |  ||||||| |||||| ||||||||||||||| ||||||||||||||| |||||| | ||| ||||||||||||||||||    
T  16269407 aaaattctttttcttttattttaatcattttcaaatatctgcataatcataattttcatttacttgtc-aaaatcaaaaatcaaatcatgcattaataaa 16269309  T
Q  483 cccgttgaacacaat 497  Q
    |||||||||||||||    
T  16269308 cccgttgaacacaat 16269294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 406 - 495
Target Start/End: Complemental strand, 3427757 - 3427668
Alignment:
Q  406 aatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacaca 495  Q
    ||||||| |||||| |||||||||||||||||||||||||| |||| |||||| |||||  ||||||||||||||||||||||||||||||    
T  3427757 aatcattttcaaatatctgcataatcataactttcatttacatgtc-aaaatcaataatcgaatcatgcattaataaacccgttgaacaca 3427668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 195 - 386
Target Start/End: Complemental strand, 565989 - 565801
Alignment:
Q  195 ttttgttcaaataat--gtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgc 292  Q
    |||||||||||||||  ||||||||||||||||  ||||||| ||| || ||||||||||||| ||||||  || |||||| | || ||||| |||||||    
T  565989 ttttgttcaaataatatgtttgtttgttgctttatgtttttccaaaaaa-atcctttcgtcccacccgaggcgagagtgaatttgtttagggatttttgc 565891  T
Q  293 tttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    ||  |   ||| ||||||||| | ||| |||||| ||||||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||    
T  565890 tt--atgtattttcatcattagtgaaa-ggtcgtcttgatcccgactttg-ttttatttt-gtgctttttctggaaaaatggtaatacaaaaaac 565801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 385
Target Start/End: Complemental strand, 5205919 - 5205779
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    ||||||||||||| ||||||| | ||||||||| || |||||||||||||| ||   | || ||||||||||| |||||||||| ||| ||||||| ||     
T  5205919 atcctttcgtcccacccgagacggaagtgaacttgtttagggctttttgctgtatctattt-tcatcattaatgaaaaggtcgtcttggtcccgacctt- 5205822  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaaa 385  Q
    |||||||||| ||||||||||| | |||||||||||||||||||    
T  5205821 cttttatttt-gtgctttttctggaaaaatggtaatacaaaaaa 5205779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 208 - 386
Target Start/End: Original strand, 38413397 - 38413573
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||||||| || ||||||||||||| ||||||  ||||||||| | || ||||||||||||||| | |  ||| |||    
T  38413397 atgtttgtttgttgctttatgtttttcaaaaaaaaatcctttcgtcccacccgaggcgaaagtgaatttgtttagggctttttgcttcatg-tattttca 38413495  T
Q  308 tcattaataaaaaggtcgt-ttgatcccgactttgcttttatttttgtgctttttcttg-gaaaatggtaatacaaaaaac 386  Q
    ||||||||  ||||||||| | ||||||||| | | ||||| ||||||||||| ||| |  ||||||||||||||||||||    
T  38413496 tcattaat-gaaaggtcgtctcgatcccgacctag-tttta-ttttgtgctttgtctggaaaaaatggtaatacaaaaaac 38413573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 27437794 - 27437934
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    ||||||||||||| ||||||| | ||||||||| || |||||||||||||| ||   | || ||||||||||| |||||| ||| ||| ||||||| ||     
T  27437794 atcctttcgtcccacccgagacggaagtgaacttgtttagggctttttgctgtatctattt-tcatcattaatgaaaaggccgtcttggtcccgacctt- 27437891  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaaa 385  Q
    |||||||||| ||||||||||| | |||||||||||||||||||    
T  27437892 cttttatttt-gtgctttttctggaaaaatggtaatacaaaaaa 27437934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 282 - 494
Target Start/End: Complemental strand, 16486273 - 16486061
Alignment:
Q  282 gggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttgg-aaaatggtaatac 379  Q
    ||||||||||||||| ||| || |||||||||||||| |||||| |||||||||||||| | ||||| ||||||||||||| |||| ||||| |||||||    
T  16486273 gggctttttgctttatgaattt-tcatcattaataaagaggtcgttttgatcccgacttcg-tttta-ttttgtgcttttttttggaaaaatcgtaatac 16486177  T
Q  380 aaaaaa-cagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcatta 477  Q
    |||||| || ||         |  |  |||||||  ||||||||||||||||||||||||| || |||||| | |||| | ||||| | |||||||||||    
T  16486176 aaaaaaccaaaaaaaatctttttctttaatcatttccaaatgtctgcataatcataactttaatatacttgac-aaaaccaataatcatatcatgcatta 16486078  T
Q  478 ataaacccgttgaacac 494  Q
    |||||||| ||||||||    
T  16486077 ataaacccattgaacac 16486061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 243 - 385
Target Start/End: Complemental strand, 4944659 - 4944519
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    ||||||||||||| ||||||  || |||||| | || ||||||||||||||||| |  ||| |||||||||||  ||||||||| | |||||||||||||    
T  4944659 atcctttcgtcccacccgaggcgagagtgaatttgtttagggctttttgctttatg-tattttcatcattaat-gaaaggtcgtctcgatcccgactttg 4944562  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaaa 385  Q
     || || |||||| |||||||| | |||||||||||||||||||    
T  4944561 tttcta-ttttgtactttttctggaaaaatggtaatacaaaaaa 4944519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 384
Target Start/End: Original strand, 13835228 - 13835367
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttg 341  Q
    |||||| |||||| ||||||  || |||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||| | ||||||||| |||    
T  13835228 atccttccgtcccacccgaggcgagagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtctcgatcccgaccttg 13835325  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaa 384  Q
     ||||||||| ||||||||||| | ||||||||||||||||||    
T  13835326 tttttatttt-gtgctttttctggaaaaatggtaatacaaaaa 13835367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 29025984 - 29026123
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    ||||||||||||| ||||||| | |||||| || || ||||||||||||||||| |  ||| |||||||||||  ||||| | | | ||||||||| ||     
T  29025984 atcctttcgtcccacccgagacggaagtgagcttgtttagggctttttgctttacg-tattttcatcattaat-gaaaggccatctcgatcccgacctt- 29026080  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaaa 385  Q
    |||||| ||||||||||||||| | |||||||||||||||||||    
T  29026081 ctttta-ttttgtgctttttctggaaaaatggtaatacaaaaaa 29026123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 1958037 - 1958126
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag 298  Q
    |||||||||||||| |||  | |||| |||| || ||| ||||||||| ||||||||||||||||||| || ||| |||||||||||||||    
T  1958037 atgtttgtttgttgttttatgcttttaaaaaaaa-atcatttcgtcccacccgagatgaaagtgaacttgtttagtgctttttgctttaag 1958126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 386
Target Start/End: Complemental strand, 1894663 - 1894620
Alignment:
Q  343 ttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    ||||||||| ||||||||||| | ||||||||||||||||||||    
T  1894663 ttttattttagtgctttttctggaaaaatggtaatacaaaaaac 1894620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 565731 - 565702
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  565731 aaatcatgcattaataaacccgttgaacac 565702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 4944451 - 4944422
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  4944451 aaatcatgcattaataaacccgttgaacac 4944422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 27438003 - 27438032
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  27438003 aaatcatgcattaataaacccgttgaacac 27438032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 27972838 - 27972809
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  27972838 aaatcatgcattaataaacccgttgaacac 27972809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 29026193 - 29026222
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  29026193 aaatcatgcattaataaacccgttgaacac 29026222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 38413640 - 38413669
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  38413640 aaatcatgcattaataaacccgttgaacac 38413669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 171; Significance: 1e-91; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 156 - 495
Target Start/End: Original strand, 1546012 - 1546349
Alignment:
Q  156 agccgtaattggaccgttgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttc-aaaagaacatcctttcgtcc 254  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||| |||||||||||||||    
T  1546012 agccgtaattgggtcgttgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgcttttcgcttttcaaaaaaaacatcctttcgtcc 1546111  T
Q  255 cgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttg 353  Q
    |||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||  ||||| |||||    
T  1546112 cgcccgagataaaagtgaactggggtagggctttttgctttaag-aattgtcatcattaataaaaaggtcgttttgatcccaactttattttta-ttttg 1546209  T
Q  354 tgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaa 453  Q
    ||||| |||||||||||||||||||| ||||||| ||         |  |  |||||||||||||| ||||||||||||||||||  | ||||||||| |    
T  1546210 tgcttcttcttggaaaatggtaatac-aaaaaca-aaaccaaaaaattctttaatcattctcaaatatctgcataatcataacttgtacttacttgtc-a 1546306  T
Q  454 aaatcgat-aataaatcatgcattaataaacccgttgaacaca 495  Q
    ||||| || ||||||||||||||||||||||||||||||||||    
T  1546307 aaatcaataaataaatcatgcattaataaacccgttgaacaca 1546349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 230 - 495
Target Start/End: Complemental strand, 619415 - 619154
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg--tt 327  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||    
T  619415 ttttcaaaa-aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttactttaagaaattgtcatcattaataaaaaggtcgtttt 619317  T
Q  328 tgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcat 427  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||         |  |  ||||| |||||||| |||||||    
T  619316 tgatcccgactttgctttta-ttttgtgctttttcttggaaaatggtaatacaaaaaaccaaa---aaatctttctttaatcagtctcaaatatctgcat 619221  T
Q  428 aatcataactttcatttacttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacaca 495  Q
    |||||||||||  | ||||||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  619220 aatcataacttatacttacttgtc-aaaatcaacaataaatcatgcattaataaacccgttgaacaca 619154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 235 - 497
Target Start/End: Original strand, 27514175 - 27514434
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcc 333  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  27514175 aaaaaaacatcccttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcctcattaataaaaaggtcgttttgatcc 27514274  T
Q  334 cgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcat 433  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||         |  |  |||||||||||||| |||||||||||||    
T  27514275 cgactttgctttta-ttttgtgctttttcttggaaaatggtaatacaaaaaaccaaa---aaatctttctttaatcattctcaaatatctgcataatcat 27514370  T
Q  434 aactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacacaat 497  Q
    |||||  | ||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||    
T  27514371 aacttatacttacttgtc-aaaatcaataatcaaatcatgcattaataaacccgttgaacacaat 27514434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 230 - 497
Target Start/End: Complemental strand, 16821066 - 16820803
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaat-aaaaaggtcg-tt 327  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| ||    
T  16821066 ttttcaaaa-aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag-aattgtcatcatttataaaaaaggtcgttt 16820969  T
Q  328 tgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcat 427  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||         |  |  |||||||||||||| |||||||    
T  16820968 tgatcccgactttgctttta-ttttgtgctttttcttggaaaatggtaatacaaaaaaccaaa---aaatctttctttaatcattctcaaatatctgcat 16820873  T
Q  428 aatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacacaat 497  Q
    |||||||||||  | ||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||    
T  16820872 aatcataacttatacttacttgtc-aaaatcaataatcaaatcatgcattaataaacccgttgaacacaat 16820803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 131 - 448
Target Start/End: Original strand, 22326640 - 22326955
Alignment:
Q  131 tggtattgcgacacatggggtggtcagccgtaattggaccgttgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtt 230  Q
    |||||||||||||||||| ||||| ||||||||||||  || |||||||||||||||| ||||||||||||||||||||||||||||||||||||  | |    
T  22326640 tggtattgcgacacatggagtggttagccgtaattgggtcgctgttgacgttccttccactactttttgttcaaataatgtttgtttgttgctttttgct 22326739  T
Q  231 tttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttg 329  Q
    |||||||| || || ||||||| ||| ||||||||||||  |||| || |||||| |||||||| ||| | ||  ||||||||||||||| |||| ||||    
T  22326740 tttcaaaa-aaaattctttcgttccgtccgagatgaaagcaaacttgtttagggcattttgcttcaagcattttccatcattaataaaaaagtcgttttg 22326838  T
Q  330 atcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataa 429  Q
    |||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||| ||         |  |  |||||||||||||| |||||||||    
T  22326839 atcccgactttg-ttttcattttgtgctttttcttggaaaatggtaatacaaaaaaca-aaaaaaaaatcttctttaatcattctcaaatatctgcataa 22326936  T
Q  430 tcataactttcatttactt 448  Q
    |||||||||||||||||||    
T  22326937 tcataactttcatttactt 22326955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 175 - 386
Target Start/End: Original strand, 19716417 - 19716627
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaac 274  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||| |  |||||||| |||||||||||||||||||| ||| |||||||||||    
T  19716417 ttgacgttccttccaccactttttgttcaaataatgtttgtttgttgcttttctcttttcaaa-gaacatcctttcgtcccgcctgaggtgaaagtgaac 19716515  T
Q  275 tggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttt-tcttggaaaatg 372  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||| ||||  |||||||||||| ||| | ||||||    
T  19716516 tggtgtagggctttttgctttaag-aattgtcatcattaataaaaaggtcgttttgatcccgac-ttggttttcattttgtgcttttctctggaaaaatg 19716613  T
Q  373 gtaatacaaaaaac 386  Q
    ||||||||||||||    
T  19716614 gtaatacaaaaaac 19716627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 173 - 384
Target Start/End: Complemental strand, 27071579 - 27071368
Alignment:
Q  173 tgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa-catcctttcgtcccgcccgagatgaaagtg 271  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||| || |||| |||| || ||||||||||| |||||||||| |||||||    
T  27071579 tgttgacgttccttccgctactttttgttcaattaatgtttgtttgttacttttcgcttttaaaaaaaaacatcctttcgttccgcccgagacgaaagtg 27071480  T
Q  272 aactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttggaaaa 370  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| ||||   ||||||||| |||||||||||    
T  27071479 aacttgtgtagggctttttgctttaag-aattgtcatcattaataaaaaagtcgttttgatcccgactttg-ttttcactttgtgcttcttcttggaaaa 27071382  T
Q  371 tggtaatacaaaaa 384  Q
    ||||||||||||||    
T  27071381 tggtaatacaaaaa 27071368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 175 - 495
Target Start/End: Complemental strand, 18946744 - 18946413
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa--------catcctttcgtcccgcccgagatga 266  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||| || ||||||||| ||        ||| |||||||||||||||||||||    
T  18946744 ttgacgttccttccgctactttttgttcaattaaggtttgtttgttgcttttcgcttttcaaaaaaaaaaaaaaacattctttcgtcccgcccgagatga 18946645  T
Q  267 aagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttg 365  Q
    |||||| || |||||||||||||||||||||| | | |||||||||||||||||||||| ||||| |||||||||  ||||| |||||||||||||| ||    
T  18946644 aagtgatcttgtgtagggctttttgctttaagtattggtcatcattaataaaaaggtcgttttgagcccgacttt-atttta-ttttgtgctttttc-tg 18946548  T
Q  366 gaaaatggtaatacaaaaaa-cagaagnnnnnnnntaataa----aatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcga 460  Q
     ||||||||||||||||||| || ||         ||||||    ||| ||| |||||| ||||||||||||||||||  | ||||||||| |||||| |    
T  18946547 aaaaatggtaatacaaaaaaccaaaaaattaaaaataataataataattattttcaaatatctgcataatcataacttgtacttacttgtc-aaaatcaa 18946449  T
Q  461 t-aataaatcatgcattaataaacccgttgaacaca 495  Q
    | ||||||||||||||||||||||||||||||||||    
T  18946448 taaataaatcatgcattaataaacccgttgaacaca 18946413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 230 - 495
Target Start/End: Complemental strand, 24146962 - 24146704
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-ttt 328  Q
    ||||||||| ||||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||| |||    
T  24146962 ttttcaaaaaaacatcctttcatcccgcccaggatgaaagtgaactagtgtagggctttttgctttaag-atttgtcatcattaataaaaaggtcgtttt 24146864  T
Q  329 gatcccgactttgcttttatttttgtgctttttcttgg-aaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcat 427  Q
    ||||||||||||  ||||  |||||||||||||||||| ||||||||||||||||||||  ||         ||||  |||||||| ||||| |||||||    
T  24146863 gatcccgacttt-attttcattttgtgctttttcttggaaaaatggtaatacaaaaaacccaa-----aaaataat-taatcattcacaaatatctgcat 24146771  T
Q  428 aatcataactttcatttacttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacaca 495  Q
    ||||||||||||  |||||||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  24146770 aatcataacttttgtttacttgtc-aaaatcaacaataaatcatgcattaataaacccgttgaacaca 24146704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 243 - 495
Target Start/End: Complemental strand, 20456279 - 20456027
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtc-gtttgatcccgactttg 341  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||  ||||||||||||||||    
T  20456279 atcctttcgtcccgcccgagatgaaagtgaacttgtgtagggctttttgctttaag-aattatcatcattaataaaaaggtcattttgatcccgactttg 20456181  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaaa-cagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttc 440  Q
     ||||  |||||||||| ||||||||||||||||||| |||||| || ||         |  |  ||||||| |||||| ||||||||||||||||||      
T  20456180 -ttttcattttgtgcttcttcttggaaaatggtaatataaaaaaccaaaaaaaaaatctttctttaatcattgtcaaatatctgcataatcataacttat 20456082  T
Q  441 atttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacaca 495  Q
    | ||||||||| |||||| ||||| |||||||||||||||||||||||||||||||    
T  20456081 acttacttgtc-aaaatcaataatcaaatcatgcattaataaacccgttgaacaca 20456027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 240 - 495
Target Start/End: Complemental strand, 20054071 - 20053820
Alignment:
Q  240 aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgact 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||| |||| ||||||||| |||    
T  20054071 aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggcttttttctttcag-aattgtcatcattaataaaaatgtcgttttgatcccaact 20053973  T
Q  339 ttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactt 438  Q
    ||| ||||| ||||||||||||||| | |||||||||||||||| |||   |         |  |  |||||||||||||| | ||||||||||||||||    
T  20053972 ttg-tttta-ttttgtgctttttctggaaaaatggtaatacaaagaac--caattttttttttctttaatcattctcaaatatttgcataatcataactt 20053877  T
Q  439 tcatttacttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacaca 495  Q
      | || ||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  20053876 gtacttgcttgtcaaaaatcaacaataaatcatgcattaataaacccgttgaacaca 20053820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 175 - 497
Target Start/End: Complemental strand, 22776513 - 22776177
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttc---aaaagaacatcctttcgtcccgcccgagatgaaagtg 271  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||| || |||||   |||| ||||||||||| ||||||||||||||||||||    
T  22776513 ttgacattccttccgctactttttgttcaattaatgtttgtttgttgcttttcgcttttcaaaaaaaaaacatcctttcatcccgcccgagatgaaagtg 22776414  T
Q  272 aactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttgcttttatt----------tttgtgctttt 360  Q
    | || |||||||| ||||||||||||| | ||||||||||||||||||||||||| |||||| |||||||  |||| ||          |||||||||||    
T  22776413 atcttgtgtagggttttttgctttaag-atttgtcatcattaataaaaaggtcgtcttgatctcgactttttttttttttttttttaaatttgtgctttt 22776315  T
Q  361 tcttgg-aaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcg 459  Q
    |||||| ||||||||||||||||||||  ||         |  |  ||||||||||| || ||||| ||||||||||||  | ||||||||| ||||||     
T  22776314 tcttggaaaaatggtaatacaaaaaaccaaaaaaaattctttctttaatcattctcatatatctgcttaatcataacttgtacttacttgtc-aaaatca 22776216  T
Q  460 ataat-aaatcatgcattaataaacccgttgaacacaat 497  Q
    ||||| || | ||||||||||||||||||||||| ||||    
T  22776215 ataatcaatttatgcattaataaacccgttgaacgcaat 22776177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 247 - 497
Target Start/End: Original strand, 18437692 - 18437939
Alignment:
Q  247 tttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttgcttt 345  Q
    ||||||||||||  ||| |||||||||||  ||||||||||||||||||||| | |||| |||||||||||||||||||||| ||||||||||||| |||    
T  18437692 tttcgtcccgcca-agacgaaagtgaacttatgtagggctttttgctttaagca-ttgttatcattaataaaaaggtcgttttgatcccgactttgtttt 18437789  T
Q  346 tatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcattta 445  Q
     ||||| |||||| |||||||||||||||||||||||||| |  |         |  |  ||||||||| |||| ||||||||||||||||||  | |||    
T  18437790 catttt-gtgcttcttcttggaaaatggtaatacaaaaaa-accaaaaaaaaatttctttaatcattcttaaatatctgcataatcataacttgtactta 18437887  T
Q  446 cttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacacaat 497  Q
    |||||| |||||| ||||| || ||||||||||||||||||||||||||||||    
T  18437888 cttgtc-aaaatcaataatcaattcatgcattaataaacccgttgaacacaat 18437939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 235 - 340
Target Start/End: Complemental strand, 20044142 - 20044037
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcc 333  Q
    |||| ||||||||||| |||| |||  |||||||||||||| ||||||||||||||| |||||| | |||||||||||||||||||||||| ||||||||    
T  20044142 aaaaaaacatcctttcatcccacccaggatgaaagtgaactagtgtagggctttttgttttaag-atttgtcatcattaataaaaaggtcgttttgatcc 20044044  T
Q  334 cgacttt 340  Q
    |||||||    
T  20044043 cgacttt 20044037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 230 - 382
Target Start/End: Original strand, 18912381 - 18912531
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-ttt 328  Q
    ||||||||||||  |||||||||||||||| |||  ||||||||||  ||||||||| ||||||| | | ||||||||||||||||||| |  ||| |||    
T  18912381 ttttcaaaagaa--tcctttcgtcccgcccaagacaaaagtgaacttatgtagggctctttgcttcatg-aattgtcatcattaataaatatatcgtttt 18912477  T
Q  329 gatcccgactttgcttttatttttgtgctttttct-tggaaaatggtaatacaaa 382  Q
    ||||||||||||| ||||| |||| |||||||||| || ||||||||||||||||    
T  18912478 gatcccgactttgatttta-ttttatgctttttctctgaaaaatggtaatacaaa 18912531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 406 - 495
Target Start/End: Complemental strand, 20043987 - 20043898
Alignment:
Q  406 aatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacaca 495  Q
    |||||||||||||| ||||||||||||||||||  | ||||||||| |||||| ||||| |||||||||||||||||||||||||||||||    
T  20043987 aatcattctcaaatatctgcataatcataacttgtacttacttgtc-aaaatcaataatcaaatcatgcattaataaacccgttgaacaca 20043898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 406 - 495
Target Start/End: Complemental strand, 27071331 - 27071242
Alignment:
Q  406 aatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacaca 495  Q
    |||||||||||||| ||||||||||||||||||  | ||||||||| |||||| ||||| |||||||||||| ||||||||||||||||||    
T  27071331 aatcattctcaaatatctgcataatcataacttgtacttacttgtc-aaaatcaataatcaaatcatgcattgataaacccgttgaacaca 27071242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 208 - 384
Target Start/End: Original strand, 5990187 - 5990363
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaaca--tcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgt 305  Q
    ||||||||||||||||||  ||||| ||||| || |  |||||||||||| ||||||  || |||||| | || ||||||||||||||||| | | || |    
T  5990187 atgtttgtttgttgctttatgttttccaaaaaaaaaaatcctttcgtcccacccgaggcgagagtgaatttgtttagggctttttgctttatgtattt-t 5990285  T
Q  306 catcattaataaaaaggtcgt-ttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaa 384  Q
    |||||||||| ||| |||||  |||||| |||| ||| ||||||||| ||||||||||| | ||||||||||||||||||    
T  5990286 catcattaatgaaa-ggtcgccttgatctcgaccttgtttttatttt-gtgctttttctggaaaaatggtaatacaaaaa 5990363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 190 - 386
Target Start/End: Original strand, 28355893 - 28356094
Alignment:
Q  190 ctactttttgttcaaataat--gtttgtttgttgctttgcgtttttcaaaag-------aacatcctttcgtcccgcccgagatgaaagtgaactggtgt 280  Q
    ||||||||||||||| ||||  ||||||||||||||||  |||||||||||        || | |||||| |||| || |||  ||||||||| | || |    
T  28355893 ctactttttgttcaattaatatgtttgtttgttgctttatgtttttcaaaaacaaaaaaaaaaacctttcctcccacctgaggcgaaagtgaatttgttt 28355992  T
Q  281 agggctttttgctttaagaaattgtcatcattaataaaaaggtcgtttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaataca 380  Q
    |||||||||||||||| | | || ||||||||| | ||| ||||| ||||||||||||||| ||||||||| ||||||||||| | ||||||||||||||    
T  28355993 agggctttttgctttatgtattt-tcatcattagtgaaa-ggtcgcttgatcccgactttg-ttttatttt-gtgctttttctggaaaaatggtaataca 28356088  T
Q  381 aaaaac 386  Q
    ||||||    
T  28356089 aaaaac 28356094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 386
Target Start/End: Original strand, 28307087 - 28307289
Alignment:
Q  190 ctactttttgttcaaataat--gtttgtttgttgctttgcgtttttcaaaag--------aacatcctttcgtcccgcccgagatgaaagtgaactggtg 279  Q
    ||||||||||||||| ||||  ||||||||||||||||  |||||||||||         || | |||||| |||| || |||  ||||||||| | ||     
T  28307087 ctactttttgttcaattaatatgtttgtttgttgctttatgtttttcaaaaacaaaaaaaaaaaacctttcctcccacctgaggcgaaagtgaatttgtt 28307186  T
Q  280 tagggctttttgctttaagaaattgtcatcattaataaaaaggtcgtttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatac 379  Q
    ||||||||||||||||| | | || ||||||||| | ||| ||||| ||||||||||||||| ||||||||| ||||||||||| | |||||||||||||    
T  28307187 tagggctttttgctttatgtattt-tcatcattagtgaaa-ggtcgcttgatcccgactttg-ttttatttt-gtgctttttctggaaaaatggtaatac 28307282  T
Q  380 aaaaaac 386  Q
    |||||||    
T  28307283 aaaaaac 28307289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 243 - 386
Target Start/End: Complemental strand, 27055108 - 27054966
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    ||||||||||||| ||||||| | ||||||||| || |||||||||||||| ||   | || ||||||||||| |||||||||| ||| ||||||| ||     
T  27055108 atcctttcgtcccacccgagacggaagtgaacttgtttagggctttttgctgtatctattt-tcatcattaatgaaaaggtcgtcttggtcccgacctt- 27055011  T
Q  342 cttttatttttgtgctttttcttggaaaa-tggtaatacaaaaaac 386  Q
    |||||||||| ||||||||||| | |||| ||||||||||||||||    
T  27055010 cttttatttt-gtgctttttctggaaaaaatggtaatacaaaaaac 27054966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 387
Target Start/End: Original strand, 16638001 - 16638143
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    |||||| |||||| ||||||  || |||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||| ||||||||||| ||     
T  16638001 atccttccgtcccacccgaggcgagagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtcttgatcccgacctta 16638098  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaaaca 387  Q
     ||||||||| |||||| |||| | |||||||||||||||||||||    
T  16638099 tttttatttt-gtgcttattctggaaaaatggtaatacaaaaaaca 16638143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 386
Target Start/End: Complemental strand, 15649883 - 15649708
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    |||||||||||||| |||  ||||||||||| | |||   |||||||| | ||||| ||||||||||| || |||| |||||||||||| |  |||  ||    
T  15649883 atgtttgtttgttgttttatgtttttcaaaaaatcat---ttcgtcccacgcgagacgaaagtgaacttgtttaggactttttgctttatg-catttcca 15649788  T
Q  308 tcattaat--aaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    ||||||||  ||||| |||| |||||||||||||||| |||||  ||||| |||||||| | |||| |||||||| ||||||    
T  15649787 tcattaataaaaaaaagtcgttttgatcccgactttg-tttta-ctttgtactttttctggaaaaacggtaatacgaaaaac 15649708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 16582927 - 16583101
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||||||  || |||||||| |||| | ||||  || | |||| | || ||| ||||||||||||| |  ||| |||    
T  16582927 atgtttgtttgttgctttatgtttttcaaa--aaaatcctttcatcccactcgaggcgagattgaatttgtttagagctttttgctttatg-tattttca 16583023  T
Q  308 tcattaataaaaaggtcgt-ttgatcccgactttgcttttatttttgtgctttttcttg-gaaaatggtaatacaaaaaa 385  Q
    |||||||| ||| |||||| | | ||||||| ||| ||||| ||||||||||||||| |  |||||||||||||||||||    
T  16583024 tcattaatgaaatggtcgtctcggtcccgaccttg-tttta-ttttgtgctttttctggaaaaaatggtaatacaaaaaa 16583101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 385
Target Start/End: Complemental strand, 16612453 - 16612279
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||||||  || |||||||| |||| | ||||  || | |||| | || ||| ||||||||||||| |  ||| |||    
T  16612453 atgtttgtttgttgctttatgtttttcaaa--aaaatcctttcatcccactcgaggcgagattgaatttgtttagagctttttgctttatg-tattttca 16612357  T
Q  308 tcattaataaaaaggtcgt-ttgatcccgactttgcttttatttttgtgctttttcttg-gaaaatggtaatacaaaaaa 385  Q
    |||||||| ||| |||||| | | ||||||| ||| ||||| ||||||||||||||| |  |||||||||||||||||||    
T  16612356 tcattaatgaaatggtcgtctcggtcccgaccttg-tttta-ttttgtgctttttctggaaaaaatggtaatacaaaaaa 16612279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 386
Target Start/End: Original strand, 27543949 - 27543992
Alignment:
Q  343 ttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    ||||||||| ||||||||||| | ||||||||||||||||||||    
T  27543949 ttttattttagtgctttttctggaaaaatggtaatacaaaaaac 27543992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 453 - 495
Target Start/End: Complemental strand, 15649646 - 15649604
Alignment:
Q  453 aaaatcgataataaatcatgcattaataaacccgttgaacaca 495  Q
    |||||| | ||||||||||||||| ||||||||||||||||||    
T  15649646 aaaatcaacaataaatcatgcattgataaacccgttgaacaca 15649604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 385
Target Start/End: Complemental strand, 25502801 - 25502723
Alignment:
Q  305 tcatcattaataaaaaggtcgt-ttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaa 385  Q
    ||||||||||| ||| |||||| ||||||||||| |||  |||| ||||||||||||| | | |||||||||||||||||||    
T  25502801 tcatcattaatgaaa-ggtcgtcttgatcccgaccttg--tttaattttgtgctttttttggaaaaatggtaatacaaaaaa 25502723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 5990430 - 5990459
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  5990430 aaatcatgcattaataaacccgttgaacac 5990459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 16583175 - 16583204
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  16583175 aaatcatgcattaataaacccgttgaacac 16583204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 16612205 - 16612176
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  16612205 aaatcatgcattaataaacccgttgaacac 16612176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 16638211 - 16638240
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  16638211 aaatcatgcattaataaacccgttgaacac 16638240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 27054917 - 27054888
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  27054917 aaatcatgcattaataaacccgttgaacac 27054888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 28307360 - 28307389
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  28307360 aaatcatgcattaataaacccgttgaacac 28307389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 28356165 - 28356194
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  28356165 aaatcatgcattaataaacccgttgaacac 28356194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 495
Target Start/End: Original strand, 22326956 - 22326984
Alignment:
Q  467 atcatgcattaataaacccgttgaacaca 495  Q
    |||||||||||||||||||||||||||||    
T  22326956 atcatgcattaataaacccgttgaacaca 22326984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 157; Significance: 3e-83; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 173 - 497
Target Start/End: Complemental strand, 19974 - 19653
Alignment:
Q  173 tgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtga 272  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||| ||| || ||||||||| || ||||||||||||| ||||||||||||||||    
T  19974 tgttgacgttcattccactactttttgttcaaataatgtttgtttgttgtttttcgcttttcaaaaaaa-atcctttcgtcccacccgagatgaaagtga 19876  T
Q  273 actggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgc-tttttcttg-gaaa 369  Q
    ||| ||||| |||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| ||||  |||||||| |||||||||  |||    
T  19875 acttgtgtatggctttttgctttaag-aattgtcatcattaataaaaatgtcgttttgatcccgactttg-ttttcattttgtgcttttttcttgaaaaa 19778  T
Q  370 atggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataataaatc 469  Q
    ||||||||||||||||   ||         ||||  ||||||| |||||||||||||||||||||||||||||||||||||| |||||| | ||||||||    
T  19777 atggtaatacaaaaaaacaaaaacaaaaaataat--aatcattttcaaatgtctgcataatcataactttcatttacttgtc-aaaatcaacaataaatc 19681  T
Q  470 atgcattaataaacccgttgaacacaat 497  Q
    ||||||||||||||||||||||||||||    
T  19680 atgcattaataaacccgttgaacacaat 19653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 149; Significance: 2e-78; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 107 - 497
Target Start/End: Original strand, 24693119 - 24693498
Alignment:
Q  107 aatccactaacgggttatattccttggtattgcgacacatggggtggtcagccgtaattggaccgttgttgacgttccttccgctactttttgttcaaat 206  Q
    ||||||||  ||||||||||| | |||||||||||||||||| |||||     ||||||||  ||||||||||||||||||| |||||||||||||||||    
T  24693119 aatccactgtcgggttatattacctggtattgcgacacatggagtggtt----gtaattgggtcgttgttgacgttccttccactactttttgttcaaat 24693214  T
Q  207 aatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtc 306  Q
    ||||||||||||||||||| || ||||||||  || ||| ||||||||||||||||| ||||||| |||  |||||||||| ||||||||||  || |||    
T  24693215 aatgtttgtttgttgcttttcgcttttcaaa--aaaatcatttcgtcccgcccgagacgaaagtggacttatgtagggcttcttgctttaag-tatggtc 24693311  T
Q  307 atcattaataaaaaggtcgttt-gatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataa 405  Q
    |||||||||||||||||||||| ||||||||||||| ||||  |||||||||| |||||||||||||||||||||||||| | ||         |  |      
T  24693312 atcattaataaaaaggtcgtttcgatcccgactttg-ttttcattttgtgcttcttcttggaaaatggtaatacaaaaaaaaaaa----aaaaattcttt 24693406  T
Q  406 aatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacacaat 497  Q
    |||||||||||||| ||||||| ||||||||||  | ||||||||| |||||| || || |||||||||||||||||||||||||||||||||    
T  24693407 aatcattctcaaatatctgcatgatcataacttgtacttacttgtc-aaaatcaatgatcaaatcatgcattaataaacccgttgaacacaat 24693498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 74 - 497
Target Start/End: Original strand, 24702070 - 24702490
Alignment:
Q  74 gcttttcgaaggttgaattcagacacgcaagataatccactaacgggttatattccttggtattgcgacacatggggtggtcagccgtaattggaccgtt 173  Q
    ||||||||||| |||||||||||  ||||| |||||||| |  |||||||||||   |||||||||||||||||| |||||     |||||| |  ||||    
T  24702070 gcttttcgaagattgaattcagatgcgcaatataatccattgtcgggttatattatctggtattgcgacacatggagtggtt----gtaatttggtcgtt 24702165  T
Q  174 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaa 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||  || ||||||| |||  ||| |||| |||| ||||    
T  24702166 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgcttttcgcttttcaaa--aaaatccttttgtcgtgcctgagacgaaattgaa 24702263  T
Q  274 ctggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttgcttttatttttgtgctttttcttggaaaatg 372  Q
    ||  |||||||||||| ||||||||  || ||||||||||||||||||||||||| ||| || |||||| ||||  |||||||||| |||||||||||||    
T  24702264 cttatgtagggcttttcgctttaag-tatggtcatcattaataaaaaggtcgtttcgattccaactttg-ttttcattttgtgcttcttcttggaaaatg 24702361  T
Q  373 gtaatacaaaaaacagaagnnnnnnnntaa-----taaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aa 466  Q
    ||||||||||||| | ||          ||     |  |||||||||||||| ||||||| ||||||||||  | |||||||||  ||||| ||||| ||    
T  24702362 gtaatacaaaaaaaaaaaaaaaaccaaaaaaattctttaatcattctcaaatatctgcatgatcataacttgtacttacttgtc--aaatcaataatcaa 24702459  T
Q  467 atcatgcattaataaacccgttgaacacaat 497  Q
    |||||||||||||||||||||| ||||||||    
T  24702460 atcatgcattaataaacccgttaaacacaat 24702490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 175 - 497
Target Start/End: Complemental strand, 20278399 - 20278075
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa-----catcctttcgtcccgcccgagatgaaag 269  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||  | ||||||||| ||     ||||||||||| ||||||||||||||||    
T  20278399 ttgacggtccttccgctactttttgttcaattaatgtttgtttgttgcttttagcttttcaaaaaaaaaaaacatcctttcgttccgcccgagatgaaag 20278300  T
Q  270 tgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttggaa 368  Q
    ||| || |||||||||||||||||||||| | | | |||||||||||||||||||| |||||||||||||||  ||||| |||||||||||||| || ||    
T  20278299 tgatcttgtgtagggctttttgctttaagtattggccatcattaataaaaaggtcgttttgatcccgacttt-atttta-ttttgtgctttttc-tgaaa 20278203  T
Q  369 aatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaa 467  Q
    ||||||||||||||||||  ||         |  |  ||||||||||| || ||||||||||||||||||  | ||||||||| |||||  ||||| |||    
T  20278202 aatggtaatacaaaaaac-caaaaaaaataattctttaatcattctcatatatctgcataatcataacttgtacttacttgtc-aaaattaataatcaaa 20278105  T
Q  468 tcatgcattaataaacccgttgaacacaat 497  Q
    ||||||||||||||||||||||||||||||    
T  20278104 tcatgcattaataaacccgttgaacacaat 20278075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 208 - 386
Target Start/End: Complemental strand, 30689714 - 30689540
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||  ||| || ||||||| ||||| ||||||||||||||||| |  | ||||||||||||||||| |  ||| |||    
T  30689714 atgtttgtttgttgctttatgttttttcaaaaaaaatccttttgtcccacccgagatgaaagtgaattcatctagggctttttgctttatg-tattttca 30689616  T
Q  308 tcattaataaaaaggtcgtttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    |||||| |  |||||||| ||||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||    
T  30689615 tcattagt-gaaaggtcgcttgatcccgactttg-tttta-ttttgtgctttttctggaaaaatggtaatacaaaaaac 30689540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 243 - 385
Target Start/End: Complemental strand, 3762805 - 3762666
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgtttgatcccgactttgc 342  Q
    ||||||||||||| ||||||| | |||||| || || ||||||||||||||||  | | || ||||||||||| ||||||||| |||||||||||||||     
T  3762805 atcctttcgtcccacccgagacggaagtgagcttgtttagggctttttgcttttcgtattt-tcatcattaatgaaaaggtcgcttgatcccgactttg- 3762708  T
Q  343 ttttatttttgtgctttttcttggaaaatggtaatacaaaaaa 385  Q
    ||||||||| ||||||||||| | |||||||||||||||||||    
T  3762707 ttttatttt-gtgctttttctggaaaaatggtaatacaaaaaa 3762666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 16277292 - 16277432
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    ||||||||||||| ||||||| | ||||||||| || |||||||||||||| ||   | || ||||||||||| |||||||||| ||| ||||||| ||     
T  16277292 atcctttcgtcccacccgagacggaagtgaacttgtttagggctttttgctgtatctattt-tcatcattaatgaaaaggtcgtcttggtcccgacctt- 16277389  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaaa 385  Q
    |||||||||| ||||||||||| | |||||||||||||||||||    
T  16277390 cttttatttt-gtgctttttctggaaaaatggtaatacaaaaaa 16277432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 243 - 384
Target Start/End: Original strand, 35142431 - 35142570
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    |||||| |||||| ||||||  ||||||||| | || ||||||||||||||||| |  ||| |||||||||||  ||||||||| ||||||||||| |||    
T  35142431 atccttccgtcccacccgaggcgaaagtgaatttgtttagggctttttgctttatg-tattttcatcattaat-gaaaggtcgtcttgatcccgaccttg 35142528  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaa 384  Q
     |||||||||| |||||||||| | ||||||||||||||||||    
T  35142529 tttttattttt-tgctttttctggaaaaatggtaatacaaaaa 35142570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 243 - 386
Target Start/End: Original strand, 24288938 - 24289082
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggcttttt---gctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgact 338  Q
    ||||||||||||| |||||| |||||||||||| || ||| |||||||   |||||| | | || ||||||||||| ||| |||||| | ||||||||||    
T  24288938 atcctttcgtcccacccgaggtgaaagtgaacttgtttagtgcttttttttgctttatgtattt-tcatcattaatgaaa-ggtcgtctcgatcccgact 24289035  T
Q  339 ttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    ||| ||||||||| ||||||||||| | ||||||||||||||||||||    
T  24289036 ttgtttttatttt-gtgctttttctggaaaaatggtaatacaaaaaac 24289082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 386
Target Start/End: Complemental strand, 42570886 - 42570745
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    |||||| |||||| ||||||  || |||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||| ||||||||||| | |    
T  42570886 atccttccgtcccacccgaggcgagagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtcttgatcccgacctcg 42570789  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
     ||||||||| ||||||||||| | ||||||||||||||||||||    
T  42570788 tttttatttt-gtgctttttctggaaaaatggtaatacaaaaaac 42570745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 208 - 384
Target Start/End: Complemental strand, 15949448 - 15949270
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaaca---tcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattg 304  Q
    ||||||||||||||||||  ||||| ||||| || |   ||||||||||||  |||||  || |||||| | || ||||||||||||||||| |  |||     
T  15949448 atgtttgtttgttgctttatgttttccaaaaaaaaaaaatcctttcgtcccatccgaggcgagagtgaatttgtttagggctttttgctttatg-tattt 15949350  T
Q  305 tcatcattaataaaaaggtcgt-ttgatcccgactttgcttttatttttgtgc-tttttcttggaaaatggtaatacaaaaa 384  Q
    |||||||||||  ||||||||| ||||||||||| ||| ||||| |||||||| ||||||| | ||||||||||||||||||    
T  15949349 tcatcattaat-gaaaggtcgtcttgatcccgaccttgttttta-ttttgtgcttttttctggaaaaatggtaatacaaaaa 15949270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 384
Target Start/End: Original strand, 20614548 - 20614687
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    |||||| |||||| | ||||  || |||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||| ||||||||||| |||    
T  20614548 atccttccgtcccactcgaggcgagagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtcttgatcccgaccttg 20614645  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaa 384  Q
     ||||||||| ||||||||||| | ||||||||||||||||||    
T  20614646 tttttatttt-gtgctttttctggaaaaatggtaatacaaaaa 20614687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 243 - 386
Target Start/End: Complemental strand, 21856342 - 21856201
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    ||||||||||||| |||  || | ||||||||| || ||||||||| |||| ||   | || ||||||||||| |||||||||| ||| ||||||| ||     
T  21856342 atcctttcgtcccacccatgacggaagtgaacttgtttagggctttatgctgtatctattt-tcatcattaatgaaaaggtcgtcttggtcccgacctt- 21856245  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    |||||||||| ||||||||||| | ||||||||||||||||||||    
T  21856244 cttttatttt-gtgctttttctggaaaaatggtaatacaaaaaac 21856201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 386
Target Start/End: Complemental strand, 26725466 - 26725423
Alignment:
Q  343 ttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    ||||||||| ||||||||||| | ||||||||||||||||||||    
T  26725466 ttttattttagtgctttttctggaaaaatggtaatacaaaaaac 26725423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 386
Target Start/End: Original strand, 25498514 - 25498583
Alignment:
Q  318 aaaggtcgttt-gatcccgactttgcttttatttttgtgctttttcttggaaaa-tggtaatacaaaaaac 386  Q
    ||||||||||| ||||||||| ||| ||||||||| ||||||||||| | |||| ||||||||||||||||    
T  25498514 aaaggtcgttttgatcccgaccttgtttttatttt-gtgctttttctggaaaaaatggtaatacaaaaaac 25498583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 15949201 - 15949172
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  15949201 aaatcatgcattaataaacccgttgaacac 15949172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 16277502 - 16277531
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  16277502 aaatcatgcattaataaacccgttgaacac 16277531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 21856134 - 21856105
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  21856134 aaatcatgcattaataaacccgttgaacac 21856105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 25498632 - 25498661
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  25498632 aaatcatgcattaataaacccgttgaacac 25498661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 30689465 - 30689436
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  30689465 aaatcatgcattaataaacccgttgaacac 30689436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 35142639 - 35142668
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  35142639 aaatcatgcattaataaacccgttgaacac 35142668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 21116838 - 21116978
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttg 341  Q
    ||||||| ||||  ||||||| | ||||||| | ||  |||||||||||||||| | | || ||||||||||| ||| |||||| | ||||||||| |||    
T  21116838 atcctttagtcctacccgagacggaagtgaatttgttcagggctttttgctttatgta-ttctcatcattaatgaaa-ggtcgtctcgatcccgaccttg 21116935  T
Q  342 cttttatttttgtgctttttcttggaaaa-tggtaatacaaaaaa 385  Q
     ||||||||| |||||||||  ||||||| |||||||||||||||    
T  21116936 -ttttatttt-gtgcttttttgtggaaaaatggtaatacaaaaaa 21116978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 493
Target Start/End: Original strand, 24289149 - 24289177
Alignment:
Q  465 aaatcatgcattaataaacccgttgaaca 493  Q
    |||||||||||||||||||||||||||||    
T  24289149 aaatcatgcattaataaacccgttgaaca 24289177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 148; Significance: 7e-78; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 156 - 497
Target Start/End: Original strand, 11315 - 11651
Alignment:
Q  156 agccgtaattggaccgttgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtccc 255  Q
    ||||||||||||  || ||||| |||| ||||||||||||||||||||||||||||||||||||| |||| || ||||||||| ||| || |||| ||||    
T  11315 agccgtaattgggtcgctgttg-cgtttcttccgctactttttgttcaaataatgtttgtttgtttcttttcgcttttcaaaaaaacgtcatttcatccc 11413  T
Q  256 gcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgt 354  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||| ||||| ||||||    
T  11414 gcccgagatgaaagtgaactggtgtagggctttttgctttaag-atttgtcatcattaataaaaaggtcgttttgatcccgactttgttttta-ttttgt 11511  T
Q  355 gctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaa 454  Q
     ||| ||||||||||||||| |||||||||||  ||         |  |  |||||||||||||| ||||||||||||||||||  | ||||||||| ||    
T  11512 tcttcttcttggaaaatggtgatacaaaaaacctaa---aaaaaattctttaatcattctcaaatatctgcataatcataacttgtacttacttgtc-aa 11607  T
Q  455 aatcgataat-aaatcatgcattaataaacccgttgaacacaat 497  Q
    |||| ||||| ||| ||||||||||||||||| |||||||||||    
T  11608 aatcaataatcaaagcatgcattaataaacccattgaacacaat 11651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 147; Significance: 3e-77; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 240 - 495
Target Start/End: Complemental strand, 7258216 - 7257964
Alignment:
Q  240 aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg--tttgatcccgac 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||    
T  7258216 aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttactttaagaaattgtcatcattaataaaaaggtcgtttttgatcccgac 7258117  T
Q  338 tttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataact 437  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||  ||         |  |  |||||||||||||| |||||||||||||||||    
T  7258116 tttgctttta-ttttgtgctttttcttggaaaatggtaatacaaaaaaccaaa---aaatctttctttaatcattctcaaatatctgcataatcataact 7258021  T
Q  438 ttcatttacttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacaca 495  Q
    |  | ||||||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  7258020 tatacttacttgtc-aaaatcaacaataaatcatgcattaataaacccgttgaacaca 7257964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 173 - 496
Target Start/End: Original strand, 21691748 - 21692069
Alignment:
Q  173 tgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa--catcctttcgtcccgcccgagatgaaagt 270  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||| || |||| |||| ||  ||||||||||||| |||| ||||||||||    
T  21691748 tgttgacgttccttccgatactttttgttcaaataatgtttgtctgttgcttttcgcttttaaaaaaaaaacatcctttcgtcctgccctagatgaaagt 21691847  T
Q  271 gaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttggaaa 369  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||| ||||   ||||||||| ||||||||||    
T  21691848 gaactggtgtagggctttttgcttaaag-aattgtcatcattaataaaaaggtcgttttgatcccgactttg-ttttcactttgtgcttcttcttggaaa 21691945  T
Q  370 atggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaat 468  Q
    |||||||||||||||||  ||         |  |  |||||||||||||| ||||||||||||||||||  | ||||||||| |||||| ||||| ||||    
T  21691946 atggtaatacaaaaaaccaaa---aaattcttctttaatcattctcaaatatctgcataatcataacttgtacttacttgtc-aaaatcaataatcaaat 21692041  T
Q  469 catgcattaataaacccgttgaacacaa 496  Q
    ||||||||||||||||| ||||||||||    
T  21692042 catgcattaataaaccctttgaacacaa 21692069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 235 - 495
Target Start/End: Complemental strand, 12391483 - 12391231
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaat-aaaaaggtcg-tttgatc 332  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| |||||||    
T  12391483 aaaaaaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag-aattgtcatcatttataaaaaaggtcgttttgatc 12391385  T
Q  333 ccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatca 432  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||| |  ||         ||||  |||||||| ||||| ||||||||||||    
T  12391384 ccgactttgctttta-ttttgtgctttttcttggaaaatggtaacacaaaaacccaaa------aaataat-taatcattcacaaatatctgcataatca 12391293  T
Q  433 taactttcatttacttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacaca 495  Q
    |||||||  |||||||||| |||||| | |||||||||||||||||||||| |||||||||||    
T  12391292 taacttttgtttacttgtc-aaaatcaacaataaatcatgcattaataaactcgttgaacaca 12391231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 140 - 497
Target Start/End: Original strand, 25529354 - 25529702
Alignment:
Q  140 gacacatggggtggtcagccgtaattggaccgttgttgacgttccttccgctactttt-tgttcaaataatgt--ttgtttgttgctttgcgtttttcaa 236  Q
    ||||||||| ||||  ||||||||||||  || ||||||||||||||||||||||  | ||||||||||||||  |||||||||||||| |   ||||||    
T  25529354 gacacatggagtggatagccgtaattgggtcgctgttgacgttccttccgctactcatctgttcaaataatgtgtttgtttgttgcttttcacgtttcaa 25529453  T
Q  237 aagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccg 335  Q
    || ||  |  |||||||| |||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  25529454 aaaaa--ttatttcgtcctgcccgagatgtaagtgaacttgtgtagggctttttgctttaag-aattgtcatcattaataaaaaggtcgttttgatcccg 25529550  T
Q  336 actttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataa 435  Q
    |||||| ||||| ||||||||||||||| | ||||||||||||||||||||  ||         ||||  ||||||||||| || |||| ||||||| |     
T  25529551 actttg-tttta-ttttgtgctttttctggaaaaatggtaatacaaaaaaccaaa------aaataat--aatcattctcatatatctggataatcaaag 25529640  T
Q  436 ctttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacacaat 497  Q
    |||  | ||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||    
T  25529641 cttgtacttacttgtc-aaaatcaataatcaaatcatgcattaataaacccgttgaacacaat 25529702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 232 - 495
Target Start/End: Original strand, 7790829 - 7791088
Alignment:
Q  232 ttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttga 330  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   ||||||||||| |||||    
T  7790829 ttcaaaaaaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttactttaagaaattgtcatcat---taaaaaggtcgttttga 7790925  T
Q  331 tcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataat 430  Q
    ||||| ||||| ||||   ||||||||| |||||||||||||||||||||||||| |  |         |  |  |||||||||||| | ||||||||||    
T  7790926 tcccgcctttg-ttttcactttgtgcttcttcttggaaaatggtaatacaaaaaaaaccaaaaaaattcttctttaatcattctcaagtatctgcataat 7791024  T
Q  431 cataactttcatttacttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacaca 495  Q
    ||||||||  | ||||||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  7791025 cataacttatacttacttgtc-aaaatcaacaataaatcatgcattaataaacccgttgaacaca 7791088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 235 - 495
Target Start/End: Original strand, 1802134 - 1802387
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcc 333  Q
    |||| ||||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||    
T  1802134 aaaaaaacatcctttcatcccgcccaggatgaaagtgaactagtgtagggctttttgctttaag-atttgtcatcattaataaaaaggtcgttttgatcc 1802232  T
Q  334 cgactttgcttttatttttgtgctttttcttgg-aaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatca 432  Q
    |||||||  ||||  |||||||||||||||||| ||||||||||||||||||||  ||         ||||  |||||||| ||||| ||||||||||||    
T  1802233 cgacttt-attttcattttgtgctttttcttggaaaaatggtaatacaaaaaacccaa-----aaaataat-taatcattcacaaatatctgcataatca 1802325  T
Q  433 taactttcatttacttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacaca 495  Q
    |||||||  |||||||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  1802326 taacttttgtttacttgtc-aaaatcaacaataaatcatgcattaataaacccgttgaacaca 1802387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 175 - 497
Target Start/End: Complemental strand, 20096978 - 20096644
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttc------------aaaagaacatcctttcgtcccgcccgag 262  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||             |||| |||||||||||||||||||||||    
T  20096978 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgcttttcgcttttttttttttttaaaaaaaaaacatcctttcgtcccgcccgag 20096879  T
Q  263 atgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgcttttt 361  Q
    |||||||||| || |||||||||||||| ||||||| | | ||||||||||| |||||||||| |||||||||||||||  ||||| |||||||||||||    
T  20096878 atgaaagtgatcttgtgtagggcttttt-ctttaagtattggtcatcattaacaaaaaggtcgttttgatcccgacttt-atttta-ttttgtgcttttt 20096782  T
Q  362 cttggaaaatggtaatacaaaaaa-cagaagnnnnnnnntaataa--aatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatc 458  Q
    | || ||||||||||||||||||| || ||         ||||||  ||||||| |||||| ||||||||||||||||||  | ||||||||| ||||||    
T  20096781 c-tgaaaaatggtaatacaaaaaaccaaaaaaaaaaaaataataaataatcattttcaaatatctgcataatcataacttgtacttacttgtc-aaaatc 20096684  T
Q  459 gataat-aaatcatgcattaataaacccgttgaacacaat 497  Q
     ||||| |||||||||||| ||||||| ||||||||||||    
T  20096683 aataatcaaatcatgcattgataaacctgttgaacacaat 20096644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 175 - 493
Target Start/End: Original strand, 36451007 - 36451331
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa-----------catcctttcgtcccgcccgaga 263  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||| || ||||||||| ||           ||||||||||||||||| ||||    
T  36451007 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgattttcgcttttcaaaaaaaaaaaaaaaaaacatcctttcgtcccgcctgaga 36451106  T
Q  264 tgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttc 362  Q
    ||||| ||| || |||||||||||||||||||||| | | |||||| ||||||||||||||| ||| |||||||||||  ||||| ||||||||||||||    
T  36451107 tgaaattgatcttgtgtagggctttttgctttaagtattggtcatctttaataaaaaggtcgttttaatcccgacttt-atttta-ttttgtgctttttc 36451204  T
Q  363 ttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgata 462  Q
     || ||||||||||||||||||||  ||         |  |  |||||||| || || |||||||||||||| |||  | ||||||||| |||||| |||    
T  36451205 -tgaaaaatggtaatacaaaaaaccaaa---aagaatttctttaatcattcgcatatatctgcataatcatagcttgtacttacttgtc-aaaatcaata 36451299  T
Q  463 at-aaatcatgcattaataaacccgttgaaca 493  Q
    || |||||||||||||||||||||||||||||    
T  36451300 atcaaatcatgcattaataaacccgttgaaca 36451331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 243 - 497
Target Start/End: Original strand, 37581646 - 37581893
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaat-----aaaaaggtcg-tttgatcccga 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     ||||| |||| || ||||||||    
T  37581646 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag-aattgtcatcattaataaataaaaaaagtcgcttcgatcccga 37581744  T
Q  337 ctttgcttttatttttgtgctttttcttggaaaatggt-aatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataa 435  Q
    ||||||       ||| |||||||||| | |||||||| |||||||||||   ||          |||  ||||||| |||||| |||||||||||||||    
T  37581745 ctttgc------ctttttgctttttctagaaaaatggtaaatacaaaaaaaccaa-----aaaacaat--aatcattttcaaatatctgcataatcataa 37581831  T
Q  436 ctttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacacaat 497  Q
    |||||||||||| ||| |||||| ||||| ||||||||||||||||||| |||||||||||||    
T  37581832 ctttcatttactcgtc-aaaatcaataatcaaatcatgcattaataaactcgttgaacacaat 37581893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 244 - 493
Target Start/End: Original strand, 29897499 - 29897758
Alignment:
Q  244 tcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttg- 341  Q
    |||||||||||||||| ||| |||||||||||  ||||||||||||||||| | | || ||||||||||||||||||||||| ||||||||||||||||     
T  29897499 tcctttcgtcccgcccaagacgaaagtgaacttatgtagggctttttgcttcatg-aactgtcatcattaataaaaaggtcgttttgatcccgactttgt 29897597  T
Q  342 cttttat----ttttgtgctttttcttggaaaatggtaatacaaaaaa-----cagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatca 432  Q
     ||||||    |||||||||| |||||| |||||||||||||||||||     || ||          | |  |||||||||||||| ||||||||||||    
T  29897598 tttttattttattttgtgcttcttcttgaaaaatggtaatacaaaaaaaaaaccaaaaaaaagaaaaaactttaatcattctcaaatatctgcataatca 29897697  T
Q  433 taactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaaca 493  Q
    || |||  | ||||||||| |||||| ||||| |||||||||||||||||||| ||||||||    
T  29897698 tagcttgtacttacttgtc-aaaatcaataatcaaatcatgcattaataaacctgttgaaca 29897758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 208 - 386
Target Start/End: Original strand, 20380764 - 20380938
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||  ||| || ||||||| ||||| ||||||||||||||||| |  | ||||||||||||||||| |  ||| |||    
T  20380764 atgtttgtttgttgctttatgttttttcaaaaaaaatccttttgtcccacccgagatgaaagtgaattcatctagggctttttgctttatg-tattttca 20380862  T
Q  308 tcattaataaaaaggtcgtttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    |||||| |  |||||||| ||||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||    
T  20380863 tcattagt-gaaaggtcgcttgatcccgactttg-tttta-ttttgtgctttttctggaaaaatggtaatacaaaaaac 20380938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 235 - 495
Target Start/End: Complemental strand, 22954942 - 22954683
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggcttttt--gctttaagaaattgtcatcattaataaaaaggtcgttt-gat 331  Q
    |||| ||||||||||||||||  |||||| |||||| ||||  |||||||||||||  |||||||| | | ||||||||||||||||||||||||| |||    
T  22954942 aaaaaaacatcctttcgtcccatccgagacgaaagtaaacttatgtagggctttttttgctttaagta-tggtcatcattaataaaaaggtcgttttgat 22954844  T
Q  332 cccgactttgcttttatttttgtgctttttcttggaaaa-tggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataat 430  Q
    || ||||| | ||||||||| ||||||||| | | |||| ||||||||||||||||  ||         |  |  |||||||||||||| ||||||||||    
T  22954843 cctgactt-gattttatttt-gtgctttttatggaaaaaatggtaatacaaaaaaccaaa--aaaatctttctttaatcattctcaaatatctgcataat 22954748  T
Q  431 cataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacaca 495  Q
    ||||||||  | ||||||||| |||||| ||||| |||||||||||||||||||||||||||||||    
T  22954747 cataacttatacttacttgtc-aaaatcaataatcaaatcatgcattaataaacccgttgaacaca 22954683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 243 - 385
Target Start/End: Complemental strand, 33841697 - 33841558
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgtttgatcccgactttgc 342  Q
    ||||||||||||| ||||||| | || |||||| || ||||||||||||||||  | | || ||||||||||| ||||||||| |||||||||||||||     
T  33841697 atcctttcgtcccacccgagacggaattgaacttgtttagggctttttgcttttcgtattt-tcatcattaatgaaaaggtcgcttgatcccgactttg- 33841600  T
Q  343 ttttatttttgtgctttttcttggaaaatggtaatacaaaaaa 385  Q
    ||||||||| ||||||||||| | |||||||||||||||||||    
T  33841599 ttttatttt-gtgctttttctggaaaaatggtaatacaaaaaa 33841558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 208 - 385
Target Start/End: Complemental strand, 27230434 - 27230261
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||| ||| || ||||||| ||||| ||||||| ||||||||| |  | ||||||||||||||||| |  ||| |||    
T  27230434 atgtttgtttgttgctttatgtttttccaaaaaa-atccttttgtcccccccgagacgaaagtgaattcatctagggctttttgctttatg-tattttca 27230337  T
Q  308 tcattaataaaaaggtcgtttgatcccgactttgcttttatttttgtgctttttcttg-gaaaatggtaatacaaaaaa 385  Q
    ||||||||  |||||||| ||||||||||||||| ||||| ||||||||||||||| |  |||||||||||||||||||    
T  27230336 tcattaat-gaaaggtcgcttgatcccgactttg-tttta-ttttgtgctttttctggaaaaaatggtaatacaaaaaa 27230261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 208 - 387
Target Start/End: Complemental strand, 11810227 - 11810052
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||| ||| || ||||||||||||| ||||||  || |||||| | || ||||| ||||||||||| | | || |||    
T  11810227 atgtttgtttgttgctttatgtttttccaaaaaa-atcctttcgtcccacccgaggcgagagtgaatttgtttagggatttttgctttatgtattt-tca 11810130  T
Q  308 tcattaataaaaaggtcgt-ttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaaca 387  Q
    |||||| | ||| |||||| ||||||||||||||| ||||||||| ||||||||||| | |||||||||||||||||||||    
T  11810129 tcattagtgaaa-ggtcgtcttgatcccgactttg-ttttatttt-gtgctttttctggaaaaatggtaatacaaaaaaca 11810052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 208 - 387
Target Start/End: Complemental strand, 12177381 - 12177206
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||| ||| || ||||||||||||| ||||||  || |||||| | || ||||| ||||||||||| | | || |||    
T  12177381 atgtttgtttgttgctttatgtttttccaaaaaa-atcctttcgtcccacccgaggcgagagtgaatttgtttagggatttttgctttatgtattt-tca 12177284  T
Q  308 tcattaataaaaaggtcgt-ttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaaca 387  Q
    |||||| | ||| |||||| ||||||||||||||| ||||||||| ||||||||||| | |||||||||||||||||||||    
T  12177283 tcattagtgaaa-ggtcgtcttgatcccgactttg-ttttatttt-gtgctttttctggaaaaatggtaatacaaaaaaca 12177206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 195 - 386
Target Start/End: Complemental strand, 26086165 - 26085977
Alignment:
Q  195 ttttgttcaaataat--gtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgc 292  Q
    |||||||||||||||  ||||||||||||||||  ||||||| ||| ||  |||||||||||| ||||||  || |||||| | || ||||| |||||||    
T  26086165 ttttgttcaaataatatgtttgtttgttgctttatgtttttccaaaaaa--tcctttcgtcccacccgaggcgagagtgaatttgtttagggatttttgc 26086068  T
Q  293 tttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    |||| | | || ||||||||| | ||| |||||| ||||||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||    
T  26086067 tttatgtattt-tcatcattagtgaaa-ggtcgtcttgatcccgactttg-ttttatttt-gtgctttttctggaaaaatggtaatacaaaaaac 26085977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 243 - 384
Target Start/End: Complemental strand, 24961551 - 24961412
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    |||||| |||||| ||||||  ||||||||| | || ||||||||||||||||| |  ||| |||||||||||  ||||||||| ||||||||||| |||    
T  24961551 atccttccgtcccacccgaggcgaaagtgaatttgtttagggctttttgctttatg-tattttcatcattaat-gaaaggtcgtcttgatcccgaccttg 24961454  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaa 384  Q
     |||||||||| |||||||||| | ||||||||||||||||||    
T  24961453 tttttattttt-tgctttttctggaaaaatggtaatacaaaaa 24961412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 243 - 385
Target Start/End: Complemental strand, 21864200 - 21864058
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggcttttt-gctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgacttt 340  Q
    ||||||||||||| ||||||| | ||||||| | || ||||||||||| |||||| | | || ||||||||||| |||| |||| |||| | ||||||||    
T  21864200 atcctttcgtcccacccgagacggaagtgaatttgtttagggcttttttgctttatgtattt-tcatcattaattaaaaagtcgctttgtttccgacttt 21864102  T
Q  341 gcttttatttttgtgctttttcttggaaaatggtaatacaaaaaa 385  Q
    | ||||||||| ||||||||||| | |||||||||||||||||||    
T  21864101 gtttttatttt-gtgctttttctggaaaaatggtaatacaaaaaa 21864058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 386
Target Start/End: Original strand, 28847624 - 28847765
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    |||||| |||||| ||||||  || |||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||| ||||||||||| | |    
T  28847624 atccttccgtcccacccgaggcgagagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtcttgatcccgacctcg 28847721  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
     ||||||||| ||||||||||| | ||||||||||||||||||||    
T  28847722 tttttatttt-gtgctttttctggaaaaatggtaatacaaaaaac 28847765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 386
Target Start/End: Original strand, 23639998 - 23640078
Alignment:
Q  305 tcatcattaataaaaaggtcgt-ttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    ||||||||||| |||||||||| ||| ||||||| || |||||||||| ||||||||||| | ||||||||||| ||||||||    
T  23639998 tcatcattaatgaaaaggtcgtcttggtcccgacctt-cttttatttt-gtgctttttctggaaaaatggtaatgcaaaaaac 23640078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 386
Target Start/End: Complemental strand, 23832888 - 23832808
Alignment:
Q  305 tcatcattaataaaaaggtcgt-ttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    ||||||||||| |||||||||| ||| ||||||| || |||||||||| ||||||||||| | ||||||||||| ||||||||    
T  23832888 tcatcattaatgaaaaggtcgtcttggtcccgacctt-cttttatttt-gtgctttttctggaaaaatggtaatgcaaaaaac 23832808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 11809986 - 11809957
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  11809986 aaatcatgcattaataaacccgttgaacac 11809957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 12177139 - 12177110
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  12177139 aaatcatgcattaataaacccgttgaacac 12177110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 20381015 - 20381044
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  20381015 aaatcatgcattaataaacccgttgaacac 20381044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 23640145 - 23640174
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  23640145 aaatcatgcattaataaacccgttgaacac 23640174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 23832741 - 23832712
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  23832741 aaatcatgcattaataaacccgttgaacac 23832712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 24961344 - 24961315
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  24961344 aaatcatgcattaataaacccgttgaacac 24961315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 26085902 - 26085873
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  26085902 aaatcatgcattaataaacccgttgaacac 26085873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 243 - 385
Target Start/End: Complemental strand, 21992603 - 21992463
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    ||||||||||||| ||||||  || |||||| | || ||||| ||||||||||| |  ||| ||||||||| |  ||||||||| | ||||||||| |||    
T  21992603 atcctttcgtcccacccgaggcgagagtgaatttgtttagggatttttgctttatg-tattttcatcattagt-gaaaggtcgtctcgatcccgaccttg 21992506  T
Q  342 cttttatttttgtgctttttcttg-gaaaatggtaatacaaaaaa 385  Q
     ||||| ||||||||||||||| |  |||||||||||||||||||    
T  21992505 -tttta-ttttgtgctttttctggaaaaaatggtaatacaaaaaa 21992463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 145; Significance: 4e-76; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 173 - 496
Target Start/End: Complemental strand, 22162 - 21841
Alignment:
Q  173 tgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa--catcctttcgtcccgcccgagatgaaagt 270  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||| || |||| |||| ||  ||||||||||||| |||| ||||||||||    
T  22162 tgttgacgttccttccgatactttttgttcaaataatgtttgtctgttgcttttcgcttttaaaaaaaaaacatcctttcgtcctgccctagatgaaagt 22063  T
Q  271 gaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttggaaa 369  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||| ||||   ||||||||| ||||||||||    
T  22062 gaactggtgtagggctttttgcttaaag-aattgtcatcattaataaaaaggtcgttttgatcccgactttg-ttttcactttgtgcttcttcttggaaa 21965  T
Q  370 atggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaat 468  Q
    |||||||||||||||||  ||         |  |  |||||||||||||| ||||||||||||||||||  | ||||||||| |||||| ||||| ||||    
T  21964 atggtaatacaaaaaaccaaa---aaattcttctttaatcattctcaaatatctgcataatcataacttgtacttacttgtc-aaaatcaataatcaaat 21869  T
Q  469 catgcattaataaacccgttgaacacaa 496  Q
    ||||||||||||||||| ||||||||||    
T  21868 catgcattaataaaccctttgaacacaa 21841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 2e-75; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 173 - 496
Target Start/End: Original strand, 15623621 - 15623945
Alignment:
Q  173 tgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttc-aaaagaacatcctttcgtcccgcccgagatgaaagtg 271  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| || ||||| |||| ||||||||||||||| |||| |||||||||||    
T  15623621 tgttgacgttccttctgctactttttgttcaaataatgtttgtctgttgcttttcgcttttcaaaaaaaacatcctttcgtcctgccctagatgaaagtg 15623720  T
Q  272 aactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttggaaaa 370  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| ||||   ||||||||| |||||||||||    
T  15623721 aactggtgtagggctttttgcttaaag-aattgtcatcattaataaaaaggtcgttttgatcccgcctttg-ttttcactttgtgcttcttcttggaaaa 15623818  T
Q  371 tggtaatac-aaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaat 468  Q
    ||||||||| |||||||  ||         |  |  |||||||||||| | ||||||||||||||||||  | ||||||||| |||||| ||||| ||||    
T  15623819 tggtaatacaaaaaaaccaaaaaaaaattcttctttaatcattctcaagtatctgcataatcataacttgtacttacttgtc-aaaatcaataatcaaat 15623917  T
Q  469 catgcattaataaacccgttgaacacaa 496  Q
    ||||||||||||||||||||||||||||    
T  15623918 catgcattaataaacccgttgaacacaa 15623945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 230 - 495
Target Start/End: Original strand, 6198412 - 6198670
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-ttt 328  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  6198412 ttttcaaaa-aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttactttaagaaattgtcatcattaataaaaaggtcgtttt 6198510  T
Q  329 gatcccgactttgcttttatttttgtgctttttcttgg-aaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcat 427  Q
    ||||||| |||| |||| | |||||||||||||||||| ||||||||||||||||||||  ||         ||||  |||||||| ||||| |||||||    
T  6198511 gatcccgcctttactttca-ttttgtgctttttcttggaaaaatggtaatacaaaaaacccaa-----aaaataat-taatcattcacaaatatctgcat 6198603  T
Q  428 aatcataactttcatttacttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacaca 495  Q
    ||||||||||||  |||||||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  6198604 aatcataacttttgtttacttgtc-aaaatcaacaataaatcatgcattaataaacccgttgaacaca 6198670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 175 - 493
Target Start/End: Original strand, 70903 - 71217
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaac 274  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||| ||  ||||||||||||||||||||||||||||| |    
T  70903 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgcttttcgcttttcaaaaaaa--tcctttcgtcccgcccgagatgaaagtgatc 71000  T
Q  275 tggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttggaaaatgg 373  Q
    | |||||||||||||||||||||| | | |||||||||||||||||||||| |||||||||||||||  ||||| |||| |||| |||  || |||||||    
T  71001 ttgtgtagggctttttgctttaagtattggtcatcattaataaaaaggtcgttttgatcccgacttt-atttta-ttttatgctcttttctgaaaaatgg 71098  T
Q  374 taatacaaaaaacagaagnnnnnnnntaataa-aatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaatcat 471  Q
    |||||||||||||  ||         |||||| ||||||||||| || |||||||||||||| |||  | ||||||||| |||||| ||||| |||||||    
T  71099 taatacaaaaaacccaa--aaaaaaataataataatcattctcatatatctgcataatcatagcttgtacttacttgtc-aaaatcaataatcaaatcat 71195  T
Q  472 gcattaataaacccgttgaaca 493  Q
    ||||||||||||||||||||||    
T  71196 gcattaataaacccgttgaaca 71217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 175 - 497
Target Start/End: Original strand, 8608944 - 8609279
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa--------catcctttcgtcccgcccgagatga 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||| ||        |||||| |||||||||| |||||||    
T  8608944 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgcttttcgcttttcaaaaaaaaaaaaaaacatcctatcgtcccgcctgagatga 8609043  T
Q  267 aagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttg 365  Q
    |||||| || |||||||||||||||||||||| | | |||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| |    
T  8609044 aagtgatcttgtgtagggctttttgctttaagtattggtcatcattaataaaaaggtcgttttgatcccgactttgctttttattttgtgctttttctgg 8609143  T
Q  366 gaaaatggtaatacaaaaa----acagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgat 461  Q
     ||||||||||||||||||    | | ||         |  |  |||||||||||||| ||||||||||||||||||  ||||||||||| |||||| ||    
T  8609144 aaaaatggtaatacaaaaaaaccaaaaaaaaaaaatctttctttaatcattctcaaatatctgcataatcataacttatatttacttgtc-aaaatcaat 8609242  T
Q  462 aat-aaatcatgcattaataaacccgttgaacacaat 497  Q
    ||| |||||||| ||||||||||||||||||||||||    
T  8609243 aatcaaatcatgtattaataaacccgttgaacacaat 8609279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 175 - 491
Target Start/End: Complemental strand, 30093170 - 30092859
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa--catcctttcgtcccgcccgagatgaaagtga 272  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| || |||| |||| ||  |||||||||||||||||||||||||||||||    
T  30093170 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgcttttcgcttttaaaaaaaaaacatcctttcgtcccgcccgagatgaaagtga 30093071  T
Q  273 actggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttggaaaat 371  Q
     || |||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||  ||||| |||||||||||||| || |||||    
T  30093070 tcttgtgtagggttttttgctttaag-aattgtcatcattaataaaaaggtcgttttgatcccgacttt-atttta-ttttgtgctttttc-tgaaaaat 30092975  T
Q  372 ggtaatacaaaaaacagaagnnnnnnnntaataa-aatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgat-aataaatc 469  Q
    |||||||||||||||  ||         |||||| ||||||| |||||| ||||||||| |||||||   | ||||||||| |||||| || ||||||||    
T  30092974 ggtaatacaaaaaaccaaa-----aaaataataataatcattttcaaatatctgcataaccataactcgtacttacttgtc-aaaatcaataaataaatc 30092881  T
Q  470 atgcattaataaacccgttgaa 491  Q
    ||||||||||||||||||||||    
T  30092880 atgcattaataaacccgttgaa 30092859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 230 - 497
Target Start/End: Original strand, 8808534 - 8808798
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaat-aaaaaggtcg-tt 327  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| ||    
T  8808534 ttttcaaaaaaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag-aattgtcatcatttataaaaaaggtcgttt 8808632  T
Q  328 tgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcat 427  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  ||         |  |  |||||||||||||| |||||||    
T  8808633 tgatcccgactttgctttta-ttttgtgctttttcttggaaaatggtaacacaaaaaaccaaa---aaatctttctttaatcattctcaaatatctgcat 8808728  T
Q  428 aatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacacaat 497  Q
    |||||||||||  | ||||||||| |||||| ||||| ||||||||||||||||||||||||||| |||||    
T  8808729 aatcataacttatacttacttgtc-aaaatcaataatcaaatcatgcattaataaacccgttgaaaacaat 8808798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 186 - 497
Target Start/End: Original strand, 11184135 - 11184444
Alignment:
Q  186 tccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaaca----tcctttcgtcccgcccgagatgaaagtgaactggtgta 281  Q
    ||||||||||||||||||| |||||||||||||||||||| || |||  |||| || |    |||||||||||||||||||| |||||||| || |||||    
T  11184135 tccgctactttttgttcaattaatgtttgtttgttgcttttcgctttaaaaaaaaaaaaaaatcctttcgtcccgcccgagaggaaagtgatcttgtgta 11184234  T
Q  282 gggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaataca 380  Q
     |||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||| |||||  |||||||||||||||| ||||||||||||||    
T  11184235 tggctttttgctttaagtatttgtcatcattaataaaaaggtcgttttgatcccgactttgttttta-gtttgtgctttttcttgaaaaatggtaataca 11184333  T
Q  381 aaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaat 479  Q
    ||||||  ||         ||||  ||||||||||| || |||||||||||||| |||  | ||||||||| |||||| ||||| |||||||||||||||    
T  11184334 aaaaacccaa----aaagataat--aatcattctcatatatctgcataatcatagcttgtacttacttgtc-aaaatcaataatcaaatcatgcattaat 11184426  T
Q  480 aaacccgttgaacacaat 497  Q
    ||||||||||||||||||    
T  11184427 aaacccgttgaacacaat 11184444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 175 - 497
Target Start/End: Original strand, 33568619 - 33568938
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa---catcctttcgtcccgcccgagatgaaagtg 271  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||| || |||| |||| ||   ||||||||||||||||||||||||||||||    
T  33568619 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgattttcgcttttaaaaaaaaaaacatcctttcgtcccgcccgagatgaaagtg 33568718  T
Q  272 aactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttgcttttatttttgtgctttttcttggaaaa 370  Q
    | || |||||||||||||||||| | | ||||||||||||||||||||| ||||| ||||||||||| ||||||||| |||| |||| |||  || ||||    
T  33568719 atcttgtgtagggctttttgcttcatg-aattgtcatcattaataaaaaagtcgtcttgatcccgaccttgctttta-ttttatgctcttttctgaaaaa 33568816  T
Q  371 tggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaatc 469  Q
    |||||||| |||||||  ||         |  |  |||||||||||||| ||||||||||||||||||| | ||||||||| ||| || ||||| |||||    
T  33568817 tggtaatataaaaaaccaaa-----aaaattctttaatcattctcaaatatctgcataatcataacttttacttacttgtc-aaattcaataatcaaatc 33568910  T
Q  470 atgcattaataaacccgttgaacacaat 497  Q
    ||||||||||||||||||||||||||||    
T  33568911 atgcattaataaacccgttgaacacaat 33568938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 235 - 495
Target Start/End: Original strand, 30017083 - 30017341
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcc 333  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| || |||||    
T  30017083 aaaaaaacatcctttcgtcccgcccgagatgaaagtgaactggcgtagggctttttgctttaag-aattgtcatcattaataaaaaagtcgcttcgatcc 30017181  T
Q  334 cgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcat 433  Q
    |||||||||||||  |||| |||||||||| | ||||||||||||||||||||  ||         |  |  ||||||| |||||| |||||||||||||    
T  30017182 cgactttgctttttattttttgctttttctggaaaaatggtaatacaaaaaacccaaaaaaaaatct--tttaatcattttcaaatatctgcataatcat 30017279  T
Q  434 aactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacaca 495  Q
    ||||||||||||| |||| |||||| ||||| |||||||||||||||||||||||||||||||    
T  30017280 aactttcatttacatgtc-aaaatcaataatcaaatcatgcattaataaacccgttgaacaca 30017341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 235 - 495
Target Start/End: Original strand, 14421576 - 14421836
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggc-tttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatc 332  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||| |||||||||||||||| |||||||    
T  14421576 aaaaaaacatcctttcgtcccgcccgagatgaaagtgaactggtgaagggcttttttgctttaag-aattgtcattattaataaaaaggtcgttttgatc 14421674  T
Q  333 ccgactttgcttttatttttgtgctttttcttgg-aaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatc 431  Q
    ||||||||| ||||  |||||||||||||||||| ||||||||||||||||||||  ||         |  |  |||||||||||||| |||||||||||    
T  14421675 ccgactttg-ttttcattttgtgctttttcttggaaaaatggtaatacaaaaaacccaa-aaaaaaatttctttaatcattctcaaatatctgcataatc 14421772  T
Q  432 ataactttcatttacttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacaca 495  Q
    |||||||  |  ||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  14421773 ataacttgtacatacttgtcaaaaatcaacaataaatcatgcattaataaacccgttgaacaca 14421836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 230 - 497
Target Start/End: Original strand, 21611964 - 21612232
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaat-aaaaaggtcg-tt 327  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| ||    
T  21611964 ttttcaaaa-aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag-aattgtcatcatttataaaaaaggtcgttt 21612061  T
Q  328 tgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcat 427  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||         |  |  |||||||||||||| |||||||    
T  21612062 tgatcccgactttgctttta-ttttgtgctttttcttggaaaatggtaatacaaaaaaccaaa---aaatctttctttaatcattctcaaatatctgcat 21612157  T
Q  428 aatcataactttcatttacttgtcaaaaatcgataat-aaatcatgca-----ttaataaacccgttgaacacaat 497  Q
    |||||||||||  | ||||||||| |||||| ||||| ||||||||||     |||||||||||||||||||||||    
T  21612158 aatcataacttatacttacttgtc-aaaatcaataatcaaatcatgcattaatttaataaacccgttgaacacaat 21612232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 235 - 495
Target Start/End: Complemental strand, 15533382 - 15533129
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcc 333  Q
    |||| ||||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||    
T  15533382 aaaaaaacatcctttcatcccgcccaggatgaaagtgaactagtgtagggctttttgctttaag-atttgtcatcattaataaaaaggtcgttttgatcc 15533284  T
Q  334 cgactttgcttttatttttgtgctttttcttgg-aaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatca 432  Q
    ||||||| |||| | |||||||||||||||||| ||||||||||||||||||||  ||         ||||  |||||||| ||||| ||||||||||||    
T  15533283 cgactttactttca-ttttgtgctttttcttggaaaaatggtaatacaaaaaacccaa-----aaaataat-taatcattcacaaatatctgcataatca 15533191  T
Q  433 taactttcatttacttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacaca 495  Q
    |||||||  |||||||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  15533190 taacttttgtttacttgtc-aaaatcaacaataaatcatgcattaataaacccgttgaacaca 15533129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 140 - 495
Target Start/End: Complemental strand, 12476450 - 12476092
Alignment:
Q  140 gacacatggggtggtcagccgtaattggaccgttgttgacgttccttccgctactttt-tgttcaaataatgt--ttgtttgttgctttgcgtttttcaa 236  Q
    ||||||||| ||||  ||||||||||||  ||||||||| |||||||||||||||  | ||||||||||||||  |||||||||||||   | |||||||    
T  12476450 gacacatggagtggatagccgtaattgggtcgttgttgatgttccttccgctactcatctgttcaaataatgtgtttgtttgttgcttgctgcttttcaa 12476351  T
Q  237 aagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccg 335  Q
    ||  | || | ||||||| |||||| | ||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||    
T  12476350 aaataaatacattcgtcctgcccgatacgaaagtgaacttgtgtagggctttttgctttaag-aattgtaatcattaataaaaaggtcgttttgatcccg 12476252  T
Q  336 actttgcttttatttttgtgctttttcttgg--aaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcat 433  Q
    |||||| ||||| || |||||||||||||||  ||||||||||||||||||| |  |         |  |  |||||||||||||| |||||||||||||    
T  12476251 actttgttttta-ttctgtgctttttcttgggaaaaatggtaatacaaaaaaaacca-aaaaactcttctttaatcattctcaaatatctgcataatcat 12476154  T
Q  434 aactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacaca 495  Q
    ||||| || ||||||||| |||||| ||||| | |||||||||| ||||||||||||||||||    
T  12476153 aacttgcacttacttgtc-aaaatcaataatcatatcatgcattgataaacccgttgaacaca 12476092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 175 - 493
Target Start/End: Complemental strand, 23285452 - 23285134
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaag--------aacatcctttcgtcccgcccgagatga 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||         || ||||||||||||||||||||||||    
T  23285452 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgcttttcgcttttcaaaaagaaattaaaaaatcctttcgtcccgcccgagatga 23285353  T
Q  267 aagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttg 365  Q
    |||||| || |||||||||||||||||||||| | | |||||||||||||||||||| | |||||||||||||||  ||||| |||||||||||||| ||    
T  23285352 aagtgatcttgtgtagggctttttgctttaagtattggtcatcattaataaaaaggttgttttgatcccgacttt-atttta-ttttgtgctttttc-tg 23285256  T
Q  366 gaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcat-aatcataactttcatttacttgtcaaaaatcgataat 464  Q
     ||||||||||||||||||||  ||         ||||  ||||||||||| || ||||||| ||||||| |||  | ||||||||| |||||| |||||    
T  23285255 aaaaatggtaatacaaaaaaccaaa-----aaaataat--aatcattctcatatatctgcataaatcatagcttgtacttacttgtc-aaaatcaataat 23285164  T
Q  465 -aaatcatgcattaataaacccgttgaaca 493  Q
     ||||||| |||||||||||||||||||||    
T  23285163 caaatcatccattaataaacccgttgaaca 23285134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 175 - 493
Target Start/End: Complemental strand, 13109110 - 13108795
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgttttt--caaaagaacatcctttcgtcccgcccgagatgaaagtga 272  Q
    |||||||||||||||||||||||||||||| |||| |||| |||||| ||| |  ||||   |||| ||||||||||||||||||||||||||||| |||    
T  13109110 ttgacgttccttccgctactttttgttcaattaatttttgcttgttgattttcacttttaagaaaaaaacatcctttcgtcccgcccgagatgaaattga 13109011  T
Q  273 actggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttggaaaat 371  Q
     || |||||||||||||||||||||| | | |||||| ||||||||||||||| |||||||||||||||  ||||| |||||||||||||| || |||||    
T  13109010 tcttgtgtagggctttttgctttaagtattggtcatctttaataaaaaggtcgttttgatcccgacttt-atttta-ttttgtgctttttc-tgaaaaat 13108914  T
Q  372 ggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaatca 470  Q
    |||||||||||||||  ||         |  |  ||||||||||| || |||||||||||||| |||  | ||||||||| |||||| ||||| ||||||    
T  13108913 ggtaatacaaaaaaccaaa---aagaatttctttaatcattctcatatatctgcataatcatagcttgtacttacttgtc-aaaatcaataatcaaatca 13108818  T
Q  471 tgcattaataaacccgttgaaca 493  Q
    |||||||||||||||||||||||    
T  13108817 tgcattaataaacccgttgaaca 13108795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 235 - 495
Target Start/End: Original strand, 3680514 - 3680785
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcc 333  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| || |||||    
T  3680514 aaaaaaacatcctttcgtcccgcccgagatgaaagtgaactggcgtagggctttttgctttaag-aattgtcatcattaataaaaaagtcgcttcgatcc 3680612  T
Q  334 cgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaa---cagaagnnnnnnnntaataaaa--------tcattctcaaatgtc 422  Q
    |||||||||||||  |||| |||||||||| | |||||||||||||||||||   || ||          || ||||        ||||| |||||| ||    
T  3680613 cgactttgctttttattttttgctttttctggaaaaatggtaatacaaaaaaacccaaaaaaaaaaaaaaaaaaaaatcttttaatcattttcaaatatc 3680712  T
Q  423 tgcataatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacaca 495  Q
    |||||||||||||||||||||||| |||| |||||| ||||| |||||||||||||||||||||||||||||||    
T  3680713 tgcataatcataactttcatttacatgtc-aaaatcaataatcaaatcatgcattaataaacccgttgaacaca 3680785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 229 - 495
Target Start/End: Original strand, 8620449 - 8620708
Alignment:
Q  229 tttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tt 327  Q
    ||||| |||| ||||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||| ||    
T  8620449 tttttaaaaaaaacatcctttcatcccgcccaggatgaaagtgaactagtgtagggctttttgctttaag-atttgtcatcattaataaaaaggtcgttt 8620547  T
Q  328 tgatcccgactttgcttttatttttgtgctttttctt-ggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgca 426  Q
    | ||||||||||| |||| | |||||||||||||||| | |||||||||||| |||||||  ||         ||||  |||||||| ||||| ||||||    
T  8620548 taatcccgactttactttca-ttttgtgctttttcttagaaaaatggtaatataaaaaacccaa-----aaaataat-taatcattcacaaatatctgca 8620640  T
Q  427 taatcataactttcatttacttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacaca 495  Q
    |||||||||||||  |||||||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  8620641 taatcataacttttgtttacttgtc-aaaatcaacaataaatcatgcattaataaacccgttgaacaca 8620708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 140 - 340
Target Start/End: Complemental strand, 14884723 - 14884513
Alignment:
Q  140 gacacatggggtggtcagccgtaattggaccgttgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaag 239  Q
    ||||||||| ||| | ||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| || |||| ||||     
T  14884723 gacacatggagtgtttagccgtaattggatcgttgttgacgttccttccactaccttttgttcaaataatgtttgtttgttgcttttcgcttttaaaaaa 14884624  T
Q  240 aa----------catcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-ttt 328  Q
    ||          |||||||||  || ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||| |||    
T  14884623 aaaaaaaaaaaacatcctttcagcctgcccgagatgaaagtgaacaggtgtagggctttttgctttaag-aattgtcatcattaataaaaaagtcgtttt 14884525  T
Q  329 gatcccgacttt 340  Q
    ||||||||||||    
T  14884524 gatcccgacttt 14884513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 235 - 495
Target Start/End: Complemental strand, 46396754 - 46396501
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcc 333  Q
    |||| ||||||||||| |||||||   || ||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||    
T  46396754 aaaaaaacatcctttcatcccgcctaggacgaaagtgaactagtgtagggctttttgctttaag-atttgtcatcattaataaaaaggtcgttttgatcc 46396656  T
Q  334 cgactttgcttttatttttgtgctttttcttgg--aaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatc 431  Q
    |||||||  ||||  ||||||||||||||||||  ||||||||||||||||||||  ||         ||||  |||||||| ||||| |||||||||||    
T  46396655 cgacttt-attttcattttgtgctttttcttggaaaaaatggtaatacaaaaaacccaa------aaataat-taatcattcacaaatatctgcataatc 46396564  T
Q  432 ataactttcatttacttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacaca 495  Q
    ||||||||  |||||||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  46396563 ataacttttgtttacttgtc-aaaatcaacaataaatcatgcattaataaacccgttgaacaca 46396501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 175 - 493
Target Start/End: Original strand, 12557791 - 12558115
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa--------catcctttcgtcccgcccgagatga 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |  ||||||||| ||        || ||||| ||||||||||||||||    
T  12557791 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgcttttcacttttcaaaaaaaaaaaaaaacacccttttgtcccgcccgagatga 12557890  T
Q  267 aagtgaactggtgtagggctttttgctttaagaaattgtcatcattaat-aaaaaggtcgt-ttgatcccgactttgcttttatttttgtgctttttctt 364  Q
    |||||||||  ||||||||| ||||||| | | |||||| ||||||||| ||||| ||||| ||||||| ||| |||||||  ||||| |||| |||  |    
T  12557891 aagtgaacttatgtagggctctttgcttcatg-aattgttatcattaataaaaaaagtcgtcttgatccggaccttgcttt--tttttatgctcttttct 12557987  T
Q  365 ggaaaatggtaatacaaaaaacagaagnnnnnnnntaataa-aatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataa 463  Q
    | ||||||||||||||||||||  ||         |||||| ||||||||||| || |||||||||||||| |||  | ||||||||| |||||| ||||    
T  12557988 gaaaaatggtaatacaaaaaacccaa--aaaaaaataataataatcattctcatatatctgcataatcatagcttgtacttacttgtc-aaaatcaataa 12558084  T
Q  464 t-aaatcatgcattaataaacccgttgaaca 493  Q
    | |||||||||||||||||||||||||||||    
T  12558085 tcaaatcatgcattaataaacccgttgaaca 12558115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 243 - 387
Target Start/End: Complemental strand, 15681422 - 15681281
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgtttgatcccgactttgc 342  Q
    ||||||||||||| ||||||| | ||||||||| || ||||||| | ||||||  | | || ||||||||||| ||||||||| |||||||||||||||     
T  15681422 atcctttcgtcccacccgagacggaagtgaacttgtttagggctctatgcttttcgtattt-tcatcattaatgaaaaggtcgcttgatcccgactttg- 15681325  T
Q  343 ttttatttttgtgctttttcttggaaaatggtaatacaaaaaaca 387  Q
    ||||||||| ||||||||||| | |||||||||||||||||||||    
T  15681324 ttttatttt-gtgctttttctggaaaaatggtaatacaaaaaaca 15681281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 406 - 497
Target Start/End: Original strand, 3408000 - 3408091
Alignment:
Q  406 aatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacacaat 497  Q
    |||||||||||||| ||||||||||||||||||  | ||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||    
T  3408000 aatcattctcaaatatctgcataatcataacttatacttacttgtc-aaaatcaataatcaaatcatgcattaataaacccgttgaacacaat 3408091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 25267263 - 25267437
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||| ||| || ||||||||||||| ||||||  || |||||| | || ||||| ||||||||||| |  ||| |||    
T  25267263 atgtttgtttgttgctttatgtttttccaaaaaaaatcctttcgtcccacccgaggcgagagtgaatttgtttagggatttttgctttatg-tattttca 25267361  T
Q  308 tcattaataaaaaggtcgtttgatcccgactttgcttttatttttgtgctttttcttg-gaaaatggtaatacaaaaaa 385  Q
    |||||| |  |||||||| ||||||||||||||| ||||| ||||||||||||||| |  |||||||||||||||||||    
T  25267362 tcattagt-gaaaggtcgcttgatcccgactttg-tttta-ttttgtgctttttctggaaaaaatggtaatacaaaaaa 25267437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 385
Target Start/End: Complemental strand, 10719043 - 10718903
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    ||||||||||||| ||||||| | ||||||||| || |||||||||||||| ||   | || ||||||||||| |||||||||| ||| ||||||| ||     
T  10719043 atcctttcgtcccacccgagacggaagtgaacttgtttagggctttttgctgtatctattt-tcatcattaatgaaaaggtcgtcttggtcccgacctt- 10718946  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaaa 385  Q
    |||||||||| ||||||||||| | |||||||||||||||||||    
T  10718945 cttttatttt-gtgctttttctggaaaaatggtaatacaaaaaa 10718903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 384
Target Start/End: Original strand, 41002108 - 41002247
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    |||||| |||||| ||||||   |||||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||| ||||||||||| |||    
T  41002108 atccttccgtcccacccgaggcaaaagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtcttgatcccgaccttg 41002205  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaa 384  Q
     |||||||||| |||||||||| | ||||||||||||||||||    
T  41002206 tttttattttt-tgctttttctggaaaaatggtaatacaaaaa 41002247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 384
Target Start/End: Original strand, 41010890 - 41011029
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    |||||| |||||| ||||||   |||||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||| ||||||||||| |||    
T  41010890 atccttccgtcccacccgaggcaaaagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtcttgatcccgaccttg 41010987  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaaaa 384  Q
     |||||||||| |||||||||| | ||||||||||||||||||    
T  41010988 tttttattttt-tgctttttctggaaaaatggtaatacaaaaa 41011029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 230 - 386
Target Start/End: Complemental strand, 26383535 - 26383380
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtc-gttt 328  Q
    ||||||||||||  |||||| ||||||||| ||| |||||||||||  |||||| ||||||| ||| |   ||| ||||||||||||||||||||  |||    
T  26383535 ttttcaaaagaa--tcctttagtcccgcccaagacgaaagtgaacttatgtaggactttttg-tttcatgtattttcatcattaataaaaaggtcaattt 26383439  T
Q  329 gatcccgactttgcttttat-ttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    |||||   ||||  |||| | ||||||||||||||| | ||||||||||||||||||||    
T  26383438 gatcctagctttatttttttattttgtgctttttctggaaaaatggtaatacaaaaaac 26383380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 243 - 363
Target Start/End: Original strand, 27884274 - 27884391
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    ||||||||||||| ||||||| ||||||||||| || ||||| ||||||||||| |  ||| ||||||||| |  ||||||||| | |||||||||||||    
T  27884274 atcctttcgtcccacccgagacgaaagtgaacttgtttaggg-tttttgctttatg-tattttcatcattagttgaaaggtcgtctcgatcccgactttg 27884371  T
Q  342 cttttatttttgtgctttttct 363  Q
     |||||  ||||||||||||||    
T  27884372 ttttta--tttgtgctttttct 27884391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 386
Target Start/End: Complemental strand, 3241752 - 3241615
Alignment:
Q  247 tttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttgcttt 345  Q
    |||| |||| || |||| ||||| | ||| || |||||||||||||| || | | || |||||| |||||||||| |||||| ||||||||||||| |||    
T  3241752 tttcttcccacctgagacgaaaggggacttgtttagggctttttgctatacgtattt-tcatcactaataaaaag-tcgttttgatcccgactttgtttt 3241655  T
Q  346 tatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    |||||| ||||||||||| | |||| || ||||||||||||    
T  3241654 tatttt-gtgctttttctggaaaaacggcaatacaaaaaac 3241615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 243 - 382
Target Start/End: Complemental strand, 14395284 - 14395146
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttg 341  Q
    ||||||||||| ||||| ||| ||||||||  |  |  |||||||||||||| | | | ||  |||||||||||||||  |||||| ||||| |||||||    
T  14395284 atcctttcgtctcgcccaagacgaaagtgagtttataaagggctttttgcttcatgtattttccatcattaataaaaaattcgttttgatcctgactttg 14395185  T
Q  342 cttttatttttgtgctttttcttggaaaatggtaatacaaa 382  Q
    ||||   |||||||||||||||   ||||||||||||||||    
T  14395184 cttta--ttttgtgctttttctgaaaaaatggtaatacaaa 14395146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 387
Target Start/End: Complemental strand, 14663531 - 14663493
Alignment:
Q  349 ttttgtgctttttcttggaaaatggtaatacaaaaaaca 387  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  14663531 ttttgtgctttttctggaaaaatggtaatacaaaaaaca 14663493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 443 - 497
Target Start/End: Complemental strand, 14884498 - 14884445
Alignment:
Q  443 ttacttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacacaat 497  Q
    ||||||||||||| || |||  ||||||||||||||||||||| |||||||||||    
T  14884498 ttacttgtcaaaa-tcaatatcaaatcatgcattaataaacccattgaacacaat 14884445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 14663425 - 14663396
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  14663425 aaatcatgcattaataaacccgttgaacac 14663396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 15681206 - 15681177
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  15681206 aaatcatgcattaataaacccgttgaacac 15681177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 378
Target Start/End: Original strand, 17929581 - 17929744
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||| ||||||||||||  || |||||||| |   ||||||||||||   |||||||||||| || | || ||||| ||||||||||| | | || |||    
T  17929581 atgttggtttgttgctttctgtctttcaaaaaa---tcctttcgtcccattcgagatgaaagttaaattgtttaggg-tttttgctttatgtattt-tca 17929675  T
Q  308 tcattaataaaaaggtcgttt-gatcccgactttgcttttatttttgtgctttttcttggaaaatggtaata 378  Q
    |||||||| ||| |||||| | ||||||||||||| ||||||||  ||||||||||| | ||||||||||||    
T  17929676 tcattaatgaaa-ggtcgtctcgatcccgactttg-ttttatttc-gtgctttttctggaaaaatggtaata 17929744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 25267519 - 25267548
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  25267519 aaatcatgcattaataaacccgttgaacac 25267548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 41002316 - 41002345
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  41002316 aaatcatgcattaataaacccgttgaacac 41002345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 41011098 - 41011127
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  41011098 aaatcatgcattaataaacccgttgaacac 41011127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 5952132 - 5952037
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcatt--aataaaaaggtcgttt 328  Q
    |||| |||||||||||| ||||||| |  ||||||||| ||  | |||||||||||| || |||||||| |||||| |  |||||||| |||||||    
T  5952132 aaaaaaacatcctttcgccccgccccaagtgaaagtgagcttatctagggctttttgtttcaagaaattatcatcaataaaataaaaacgtcgttt 5952037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 136; Significance: 1e-70; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 173 - 495
Target Start/End: Complemental strand, 30987 - 30668
Alignment:
Q  173 tgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtga 272  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||| ||||||| |||||||||    
T  30987 tgttgacgttccgtccgctactttttgttcaaataatgtttgtctgttgcttttcgcttttcaaaa-aacatcctttcgtcctgcccgaggtgaaagtga 30889  T
Q  273 actggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttgg--aaa 369  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| ||||  ||||||||||||   |||  |||    
T  30888 actggtgtagagctttttgctttaag-aattgtcatcattaataaaaaagtcgttttgatcccgactttg-ttttcattttgtgcttttctctggaaaaa 30791  T
Q  370 atggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaat 468  Q
    ||||||||| |||||||  ||         |  | ||||||||||||||| |||||||||| |||||||  | ||||||||| |||||| ||||| ||||    
T  30790 atggtaataaaaaaaaccaaa---aaaaattctttaaatcattctcaaatatctgcataattataacttgtacttacttgtc-aaaatcaataatcaaat 30695  T
Q  469 catgcattaataaacccgttgaacaca 495  Q
    |||||||||||||||||||||||||||    
T  30694 catgcattaataaacccgttgaacaca 30668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 130; Significance: 4e-67; HSPs: 2)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 158 - 386
Target Start/End: Complemental strand, 969 - 746
Alignment:
Q  158 ccgtaattggaccgttgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgc 257  Q
    ||||||||||  |||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||     |   |||| |||||||||||||||| |    
T  969 ccgtaattgggtcgttgttgacgttcattcggctactttttgttcaaatgatgtttgtttgttgcttt-----taaaaaaaaaacatcctttcgtcccac 875  T
Q  258 ccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgc 356  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||  ||||||||    
T  874 ccgagatgaaagtgaactggtgtcgggctttttgctttaag-aattgtcatcattaataaaaaggtcgttttgatcccgactttgttttttattttgtgc 776  T
Q  357 tttttcttggaaaatggtaatacaaaaaac 386  Q
    |  |||||||||||||||||||||||||||    
T  775 tccttcttggaaaatggtaatacaaaaaac 746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 497
Target Start/End: Complemental strand, 729 - 642
Alignment:
Q  406 aatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacacaat 497  Q
    |||| ||||||||| ||||||||||||||||||     |||||||||||| || ||||| ||| ||||||||||||||||| || ||||||||    
T  729 aatcgttctcaaatatctgcataatcataacttg----tacttgtcaaaa-tcaataatcaaagcatgcattaataaacccattaaacacaat 642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 230 - 493
Target Start/End: Original strand, 14968 - 15232
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-ttt 328  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||    
T  14968 ttttcaaaaaaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag-aattgtcatcattaataaaaaggttgtttt 15066  T
Q  329 gatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaaca-gaagnnnnnnnntaataaaatcattctcaaatgtctgcat 427  Q
    |||||| |||||| ||||  ||||||||||||||| | ||||||||||||||||||| |  ||         |     |||||||||||||| |||||||    
T  15067 gatcccaactttgttttttattttgtgctttttctggaaaaatggtaatacaaaaaaaaccaaaaaaaatctttccttaatcattctcaaatatctgcat 15166  T
Q  428 aatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaaca 493  Q
    |||||||||||  | ||||||||| |||||| ||||| |||||||||||||||||||||||||||||    
T  15167 aatcataacttatacttacttgtc-aaaatcaataatcaaatcatgcattaataaacccgttgaaca 15232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0435 (Bit Score: 118; Significance: 5e-60; HSPs: 1)
Name: scaffold0435
Description:

Target: scaffold0435; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 230 - 495
Target Start/End: Complemental strand, 11950 - 11692
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaa-aggtcg-tt 327  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| ||    
T  11950 ttttcaaaa-aacatcctttcgtcccgcccgagatgatagtgaactggtgtagggctttttgctttaag-aattgtcatcattaataaaagtggtcgttt 11853  T
Q  328 tgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaa-cagaagnnnnnnnntaataaaatcattctcaaatgtctgca 426  Q
    |||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||| || |||         |||  ||||||| |||||| ||||||    
T  11852 tgatcccgactttg-tcttcattttgtgctttttcttggaaaatggtaatacaaaaaaccaaaagaa-------aatttaatcattgtcaaatatctgca 11761  T
Q  427 taatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacaca 495  Q
    ||||||||||||  ||||||||||| ||| || ||||| |||||||||||||||||||||||||||||||    
T  11760 taatcataacttgtatttacttgtc-aaagtcaataatcaaatcatgcattaataaacccgttgaacaca 11692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 110; Significance: 3e-55; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 175 - 497
Target Start/End: Complemental strand, 3665 - 3340
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa------catcctttcgtcccgcccgagatgaaa 268  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| || |||| |||| ||      |||||||||||| ||||||||||||||    
T  3665 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgcttttcgcttttaaaaaaaaaaaaaacatcctttcgtctcgcccgagatgaaa 3566  T
Q  269 gtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttgga 367  Q
    |||| || |||||||||||||||||||||| | | |||||||||||||||||||||| ||||||||| |||||  ||||| |||||||||||||| || |    
T  3565 gtgatcttgtgtagggctttttgctttaagtattggtcatcattaataaaaaggtcgttttgatcccaacttt-atttta-ttttgtgctttttc-tgaa 3469  T
Q  368 aaatggtaatacaaaaaacagaagnnnnnnnntaa--taaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat- 464  Q
    ||||||||||||||||| |  ||          ||  |  ||||||||||| || | ||| |||||||||||    | ||||||||||||||| |||||     
T  3468 aaatggtaatacaaaaagccaaaaaaaaaaaaaaatctttaatcattctcatatatttgcgtaatcataact----tgtacttgtcaaaaatcaataatc 3373  T
Q  465 aaatcatgcattaataaacccgttgaacacaat 497  Q
    |||||||||||||||||||||||||||||||||    
T  3372 aaatcatgcattaataaacccgttgaacacaat 3340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0441 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0441
Description:

Target: scaffold0441; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 243 - 497
Target Start/End: Original strand, 7211 - 7466
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttg 341  Q
    ||||||||||||||||| ||| |||||||||||  ||||||||||||||||||||| | | |||||| |||||||||||||||||| |||||||||||||    
T  7211 atcctttcgtcccgcccaagacgaaagtgaacttatgtagggctttttgctttaagta-tcgtcatcgttaataaaaaggtcgttttgatcccgactttg 7309  T
Q  342 cttttatttttgtgcttttt---cttggaaaa-tggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataact 437  Q
     ||||  ||||||| |||||   ||||||||| ||||||||||||||||  ||         |  |  |||||||||||||| ||  |||||||||||||    
T  7310 tttttcattttgtgtttttttttcttggaaaaatggtaatacaaaaaaccaaa---aaaaaattctttaatcattctcaaatatccacataatcataact 7406  T
Q  438 ttcatttacttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacacaat 497  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  7407 ttcatttacttgtcaaaaatcaataataaatcatgcattaataagcccgttgaacacaat 7466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 195 - 493
Target Start/End: Original strand, 18399 - 18693
Alignment:
Q  195 ttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa--catcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgc 292  Q
    |||||||||| |||||||||||||||||||| || |||| |||| ||  ||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  18399 ttttgttcaattaatgtttgtttgttgcttttcgcttttaaaaaaaaaacatcctttcgtcccgcccgagatgaaagtgatcttgtgtagggctttttgc 18498  T
Q  293 tttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaag 391  Q
    ||| || | | |||||||||||||||||||||| |||||| ||||||||  ||||| |||||||||||||| || ||||||||||||||||||||  ||     
T  18499 tttgagtattggtcatcattaataaaaaggtcgttttgattccgacttt-atttta-ttttgtgctttttc-tgaaaaatggtaatacaaaaaaccaaa- 18594  T
Q  392 nnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttga 490  Q
            |  |  ||||||||||| || | ||||||||||||||||  | ||||||||| |||||| ||||| ||||||||||||||||||| ||||||    
T  18595 ---aaaatttctttaatcattctcatatatgtgcataatcataacttgtacttacttgtc-aaaatcaataatcaaatcatgcattaataaactcgttga 18690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 100; Significance: 3e-49; HSPs: 3)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 145 - 284
Target Start/End: Original strand, 17658 - 17796
Alignment:
Q  145 atggggtggtcagccgtaattggaccgttgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacat 244  Q
    |||| ||||| ||||||||||||  || ||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||    
T  17658 atggagtggttagccgtaattgggtcgctgttgacattccttccgctactttttgttcaaataatgtttgtttgttgcttttcgcttttcaaaa-aacat 17756  T
Q  245 cctttcgtcccgcccgagatgaaagtgaactggtgtaggg 284  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17757 cctttcgtcccgcccgagatgaaagtgaactggtgtaggg 17796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 406 - 495
Target Start/End: Original strand, 17871 - 17960
Alignment:
Q  406 aatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacaca 495  Q
    |||||||||||||| ||| ||||||||||||||  | ||||||||| |||||| ||||| |||||||||||| ||||||||||||||||||    
T  17871 aatcattctcaaatatctacataatcataacttgtacttacttgtc-aaaatcaataatcaaatcatgcattgataaacccgttgaacaca 17960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 17796 - 17854
Alignment:
Q  329 gatcccgactttgcttttatttttgtgctttttcttgg--aaaatggtaatacaaaaaac 386  Q
    ||||||||||||| ||||||||| ||||||||||||||  ||||||||||||||||||||    
T  17796 gatcccgactttgtttttatttt-gtgctttttcttgggaaaaatggtaatacaaaaaac 17854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1197 (Bit Score: 98; Significance: 5e-48; HSPs: 1)
Name: scaffold1197
Description:

Target: scaffold1197; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 230 - 495
Target Start/End: Original strand, 32 - 293
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-ttt 328  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |  ||||||||||||||||||||||||| |||    
T  32 ttttcaaaaaaacatcatttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgcttcatg-cattgtcatcattaataaaaaggtcgtttt 130  T
Q  329 gatcccgactttgcttttatttttgtgctttttcttg--gaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgca 426  Q
    ||||||||||||| ||||  |||||||| ||||||||   ||||||||||||||||||||  ||         |  |  |||||||||||||| ||||||    
T  131 gatcccgactttg-ttttcattttgtgc-ttttcttgaaaaaaatggtaatacaaaaaaccaaa---aaaatcttctttaatcattctcaaatatctgca 225  T
Q  427 taatcataactttcatttacttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacaca 495  Q
    ||||||||||||  | |||||| || |||||| | ||||||||||||||||||||||||||||| ||||    
T  226 taatcataacttgtacttacttttc-aaaatcaacaataaatcatgcattaataaacccgttgaccaca 293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 91; Significance: 7e-44; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 230 - 497
Target Start/End: Original strand, 743 - 1005
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-ttt 328  Q
    ||||||||| || ||||||||||||||| | ||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||| |||    
T  743 ttttcaaaaaaa-atcctttcgtcccgcacaagatgaaagtgaactggtgtagggc-ttttgctttaa-agattgtcatcattaataaaaaggtcgtttt 839  T
Q  329 gatcccgactttgcttttatttttgtgctttttcttggaaaatggt-aatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcat 427  Q
    |||||| | |||| ||||  |||||||||||||||||||||||||| ||||||||||||  ||         |  |  |||||||||||||| |||||||    
T  840 gatcccaattttg-ttttcattttgtgctttttcttggaaaatggtaaatacaaaaaaccaaa---aaatatttctttaatcattctcaaatatctgcat 935  T
Q  428 aatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacacaat 497  Q
    |||||||||||  | ||||||||| |||||| ||||| ||||||||||||||||| ||| |||||||||||    
T  936 aatcataacttgtacttacttgtc-aaaatcaataatcaaatcatgcattaataagcccattgaacacaat 1005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 406 - 495
Target Start/End: Complemental strand, 183298 - 183209
Alignment:
Q  406 aatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacaca 495  Q
    ||||||| |||||| ||||||||||||||||||  |  |||||||||||| || ||||| ||||||||||||||||||| |||||||||||    
T  183298 aatcattttcaaatatctgcataatcataacttatacatacttgtcaaaa-tcaataatcaaatcatgcattaataaactcgttgaacaca 183209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 183460 - 183409
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctt 294  Q
    ||||||||||||||||| ||| |||||||||||  | |||||||||||||||    
T  183460 atcctttcgtcccgcccaagacgaaagtgaacttatttagggctttttgctt 183409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 230 - 493
Target Start/End: Original strand, 32085 - 32339
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-ttt 328  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||||| ||||||||||||| || |||    
T  32085 ttttcaaaa-aacatcctttcgtcccgcccgagatgaaagtgaactggtgaagggctttttgcttttag-cattgtcataattaataaaaaggccgtttt 32182  T
Q  329 gatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcata 428  Q
    ||||||||||||  ||||| ||||||||||||||  | ||||||||||||||||||||  ||         |  |  ||||||||||| || ||||||||    
T  32183 gatcccgacttt-atttta-ttttgtgctttttcaggaaaaatggtaatacaaaaaaccaaa------aatttctttaatcattctcatatatctgcata 32274  T
Q  429 atcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaaca 493  Q
    ||||||||||  | ||||||||| |||||| ||||| ||| |||||||||||||||||||||||||    
T  32275 atcataacttgtacttacttgtc-aaaatcaataatcaaagcatgcattaataaacccgttgaaca 32339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 86; Significance: 7e-41; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 280 - 495
Target Start/End: Complemental strand, 16828 - 16618
Alignment:
Q  280 tagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttgcttttatttttgtgctttttcttggaaaatggtaata 378  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||| |||||||||| ||||| |||||||||||||||||||    
T  16828 tagggctttttgctttaagaattt-tcatcattaataaaaaggtcgttttgatcccgactttgtttttattttt-tgcttcttcttggaaaatggtaata 16731  T
Q  379 caaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgat-aataaatcatgcatta 477  Q
    ||||||||  ||         |  |  |||||||||||||| ||||||| ||||||||||  | ||||||||| |||||| || ||||||||||||||||    
T  16730 caaaaaaccaaa----aaaaattctttaatcattctcaaatatctgcatgatcataacttgtacttacttgtc-aaaatcaataaataaatcatgcatta 16636  T
Q  478 ataaacccgttgaacaca 495  Q
    ||||||||||||||||||    
T  16635 ataaacccgttgaacaca 16618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0582 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0582
Description:

Target: scaffold0582; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 230 - 497
Target Start/End: Complemental strand, 4544 - 4286
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt- 328  Q
    ||||||||| || |||||||||||||||| |||| |||||||||||  | ||||||||||||||| | | |  |  |||||||||||||||| ||| ||     
T  4544 ttttcaaaaaaa-atcctttcgtcccgcctgagacgaaagtgaactcatttagggctttttgcttcatgcatcttccatcattaataaaaag-tcgattc 4447  T
Q  329 gatcccgactttgcttttatttttgtgctttttcttggaaaatggtaa-tacaaaaaacagaagnnnnnnnntaataa-aatcattctcaaatgtctgca 426  Q
    ||||||||||||| ||||||||| ||||||||||| | |||||||||| ||||||||||  ||          ||||| ||||||| |||||| ||||||    
T  4446 gatcccgactttgtttttatttt-gtgctttttctagaaaaatggtaaatacaaaaaaccaaaa---------aataataatcattttcaaatatctgca 4357  T
Q  427 taatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacacaat 497  Q
    ||||||||||||||||||||| ||| |||||| ||||| |||||||||||||||||||||||||||||||||    
T  4356 taatcataactttcatttactcgtc-aaaatcaataatcaaatcatgcattaataaacccgttgaacacaat 4286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 235 - 497
Target Start/End: Original strand, 32548 - 32806
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcc 333  Q
    |||| |||||||||||||||||||||||| |||||||||||  ||||||||||||||| ||||| ||||| |||||||||||||||||||| ||||||||    
T  32548 aaaaaaacatcctttcgtcccgcccgagacgaaagtgaacttatgtagggctttttgcattaag-aattgccatcattaataaaaaggtcgttttgatcc 32646  T
Q  334 cgactttgcttttatttttgtgctttttcttgg---aaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataat 430  Q
    |||||||| ||||  ||||||||||||| |  |   ||||||||||||||||||||  ||            |   ||||||||||||| ||||||||||    
T  32647 cgactttgttttttattttgtgctttttttctgaaaaaaatggtaatacaaaaaaccaaaaaatc-------ttttatcattctcaaatatctgcataat 32739  T
Q  431 cataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacacaat 497  Q
    ||||||||  | |||||||| |||||||  | || ||||||||||||||||||||| |||||||||||    
T  32740 cataacttgtacttacttgt-aaaaatcattgatcaaatcatgcattaataaaccccttgaacacaat 32806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 33285 - 33172
Alignment:
Q  75 cttttcgaaggttgaattcagacacgcaagataatccactaacgggttatattccttggtattgcgacacatggggtggtcagccgtaattggaccgttg 174  Q
    ||||||||||||||||||||||| |||||||||||||||||||  |||||||||| |||||||||||||||||| ||| | ||||||||||||  |||||    
T  33285 cttttcgaaggttgaattcagacgcgcaagataatccactaacatgttatattccctggtattgcgacacatggagtgtttagccgtaattgggtcgttg 33186  T
Q  175 ttgacgttccttcc 188  Q
    ||||||||||||||    
T  33185 ttgacgttccttcc 33172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 251 - 387
Target Start/End: Complemental strand, 191537 - 191401
Alignment:
Q  251 gtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatt 349  Q
    ||||||||||||| ||||||||||| ||||||  ||||||||||||||  ||||||||||||||||||||||||| ||||| |||||||||| ||||| |    
T  191537 gtcccgcccgagacgaaagtgaacttgtgtagaactttttgctttaag-cattgtcatcattaataaaaaggtcgttttgaccccgactttgttttta-t 191440  T
Q  350 tttgtgctttttcttgg-aaaatggtaatacaaaaaaca 387  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  191439 tttgtgctttttcttggaaaaatggtaaaacaaaaaaca 191401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 495
Target Start/End: Complemental strand, 191381 - 191292
Alignment:
Q  406 aatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacaca 495  Q
    |||||||||||||| | |||||||||||||  |  | ||||||||||||| || ||||| |||||||||||  ||||||||||||||||||    
T  191381 aatcattctcaaatatatgcataatcataatctatacttacttgtcaaaa-tcaataatcaaatcatgcatcgataaacccgttgaacaca 191292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 243 - 450
Target Start/End: Original strand, 75417 - 75624
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttg 341  Q
    ||||||||||||||||| ||| |||||||||||  |||||||||||||||||||||  || |||||| ||||||||||||||| ||||||||| ||||||    
T  75417 atcctttcgtcccgcccaagacgaaagtgaacttatgtagggctttttgctttaag-catcgtcatcgttaataaaaaggtcgttttgatcccaactttg 75515  T
Q  342 cttttatttttgtg--ctttttcttgg-aaaatggtaatacaaaaaacagaagnnnnnnnntaataa-aatcattctcaaatgtctgcataatcataact 437  Q
     ||||  |||||||   |||||||||| ||||||||||||||||||||  ||         |||||| ||||||||| ||||||||||||||||||||||    
T  75516 tttttcattttgtgttttttttcttggaaaaatggtaatacaaaaaaccaaa----aaaaataataataatcattcttaaatgtctgcataatcataact 75611  T
Q  438 ttcatttacttgt 450  Q
    ||| |||||||||    
T  75612 ttcgtttacttgt 75624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 445 - 496
Target Start/End: Original strand, 89001 - 89052
Alignment:
Q  445 acttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacacaa 496  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  89001 acttgtcaaaaatcaataataaatcatgcattaataaacccgttgaacacaa 89052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 69; Significance: 9e-31; HSPs: 3)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 196 - 386
Target Start/End: Complemental strand, 8679 - 8489
Alignment:
Q  196 tttgttcaaataatgt-ttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctt 294  Q
    ||||||||| |||| | ||||||||||||||  ||||| ||||| || ||||||||||||| ||||||| ||||||||||| || ||||||||||| |||    
T  8679 tttgttcaattaatatgttgtttgttgctttatgttttacaaaaaaaaatcctttcgtcccacccgagacgaaagtgaacttgtttagggctttttcctt 8580  T
Q  295 taagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    || |  ||| |||||||||||||||   ||| |||||||||||||||| |||||   |||||||| ||||||||||||||||||||| |||||    
T  8579 tacg-tattttcatcattaataaaataatcgctttgatcccgactttgttttta-ccttgtgcttgttcttggaaaatggtaatacataaaac 8489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 212 - 320
Target Start/End: Original strand, 11062 - 11169
Alignment:
Q  212 ttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcat 311  Q
    ||||||||||||||  ||||||||||| || || |||||||||| |||| || |||||||||||  | ||||| ||||||||||| |  ||| |||||||    
T  11062 ttgtttgttgctttatgtttttcaaaaaaaaattctttcgtcccacccgtgacgaaagtgaacttatttaggggtttttgctttacg-tattttcatcat 11160  T
Q  312 taataaaaa 320  Q
    |||||||||    
T  11161 taataaaaa 11169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 485
Target Start/End: Original strand, 11222 - 11301
Alignment:
Q  406 aatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataat-aaatcatgcattaataaaccc 485  Q
    |||||||  ||||||| ||||| ||||||||||| ||||||||||| | |||| ||||| |||||||||||||||||||||    
T  11222 aatcatttccaaatgtttgcatgatcataacttttatttacttgtc-agaatcaataatcaaatcatgcattaataaaccc 11301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0551 (Bit Score: 66; Significance: 6e-29; HSPs: 2)
Name: scaffold0551
Description:

Target: scaffold0551; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 406 - 495
Target Start/End: Complemental strand, 9352 - 9264
Alignment:
Q  406 aatcattctcaaatgtctgcataatcataactttcatttacttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacaca 495  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||| || | ||||||||||||||||||||||||||||||||||    
T  9352 aatcattgtcaaatgtctgcataatcataactttcatttacttgtc-aaagtcaacaataaatcatgcattaataaacccgttgaacaca 9264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0551; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 9420 - 9354
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaa 297  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  9420 ttttcaaaa-aacatcctttcgtcccgcccgagacgaaagtgaactcatgtagggctttttgctttaa 9354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 243 - 497
Target Start/End: Original strand, 12489 - 12741
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgtttgatcccgactttgc 342  Q
    ||||||||||||||||| ||| |||||||||||  | ||||||||||||||| | | |  |  ||||||||||||||||    |||||||||||||||||    
T  12489 atcctttcgtcccgcccaagacgaaagtgaacttatttagggctttttgcttcaggcatgttccatcattaataaaaagtcactttgatcccgactttgc 12588  T
Q  343 tttt-atttttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataactttca 441  Q
    |||| ||||||||| ||||||| | ||||||||||||||||||||  ||         |  |  ||||||| |||| | ||||||||||||||||||  |    
T  12589 tttttatttttgtgttttttctagaaaaatggtaatacaaaaaacccaa---aaaaattcttttaatcattttcaattatctgcataatcataacttata 12685  T
Q  442 tttacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacacaat 497  Q
     ||||| ||| |||||| ||||| ||||||||||||||||||||| |||||||||||    
T  12686 cttactcgtc-aaaatcaataatcaaatcatgcattaataaaccctttgaacacaat 12741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 140 - 382
Target Start/End: Original strand, 152900 - 153143
Alignment:
Q  140 gacacatggggtggtcagccgtaattggaccgttgttgacgttccttccgctactt-tttgttcaaataatgt--ttgtttgttgctttgcgtttttcaa 236  Q
    ||||| ||| ||||| ||||| ||||||  || |||||| ||| ||| |||||||  ||||||||||||||||  |||||||||| |||  |||||||||    
T  152900 gacacttggagtggttagccgcaattgggtcgctgttgatgtttctttcgctactcatttgttcaaataatgtgtttgtttgttgttttctgtttttcaa 152999  T
Q  237 aagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccg 335  Q
    || || ||||||||||  ||||||||| ||||||||||| ||||||||||||||||||   | | ||  |||||||||| |||| | || ||||||||||    
T  153000 aaaaa-atcctttcgtttcgcccgagacgaaagtgaacttgtgtagggctttttgcttcttgtattttccatcattaattaaaaagccgttttgatcccg 153098  T
Q  336 actttgcttttatttttgtgctttttcttggaaaatggtaatacaaa 382  Q
    || |||  |||  |||| |||||||||| | ||||||||||||||||    
T  153099 accttg--tttcattttatgctttttctggaaaaatggtaatacaaa 153143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 243 - 386
Target Start/End: Original strand, 165950 - 166093
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggcttttt-gctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgacttt 340  Q
    ||||||||||||| |||||||   ||||||||| || ||||||||||| |||||  |   || ||||||||||| |||| |||| |||||||||||||||    
T  165950 atcctttcgtcccacccgagactgaagtgaacttgtttagggcttttttgctttgtgtcttt-tcatcattaattaaaaagtcgctttgatcccgacttt 166048  T
Q  341 gcttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    | ||||||||| ||||||||||| | ||||||||||||||||||||    
T  166049 gtttttatttt-gtgctttttctagaaaaatggtaatacaaaaaac 166093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1661 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1661
Description:

Target: scaffold1661; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 445 - 496
Target Start/End: Original strand, 511 - 562
Alignment:
Q  445 acttgtcaaaaatcgataataaatcatgcattaataaacccgttgaacacaa 496  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  511 acttgtcaaaaatcaataataaatcatgcattaataaacccgttgaacacaa 562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 247 - 497
Target Start/End: Original strand, 302241 - 302480
Alignment:
Q  247 tttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttgcttt 345  Q
    ||||||||||||| ||| |||||||||||  | ||||||||||||||| | | | ||  |||||||||||| || || |||| |||||||||||||        
T  302241 tttcgtcccgcccaagacgaaagtgaacttatttagggctttttgcttcaggcattttccatcattaataagaaagttgttttgatcccgactttg---- 302336  T
Q  346 tatttttgtgctttttcttggaaaa-tggtaatacaaaaaacagaagnnnnnnnntaataa-aatcattctcaaatgtctgcataatcataactttcatt 443  Q
      ||||||||||||||  ||||||| |||||||||||||||   ||          ||||| ||||||| ||||||| |||||||||||||||||  | |    
T  302337 --tttttgtgcttttttatggaaaaatggtaatacaaaaaaaccaaaa--------aataataatcattttcaaatgcctgcataatcataacttatact 302426  T
Q  444 tacttgtcaaaaatcgataat-aaatcatgcattaataaacccgttgaacacaat 497  Q
    |||  ||||||| || ||||| |||||||||||||||||||||||||||||||||    
T  302427 tacccgtcaaaa-tcaataatcaaatcatgcattaataaacccgttgaacacaat 302480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 208 - 385
Target Start/End: Complemental strand, 70899 - 70724
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttc-aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtc 306  Q
    ||||||||||||||||||  |||| || |||| || |||||| |||||| ||||||  | ||||||||| || ||||||||||||||||| |  ||| ||    
T  70899 atgtttgtttgttgctttatgtttgtccaaaaaaaaatccttccgtcccacccgaggcgcaagtgaacttgtttagggctttttgctttatg-tattttc 70801  T
Q  307 atcattaataaaaaggtcgt-ttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaaa 385  Q
    |||| ||||  ||||||||| | |||||| || ||| ||||| ||||||||||||||| | |||||||||||||||||||    
T  70800 atcactaat-gaaaggtcgtctcgatcccaaccttg-tttta-ttttgtgctttttctggaaaaatggtaatacaaaaaa 70724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 70653 - 70624
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  70653 aaatcatgcattaataaacccgttgaacac 70624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 384
Target Start/End: Complemental strand, 5063 - 4887
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaaca---tcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattg 304  Q
    ||||||||||||||||||  ||||||||||| || |   |||||||||||  ||||||  ||||||||| | || |||||||| |||||||| | | ||     
T  5063 atgtttgtttgttgctttatgtttttcaaaaaaaaaaaatcctttcgtcctacccgaggcgaaagtgaatttgtttagggcttcttgctttatgtattt- 4965  T
Q  305 tcatcattaataaaaaggtcgt-ttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaatacaaaaa 384  Q
    |||| ||| || ||| |||||| ||||||||||| ||| ||||||||| ||||||||||| | ||||||||||||||||||    
T  4964 tcattattgatgaaa-ggtcgtcttgatcccgaccttg-ttttatttt-gtgctttttctggaaaaatggtaatacaaaaa 4887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 4819 - 4790
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  4819 aaatcatgcattaataaacccgttgaacac 4790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 280 - 384
Target Start/End: Complemental strand, 59788 - 59686
Alignment:
Q  280 tagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaata 378  Q
    ||||||||||||||||| | | || ||||||||||| ||| |||||| ||||||||||| ||| ||||||||| ||||||||||| | ||||||||||||    
T  59788 tagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtcttgatcccgaccttgtttttatttt-gtgctttttctggaaaaatggtaata 59692  T
Q  379 caaaaa 384  Q
    ||||||    
T  59691 caaaaa 59686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 59618 - 59589
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  59618 aaatcatgcattaataaacccgttgaacac 59589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 378
Target Start/End: Complemental strand, 28688 - 28502
Alignment:
Q  194 tttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaaca----tcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttt 289  Q
    |||||||||||||||||| ||||||||   ||  ||||||||||| || |    ||||||||||| ||| ||||  |||||||||| |||| ||||| ||    
T  28688 tttttgttcaaataatgtgtgtttgttatcttatgtttttcaaaaaaaaaaaaatcctttcgtcctgcctgagacaaaagtgaacttgtgttgggctgtt 28589  T
Q  290 tgctttaagaaattgtcatcattaataaaaaggtcgtttgatcccgactttgcttttatttttgtgctttttcttggaaaatggtaata 378  Q
     |||| | | | ||  ||||||||||||||||    |||||||||||||||| ||||| |||||||||||| || | ||||||||||||    
T  28588 -gcttcatgtattttccatcattaataaaaagtcattttgatcccgactttgttttta-ttttgtgcttttcctggaaaaatggtaata 28502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 384
Target Start/End: Original strand, 125564 - 125696
Alignment:
Q  250 cgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttgcttttat 348  Q
    |||||| ||||||  || |||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||  ||||||||||| ||| ||||||    
T  125564 cgtcccacccgaggcgagagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgacttgatcccgaccttgtttttat 125661  T
Q  349 ttttgtgctttttcttggaaaatggtaatacaaaaa 384  Q
    ||| ||||||||||| | ||||||||||||||||||    
T  125662 ttt-gtgctttttctggaaaaatggtaatacaaaaa 125696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 125765 - 125794
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  125765 aaatcatgcattaataaacccgttgaacac 125794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0545 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0545
Description:

Target: scaffold0545; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 386
Target Start/End: Complemental strand, 254 - 211
Alignment:
Q  343 ttttatttttgtgctttttcttggaaaatggtaatacaaaaaac 386  Q
    ||||||||| ||||||||||| | ||||||||||||||||||||    
T  254 ttttattttagtgctttttctggaaaaatggtaatacaaaaaac 211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 352
Target Start/End: Original strand, 4242 - 4331
Alignment:
Q  265 gaaagtgaactggtgtagggctttttgctttaagaaattgtcatcat-taataaaaaggtcgtttga-tcccgactttgcttttattttt 352  Q
    |||||||||||  ||||||||||||||||| ||||||||  ||||||  |||||||| || |||| | ||||||||||  ||||||||||    
T  4242 gaaagtgaacttatgtagggctttttgcttcaagaaattaccatcatcaaataaaaatgttgtttcattcccgacttttgttttattttt 4331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 19582 - 19611
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  19582 aaatcatgcattaataaacccgttgaacac 19611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 142453 - 142424
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  142453 aaatcatgcattaataaacccgttgaacac 142424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 19651 - 19680
Alignment:
Q  465 aaatcatgcattaataaacccgttgaacac 494  Q
    ||||||||||||||||||||||||||||||    
T  19651 aaatcatgcattaataaacccgttgaacac 19680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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