View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0818_low_108 (Length: 204)
Name: NF0818_low_108
Description: NF0818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0818_low_108 |
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Alignment Details
Target: chr1 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 59382 - 59285
Alignment:
| Q |
20 |
cttttatgtctccatttttagattcttgtttattggaagtttcagctataggatttcctgccctaagctctttttgcttcttcttctgcttcatctca |
117 |
Q |
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| T |
59382 |
cttttatgtctccatttttagattcttgtttattggaagtttcagctatagaatttcctgccctaagctctttttgcttcttcttctgcttcttctca |
59285 |
T |
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