View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0818_high_57 (Length: 251)
Name: NF0818_high_57
Description: NF0818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0818_high_57 |
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Alignment Details
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 45023977 - 45024203
Alignment:
| Q |
1 |
attatttcttatcggctactctttggagtgtggtacaaagccacctttgtaaaacggtcgataaaatacacatgaaaaataggaagaat-----cggcgt |
95 |
Q |
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| T |
45023977 |
attatttcttatcggctactctttggagtgtggtacacagccacctttgtaaaacggtcgataaaaaacacatgaaaaataggaagaatcgaatcggcgt |
45024076 |
T |
|
| Q |
96 |
tgtatttaattaattaatgctaactaacttgatatatatgttaaccgataaaaactgacacacaaaagagttaattatgttaaagacaacaaaactcttg |
195 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
45024077 |
tgtatttaattaattaatgctaactaacttgatatatatgttaaccgataaaaactgacacacaaaagagttaattatgttaaagacaagaaaactcttg |
45024176 |
T |
|
| Q |
196 |
aaaaatgagaaaagctgcatgagtgac |
222 |
Q |
| |
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||||||||||||||||||||||||||| |
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| T |
45024177 |
aaaaatgagaaaagctgcatgagtgac |
45024203 |
T |
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