View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0818_low_26 (Length: 456)

Name: NF0818_low_26
Description: NF0818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0818_low_26
NF0818_low_26
[»] chr8 (28 HSPs)
chr8 (1-446)||(26560594-26561043)
chr8 (1-217)||(1376489-1376706)
chr8 (1-214)||(3616463-3616677)
chr8 (1-213)||(6109923-6110136)
chr8 (1-213)||(24891045-24891258)
chr8 (1-211)||(24789814-24790025)
chr8 (1-213)||(25500350-25500563)
chr8 (1-213)||(2620557-2620768)
chr8 (1-209)||(30801548-30801757)
chr8 (11-213)||(19643111-19643315)
chr8 (1-213)||(1667467-1667668)
chr8 (1-185)||(25419557-25419744)
chr8 (1-185)||(25427897-25428084)
chr8 (1-213)||(20216521-20216733)
chr8 (1-213)||(20236119-20236331)
chr8 (88-186)||(2472076-2472174)
chr8 (1-87)||(7057909-7057998)
chr8 (4-213)||(15542521-15542730)
chr8 (1-48)||(29527954-29528001)
chr8 (132-213)||(7583769-7583850)
chr8 (125-214)||(29527793-29527882)
chr8 (1-115)||(25178658-25178772)
chr8 (1-43)||(33212548-33212590)
chr8 (1-118)||(37226401-37226518)
chr8 (1-72)||(43511485-43511556)
chr8 (1-48)||(43239477-43239526)
chr8 (165-210)||(15959877-15959922)
chr8 (147-203)||(7058017-7058073)
[»] chr5 (37 HSPs)
chr5 (2-213)||(7978333-7978545)
chr5 (1-213)||(14645617-14645830)
chr5 (1-213)||(29456092-29456304)
chr5 (1-186)||(14088569-14088755)
chr5 (1-186)||(14087964-14088150)
chr5 (1-213)||(41692049-41692261)
chr5 (1-213)||(31149296-31149509)
chr5 (2-213)||(18595662-18595874)
chr5 (1-213)||(34718365-34718577)
chr5 (1-216)||(15718788-15718998)
chr5 (1-179)||(22631874-22632053)
chr5 (1-151)||(6224503-6224652)
chr5 (1-213)||(41616885-41617090)
chr5 (3-213)||(19254029-19254239)
chr5 (1-115)||(4572569-4572684)
chr5 (4-213)||(1061264-1061474)
chr5 (1-180)||(6277427-6277606)
chr5 (1-212)||(10937738-10937948)
chr5 (1-115)||(36470193-36470307)
chr5 (2-210)||(6311273-6311481)
chr5 (11-169)||(41983545-41983704)
chr5 (126-213)||(4898353-4898440)
chr5 (54-213)||(15673469-15673629)
chr5 (5-79)||(24488821-24488895)
chr5 (15-180)||(35853883-35854049)
chr5 (1-48)||(42031248-42031295)
chr5 (167-213)||(19549877-19549923)
chr5 (1-109)||(23137890-23137999)
chr5 (1-176)||(25694296-25694470)
chr5 (1-213)||(38310091-38310303)
chr5 (1-46)||(19549710-19549755)
chr5 (1-48)||(639062-639109)
chr5 (1-48)||(16187129-16187176)
chr5 (1-44)||(25828189-25828231)
chr5 (1-178)||(30775158-30775336)
chr5 (127-213)||(24488681-24488767)
chr5 (1-109)||(5657311-5657419)
[»] chr1 (57 HSPs)
chr1 (1-213)||(28221267-28221480)
chr1 (1-213)||(9222543-9222756)
chr1 (2-212)||(236817-237027)
chr1 (1-214)||(13313035-13313249)
chr1 (1-213)||(44327527-44327739)
chr1 (1-213)||(19506684-19506896)
chr1 (1-213)||(2978717-2978930)
chr1 (1-213)||(35978103-35978316)
chr1 (7-213)||(32835106-32835313)
chr1 (1-212)||(21260345-21260555)
chr1 (1-213)||(29054199-29054412)
chr1 (1-214)||(945780-945994)
chr1 (1-213)||(4892875-4893087)
chr1 (1-213)||(29185400-29185612)
chr1 (1-213)||(25059401-25059614)
chr1 (1-213)||(42068721-42068933)
chr1 (1-213)||(33362478-33362690)
chr1 (7-214)||(38491727-38491935)
chr1 (1-186)||(48963995-48964175)
chr1 (11-210)||(19996278-19996477)
chr1 (1-186)||(25814954-25815132)
chr1 (7-186)||(424874-425054)
chr1 (18-213)||(43634132-43634327)
chr1 (1-209)||(33794012-33794214)
chr1 (1-213)||(2974841-2975054)
chr1 (1-213)||(2433512-2433724)
chr1 (11-213)||(7842865-7843068)
chr1 (23-213)||(27783823-27784013)
chr1 (1-213)||(20415281-20415492)
chr1 (1-109)||(3191784-3191892)
chr1 (1-109)||(3200602-3200710)
chr1 (1-109)||(3209439-3209547)
chr1 (1-214)||(30489961-30490174)
chr1 (1-94)||(12560329-12560423)
chr1 (1-213)||(10786501-10786713)
chr1 (17-214)||(611037-611235)
chr1 (1-213)||(32133819-32134032)
chr1 (1-214)||(7815202-7815414)
chr1 (1-213)||(28192036-28192249)
chr1 (1-57)||(29511973-29512029)
chr1 (1-115)||(13796766-13796879)
chr1 (1-213)||(14106613-14106826)
chr1 (4-212)||(29425790-29425999)
chr1 (1-112)||(35659840-35659944)
chr1 (3-109)||(8981267-8981373)
chr1 (4-213)||(40093859-40094069)
chr1 (1-118)||(2465270-2465387)
chr1 (1-73)||(22579880-22579952)
chr1 (1-109)||(31107353-31107461)
chr1 (1-48)||(16176758-16176805)
chr1 (1-103)||(46772110-46772212)
chr1 (76-213)||(39027147-39027285)
chr1 (97-213)||(29511828-29511944)
chr1 (1-48)||(47665694-47665741)
chr1 (1-43)||(3821050-3821092)
chr1 (1-45)||(34321339-34321383)
chr1 (163-215)||(48874879-48874931)
[»] chr4 (65 HSPs)
chr4 (1-213)||(52180361-52180574)
chr4 (1-210)||(23147715-23147925)
chr4 (1-214)||(29148602-29148816)
chr4 (1-213)||(32655106-32655319)
chr4 (1-186)||(42755651-42755837)
chr4 (1-213)||(42052854-42053067)
chr4 (1-210)||(33983447-33983657)
chr4 (1-213)||(34459218-34459431)
chr4 (5-210)||(21076140-21076346)
chr4 (1-213)||(38000906-38001119)
chr4 (1-213)||(652545-652758)
chr4 (1-213)||(3094564-3094777)
chr4 (1-215)||(53140934-53141148)
chr4 (1-212)||(52595855-52596067)
chr4 (1-215)||(1730637-1730851)
chr4 (18-213)||(28928207-28928403)
chr4 (1-214)||(25938675-25938881)
chr4 (1-154)||(2073272-2073426)
chr4 (1-186)||(8066268-8066453)
chr4 (1-113)||(2224644-2224757)
chr4 (1-204)||(21246149-21246352)
chr4 (11-209)||(7250189-7250388)
chr4 (23-213)||(12186106-12186296)
chr4 (1-214)||(54932331-54932545)
chr4 (1-208)||(41003633-41003842)
chr4 (1-213)||(14577097-14577311)
chr4 (1-216)||(1757619-1757830)
chr4 (1-213)||(3386813-3387012)
chr4 (1-118)||(22313038-22313156)
chr4 (23-213)||(2720822-2721012)
chr4 (23-186)||(12188100-12188263)
chr4 (76-213)||(52801799-52801936)
chr4 (1-213)||(46081042-46081253)
chr4 (1-210)||(22248184-22248392)
chr4 (16-181)||(54978777-54978934)
chr4 (1-213)||(46030514-46030724)
chr4 (1-212)||(29405455-29405666)
chr4 (39-213)||(38444225-38444398)
chr4 (1-213)||(33733699-33733910)
chr4 (1-109)||(52801944-52802052)
chr4 (1-213)||(45097886-45098096)
chr4 (1-109)||(24486956-24487064)
chr4 (125-213)||(13082592-13082680)
chr4 (1-48)||(4757430-4757477)
chr4 (1-103)||(7117654-7117756)
chr4 (4-115)||(8614853-8614964)
chr4 (1-52)||(27586314-27586365)
chr4 (4-180)||(11035006-11035183)
chr4 (125-214)||(8589413-8589502)
chr4 (1-180)||(28233744-28233923)
chr4 (4-103)||(8643935-8644034)
chr4 (4-213)||(31713141-31713351)
chr4 (132-214)||(22306276-22306358)
chr4 (76-213)||(26337198-26337336)
chr4 (1-43)||(44292764-44292806)
chr4 (1-109)||(9609338-9609446)
chr4 (1-45)||(14595639-14595683)
chr4 (4-213)||(22830164-22830374)
chr4 (1-48)||(41781011-41781058)
chr4 (3-113)||(46257831-46257941)
chr4 (1-47)||(9930830-9930876)
chr4 (1-47)||(12518527-12518573)
chr4 (163-213)||(19444344-19444394)
chr4 (81-213)||(39804698-39804831)
chr4 (54-213)||(23349104-23349264)
[»] chr3 (46 HSPs)
chr3 (1-217)||(25467786-25468003)
chr3 (1-213)||(11672026-11672239)
chr3 (1-213)||(19618982-19619195)
chr3 (1-213)||(5040653-5040865)
chr3 (1-213)||(24987005-24987218)
chr3 (1-186)||(39352756-39352942)
chr3 (1-213)||(23297926-23298139)
chr3 (1-213)||(41924266-41924479)
chr3 (1-213)||(44792236-44792449)
chr3 (1-213)||(49360251-49360461)
chr3 (1-213)||(45078793-45079004)
chr3 (1-186)||(50480694-50480881)
chr3 (1-213)||(14418510-14418722)
chr3 (11-213)||(48080357-48080552)
chr3 (1-155)||(22844793-22844948)
chr3 (1-213)||(42096330-42096541)
chr3 (2-159)||(40564239-40564389)
chr3 (1-113)||(6408871-6408984)
chr3 (18-186)||(13735269-13735437)
chr3 (37-213)||(50809137-50809314)
chr3 (37-213)||(50866548-50866725)
chr3 (5-211)||(30247644-30247849)
chr3 (1-213)||(46819407-46819619)
chr3 (19-204)||(39952825-39953004)
chr3 (1-213)||(32995581-32995794)
chr3 (1-213)||(36678654-36678867)
chr3 (2-118)||(50508571-50508683)
chr3 (1-212)||(41409846-41410057)
chr3 (1-177)||(10084843-10085020)
chr3 (1-213)||(26291326-26291540)
chr3 (1-109)||(9162621-9162729)
chr3 (1-109)||(46584862-46584969)
chr3 (1-177)||(10191763-10191940)
chr3 (1-208)||(28956435-28956643)
chr3 (1-109)||(38694494-38694602)
chr3 (1-49)||(43657604-43657652)
chr3 (1-48)||(2012771-2012818)
chr3 (1-48)||(27346920-27346967)
chr3 (135-210)||(42882306-42882381)
chr3 (3-45)||(2150465-2150507)
chr3 (1-47)||(35204615-35204661)
chr3 (1-80)||(1599891-1599972)
chr3 (1-46)||(5908579-5908624)
chr3 (11-56)||(12905917-12905962)
chr3 (1-46)||(35732579-35732624)
chr3 (7-103)||(39143834-39143930)
[»] chr2 (39 HSPs)
chr2 (1-213)||(25425054-25425267)
chr2 (1-213)||(33867139-33867352)
chr2 (16-213)||(4481369-4481567)
chr2 (1-212)||(29155618-29155830)
chr2 (1-186)||(3329461-3329647)
chr2 (1-210)||(30241726-30241930)
chr2 (1-213)||(23232033-23232246)
chr2 (1-213)||(4289950-4290160)
chr2 (11-213)||(667576-667771)
chr2 (1-214)||(13142172-13142378)
chr2 (1-145)||(32422404-32422549)
chr2 (1-213)||(17961056-17961261)
chr2 (1-213)||(38620689-38620902)
chr2 (11-213)||(15149826-15150029)
chr2 (1-182)||(31440269-31440443)
chr2 (1-215)||(4591794-4592000)
chr2 (1-89)||(44070130-44070219)
chr2 (1-213)||(20937372-20937569)
chr2 (1-87)||(9205472-9205559)
chr2 (1-214)||(11788960-11789174)
chr2 (4-213)||(29545575-29545785)
chr2 (1-103)||(16711057-16711159)
chr2 (1-213)||(40474796-40475009)
chr2 (1-109)||(8027156-8027264)
chr2 (132-213)||(12345095-12345176)
chr2 (5-48)||(35005121-35005164)
chr2 (5-73)||(12758060-12758128)
chr2 (81-213)||(15162370-15162503)
chr2 (155-212)||(17249290-17249347)
chr2 (125-214)||(41935053-41935142)
chr2 (1-213)||(35048970-35049175)
chr2 (1-48)||(8754230-8754277)
chr2 (1-48)||(10391392-10391439)
chr2 (1-48)||(12345253-12345300)
chr2 (4-118)||(37286957-37287072)
chr2 (1-48)||(42969373-42969420)
chr2 (163-213)||(7819819-7819869)
chr2 (163-217)||(17153824-17153878)
chr2 (1-102)||(39766757-39766858)
[»] chr7 (40 HSPs)
chr7 (1-211)||(46181520-46181731)
chr7 (1-213)||(3551135-3551340)
chr7 (1-213)||(16567874-16568087)
chr7 (1-213)||(16597575-16597788)
chr7 (2-213)||(33067076-33067288)
chr7 (1-186)||(12920619-12920805)
chr7 (1-213)||(43224625-43224838)
chr7 (1-174)||(5022822-5022996)
chr7 (1-180)||(10065884-10066064)
chr7 (1-215)||(27398896-27399111)
chr7 (1-213)||(31455207-31455412)
chr7 (1-213)||(39414872-39415085)
chr7 (1-214)||(43702003-43702223)
chr7 (1-213)||(17171801-17172013)
chr7 (2-186)||(35092360-35092543)
chr7 (1-213)||(42284812-42285025)
chr7 (5-214)||(46783379-46783589)
chr7 (1-210)||(19805334-19805543)
chr7 (1-113)||(3363268-3363381)
chr7 (1-212)||(25309112-25309322)
chr7 (1-213)||(40787892-40788104)
chr7 (1-213)||(44301033-44301245)
chr7 (32-213)||(9477894-9478082)
chr7 (1-210)||(12499151-12499361)
chr7 (1-213)||(33979182-33979395)
chr7 (1-213)||(36073633-36073846)
chr7 (2-214)||(24429915-24430127)
chr7 (3-103)||(38400686-38400786)
chr7 (1-213)||(26299740-26299953)
chr7 (2-214)||(30391905-30392118)
chr7 (1-214)||(48558225-48558438)
chr7 (1-109)||(9223990-9224098)
chr7 (3-103)||(38398144-38398244)
chr7 (1-49)||(4912481-4912529)
chr7 (4-178)||(36073030-36073204)
chr7 (125-213)||(45116297-45116385)
chr7 (1-48)||(9354884-9354931)
chr7 (1-48)||(16562259-16562306)
chr7 (1-48)||(16603356-16603403)
chr7 (1-48)||(28066967-28067014)
[»] scaffold0164 (2 HSPs)
scaffold0164 (1-213)||(6706-6919)
scaffold0164 (1-213)||(14587-14800)
[»] chr6 (21 HSPs)
chr6 (7-213)||(31071095-31071302)
chr6 (1-213)||(33331908-33332121)
chr6 (1-213)||(7808063-7808276)
chr6 (1-213)||(33328896-33329109)
chr6 (1-213)||(24446702-24446914)
chr6 (1-213)||(13532530-13532743)
chr6 (18-213)||(1329158-1329354)
chr6 (1-175)||(20691215-20691390)
chr6 (1-213)||(6337494-6337706)
chr6 (24-213)||(1221295-1221484)
chr6 (11-210)||(12429730-12429930)
chr6 (60-217)||(31783596-31783752)
chr6 (54-213)||(28770145-28770303)
chr6 (5-74)||(29641192-29641262)
chr6 (66-186)||(29640385-29640506)
chr6 (5-56)||(31511390-31511441)
chr6 (66-186)||(31510555-31510676)
chr6 (3-102)||(31538497-31538592)
chr6 (1-103)||(33959841-33959943)
chr6 (76-214)||(9061691-9061830)
chr6 (1-48)||(6799143-6799190)
[»] scaffold0230 (1 HSPs)
scaffold0230 (1-213)||(26949-27161)
[»] scaffold0312 (1 HSPs)
scaffold0312 (7-186)||(5496-5676)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-213)||(240064-240278)
scaffold0005 (1-45)||(221695-221739)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-213)||(250518-250731)
[»] scaffold0472 (1 HSPs)
scaffold0472 (1-102)||(8128-8231)
[»] scaffold0938 (1 HSPs)
scaffold0938 (1-109)||(830-938)
[»] scaffold0602 (1 HSPs)
scaffold0602 (4-103)||(5306-5405)
[»] scaffold0062 (2 HSPs)
scaffold0062 (1-109)||(23514-23622)
scaffold0062 (1-109)||(33682-33790)
[»] scaffold0249 (1 HSPs)
scaffold0249 (165-213)||(20536-20584)
[»] scaffold0242 (2 HSPs)
scaffold0242 (81-175)||(12670-12765)
scaffold0242 (81-175)||(21505-21600)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-48)||(109713-109760)
[»] scaffold0157 (1 HSPs)
scaffold0157 (1-47)||(2338-2384)


Alignment Details
Target: chr8 (Bit Score: 324; Significance: 0; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 1 - 446
Target Start/End: Complemental strand, 26561043 - 26560594
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | ||||| ||||||||||    
T  26561043 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggtaatatagtacctttacctgcgtccatacccatttaaat 26560944  T
Q  101 ttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcca 200  Q
    ||||||||||||||| || ||||||||||||||||||||  |||| ||||||| ||| | ||| ||||||||||||||||||||||| ||  ||||||||    
T  26560943 ttgtgggtattacccggacccgtccccagatccatgaaaggggggttttaccctacctattgtaggtattttttgcgggtatccatcaagtctgggtcca 26560844  T
Q  201 attgtcatccctatccacaccaagcattgagaatgtggatttgaatatgcacccaacatatcaaatgtttgtgtatccttttatggagaga----cnnnn 296  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |             
T  26560843 attgacatccctattcacaccaagcattgagaatgtggatttgaatatgcacccaacatatcaaatgtttgtgtatccttttatggagatatattttttt 26560744  T
Q  297 nnnatcttttaattcaattattaggttgtagactgaattacttttgaaaattataagtatatctattaatttaaatgctctcaccatatcaaaataaact 396  Q
       ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26560743 tttatcttttaattcaattattaggttgtagactaaattacttttgaaaattataagtatatctattaatttaaatgctctcaccatatcaaaataaact 26560644  T
Q  397 ttcagcatgaactattggatttgggacatgagctttatgttgggcctatg 446  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26560643 ttcagcatgaactattggatttgggacatgagctttatgttgggcctatg 26560594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 1376489 - 1376706
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  1376489 aaaaataaataaataatttatgatattatataaatatgtatatgcggggttgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 1376588  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    || |||||||||||||| |||||| |||| | |||| ||| ||||| ||||||| |||||| || ||||||||||||||||| |||| ||   |||||||    
T  1376589 ttggtgggtattacccatatccgtgcccaaacccataaaagcggggttttaccctacccaccgtaggtattttttgcgggtacccattgaatctgggtcc 1376688  T
Q  200 aattgtcatccctatcca 217  Q
    ||||||||||||||||||    
T  1376689 aattgtcatccctatcca 1376706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 3616677 - 3616463
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||     
T  3616677 aaaaataaataaataatttatgatattatataaatatgtatattcggggttgcgggtctgggcagtatagtacccttacccgtgcccatatccatttaat 3616578  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | |||| |||||| |||| ||| ||||| ||||||| ||||| ||||||||||||||||||||| |||| | |  |||||||    
T  3616577 tttgtgggtattacccgtacccgtgcccagacccataaaagcggggttttaccctacccattgtgggtattttttgcgggtacccattgggtctgggtcc 3616478  T
Q  200 aattgtcatccctat 214  Q
    ||||| |||||||||    
T  3616477 aattgccatccctat 3616463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 6109923 - 6110136
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggc-tgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| | |||||||    
T  6109923 aaaaataaataaattacttatgatattaaataaatatgtatatgcggggttgcgggcctgggcactatagtacctttacccgtgcccataactatttaaa 6110022  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    || |||||||||||||||| ||||||||||| |||||| |  |||  ||||||| ||||| |||||||||||| ||| ||||||||| || | |||||||    
T  6110023 ttcgtgggtattacccagacccgtccccagacccatgatagtgggattttaccctacccattgtgggtattttatgcaggtatccattgaacatgggtcc 6110122  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  6110123 aattgccatcccta 6110136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 24891258 - 24891045
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| ||||||||||| | ||||||||||||||||||||||||| ||||||| |||| |||| |||||||||||||| | || |||||    
T  24891258 aaaaataaataaattacttatgatattaaataaatatgtatatgcggggttgcggggctgggcagtataatacccttacccgtgcccatcttcaattaaa 24891159  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    |||||||||||||||| || || |||||||| |||||| | ||||| ||||||| ||||| |||||||||||| ||||||||||| | | || |||||||    
T  24891158 tttgtgggtattacccggacccatccccagacccatgatagcggggttttaccctacccattgtgggtattttatgcgggtatccgttgggcctgggtcc 24891059  T
Q  200 aattgtcatcccta 213  Q
    ||||||||| ||||    
T  24891058 aattgtcatgccta 24891045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 24789814 - 24790025
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||  || ||| ||||||| ||||||| | ||||||||||||||||||||||||     
T  24789814 aaaaataaataaataatttatgatattatataaatatgtatatgcgggtctgtgggtctgggcagtatagtatccttacccgtgcccatatccatttaat 24789913  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | |||| ||||||||||| ||| ||||| ||||||| ||||| ||||| |||||||||||||||| ||| | |  |||||||    
T  24789914 tttgtgggtattacccgtacccgtgcccagatccataaaagcggggttttaccctacccattgtggatattttttgcgggtattcattgggtctgggtcc 24790013  T
Q  200 aattgtcatccc 211  Q
    ||||| ||||||    
T  24790014 aattgccatccc 24790025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 25500350 - 25500563
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||||||||| ||||||| || |||| |||| ||||| |||||||| | || |||||    
T  25500350 aaaaataaataaattacttatgatattaaataaatatgtatatgcggggttgcagggctggacagtataatacccttacctgtgcccatcttcaattaaa 25500449  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    || ||||||||||||| || ||||||||||| |||||| | ||| | ||||||| ||| | |||||||||||| ||||||||||||| | || |||||||    
T  25500450 ttcgtgggtattacccggacccgtccccagacccatgatagcggagttttaccctacctattgtgggtattttatgcgggtatccattgggcctgggtcc 25500549  T
Q  200 aattgtcatcccta 213  Q
    ||||||||||||||    
T  25500550 aattgtcatcccta 25500563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 2620768 - 2620557
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||||  |||||| ||||||| ||||||| | ||| ||||||||||  ||||| |||    
T  2620768 aaaaataaataaattacttatgatattaaataaatatgtatatgcggg--tgcggggctgggcagtatagtatccttatccgtgcccatgcccattaaaa 2620671  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    || ||||||||||||| || ||||||||||| |||||| | ||||| ||||||| ||||| ||||| |||||| ||||||||||||| | || |||||||    
T  2620670 ttcgtgggtattacccggacccgtccccagacccatgatagcggggttttaccctacccattgtggatattttatgcgggtatccattgggcctgggtcc 2620571  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  2620570 aattgccatcccta 2620557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 30801548 - 30801757
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||| ||| | | ||||||||| ||||||||||||||| |||||||||    
T  30801548 aaaaatatataaattatctatgatattatataaatatgtatatgcggggttgcggggctgagtagtatagtacccttacccgtgcccatacccatttaaa 30801647  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||| ||||||||||||||| |||| |||| | |||||||| |||   ||||||  ||||| ||||| ||||||||||| ||||||||||  | ||||| |    
T  30801648 tttatgggtattacccagacccgtgcccaaacccatgaaagcggaattttaccgtacccattgtggatattttttgcgagtatccatcggacctgggttc 30801747  T
Q  200 aattgtcatc 209  Q
    ||||| ||||    
T  30801748 aattgccatc 30801757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 11 - 213
Target Start/End: Complemental strand, 19643315 - 19643111
Alignment:
Q  11 aaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggta 109  Q
    |||||| |||| |||||| | ||||||||||||||||||||||||| | ||||| ||||||||| |||||  |||||||| |||||||||||||||||||    
T  19643315 aaattacttataatattaaataaatatgtatatgcggggttgcggggcagggcagtatagtacccttaccattgcccatacccatttaaatttgtgggta 19643216  T
Q  110 ttacccagatccgtccccagatccatgaaaac-ggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcat 208  Q
    |||||| ||  |||||||||| |||||| | | |||| ||||||| ||||| ||||| |||||| ||||||||||||| | || |||||||||||| |||    
T  19643215 ttacccggacacgtccccagacccatgatagcgggggttttaccctacccattgtggatattttatgcgggtatccattgggcatgggtccaattgccat 19643116  T
Q  209 cccta 213  Q
    |||||    
T  19643115 cccta 19643111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 1667467 - 1667668
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| ||||||||||| | ||||||||||||||||||||||||| || |||| ||||||||||||||||||| ||||| |||||||||    
T  1667467 aaaaataaataaattacttatgatattaaataaatatgtatatgcggggttgcgggcctaggcagtatagtacctttacccgtgtccatagccatttaaa 1667566  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    || ||||||||||            ||| || | |||| | ||||| ||||||| ||||| |||||||| ||| ||||||||||||| | || |||||||    
T  1667567 ttcgtgggtatta------------cccggacctatgatagcggggttttaccctacccattgtgggtaatttatgcgggtatccattgggcctgggtcc 1667654  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  1667655 aattgccatcccta 1667668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 25419557 - 25419744
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||||||||| ||||||| || |||| |||| ||||| |||||||| | || |||||    
T  25419557 aaaaataaataaattacttatgatattaaataaatatgtatatgcggggttgcggggctggacagtataatacccttacctgtgcccatcttcaattaaa 25419656  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttt--tgcgggtatcca 185  Q
    || ||| |||||| || || ||||||||||| |||||| | ||| | ||||||| ||||| |||||||||||||  ||||||||||||    
T  25419657 ttcgtgtgtattatccggacccgtccccagacccatgatagcggagttttaccctacccattgtgggtattttttatgcgggtatcca 25419744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 25427897 - 25428084
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||||||||| ||||||| || |||| |||| ||||| |||||||| | || |||||    
T  25427897 aaaaataaataaattacttatgatattaaataaatatgtatatgcggggttgcggggctggacagtataatacccttacctgtgcccatcttcaattaaa 25427996  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttt--tgcgggtatcca 185  Q
    || ||| |||||| || || ||||||||||| |||||| | ||| | ||||||| ||||| |||||||||||||  ||||||||||||    
T  25427997 ttcgtgtgtattatccggacccgtccccagacccatgatagcggagttttaccctacccattgtgggtattttttatgcgggtatcca 25428084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 20216521 - 20216733
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| |||| ||||||| ||| || | | ||||||||| ||||||||| ||||| ||||| |||    
T  20216521 aaaaataaataaagtatttattatattatataaatatgtacatgc-gggttgcggggttgagtagtatagtacccttacccgtgtccatacccattaaaa 20216619  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| |||| |||||||  | || | |||| | ||||||||  |||| ||||||| ||||| |||||||||||||||| |||  |||||| |  ||||||    
T  20216620 tttgcgggtaattaccc-tacccatgcccatacccatgaaagtggggttttaccctacccattgtgggtattttttgcaggtgcccatcgggtctgggtc 20216718  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||||||||    
T  20216719 caattgccatcccta 20216733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 20236119 - 20236331
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| |||| ||||||| ||| || | | ||||||||| ||||||||| ||||| ||||| |||    
T  20236119 aaaaataaataaagtatttattatattatataaatatgtacatgc-gggttgcggggttgagtagtatagtacccttacccgtgtccatacccattaaaa 20236217  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| |||| |||||||  | || | |||| | ||||||||  |||| ||||||| ||||| |||||||||||||||| |||  |||||| |  ||||||    
T  20236218 tttgcgggtaattaccc-tacccatgcccatacccatgaaagtggggttttaccctacccattgtgggtattttttgcaggtgcccatcgggtctgggtc 20236316  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||||||||    
T  20236317 caattgccatcccta 20236331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 2472174 - 2472076
Alignment:
Q  88 tatccatttaaatttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccat 186  Q
    |||||||||||||| ||||||||||||| || || |||||||| |||||| | ||||| ||||||| ||||| ||||| |||||| |||||||||||||    
T  2472174 tatccatttaaattcgtgggtattacccggacccttccccagacccatgatagcggggttttaccctacccattgtggatattttatgcgggtatccat 2472076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 7057909 - 7057998
Alignment:
Q  1 aaaaataaataaattatttatgatatta--tacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgccca 87  Q
    ||||||||||||||||| ||||||||||  || |||||| ||||||||| ||||| |||||||| | ||||||||| |||||||||||||    
T  7057909 aaaaataaataaattatctatgatattatgtagaaatatatatatgcggtgttgcggggctgggtagtatagtacccttacccgtgccca 7057998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 213
Target Start/End: Original strand, 15542521 - 15542730
Alignment:
Q  4 aataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggc-tgggcaatatagtacctttacccgtgcccatatccatttaaattt 102  Q
    |||||||||| ||||||| |||||||| ||||||||||| ||||| ||| | || |||| |  ||||| || |||||||  |||||| |||| |||||||    
T  15542521 aataaataaaatatttattatattatataaatatgtataagcggg-ttgtgagcctgggtagcatagtgcccttacccgcacccatacccatctaaattt 15542619  T
Q  103 gtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaa 201  Q
    | ||||| |||||| || ||    ||| | |||| ||| ||||| |||||| | |  | || |||||||||||||||||  ||||||||| |||||||||    
T  15542620 gcgggtaattacccggacccaaggccatacccataaaagcggggttttacctatct-attgcgggtattttttgcgggtgcccatcgagcctgggtccaa 15542718  T
Q  202 ttgtcatcccta 213  Q
    ||||||||||||    
T  15542719 ttgtcatcccta 15542730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 29528001 - 29527954
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggg 48  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  29528001 aaaaataaataaattatttatcatattatataaatatgtatatgcggg 29527954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 7583769 - 7583850
Alignment:
Q  132 ccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
    |||||||| ||||| ||||||| ||||| || |||| ||||||| |||||||||||| || |||||||||||| || |||||    
T  7583769 ccatgaaagcggggttttaccctacccattgcgggttttttttgtgggtatccatcgggcctgggtccaattgccaccccta 7583850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 214
Target Start/End: Complemental strand, 29527882 - 29527793
Alignment:
Q  125 cccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatccctat 214  Q
    |||||| |||||||||||| | ||||||| ||||| |  | |||||||||||||||||||||||| | |||||| |||||  ||||||||    
T  29527882 cccagacccatgaaaacggagttttaccctacccattacgagtattttttgcgggtatccatcgaacctgggtctaattgctatccctat 29527793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 25178772 - 25178658
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |  |||| || ||| ||| || ||||||||| |||| ||| ||||||  ||||||||    
T  25178772 aaaaataaataaattatttatcatattatataaatatgtataag-tgggtagcggggttggacagtatagtacccttacgcgtacccatactcatttaaa 25178674  T
Q  100 tttgtgggtattaccc 115  Q
     ||| ||||| |||||    
T  25178673 attgcgggtaataccc 25178658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 33212548 - 33212590
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatat 43  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  33212548 aaaaataaataaattatttatcatattatataaatatgtatat 33212590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 37226518 - 37226401
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||  |||||||| |||||||||||||| ||||||| |||||| | | |||||| |||||||| |  |  |||||||| ||||    
T  37226518 aaaaataaataaaatatttactatattatataaatatgtatatgc-gggttgcagggctgtgtagtatagtgcctttacctgcacttatatccatctaaa 37226420  T
Q  100 tttgtgggtattacccaga 118  Q
    |||| ||  ||||||||||    
T  37226419 tttgcggtaattacccaga 37226401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 43511485 - 43511556
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtac 72  Q
    ||||||||||||||||||||| |||||  | |||||||| ||||| ||||||| ||||||| |||||||||||    
T  43511485 aaaaataaataaattatttatcatattggataaatatgtttatgc-gggttgcggggctggacaatatagtac 43511556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 43239477 - 43239526
Alignment:
Q  1 aaaaataaataaattatttat--gatattatacaaatatgtatatgcggg 48  Q
    |||||||||||||||||||||   |||||||| |||||||||||||||||    
T  43239477 aaaaataaataaattatttatcatatattatataaatatgtatatgcggg 43239526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 15959922 - 15959877
Alignment:
Q  165 ggtattttttgcgggtatccatcgagcttgggtccaattgtcatcc 210  Q
    |||||||||||||||| |||||| ||| |||||||||||| |||||    
T  15959922 ggtattttttgcgggtgtccatcaagcctgggtccaattgccatcc 15959877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 7058017 - 7058073
Alignment:
Q  147 tttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaatt 203  Q
    ||||||| ||| | ||||||||||||||||||||| ||||||  | |||||||||||    
T  7058017 tttaccctacctattgtgggtattttttgcgggtacccatcggacctgggtccaatt 7058073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 3e-64; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 2 - 213
Target Start/End: Original strand, 7978333 - 7978545
Alignment:
Q  2 aaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    ||||||||||||||| ||||||||||| | ||||||||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||||||||||||||    
T  7978333 aaaataaataaattacttatgatattaaataaatatgtatatgcggggttgcggggctgggcagtatagtacccttatccgtgcccatatccatttaaat 7978432  T
Q  101 ttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcca 200  Q
    ||||||||||||||| ||  |||||||||| |||||| | ||||| ||||||| ||||| |||||||||||| |||||||||| || | || ||||||||    
T  7978433 ttgtgggtattacccggactcgtccccagacccatgatagcggggttttaccctacccattgtgggtattttatgcgggtatcaattgggcctgggtcca 7978532  T
Q  201 attgtcatcccta 213  Q
    |||||||||||||    
T  7978533 attgtcatcccta 7978545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 14645617 - 14645830
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||  || ||| ||||||| ||||||||| ||||||||||||||||||||||||     
T  14645617 aaaaataaataaataatttatgatattatataaatatgtatatgcgggtctgtgggtctgggcagtatagtacccttacccgtgcccatatccatttaat 14645716  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | |||| ||||||||||| ||| ||||| ||||||| ||||| |||||||||||||||||||||||||| | |  |||||||    
T  14645717 tttgtgggtattacccgtacccgtgcccagatccataaaagcggggttttaccctacccattgtgggtattttttgcgggtatccattgggtctgggtcc 14645816  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  14645817 aattgccatcccta 14645830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 29456092 - 29456304
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||||||   |||||||||| ||||||| | ||| ||||||||||||||||| ||||    
T  29456092 aaaaataaataaattagttatgatattaaataaatatgtatatgcggggtgcggggctgggcagtatagtatccttatccgtgcccatatccattaaaat 29456191  T
Q  101 ttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcca 200  Q
    | ||||||||||||| || |||||||||||||||||| | ||||  ||||||| ||||| ||||| |||||| ||||||||||||| | || ||||||||    
T  29456192 tcgtgggtattacccggacccgtccccagatccatgatagcgggattttaccctacccattgtggatattttatgcgggtatccattgggcctgggtcca 29456291  T
Q  201 attgtcatcccta 213  Q
    |||| ||||||||    
T  29456292 attgccatcccta 29456304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 14088569 - 14088755
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  14088569 aaaaataaataaataatttatgatattatataaatatgtatatgcggggttgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 14088668  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccat 186  Q
    ||||||||||||||||  | |||| |||||| |||| ||| ||||| ||||||| ||||| |||||| |||||||||||||| ||||    
T  14088669 tttgtgggtattacccgtacccgtgcccagacccataaaagcggggttttaccctacccattgtgggcattttttgcgggtacccat 14088755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 14087964 - 14088150
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| ||||||||||| | ||||||||||||||||||||||||| ||||||| ||||||||| |||||||| |||||| |||||||||    
T  14087964 aaaaataaataaattacttatgatattaaataaatatgtatatgcggggttgcggggctgggcagtatagtacccttacccgtacccatacccatttaaa 14088063  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccat 186  Q
    || ||||||||||||| || ||||||||| | |||||| | ||||| ||||||| | |||  ||||||||||| |||||| ||||||    
T  14088064 ttcgtgggtattacccggacccgtccccatacccatgatagcggggttttaccctatccatcgtgggtattttatgcgggcatccat 14088150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 41692261 - 41692049
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| ||||||| ||||||| ||||| | ||||||||| ||||||||| ||||| ||||| |||    
T  41692261 aaaaataaataaagtatttattatattatataaatatgtacatgcggg-ttgcggggctgggtagtatagtacccttacccgtgtccatacccattaaaa 41692163  T
Q  100 tttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| ||||| ||||||  | |||| |||| |||||||||| ||||| ||||||| ||||| ||||||||||||||||||||||||||||||  ||||||    
T  41692162 tttgcgggtaattaccct-acccgtgcccatatccatgaaagcggggttttaccctacccattgtgggtattttttgcgggtatccatcgagtctgggtc 41692064  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||||||||    
T  41692063 caattgccatcccta 41692049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 31149509 - 31149296
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| |||| |||||| | || ||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||  ||||||||    
T  31149509 aaaaataaataaattacttataatattaaataagtatgtatatgcggggttgcagggctgggcagtatagtacccttacccgtgcccatactcatttaaa 31149410  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    |||||||||||||||| ||  | | |||||| |||||| | | ||| ||||||| | ||| |||||||||||| | ||||||||||| | |  |||||||    
T  31149409 tttgtgggtattacccggactcattcccagacccatgatagcagggttttaccctatccattgtgggtattttatacgggtatccattgggtctgggtcc 31149310  T
Q  200 aattgtcatcccta 213  Q
    ||||||||||||||    
T  31149309 aattgtcatcccta 31149296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 2 - 213
Target Start/End: Original strand, 18595662 - 18595874
Alignment:
Q  2 aaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    |||| |||||||||| ||||||||||| | ||||||||||||||||||||| ||| ||||||| ||||||||| |||||||||| |||| ||||||||||    
T  18595662 aaaaaaaataaattacttatgatattaaataaatatgtatatgcggggttgtggggctgggcagtatagtacccttacccgtgctcatacccatttaaat 18595761  T
Q  101 ttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcca 200  Q
    | |||| ||||| || || ||||||||||| |||||| | ||||  |||| || ||||| |||| ||||||| ||||||||||||| | || ||||||||    
T  18595762 tcgtggatattatccggacccgtccccagacccatgatagcgggattttatcctacccattgtgagtattttatgcgggtatccattgggcctgggtcca 18595861  T
Q  201 attgtcatcccta 213  Q
    |||| ||||||||    
T  18595862 attgccatcccta 18595874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 34718577 - 34718365
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| ||||||| ||||||| ||||| | |||| |||| ||||||||| ||||| ||||| |||    
T  34718577 aaaaataaataaagtatttattatattatataaatatgtacatgcggg-ttgcggggctgggtagtataatacccttacccgtgtccatacccattaaaa 34718479  T
Q  100 tttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| ||||| ||||||  | |||| |||| |||||||||| ||||| ||||||| ||||| ||||||||||||||||||||||||||||||  ||||||    
T  34718478 tttgcgggtaattaccct-acccgtgcccatatccatgaaagcggggttttaccctacccattgtgggtattttttgcgggtatccatcgagtctgggtc 34718380  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||||||||    
T  34718379 caattgccatcccta 34718365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 15718998 - 15718788
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||  |||||| ||||||| ||||||||| ||||||||| ||||| ||||||||     
T  15718998 aaaaataaataaataatttatgatattatataaatatgtatatgcgggtctgcgggtctgggcagtatagtacccttacccgtgtccatacccatttaat 15718899  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||      |||| ||| || |||| |||  |||| ||||||| ||||| |||||||||||||||||||||||||| ||   | |||||    
T  15718898 tttgtgggtattac------ccgtacccggacccataaaagtggggttttaccctacccattgtgggtattttttgcgggtatccattgaatctaggtcc 15718805  T
Q  200 aattgtcatccctatcc 216  Q
    ||||| |||||||||||    
T  15718804 aattgccatccctatcc 15718788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 22632053 - 22631874
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||| ||||||||| ||||||||||| | |||||||||||||| ||||||| |||||||||| ||||||||| ||||| ||||||||| |||||||||    
T  22632053 aaaaatgaataaattacttatgatattaaataaatatgtatatgcagggttgcagggctgggcagtatagtacccttacctgtgcccatacccatttaaa 22631954  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcggg 179  Q
    || |||||||||||||||| |||||||||||  ||||| | ||| | ||||||| ||||| ||||| |||||| ||||||    
T  22631953 ttcgtgggtattacccagacccgtccccagacacatgatagcggagttttaccctacccattgtggatattttatgcggg 22631874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 6224652 - 6224503
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||||||||| |||||||||| ||||||||  ||||||||||||||| ||||| |||    
T  6224652 aaaaataaataaattacttatgatattaaataaatatgtatatgcggggttgcggggctgggcagtatagtac--ttacccgtgcccatacccattaaaa 6224555  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttac 151  Q
    |||||||||||||||| || || |||||||| |||||| | ||||| |||||    
T  6224554 tttgtgggtattacccggacccttccccagacccatgatagcggggttttac 6224503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 41616885 - 41617090
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||        ||||||| ||||||||| ||||||||||||||| |||||||| |    
T  41616885 aaaaataaataaataatttatgatattatataaatatgtatatgcgggt-------ctgggcagtatagtacccttacccgtgcccatacccatttaatt 41616977  T
Q  101 ttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcca 200  Q
    ||| | |||||||||  | ||||  ||||| |||| ||| ||||| |||| || ||||| |||||||||||||||||||||||||| | |  ||| ||||    
T  41616978 ttgcgagtattacccgtacccgtgaccagacccataaaagcggggttttatcctacccattgtgggtattttttgcgggtatccattgggtctggatcca 41617077  T
Q  201 attgtcatcccta 213  Q
    |||| ||||||||    
T  41617078 attgccatcccta 41617090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 3 - 213
Target Start/End: Complemental strand, 19254239 - 19254029
Alignment:
Q  3 aaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatt 101  Q
    ||||||||||| ||||||| |||||||| ||||||||| ||||| | ||||||| ||||| | ||||||||| ||| ||||| ||||| ||||| |||||    
T  19254239 aaataaataaagtatttattatattatataaatatgtacatgcgag-ttgcggggctgggtagtatagtacccttatccgtgtccatacccattaaaatt 19254141  T
Q  102 tgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcca 200  Q
    || ||||| ||||||  | |||| |||| | |||||||| ||||| ||||||| ||||| |||||||||||||||| |||  |||||| |  ||||||||    
T  19254140 tgcgggtaattaccct-acccgtacccatacccatgaaagcggggttttaccctacccattgtgggtattttttgctggtgcccatcgggtctgggtcca 19254042  T
Q  201 attgtcatcccta 213  Q
    |||||||||||||    
T  19254041 attgtcatcccta 19254029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 4572569 - 4572684
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgg-gctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||| |||||| ||||||||||||||| |||| |||||||||||||||||||  ||| ||| |||| ||| |||||||||||||||||||||||||     
T  4572569 aaaaatagataaataatttatgatattatataaatttgtatatgcggggttgcggatctgagcagtataatacttttacccgtgcccatatccatttaat 4572668  T
Q  100 tttgtgggtattaccc 115  Q
    ||||||||||||||||    
T  4572669 tttgtgggtattaccc 4572684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 213
Target Start/End: Original strand, 1061264 - 1061474
Alignment:
Q  4 aataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaattt 102  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||| ||||| ||| ||||||||||||||||  |||  |||| ||||| |||||||| |||    
T  1061264 aataaataaataatttatgatattatataaacatgtatatgcgaggttgtgggtctgggcaatatagtactcttattcgtgtccatacccatttaatttt 1061363  T
Q  103 gtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaat 202  Q
    || ||||||||||  | |||| | ||||  ||| |||  |||| |||| || ||||| ||||||||||||||||||||| | || ||   ||||||||||    
T  1061364 gtaggtattacccgtacccgtgctcagactcataaaagtggggttttatcctacccattgtgggtattttttgcgggtacctattgaatctgggtccaat 1061463  T
Q  203 tgtcatcccta 213  Q
    || ||||||||    
T  1061464 tgccatcccta 1061474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 6277606 - 6277427
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| ||||||| ||||||| ||| | | ||||||||| ||||||||| ||||| ||||| |||    
T  6277606 aaaaataaataaagtatttattatattatataaatatgtacatgcggg-ttgcggggctgagtagtatagtacccttacccgtgtccatacccattaaaa 6277508  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggt 180  Q
    |||  ||||| || ||  | |||| |||| | |||||||| ||||| ||||||| ||||| ||||||||||||||||||||    
T  6277507 tttacgggtaataaccctacccgtgcccatacccatgaaagcggggttttaccctacccattgtgggtattttttgcgggt 6277427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 10937738 - 10937948
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||| |||||||| ||||||| |||||||| |||||||||||||| ||||||| |||||||| | |||||| || |||||||  |||||| |||| ||||    
T  10937738 aaaattaaataaaatatttattatattatataaatatgtatatgc-gggttgcggggctgggtagtatagtgcccttacccgcacccatacccatctaaa 10937836  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||  |  ||||||| || ||   |||| | |||| ||| ||||| ||||||| ||| | ||||||||||||||||||||| |||||| || ||||| |    
T  10937837 tttg-cgtaattacccggacccaagcccatacccataaaagcggggttttaccctacctattgtgggtattttttgcgggtacccatcgggcctgggttc 10937935  T
Q  200 aattgtcatccct 212  Q
    ||||| |||||||    
T  10937936 aattgccatccct 10937948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 36470307 - 36470193
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttg-cgggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||| |||||||  |||||||| |||||||||||||||||||||  |||||||| | |||||||| |||||||||||||||||  ||   ||    
T  36470307 aaaaataaataa-ttatttaaaatattatataaatatgtatatgcggggttgtggggctgggtagtatagtacttttacccgtgcccatattgataacaa 36470209  T
Q  100 tttgtgggtattaccc 115  Q
    ||||||||||||||||    
T  36470208 tttgtgggtattaccc 36470193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 2 - 210
Target Start/End: Original strand, 6311273 - 6311481
Alignment:
Q  2 aaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    |||||||||||||||||| | |||||||| |||||||||||||| | ||||| |||||| | |||||| |  ||||| || || ||||| ||||||||||    
T  6311273 aaaataaataaattatttgtcatattatataaatatgtatatgc-gagttgcggggctgagaaatataatgtctttatccatgtccatacccatttaaat 6311371  T
Q  101 ttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    |||||||| |||||  ||| |||| | || | |||||||| ||||| ||||||| ||||| ||  || | |||||||||||||||||||  |   |||||    
T  6311372 ttgtgggtaattacatagacccgtgcacaaacccatgaaagcggggttttaccctacccattg-aggcaatttttgcgggtatccatcggaccaaggtcc 6311470  T
Q  200 aattgtcatcc 210  Q
    |||||||||||    
T  6311471 aattgtcatcc 6311481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 41983545 - 41983704
Alignment:
Q  11 aaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggta 109  Q
    |||||| |||| |||||| | ||||||||||||| ||||||||||| |||| || || |||||| ||||| ||| ||||| ||||||||||| |||| ||    
T  41983545 aaattacttataatattaaataaatatgtatatgaggggttgcgggactggacagtaaagtacccttacctgtgtccatacccatttaaattcgtggata 41983644  T
Q  110 ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtat 169  Q
    ||||||    ||||||||||| | |||| | ||||| ||||||| ||||| ||| |||||    
T  41983645 ttacccgtccccgtccccagacctatgatagcggggttttaccctacccattgtaggtat 41983704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 4898440 - 4898353
Alignment:
Q  126 ccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
    ||||| |||||||| ||||| ||||||| ||||| || |||| ||||||| |||||||||||| |  |||||||||||| ||||||||    
T  4898440 ccagacccatgaaagcggggttttaccctacccattgcgggttttttttgtgggtatccatcgggtctgggtccaattgccatcccta 4898353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 15673629 - 15673469
Alignment:
Q  54 gggctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacc 152  Q
    |||||||| | |||||| ||  |||||||||||  | || ||||| |||| ||||| |||||| || || | |||| |||||| ||| ||||| ||||||    
T  15673629 gggctgggtagtatagtgcccgtacccgtgcccgcacccttttaagtttgcgggtaattacccggacccatgcccatatccattaaagcggggttttacc 15673530  T
Q  153 caacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
    | ||||| || |||||||||||| ||||  |||||| || |||||| ||||| ||||||||    
T  15673529 ctacccattgcgggtattttttgtgggtgcccatcgggcctgggtctaattgccatcccta 15673469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 24488895 - 24488821
Alignment:
Q  5 ataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacc 79  Q
    ||||||||||||||||| |||||||| |||| ||||||||| ||||||| | |||||||| | |||||||||||||    
T  24488895 ataaataaattatttatcatattatataaatttgtatatgc-gggttgcagagctgggcagtgtagtacctttacc 24488821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 35853883 - 35854049
Alignment:
Q  15 tatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggta-tta 112  Q
    ||||||| |||||||| |||||| |||||||||  ||||||| ||||| | || ||| ||  ||||||| |||||| |||| |||||||| ||||| |||    
T  35853883 tatttataatattatataaatatatatatgcgga-ttgcggggctgggtagtacagtgcccatacccgttcccatacccatataaatttgcgggtaatta 35853981  T
Q  113 cccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggt 180  Q
    |||| | ||   ||| ||||||||||||||||| ||||||| |||||    ||||||||||| |||||    
T  35853982 cccatacccaagcccggatccatgaaaacggggttttaccctacccataacgggtattttttacgggt 35854049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 42031248 - 42031295
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggg 48  Q
    ||||||||||||| ||||||| |||||||| |||||||||||||||||    
T  42031248 aaaaataaataaagtatttattatattatataaatatgtatatgcggg 42031295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 19549877 - 19549923
Alignment:
Q  167 tattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  19549877 tattttttgcgggtatccatcgaacctggatccaattgtcatcccta 19549923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 23137999 - 23137890
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaa-atatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaa 98  Q
    ||||||||||||| ||||||| |||||||| || ||||||| |||| ||||||| ||| ||| || ||||||||| |||| |||  || |||||||||||    
T  23137999 aaaaataaataaactatttatcatattatataagatatgtaaatgc-gggttgcgggggtggacattatagtacccttacgcgtatccgtatccatttaa 23137901  T
Q  99 atttgtgggta 109  Q
    ||||| |||||    
T  23137900 atttgcgggta 23137890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 25694470 - 25694296
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| |||||| || ||  |||||||| |||||||| | ||||||||| ||||| ||| | ||  |||||  ||    
T  25694470 aaaaataaataaagtatttattatattatataaatatatacat--ggggttgcggggctgggtagtatagtacccttacctgtgtctatgcccattacaa 25694373  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgc 176  Q
    |||| |||| |||||||  | | || |||| | |||||||| ||||| |||| || ||||| ||||||||||||||||    
T  25694372 tttgcgggtaattaccc-tacctgtgcccatacccatgaaagcggggttttatcctacccattgtgggtattttttgc 25694296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 38310091 - 38310303
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| |||| ||||||| |||||| |   ||||||||| ||| ||||  |||||| |||| |||    
T  38310091 aaaaataaataaagtatttattatattatataaatatgtacatgc-gggttgcggggctgagttgtatagtacccttatccgtctccatattcattaaaa 38310189  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||  || | |||||||  | |||| |||| | | |||||| ||||| ||||||  ||||| | | | |||||||||||| |||||||||    ||||||    
T  38310190 tttacggataattaccc-tacccgtgcccatacctatgaaagcggggttttaccatacccattatagatattttttgcggatatccatcggatctgggtc 38310288  T
Q  199 caattgtcatcccta 213  Q
    ||||||||| |||||    
T  38310289 caattgtcaacccta 38310303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19549710 - 19549755
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcg 46  Q
    ||||||||||||| ||||||| |||||||| |||||||||||||||    
T  19549710 aaaaataaataaagtatttatcatattatataaatatgtatatgcg 19549755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 639109 - 639062
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggg 48  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||||||    
T  639109 aaaaataaataaattatttatcatattatataaatacatatatgcggg 639062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 16187129 - 16187176
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggg 48  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||||||    
T  16187129 aaaaataaataaattatttatcatattatataaatacatatatgcggg 16187176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25828231 - 25828189
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatg 44  Q
    |||||||||||| ||||||||||||||||| |||||||||||||    
T  25828231 aaaaataaataa-ttatttatgatattatataaatatgtatatg 25828189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 30775158 - 30775336
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||||||| |||||||| |||||  |||||||  |||||| ||| |||| | || |||  |  |||||||||||||| |||| ||||    
T  30775158 aaaaataaataaattatttataatattatataaatacatatatgc-aggttgcggggatgggtagtacagtgtccatacccgtgcccatacccatataaa 30775256  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgg 178  Q
    |||| |||| |||||||| | ||    || |||| |||||| ||| | ||||||| |||||  |||| ||||||||||||    
T  30775257 tttgcgggtaattacccatacccaagtccggatctatgaaagcggagttttaccctacccatagtggatattttttgcgg 30775336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 24488767 - 24488681
Alignment:
Q  127 cagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
    |||| |||||||| ||||  |||| || ||| | |||| |||||||||||||  ||||||||||| ||||  |||||||||||||||    
T  24488767 cagacccatgaaagcgggattttatcctaccaattgtgagtattttttgcggtgatccatcgagcctgggctcaattgtcatcccta 24488681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 5657419 - 5657311
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||| |||||||| ||||||  |||||||| ||||||||||| || ||||||| |||||||| | |||||| || |||||||  | |||| |||| ||||    
T  5657419 aaaactaaataaaatatttactatattatataaatatgtataagc-gggttgcggggctgggtagtatagtgcccttacccgcactcatacccatctaaa 5657321  T
Q  100 tttgtgggta 109  Q
    |||| |||||    
T  5657320 tttgcgggta 5657311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 2e-62; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 28221267 - 28221480
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| ||||||||||| | ||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||||| |||||||||    
T  28221267 aaaaataaataaattacttatgatattaaataaatatgtatatgcggggttgcggggctgggcagtatagtacccttactcgtgcccatacccatttaaa 28221366  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    |||||||||||||||| || ||||||||||| |||||| | ||||| ||||||| ||||| ||||| |||||| ||||||||||||| | || |||||||    
T  28221367 tttgtgggtattacccggacccgtccccagacccatgatagcggggttttaccctacccattgtggctattttatgcgggtatccattgggcctgggtcc 28221466  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  28221467 aattgccatcccta 28221480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 9222543 - 9222756
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||  |||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  9222543 aaaaataaataaataatttatgatattatataaatatgtatatgcgggtatgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 9222642  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | |||| ||||||||||| ||| ||||| ||||||| ||||| |||||||||||||||||||||||||| | |  |||||||    
T  9222643 tttgtgggtattacccgtacccgtgcccagatccataaaagcggggttttaccctacccattgtgggtattttttgcgggtatccattgggtctgggtcc 9222742  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  9222743 aattgccatcccta 9222756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 2 - 212
Target Start/End: Original strand, 236817 - 237027
Alignment:
Q  2 aaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    |||||||||||||||| |||||||||||| |||| ||||||||  |||||||||| ||||| | ||||||| | ||||||||||||||| ||||||||||    
T  236817 aaaataaataaattatctatgatattatataaat-tgtatatgtagggttgcggggctgggtagtatagtaaccttacccgtgcccatacccatttaaat 236915  T
Q  101 ttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcca 200  Q
    ||||||||||||||| || |||| |||| | |||||||| ||||| ||||||| ||||| ||||||||||||||||||||| |||||| |||||||||||    
T  236916 ttgtgggtattacccggacccgtgcccaaacccatgaaagcggggttttaccctacccattgtgggtattttttgcgggtaaccatcgggcttgggtcca 237015  T
Q  201 attgtcatccct 212  Q
    |||| |||||||    
T  237016 attgccatccct 237027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 13313035 - 13313249
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||  |||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  13313035 aaaaataaataaataatttatgatattatataaatatgtatatgcgggtctgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 13313134  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | |||| |||||| |||  ||| ||||| ||||||| ||||| |||||||||||||||||||||||||| | |  |||||||    
T  13313135 tttgtgggtattacccgtacccgtgcccagacccagaaaagcggggttttaccctacccattgtgggtattttttgcgggtatccattgggtctgggtcc 13313234  T
Q  200 aattgtcatccctat 214  Q
    ||||| |||||||||    
T  13313235 aattgccatccctat 13313249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 44327739 - 44327527
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||     
T  44327739 aaaaataaataaataatttatgatattatataaatatgtatatgcggggttgcgggtctgggcaatatagtaccattacccgtgcccatacccatttaat 44327640  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | |||| |||||| |||| ||| ||| | ||||||| ||||| |||||||||||||||| ||||||||| | |  |||| ||    
T  44327639 tttgtgggtattacccgtacccgtgcccagacccataaaagcggagttttaccctacccattgtgggtattttttgc-ggtatccattgggtctgggccc 44327541  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  44327540 aattgccatcccta 44327527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 19506684 - 19506896
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||||||   |||||||||| ||||||| | ||| ||||||||||| ||||| ||||    
T  19506684 aaaaataaataaattagttatgatattaaataaatatgtatatgcggggtgcggggctgggcagtatagtatccttatccgtgcccatacccattaaaat 19506783  T
Q  101 ttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcca 200  Q
    | ||||||||||||| || ||||||||||| |||||| | ||||| ||||||| | ||| |||||||||||| ||||||||||||| | || ||||||||    
T  19506784 tcgtgggtattacccggacccgtccccagacccatgatagcggggttttaccctatccattgtgggtattttatgcgggtatccattgggcctgggtcca 19506883  T
Q  201 attgtcatcccta 213  Q
    |||| ||||||||    
T  19506884 attgccatcccta 19506896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 2978717 - 2978930
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||  |||||||||| | ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||| |||    
T  2978717 aaaaataaataaattacatatgatattaaataaatatgtatatgcggggttgcggggctgggcagtatagtacctttacccgtgcccatacccattaaaa 2978816  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    || |||||||||| || || ||||||||||| |||||| | ||||| ||||||| | ||| | |||||||||| ||||| ||||||| |  | |||||||    
T  2978817 ttcgtgggtattatccggacccgtccccagacccatgatagcggggttttaccctatccattatgggtattttatgcggttatccattggacctgggtcc 2978916  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  2978917 aattgccatcccta 2978930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 35978316 - 35978103
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  35978316 aaaaataaaaaaataatttatgatattatataaatatgtatatgcggggttgcgggtctgggcagtatagtaccattacccgtgcccatacccatttaat 35978217  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | |||| |||||| |||| ||| ||||  ||||||| ||||| ||||  ||||||||||||||| |||| | |  |||||||    
T  35978216 tttgtgggtattacccgtacccgtgcccagacccataaaagcgggattttaccctacccattgtgaatattttttgcgggtacccattgggtctgggtcc 35978117  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  35978116 aattgccatcccta 35978103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 32835313 - 32835106
Alignment:
Q  7 aaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtg 105  Q
    |||||||||| ||||||||||| | ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||||||||||||||| |||    
T  32835313 aaataaattacttatgatattaaataaatatgtatatgcggggttgcggggctgggcagtatagtacccttacccgtgcctatatccatttaaattcgtg 32835214  T
Q  106 ggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgt 205  Q
    |||||||||  || ||||||||||| |||||| | ||| | ||||||| ||||| |||||||||||| ||| ||||| ||| | || | ||| |||||||    
T  32835213 ggtattacctggacccgtccccagacccatgatagcggagttttaccctacccattgtgggtattttatgcaggtattcattgggcctaggttcaattgt 32835114  T
Q  206 catcccta 213  Q
    ||||||||    
T  32835113 catcccta 32835106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 21260555 - 21260345
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| ||||||||||| | |||||||||||| ||||||||| ||||| |  | ||||||||||||||||||||||||| |||||||||    
T  21260555 aaaaataaataaattacttatgatattaaataaatatgtatatacggggttgcagggctag--agtatagtacctttacccgtgcccatacccatttaaa 21260458  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    || |||||||||| || || |||||||||||||||||| ||||||| ||||||| |||||  || |||||||| ||||||||| ||| | || |||||||    
T  21260457 ttcgtgggtattatccggacccgtccccagatccatgataacggggttttaccctacccatcgtaggtattttatgcgggtattcattgggcctgggtcc 21260358  T
Q  200 aattgtcatccct 212  Q
    ||||  |||||||    
T  21260357 aattcccatccct 21260345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 29054412 - 29054199
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggct-gggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| | ||||| ||||||||| ||||||||||||||  ||||||||     
T  29054412 aaaaataaataaataatttatgatattatataaatatgtatatgcggggttgcgggtttgggcagtatagtacccttacccgtgcccatgcccatttaat 29054313  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||| ||  | |||| |||||| |||| ||| ||||| ||||||| ||||| ||| |||||||||||||||||  ||| |    |||||||    
T  29054312 tttgtgggtattatccgtacccgtacccagacccataaaagcggggttttaccctacccattgtaggtattttttgcgggtactcattggatatgggtcc 29054213  T
Q  200 aattgtcatcccta 213  Q
    ||||||||||||||    
T  29054212 aattgtcatcccta 29054199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 945780 - 945994
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||| |||||||| || |||| ||||  ||| ||||||||||||||| ||||| |||    
T  945780 aaaaataaataaattacttatgatattaaataaatatgtatatgcggagttgcgggtctaggcagtataagacccttacccgtgcccatacccattaaaa 945879  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    || ||||||||||||| || ||||||||||| |||||| | ||||| ||||| | ||||| ||||| |||||| || |||||||||| | || ||||| |    
T  945880 ttcgtgggtattacccggacccgtccccagacccatgatagcggggttttactctacccattgtggatattttatgtgggtatccattgggcctgggttc 945979  T
Q  200 aattgtcatccctat 214  Q
    |||||||||||||||    
T  945980 aattgtcatccctat 945994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 4893087 - 4892875
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| ||||||| ||||||| ||||| | ||||||||| ||||||||| ||||| ||||| |||    
T  4893087 aaaaataaataaagtatttattatattatataaatatgtacatgcggg-ttgcggggctgggtagtatagtacccttacccgtgtccatacccattaaaa 4892989  T
Q  100 tttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| ||||| ||||||  | |||| |||| |||||||||| ||||| ||||||| ||||| ||||||||||||||||||||||||||||||  ||||||    
T  4892988 tttgcgggtaattaccct-acccgtgcccatatccatgaaagcggggttttaccctacccattgtgggtattttttgcgggtatccatcgagtctgggtc 4892890  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||||||||    
T  4892889 caattgccatcccta 4892875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 29185400 - 29185612
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| ||||||| ||||||| ||||| | ||||||||| ||||||||| ||||| ||||| |||    
T  29185400 aaaaataaataaagtatttattatattatataaatatgtacatgcggg-ttgcggggctgggtagtatagtacccttacccgtgtccatacccattaaaa 29185498  T
Q  100 tttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| ||||| ||||||  | |||| |||| |||||||||| ||||| ||||||| ||||| ||||||||||||||||||||||||||||||  ||||||    
T  29185499 tttgcgggtaattaccct-acccgtgcccatatccatgaaagcggggttttaccctacccattgtgggtattttttgcgggtatccatcgagtctgggtc 29185597  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||||||||    
T  29185598 caattgccatcccta 29185612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 25059401 - 25059614
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||||| ||| || ||||||| ||||||||| ||||||||||||||||||||| |||    
T  25059401 aaaaataaataaattacttatgatattaaataaatatgtatatgcggggctgcaggtctgggcagtatagtacccttacccgtgcccatatccattaaaa 25059500  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    || ||||||||||||  || || |||||  | |||||| | ||||| ||||||| ||||| ||| |||||||| || | |||||||| |||| |||||||    
T  25059501 ttcgtgggtattacctggacccatccccgaacccatgatagcggggttttaccctacccattgtaggtattttatgtgagtatccattgagcctgggtcc 25059600  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  25059601 aattgccatcccta 25059614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 42068933 - 42068721
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||| |||||||| ||||||||||||||| ||||||||||||||||| ||||||| ||||||| ||||||||| |||||||||  |||||||||||||     
T  42068933 aaaaagaaataaataatttatgatattatataaatatgtatatgcggg-ttgcgggtctgggcagtatagtacccttacccgtgtacatatccatttaat 42068835  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  |  ||| ||||  ||||| ||| ||||| ||||||| ||||| ||||||||||||||||||||| |||| |   ||||||||    
T  42068834 tttgtgggtattacccgtactcgtgcccaagtccataaaagcggggttttaccctacccattgtgggtattttttgcgggtacccattggatttgggtcc 42068735  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  42068734 aattgccatcccta 42068721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 33362690 - 33362478
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| ||||||| ||||||| ||||| | ||||||||| ||||||||| ||||| ||||| |||    
T  33362690 aaaaataaataaagtatttattatattatataaatatgtacatgcggg-ttgcggggctgggtagtatagtacccttacccgtgtccatacccattaaaa 33362592  T
Q  100 tttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| ||||| ||||||  | |||| |||| |||||||||| ||||| |||| || ||||| ||||||||||||||||||||||||||||||  ||||||    
T  33362591 tttgcgggtaattaccct-acccgtgcccatatccatgaaagcggggttttatcctacccattgtgggtattttttgcgggtatccatcgagtctgggtc 33362493  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||||||||    
T  33362492 caattgccatcccta 33362478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 7 - 214
Target Start/End: Original strand, 38491727 - 38491935
Alignment:
Q  7 aaataaattatttatgatattatacaaatatgtatatgcggggttgcg-ggctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtg 105  Q
    |||||||||| |||| |||||| | |||||| |||||||||||||||  ||||||||| ||||||||| ||||||||||||||||||||||||||| |||    
T  38491727 aaataaattacttataatattaaataaatatatatatgcggggttgcatggctgggcagtatagtacccttacccgtgcccatatccatttaaattcgtg 38491826  T
Q  106 ggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgt 205  Q
    |||||||||| || || |||||| | |||||| |   ||| ||||||| ||||| |||||||||||| ||||||||||||| | |  ||||||||||||     
T  38491827 ggtattacccggacccttccccatacccatgatagtagggttttaccctacccattgtgggtattttatgcgggtatccattgggtatgggtccaattgc 38491926  T
Q  206 catccctat 214  Q
    |||| ||||    
T  38491927 catcgctat 38491935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 48964175 - 48963995
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||| ||||||||| ||||||||     
T  48964175 aaaaataaataaataatttatgatattatataaatatgtatatgcggggttgcgggtctgggcagtatagtacccttacctgtgcccatacccatttaat 48964076  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccat 186  Q
    ||||||||||||||      |||| |||||| |||| ||| ||||| ||||||| ||||  ||||| ||||||||||||||| ||||    
T  48964075 tttgtgggtattac------ccgtgcccagacccataaaagcggggttttaccctaccctttgtggatattttttgcgggtacccat 48963995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 19996477 - 19996278
Alignment:
Q  11 aaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggtat 110  Q
    |||||| ||||||||||| | |||||||||||||||||||||||||||| ||| ||||||||  ||||||||| ||||| |||||||||||||||||||     
T  19996477 aaattacttatgatattaaataaatatgtatatgcggggttgcgggctgagcagtatagtactcttacccgtgtccatacccatttaaatttgtgggtaa 19996378  T
Q  111 tacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcc 210  Q
    |||||  | ||||||||||| |||||| | ||| | ||||||| ||||| | ||  |||||| | ||||||| ||| |||| |||||||||||| |||||    
T  19996377 tacccgaacccgtccccagacccatgatagcggagttttaccctacccattatgaatattttatacgggtattcattgagcatgggtccaattgccatcc 19996278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 25815132 - 25814954
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||        ||||||| ||||||||| ||||||||| ||||| |||||||| |    
T  25815132 aaaaataaataaataatttatgatattatataaatatgtatatgcgggt-------ctgggcagtatagtacccttacccgtgtccatacccatttaatt 25815040  T
Q  101 ttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccat 186  Q
    |||||||||||||||  | |||| |||||| |||| ||| ||||| ||||||| ||||| ||||| ||||||||||||||||||||    
T  25815039 ttgtgggtattacccgtacccgtacccagacccataaaagcggggttttaccctacccattgtggatattttttgcgggtatccat 25814954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 7 - 186
Target Start/End: Original strand, 424874 - 425054
Alignment:
Q  7 aaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtg 105  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||||| |   ||||||| ||||||||| |||||||||||||||||||||||| ||||||    
T  424874 aaataaataatttatgatattatataaatatgtataagcggggttgtgcctctgggcagtatagtacccttacccgtgcccatatccatttaattttgtg 424973  T
Q  106 ggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccat 186  Q
    |||||||||| || |||| |||||| |||| |||  |||  ||||||| || || ||||| |||||||| |||||| ||||    
T  424974 ggtattacccggacccgtacccagacccataaaagtgggattttaccctactcattgtggatattttttacgggtacccat 425054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 18 - 213
Target Start/End: Complemental strand, 43634327 - 43634132
Alignment:
Q  18 ttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggtattaccca 116  Q
    ||||||||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||     
T  43634327 ttatgatattatataaatatgtatatgcggggttgcgggtctaggcagtatagtacccttacccgtgcccatatccatttaattttgtgggtattacccg 43634228  T
Q  117 gatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
     | ||||  ||||| | || ||| ||| | |||||||  || | |||||||||||||||| ||||||||| |    |||||||||||| ||||||||    
T  43634227 tacccgtgtccagacctataaaagcggagttttaccctgcctaatgtgggtattttttgc-ggtatccattggatctgggtccaattgccatcccta 43634132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 33794214 - 33794012
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||  |||||| ||||||||  |||||||||||| || ||||||||     
T  33794214 aaaaataaataaataatttatgatattatataaatatgtatatgcggggttgcgggtttgggcagtatagtactcttacccgtgccc-tacccatttaat 33794116  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||      |||| |||| | |||| ||| ||| | ||||||| | ||| ||||||||||||| ||||||| |||| | |  |||||||    
T  33794115 tttgtgggtattac------ccgtgcccatacccataaaagcggagttttaccctatccattgtgggtatttttggcgggtacccattgggtctgggtcc 33794022  T
Q  200 aattgtcatc 209  Q
    ||||||||||    
T  33794021 aattgtcatc 33794012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 2975054 - 2974841
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||  |||||||||| | |||||||||||||||||||| |||| |||| || |||||||| |||||||||||||||| ||||| |||    
T  2975054 aaaaataaataaattacatatgatattaaataaatatgtatatgcggggttacggggctggacagtatagtacatttacccgtgcccatacccattaaaa 2974955  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    || ||| ||||||||| || ||||||||| | | |||| ||||||  ||||| | ||||| | ||  |||||| ||||||||||||| |  | || ||||    
T  2974954 ttcgtgtgtattacccggacccgtccccaaacctatgataacgggattttacgctacccattatgaatattttatgcgggtatccattggacctgagtcc 2974855  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  2974854 aattgccatcccta 2974841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 2433512 - 2433724
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||| |||||||  |||||||| |||||| ||||||| |||||||||| ||||| | |||| |||| ||||||||||||||| ||||   ||    
T  2433512 aaaaataaataa-ttatttaaaatattatataaatatatatatgcagggttgcgggcctgggtagtataatacccttacccgtgcccatacccataacaa 2433610  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||| || || || |  ||| |  ||||||||||||  |||| || ||||| |||||||||||||||||||||||||| | |  ||| |||    
T  2433611 tttgtgggtattatccggacccatgtccatactcatgaaaacgggattttatcctacccattgtgggtattttttgcgggtatccattgggtctggatcc 2433710  T
Q  200 aattgtcatcccta 213  Q
    ||||||||||||||    
T  2433711 aattgtcatcccta 2433724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 213
Target Start/End: Original strand, 7842865 - 7843068
Alignment:
Q  11 aaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggta 109  Q
    |||||| ||||||||||| | |||||||||||||||| |||||||| ||| ||| ||||||||| |||| |||||||| ||||||||||||| |||||||    
T  7842865 aaattacttatgatattaaataaatatgtatatgcggtgttgcggggctgagcagtatagtacccttactcgtgcccaaatccatttaaattcgtgggta 7842964  T
Q  110 ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatc 209  Q
    ||| |   | |||||| |||| |||||| |  | || ||||||| ||||| | || ||||||| ||||||||||||| || | || ||||||||| ||||    
T  7842965 ttatctgaacccgtcctcagacccatgatagtgaggttttaccctacccattatgagtattttgtgcgggtatccattgaacatgagtccaattgccatc 7843064  T
Q  210 ccta 213  Q
    ||||    
T  7843065 ccta 7843068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 23 - 213
Target Start/End: Original strand, 27783823 - 27784013
Alignment:
Q  23 atattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggtattacccagatcc 121  Q
    |||||||| ||||||||||||||||| ||||||| ||||| | ||||||||| |||||||||||| || |||||||| ||||||||||||||||  | ||    
T  27783823 atattatataaatatgtatatgcggg-ttgcgggtctgggtagtatagtacccttacccgtgcccgtacccatttaattttgtgggtattacccgtaccc 27783921  T
Q  122 gtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
     |  ||| |||||| ||| ||||| ||||||| ||||| ||||| ||||||||| |||||||||| |    |||||||||||| ||||||||    
T  27783922 atgtccaaatccataaaagcggggttttaccctacccattgtggatattttttgtgggtatccattggatctgggtccaattgccatcccta 27784013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 20415281 - 20415492
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||| ||||| ||||||| |||||||| ||||||||| ||   |||||||||| ||||| | ||||||||| ||||||||| ||||| ||||| |||    
T  20415281 aaaaatatataaagtatttattatattatataaatatgtacatc--gggttgcggggctgggtagtatagtacccttacccgtgtccatacccattaaaa 20415378  T
Q  100 tttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| ||||| ||||||  | |||| |||| | |||||||| ||||| ||||||| ||||| ||||||||||||||||||||  ||||||    ||||||    
T  20415379 tttgcgggtaattaccct-acccgtgcccatacccatgaaagcggggttttaccctacccattgtgggtattttttgcgggtgcccatcggatctgggtc 20415477  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||||||||    
T  20415478 caattgccatcccta 20415492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 3191892 - 3191784
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    ||||||||||||| ||||||| |||||||| ||||||||||||||||| ||  || ||||| | ||||||||| ||||||| ||||||||||||| ||||    
T  3191892 aaaaataaataaaatatttattatattatataaatatgtatatgcgggttttaggtctgggtagtatagtacccttacccgcgcccatatccattaaaat 3191793  T
Q  101 ttgtgggta 109  Q
    ||| |||||    
T  3191792 ttgcgggta 3191784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 3200710 - 3200602
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    ||||||||||||| ||||||| |||||||| ||||||||||||||||| ||  || ||||| | ||||||||| ||||||| ||||||||||||| ||||    
T  3200710 aaaaataaataaaatatttattatattatataaatatgtatatgcgggttttaggtctgggtagtatagtacccttacccgcgcccatatccattaaaat 3200611  T
Q  101 ttgtgggta 109  Q
    ||| |||||    
T  3200610 ttgcgggta 3200602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 3209547 - 3209439
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    ||||||||||||| ||||||| |||||||| ||||||||||||||||| ||  || ||||| | ||||||||| ||||||| ||||||||||||| ||||    
T  3209547 aaaaataaataaaatatttattatattatataaatatgtatatgcgggttttaggtctgggtagtatagtacccttacccgcgcccatatccattaaaat 3209448  T
Q  101 ttgtgggta 109  Q
    ||| |||||    
T  3209447 ttgcgggta 3209439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 30489961 - 30490174
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctg-ggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||  |||||||| ||||||||||||||||| ||||||| |  || ||||||||| | |||||||   ||||| |||| ||||    
T  30489961 aaaaataaataaaatatttagtatattatataaatatgtatatgcggg-ttgcggggttaggtaatatagtatccttacccgcatccatacccatctaaa 30490059  T
Q  100 tttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| ||||| |||||| || ||   |||| | |||| ||| ||||| ||||||| ||| | ||||||||||||||||||||  ||||||| | ||||||    
T  30490060 tttgcgggtaattacccggacccaagcccatacccataaaagcgggg-tttaccctacctattgtgggtattttttgcgggtgcccatcgaacctgggtc 30490158  T
Q  199 caattgtcatccctat 214  Q
    |||||| |||||||||    
T  30490159 caattgccatccctat 30490174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 12560423 - 12560329
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcg-ggctgggcaatatagtacctttacccgtgcccatatccat 94  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||| ||||||||| ||||  |||| |||||||||    
T  12560423 aaaaataaataaataatttatgatattatataaatatgtatatgcggggttgcgagtctgggcagtatagtacccttacttgtgctcatatccat 12560329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 10786501 - 10786713
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||| ||| |||||||| |||||||||||| | ||||||| ||| ||| || ||||||||| |||||||| ||| ||   ||| |||    
T  10786501 aaaaataaataaattatctatcatattatataaatatgtatatac-gggttgcggggttggacagtatagtacccttacccgtacccttacttattcaaa 10786599  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    |||   |||| |||||||| || | ||||||  ||||||| | | ||||||||| ||||| ||  ||||||| ||||||||| ||||||  | |||||||    
T  10786600 tttacaggtaatacccagacccatacccagactcatgaaagcagagctttaccctacccattgcaggtatttgttgcgggtacccatcggacctgggtcc 10786699  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  10786700 aattgccatcccta 10786713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 17 - 214
Target Start/End: Original strand, 611037 - 611235
Alignment:
Q  17 tttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggtattaccc 115  Q
    ||||| |||||||| ||||||||||||||||||||||||| ||||| | ||||||| | ||| || |  ||||| ||||||||||||  ||||| |||||    
T  611037 tttataatattatataaatatgtatatgcggggttgcgggactgggtagtatagtatccttatccatatccatacccatttaaatttacgggtactaccc 611136  T
Q  116 agatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatccctat 214  Q
     || |||| |||| |||||||||| ||| | ||||| | ||||| | | | |||||||| || |||||  |||||  ||| |||||||| |||||||||    
T  611137 ggacccgtgcccatatccatgaaagcggagttttactctacccattatagatattttttccgagtatctgtcgagtctggatccaattgccatccctat 611235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 32133819 - 32134032
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||  ||||||| |||||||| | || ||| ||  |||||||||||||| |||  ||||    
T  32133819 aaaaataaataaattatttataatattatataaatacatatatg-tgggttgcagggctgggtagtacagtgcccatacccgtgcccatacccaaataaa 32133917  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| |||| |||||||| | ||    || || |||||||| ||||| ||||||| ||||| || || ||||||||||||||  |||| | |  ||||||    
T  32133918 tttgcgggtaattacccatacccaagtccggacccatgaaagcggggttttaccctacccattgcggatattttttgcgggtgcccatagggtctgggtc 32134017  T
Q  199 caattgtcatcccta 213  Q
    |||||||||||||||    
T  32134018 caattgtcatcccta 32134032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 7815202 - 7815414
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||| |||||| ||||||| |||||||| |||||||||||||| ||||||| |||||||| | ||||||| | |||||||  |||||| ||| ||||     
T  7815202 aaaaattaataaaatatttattatattatataaatatgtatatgc-gggttgcggggctgggaagtatagtatccttacccgcacccataccca-ttaag 7815299  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    |||| ||  ||||||| || ||   | || |||||| ||| ||| | ||||||| ||||| ||  ||||||||||||| || ||||| | |  |||||||    
T  7815300 tttgcggtaattacccggacccaaactcatatccataaaagcggagttttaccctacccattgcaggtattttttgcgagtgtccattgggtctgggtcc 7815399  T
Q  200 aattgtcatccctat 214  Q
    |||||||||||||||    
T  7815400 aattgtcatccctat 7815414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 28192249 - 28192036
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||||||| |||||||| |||||  |||||||||| |||| |||||||| | || ||| ||  |||| || |||||| |||| ||||    
T  28192249 aaaaataaataaattatttataatattatataaatacatatatgcggg-ttgcagggctgggtagtacagtgcccatacctgtacccatacccatataaa 28192151  T
Q  100 tttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||  ||||| ||| ||| | ||    || || |||||||| ||||| ||||||| |||||  ||||||||||||||||||| ||||| | |  ||||||    
T  28192150 tttacgggtaattatccatacccaagtccggacccatgaaagcggggttttaccctacccatagtgggtattttttgcgggtgtccatagggtctgggtc 28192051  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||||||||    
T  28192050 caattgccatcccta 28192036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29512029 - 29511973
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggc 57  Q
    ||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||    
T  29512029 aaaaataaataaattatttatgatattatattaatatgcatatgcggggttgcgggc 29511973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 13796879 - 13796766
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||| |||||||  |||||||| |||||||||||||||||||||| |||||  | | ||||||||| ||||||||||||||| ||||   |     
T  13796879 aaaaataaataa-ttatttaaaatattatataaatatgtatatgcggggttgcggggctttgtagtatagtacc-ttacccgtgcccatacccataacag 13796782  T
Q  100 tttgtgggtattaccc 115  Q
    ||||||||||||||||    
T  13796781 tttgtgggtattaccc 13796766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 14106613 - 14106826
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||  |||||||| ||||||| ||||| ||| ||||||| ||||  | ||||||||| ||| |||  |||||| ||||| |||    
T  14106613 aaaaataaataaagtatttaatatattatataaatatgcatatgtggg-ttgcggggctggatagtatagtacccttatccgcacccatacccattaaaa 14106711  T
Q  100 tttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| ||||| |||||| || ||   |||| |  ||||||| ||||| ||||||| ||||| || |||  |||||||||||| ||||| |  | ||||||    
T  14106712 tttgcgggtaattacccggacccaagcccatactcatgaaagcggggttttaccctacccattgcggggtttttttgcgggtgtccataggacctgggtc 14106811  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||||||||    
T  14106812 caattgccatcccta 14106826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 212
Target Start/End: Complemental strand, 29425999 - 29425790
Alignment:
Q  4 aataaataaattatttatgatattatacaaatatgtatatgcggggttgcgg-gctgggcaatatagtacctttacccgtgcccatatccatttaaattt 102  Q
    |||| ||||||||||||| |||||||| ||| |  |||||| ||| |||||| |||||| | |||||| ||  ||||||||||| || || ||||| |||    
T  29425999 aatatataaattatttattatattatataaaaacatatatgtggg-ttgcggagctgggtagtatagtgcccatacccgtgcccgtacccttttaagttt 29425901  T
Q  103 gtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaa 201  Q
    |  |||| |||||| || || | |||| ||| |||||| ||||| ||||||| | ||| || ||||||||||||||||| ||||||| || | |||| ||    
T  29425900 gcaggtaattacccggagccatgcccatatctatgaaagcggggttttaccctatccattgcgggtattttttgcgggtgtccatcgggccttggtctaa 29425801  T
Q  202 ttgtcatccct 212  Q
    ||| |||||||    
T  29425800 ttgccatccct 29425790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 35659840 - 35659944
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    |||||||||||||| |||||| |||||||| ||||||||| |||||||||       ||| || ||||  ||| ||| ||||||||||||| ||||||||    
T  35659840 aaaaataaataaataatttatcatattatataaatatgtacatgcggggt-------tggacagtataacacccttatccgtgcccatatctatttaaat 35659932  T
Q  101 ttgtgggtatta 112  Q
    ||||||||||||    
T  35659933 ttgtgggtatta 35659944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 8981373 - 8981267
Alignment:
Q  3 aaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatt 101  Q
    ||||||| ||||||||||  |||||||| |||||  ||||||| || ||||||| ||||| |||| ||| ||  |||||||||||||||||||| |||||    
T  8981373 aaataaacaaattatttagcatattatataaatacatatatgcagg-ttgcggggctgggtaatacagttcccatacccgtgcccatatccattcaaatt 8981275  T
Q  102 tgtgggta 109  Q
    ||||||||    
T  8981274 tgtgggta 8981267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 213
Target Start/End: Complemental strand, 40094069 - 40093859
Alignment:
Q  4 aataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaattt 102  Q
    |||| ||||||||||||| |||||||| |||||  ||| ||| ||||||| ||| |||| | |||||| ||  |||||||| || ||||| ||||| |||    
T  40094069 aatatataaattatttattatattatataaatacatatgtgc-gggttgcggggatgggtagtatagtgcccatacccgtgtccgtatccttttaagttt 40093971  T
Q  103 gtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaa 201  Q
    | || | |||||||  | || | |||| | |||||||| ||||| ||||||| ||||| || ||||| ||||||||| ||||||||| || |||||| ||    
T  40093970 gcggataattacccgaacccatgcccatacccatgaaagcggggatttaccctacccattgcgggtaatttttgcggatatccatcgggcctgggtctaa 40093871  T
Q  202 ttgtcatcccta 213  Q
    | | ||||||||    
T  40093870 tggccatcccta 40093859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 2465387 - 2465270
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcg-ggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||| ||||||||||| |||||||| || ||||||||||| |||||| | || |||||| ||||||||| ||||  || | |||| |||||||||    
T  2465387 aaaaataaacaaattatttatcatattatataactatgtatatgc-gggttgtgtggatgggcagtatagtaccattacttgtactcatacccatttaaa 2465289  T
Q  100 tttgtgggtattacccaga 118  Q
    |||| | ||| ||||||||    
T  2465288 tttgcgagtaatacccaga 2465270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 22579952 - 22579880
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacc 73  Q
    |||||| |||||||||||||| |||| ||| |||||||||||||| ||||||| |||||||||| |||||||||    
T  22579952 aaaaattaataaattatttatcatataatataaatatgtatatgc-gggttgcggggctgggcagtatagtacc 22579880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 31107461 - 31107353
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||  |||||| || |||| || |||| |||| ||||| | || || | |||||||||    
T  31107461 aaaaataaataaattatttattatattgtataaatatgtatatgc-aggttgcaggactggacattataatacccttacctgcgcacaaacccatttaaa 31107363  T
Q  100 tttgtgggta 109  Q
    ||||||||||    
T  31107362 tttgtgggta 31107353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 16176805 - 16176758
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggg 48  Q
    ||||||||||||| ||||||| |||||||| |||||||||||||||||    
T  16176805 aaaaataaataaaatatttattatattatataaatatgtatatgcggg 16176758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 46772212 - 46772110
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||  |||||||||||||| ||||||| |||||||| | |||||| || ||||||   |||||| |||| ||||    
T  46772212 aaaaataaataaaatatttattatattatctaaatatgtatatgc-gggttgcggggctgggtagtatagtgcccttacccacacccatacccatctaaa 46772114  T
Q  100 tttg 103  Q
    ||||    
T  46772113 tttg 46772110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 213
Target Start/End: Original strand, 39027147 - 39027285
Alignment:
Q  76 tacccgtgcccatatccatttaaatttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtatttttt 174  Q
    |||||||||||||| |||| |||||||| | ||| ||||||| | ||    || || |||||||| ||||| ||||||| |||||  | |||||||||||    
T  39027147 tacccgtgcccatacccatataaatttgcgagtaattacccatacccaagtccggacccatgaaagcggggttttaccctacccatagcgggtatttttt 39027246  T
Q  175 gcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
    ||||||  |||| |||  |||||||||||| ||||||||    
T  39027247 gcgggtgcccatagagtctgggtccaattgccatcccta 39027285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 213
Target Start/End: Complemental strand, 29511944 - 29511828
Alignment:
Q  97 aaatttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttggg 196  Q
    ||||||||||||||||||  ||||||| |||  |||||| |||   ||  ||||||| | ||| |||||||||||||||||||| || ||||| | |||     
T  29511944 aaatttgtgggtattacctggatccgtgcccgaatccataaaagtaggattttaccctaaccattgtgggtattttttgcgggtctctatcgaacctgga 29511845  T
Q  197 tccaattgtcatcccta 213  Q
    || ||||| ||||||||    
T  29511844 tctaattgacatcccta 29511828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 47665694 - 47665741
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggg 48  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||||||    
T  47665694 aaaaataaataaattatttataatattatataaatacatatatgcggg 47665741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3821092 - 3821050
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatat 43  Q
    ||||||||||||||||||||| |||||||| ||||||| ||||    
T  3821092 aaaaataaataaattatttatcatattatataaatatgcatat 3821050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34321339 - 34321383
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgc 45  Q
    |||||| |||||| ||||||| |||||||| ||||||||||||||    
T  34321339 aaaaattaataaaatatttattatattatataaatatgtatatgc 34321383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 48874931 - 48874879
Alignment:
Q  163 tgggtattttttgcgggtatccatcgagcttgggtccaattgtcatccctatc 215  Q
    ||||||||||||||  ||  ||||||| | |||||||||||||||||||||||    
T  48874931 tgggtattttttgcaagtgcccatcgaacatgggtccaattgtcatccctatc 48874879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 5e-60; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 52180574 - 52180361
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||  |||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  52180574 aaaaataaataaataatttatgatattatataaatatgtatatgcgggtatgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 52180475  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | || | ||||||||||| ||| ||||| ||||||| ||||| |||||||||||||||||||||||||| | |  |||||||    
T  52180474 tttgtgggtattacccgtacccatgcccagatccataaaagcggggttttaccctacccattgtgggtattttttgcgggtatccattgggtctgggtcc 52180375  T
Q  200 aattgtcatcccta 213  Q
    ||||||||||||||    
T  52180374 aattgtcatcccta 52180361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 23147715 - 23147925
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||  |||||| ||||||| ||||||||||||||||||||||||| ||||||||     
T  23147715 aaaaataaataaataatttatgatattatataaatatgtatatgcgggtctgcgggtctgggcagtatagtacctttacccgtgcccatacccatttaat 23147814  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | |||| || |||||||| ||| ||||| ||||||| ||||| ||||| |||||||||||||||||||| | | ||||||||    
T  23147815 tttgtgggtattacccgtacccgtgcctagatccataaaagcggggttttaccctacccattgtggatattttttgcgggtatccattgggtttgggtcc 23147914  T
Q  200 aattgtcatcc 210  Q
    ||||| |||||    
T  23147915 aattgccatcc 23147925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 29148816 - 29148602
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||  |||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  29148816 aaaaataaataaataatttatgatattatataaatatgtatatgcgggtatgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 29148717  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | |||| |||||| |||| ||| ||||| ||||||| ||||| |||||||||||||||||||||||||| | |  |||||||    
T  29148716 tttgtgggtattacccgtacccgtgcccagacccataaaagcggggttttaccctacccattgtgggtattttttgcgggtatccattgggtctgggtcc 29148617  T
Q  200 aattgtcatccctat 214  Q
    ||||| |||||||||    
T  29148616 aattgccatccctat 29148602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 32655319 - 32655106
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||  |||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  32655319 aaaaataaataaataatttatgatattatataaatatgtatatgcgggtatgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 32655220  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | |||| ||||||||||| ||| ||||| ||||||| | ||| |||||||||||||||||||||||||| | |  |||||||    
T  32655219 tttgtgggtattacccgtacccgtgcccagatccataaaagcggggttttaccctatccattgtgggtattttttgcgggtatccattgggtctgggtcc 32655120  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  32655119 aattgccatcccta 32655106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 42755651 - 42755837
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||||||||||| ||||||| |||| |||| ||||||||||||||| ||||||||     
T  42755651 aaaaataaataaataatttatgatactatataaatatgtatatgcggggttgcgggtctgggcagtataatacccttacccgtgcccatacccatttaat 42755750  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccat 186  Q
    ||||||||||||||||  | |||| ||||||||||| ||| ||||| ||||||| ||||| ||||||||||||||||||||||||||    
T  42755751 tttgtgggtattacccgtacccgtgcccagatccataaaagcggggttttaccctacccattgtgggtattttttgcgggtatccat 42755837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 42053067 - 42052854
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||  |||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  42053067 aaaaataaataaataatttatgatattatataaatatgtatatgcgggtatgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 42052968  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | |||| |||||| |||| ||| ||||| ||||||| ||||| |||||||||||||||||||||||||| | |  ||||| |    
T  42052967 tttgtgggtattacccgtacccgtgcccagacccataaaagcggggttttaccctacccattgtgggtattttttgcgggtatccattgggtctgggttc 42052868  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  42052867 aattgccatcccta 42052854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 33983447 - 33983657
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| ||||||||||| | ||||||||||||||||||||| ||| ||||||| ||||||||| |||||||||| |||| |||||||||    
T  33983447 aaaaataaataaattacttatgatattaaataaatatgtatatgcggggttgtggggctgggcagtatagtacccttacccgtgctcatacccatttaaa 33983546  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    |||||||||||||||| || ||||||| |||||||||| | ||| | |||| || ||||| ||| |||||||| ||||||||||||| | || |||||||    
T  33983547 tttgtgggtattacccggacccgtccctagatccatgatagcggagttttatcctacccattgtaggtattttatgcgggtatccattgggcctgggtcc 33983646  T
Q  200 aattgtcatcc 210  Q
    ||||| |||||    
T  33983647 aattgccatcc 33983657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 34459431 - 34459218
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| ||||||||||| | ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| ||||| |||    
T  34459431 aaaaataaataaattacttatgatattaaataaatatgtatatgcggggttgcggggctgggcagtatagtacccttacccgtgcccatacccattaaaa 34459332  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    || ||||||||||||| || ||||||||| | |||||| | ||| | ||||||| ||| | |||||||||||| ||||||||||||| |  | |||||||    
T  34459331 ttcgtgggtattacccggacccgtccccatacccatgatagcggtgttttaccctaccaattgtgggtattttatgcgggtatccattggacctgggtcc 34459232  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  34459231 aattgccatcccta 34459218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 5 - 210
Target Start/End: Original strand, 21076140 - 21076346
Alignment:
Q  5 ataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttg 103  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||| |||||||| ||||    
T  21076140 ataaataaataatttatgatattatataaatatgtatatgcggggttgcgggtctgggcaatatagtatccttacccgtgcccatacccatttaattttg 21076239  T
Q  104 tgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaatt 203  Q
    ||||||||||||  | |||| |||||| |||| ||| ||||| ||||||| | ||| ||||| ||||||||||||||| |||| | |  |||||||||||    
T  21076240 tgggtattacccgtacccgtgcccagacccataaaagcggggttttaccctatccattgtggatattttttgcgggtacccattgggtctgggtccaatt 21076339  T
Q  204 gtcatcc 210  Q
    | |||||    
T  21076340 gccatcc 21076346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 38000906 - 38001119
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||| |||||||||||||||| ||||||| ||||||||| |||| |||||||||||||||||||     
T  38000906 aaaaataaataaataatttatgatattatataaatatgtgtatgcggggttgcgggtctgggcagtatagtacccttactcgtgcccatatccatttaat 38001005  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | |||| |||| | |||| ||||||||| ||||||| ||||| | | ||||||||||||| ||| |||| | |  |||||||    
T  38001006 tttgtgggtattacccgtacccgtgcccatacccataaaaacggggttttaccctacccattataggtattttttgcgagtacccattgggtctgggtcc 38001105  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  38001106 aattgccatcccta 38001119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 652545 - 652758
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||| ||| ||||||||||||||| |||||||||||||||||||||| || ||||||| |||| |||| ||||||||||||||| ||||||||     
T  652545 aaaaataaatgaataatttatgatattatataaatatgtatatgcggggttgcaggtctgggcagtataatacccttacccgtgcccatacccatttaat 652644  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | | || |||||| |||| |||  |||| ||||||| || || |||||||||||||||||||||||||| | |  |||||||    
T  652645 tttgtgggtattacccgtacctgtgcccagacccataaaagaggggttttaccctacacattgtgggtattttttgcgggtatccattgggtctgggtcc 652744  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  652745 aattgccatcccta 652758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 3094777 - 3094564
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  3094777 aaaaagaaataaataatttatgatattatataaatatgtatatgcggggttgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 3094678  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    |||||||||||||| |  |  ||| |||||| |||| ||| ||||| |||||||  |||| ||||||||||||||||||||| |||| | |  ||||| |    
T  3094677 tttgtgggtattactcgtactcgtgcccagacccataaaagcggggttttacccttcccattgtgggtattttttgcgggtacccattgggtctgggttc 3094578  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  3094577 aattgccatcccta 3094564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 53140934 - 53141148
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| ||||||| ||||||| ||||| | ||||||||| ||||||||| ||||| ||||| |||    
T  53140934 aaaaataaataaagtatttattatattatataaatatgtacatgcggg-ttgcggggctgggtagtatagtacccttacccgtgtccatacccattaaaa 53141032  T
Q  100 tttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| ||||| ||||||  | |||| |||| |||||||||| ||||| ||||||| ||||| ||||||||||||||||||||||||||||||  ||||||    
T  53141033 tttgcgggtaattaccct-acccgtgcccatatccatgaaagcggggttttaccctacccattgtgggtattttttgcgggtatccatcgagtctgggtc 53141131  T
Q  199 caattgtcatccctatc 215  Q
    |||||| ||||||||||    
T  53141132 caattgccatccctatc 53141148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 52595855 - 52596067
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||  || ||| ||||||| ||||||||| ||||||||||||||| |||||| |     
T  52595855 aaaaataaataaataatttatgatattatataaatatgtatatgcgggtctgagggtctgggcagtatagtacccttacccgtgcccatacccattttat 52595954  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | |||| |||||||| || ||| ||||| ||||||| | | | |||| ||||||||||||||||||||| |    |||||||    
T  52595955 tttgtgggtattacccgtacccgtgcccagatctataaaagcggggttttaccctatctattgtgagtattttttgcgggtatccattggatctgggtcc 52596054  T
Q  200 aattgtcatccct 212  Q
    ||||| |||||||    
T  52596055 aattgccatccct 52596067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 1730851 - 1730637
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| |||| |||||| | ||||||||||||||||||||||||| ||||||| ||||||||  ||||| || ||||| |||| |||||    
T  1730851 aaaaataaataaattacttataatattaaataaatatgtatatgcggggttgcggggctgggcagtatagtactcttacctgtacccatctccaattaaa 1730752  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    || |||||||||||||  | ||||| | |||||||||| | ||||| ||||||| ||||| |||||||||||| || || ||||||| |||| || || |    
T  1730751 ttcgtgggtattacccgaacccgtctc-agatccatgatagcggggttttaccctacccattgtgggtattttatgtggatatccattgagcctgagtgc 1730653  T
Q  200 aattgtcatccctatc 215  Q
    ||||||||||||||||    
T  1730652 aattgtcatccctatc 1730637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 213
Target Start/End: Complemental strand, 28928403 - 28928207
Alignment:
Q  18 ttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggtattaccca 116  Q
    ||||||||||| | |||||||||||||| |||||||||| ||| ||| ||||||||| ||||||||||||||| ||||||||||| |||||||||||||     
T  28928403 ttatgatattaaataaatatgtatatgcagggttgcgggactgtgcagtatagtacccttacccgtgcccatacccatttaaattcgtgggtattacccg 28928304  T
Q  117 gatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
    |||| ||||||| | |||| | | ||||| ||||||| ||||| ||||| |||||| ||||||||||||| | || || | ||||||| ||||||||    
T  28928303 gatctgtccccaaacccataatagcggggttttaccctacccattgtggatattttatgcgggtatccattgggcatgtgcccaattgccatcccta 28928207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 25938675 - 25938881
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||        ||||||| ||||||||| ||||||||||||||| |||||||| |    
T  25938675 aaaaataaataaataatttatgatattatataaatatgtatatgcgggt-------ctgggcagtatagtacccttacccgtgcccatacccatttaatt 25938767  T
Q  101 ttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcca 200  Q
    |||||||||||||||  | ||||  ||||| |||| ||| ||| | ||||||| ||||| ||||||||||||||  |||||||||| ||   ||||||||    
T  25938768 ttgtgggtattacccgtacccgtgtccagacccataaaagcggagttttaccctacccattgtgggtattttttatgggtatccattgaatctgggtcca 25938867  T
Q  201 attgtcatccctat 214  Q
    |||| |||||||||    
T  25938868 attgccatccctat 25938881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 2073426 - 2073272
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggc-tgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||  || ||||||| | |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||| |||||||||    
T  2073426 aaaaataaataaattacctaagatattaaataaatatgtatatgcggggttgcgggcctgggcagtatagtacccttacccgtgcccatacccatttaaa 2073327  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttaccca 154  Q
    |||||||||||||||| || || |||| ||| |||||| | ||||| ||||||||    
T  2073326 tttgtgggtattacccggacccctccctagacccatgatagcggggttttaccca 2073272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 8066268 - 8066453
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||| ||||||| |||| |||| |||||||||||| ||||||||||||||| |||||||      
T  8066268 aaaaataaataaataatttatgatattatataaatatgtatatacggggttacgggtctggacaatatagtacccttacccgtgcccatacccatttagt 8066367  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccat 186  Q
    ||||||||||||||||  | |||| | |||| |||| ||| ||||  ||||||| | ||| ||||||||||||||||||||| ||||    
T  8066368 tttgtgggtattacccgtacccgtgctcagacccat-aaagcgggattttaccctatccattgtgggtattttttgcgggtacccat 8066453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 2224757 - 2224644
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| |||| |||     
T  2224757 aaaaataaataaataatttatgatattatataaatatgtatatgcggggttgcgggtctgggcagtatagtacccttacccgtgcccatacccatataat 2224658  T
Q  100 tttgtgggtattac 113  Q
    ||||||||||||||    
T  2224657 tttgtgggtattac 2224644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 21246149 - 21246352
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||| |||||| ||||||||||||||| |||| |||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||||||||||     
T  21246149 aaaaatagataaataatttatgatattatataaatttgtatatgcggggttgcgggtctggacaatatagtacccttacccgtgccaatatccatttaat 21246248  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    | ||||||||||| ||  | ||||  ||| | |||| ||| ||||  ||||||| ||||| |||||||||||||| |||||| |||| |  | |||||||    
T  21246249 tctgtgggtattatccgtacccgtgtccatacccataaaagcgggattttaccctacccattgtgggtatttttt-cgggtacccattggacctgggtcc 21246347  T
Q  200 aattg 204  Q
    |||||    
T  21246348 aattg 21246352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 7250388 - 7250189
Alignment:
Q  11 aaattatttatgatattatacaaatatgtatatgcggggttgcg-ggctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggta 109  Q
    |||||| |||| |||||| | |||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||    
T  7250388 aaattacttataatattaaataaatatatatatgcggggttgcgaggctgggcagtatagtacctttacccgtgcccatacccatttaaatttgtggata 7250289  T
Q  110 ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatc 209  Q
    |||||| || || |||||||| |||| | | ||||  ||||||| ||||| ||| | |||||| ||   ||||||||   || |||||||||||||||||    
T  7250288 ttacccggacccttccccagacccattatagcgggattttaccctacccattgtagatattttatgtaagtatccattaggcctgggtccaattgtcatc 7250189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 23 - 213
Target Start/End: Original strand, 12186106 - 12186296
Alignment:
Q  23 atattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggtattacccagatcc 121  Q
    |||||||| ||||||||||||||||| ||||||| ||||| ||||||||||| |||||||||||| || |||||||| ||||||||||||||||  | ||    
T  12186106 atattatataaatatgtatatgcggg-ttgcgggtctgggtaatatagtacccttacccgtgcccgtacccatttaattttgtgggtattacccgtaccc 12186204  T
Q  122 gtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
    ||  |||||||||| ||| ||||  ||||||| ||||| ||||| ||||||||| |||||||||| |    |||||||||||| ||||||||    
T  12186205 gtgtccagatccataaaagcgggtttttaccctacccattgtggatattttttgtgggtatccattggatctgggtccaattgccatcccta 12186296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 54932545 - 54932331
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| ||||||||||||| | ||||||| | ||||||| ||||||||  |||||||||||||| |||||||||     
T  54932545 aaaaataaataaataatttatgatattatataaatatgtatatgtgaggttgcgagtctgggcagtatagtactgttacccgtgcccatgtccatttaat 54932446  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | | || |||||| |||| ||| ||||  |||| || ||||| ||| ||||||||||| | ||| |||| |    |||||||    
T  54932445 tttgtgggtattacccgtaccagtgcccagacccataaaagcgggattttatcctacccattgtaggtattttttgagtgtacccattggatctgggtcc 54932346  T
Q  200 aattgtcatccctat 214  Q
    ||||| |||||||||    
T  54932345 aattgccatccctat 54932331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 41003633 - 41003842
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||  ||| |||| |||| ||||||||| ||||| ||||||||     
T  41003633 aaaaataaataaataatttatgatattatataaatatgtatatgcggggttgcgggtcttagcagtataatacccttacccgtgtccatacccatttaat 41003732  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggta-ttttttgcgggtatccatcgagcttgggtc 198  Q
    |||||||||||||| |  |  ||| |||||| |||| ||| ||||| ||||||  ||||| ||| |||| |||||||| |||||||||   |  ||||||    
T  41003733 tttgtgggtattactcgtactcgtgcccagacccataaaagcggggttttaccatacccattgtaggtatttttttgcaggtatccattaggtctgggtc 41003832  T
Q  199 caattgtcat 208  Q
    ||||||||||    
T  41003833 caattgtcat 41003842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 14577097 - 14577311
Alignment:
Q  1 aaaaataaataaattatttatgatat--tatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccattta 97  Q
    |||||||||||||| |||||||||||  |||| ||||||||||||||||| ||||||| ||||| | ||||||||| |||||||||||| || |||||||    
T  14577097 aaaaataaataaataatttatgatatattatataaatatgtatatgcggg-ttgcgggtctgggtagtatagtacccttacccgtgcccgtacccattta 14577195  T
Q  98 aatttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggt 197  Q
    | ||||||||||||||||  | ||||  |||||||||  ||| ||||  ||||||| | ||| ||||| ||||||||| |||||||||| |    |||||    
T  14577196 attttgtgggtattacccgtacccgtgtccagatccacaaaagcgggattttaccctatccattgtggatattttttgtgggtatccattggatctgggt 14577295  T
Q  198 ccaattgtcatcccta 213  Q
    ||||||| ||||||||    
T  14577296 ccaattgccatcccta 14577311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 1757830 - 1757619
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||| |||||||  |||||||| |||||||||||||||||||||| ||||| || | ||||||||| ||||||||||||||| ||||   ||    
T  1757830 aaaaataaataa-ttatttaaaatattatataaatatgtatatgcggggttgcggggctaggtagtatagtacccttacccgtgcccatacccataacaa 1757732  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||| || ||  |||  |||    ||||||| ||||| ||||||| ||||| | |||||||||||||| ||||||||| | |  |||||||    
T  1757731 tttgtgggtattatccggactcgtgtcca----catgaaagcggggttttaccctacccattatgggtattttttgcaggtatccattgggtctgggtcc 1757636  T
Q  200 aattgtcatccctatcc 216  Q
    ||||| |||||||||||    
T  1757635 aattgccatccctatcc 1757619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 3387012 - 3386813
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||        ||||||| ||||||||| ||||||||||||||| || ||||| |    
T  3387012 aaaaataaataaataatttatgatattatataaatatgtatatgcgggt-------ctgggcagtatagtacccttacccgtgcccatacccctttaatt 3386920  T
Q  101 ttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcca 200  Q
    | |||||||||||||      || |||  | |||| ||| ||||| ||||||| ||||| |||||||||||||||||||||||||| | | ||| |||||    
T  3386919 tagtgggtattaccc------gtgcccgaacccataaaagcggggttttaccctacccattgtgggtattttttgcgggtatccattgggtttgtgtcca 3386826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 22313156 - 22313038
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||||||||| ||||||| |  ||||||||| ||||||||| ||||| |||||||||    
T  22313156 aaaaataaataaattacttatgatattaaataaatatgtatatgcggggttgcggggctggacggtatagtacccttacccgtgtccatacccatttaaa 22313057  T
Q  100 tttgtgggtattacccaga 118  Q
    || ||||||||||||||||    
T  22313056 ttcgtgggtattacccaga 22313038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 23 - 213
Target Start/End: Complemental strand, 2721012 - 2720822
Alignment:
Q  23 atattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggtattacccagatcc 121  Q
    |||||||| ||||||||||||||||| ||||||| ||||| ||||||||||| |||||||||||| || |||||||| ||||||||||||||||  | ||    
T  2721012 atattatataaatatgtatatgcggg-ttgcgggtctgggtaatatagtacccttacccgtgcccgtacccatttaattttgtgggtattacccgtaccc 2720914  T
Q  122 gtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
        |||||||||| ||| ||||  ||||||| ||||| ||||| ||||||||| |||||||||| |    |||||||||||| ||||||||    
T  2720913 aagtccagatccataaaagcgggtttttaccctacccattgtggatattttttgtgggtatccattggatctgggtccaattgccatcccta 2720822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 12188100 - 12188263
Alignment:
Q  23 atattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggtattacccagatcc 121  Q
    |||||||| ||||||||||||||||| ||||||| ||||| ||||||||||| |||||||||||| || |||||||| ||||||||||||||||  | ||    
T  12188100 atattatataaatatgtatatgcggg-ttgcgggtctgggtaatatagtacccttacccgtgcccgtacccatttaattttgtgggtattacccgtaccc 12188198  T
Q  122 gtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccat 186  Q
        |||||||||| ||| ||||  ||||||| ||||| ||||| ||||||||| ||||||||||    
T  12188199 aagtccagatccataaaagcgggtttttaccctacccattgtggatattttttgtgggtatccat 12188263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 76 - 213
Target Start/End: Complemental strand, 52801936 - 52801799
Alignment:
Q  76 tacccgtgcccatatccatttaaatttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtatttttt 174  Q
    |||||||||||||| ||||| ||||||| ||||| ||||||  | |||| |||| |||||| ||| ||||| ||||||| ||||| ||||||||||||||    
T  52801936 tacccgtgcccatacccattaaaatttgcgggtaattaccct-acccgtgcccatatccataaaagcggggttttaccctacccattgtgggtatttttt 52801838  T
Q  175 gcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
    ||||||||||||||||  |||||||||||| ||||||||    
T  52801837 gcgggtatccatcgagtctgggtccaattgccatcccta 52801799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 46081042 - 46081253
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    ||||||||||||| ||||||| |||||||| ||||||||| |||| ||||||||||   || | |||| |||| ||||||||| ||||||||||| ||||    
T  46081042 aaaaataaataaagtatttattatattatataaatatgtacatgc-gggttgcggggctggtagtataatacccttacccgtgtccatatccattaaaat 46081140  T
Q  101 ttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||| | || |||||||  | |||| |||| | |||||||| ||||| ||||||| ||||| ||||| |||||||||||| |   ||||||   |||||||    
T  46081141 ttgcgcgtaattaccc-tacccgtgcccatacccatgaaagcggggttttaccctacccattgtggatattttttgcggatgctcatcgaatctgggtcc 46081239  T
Q  200 aattgtcatcccta 213  Q
    ||||||||||||||    
T  46081240 aattgtcatcccta 46081253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 22248184 - 22248392
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| |||| ||||||| |||||||| | ||||||||  ||| ||||| ||||| ||||| |||    
T  22248184 aaaaataaataaaatatttattatattatataaatatgtacatgc-gggttgcggggctgggtagtatagtactcttatccgtgtccatacccattaaaa 22248282  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| |||| |||||||  |||||| |||| |  ||||||| ||||| ||||| | ||||| |||||||| |||||||||||  |||||| |  ||||||    
T  22248283 tttgcgggtaattaccc-tatccgtacccatactcatgaaagcggggttttactctacccattgtgggta-tttttgcgggtgcccatcgggtctgggtc 22248380  T
Q  199 caattgtcatcc 210  Q
    |||||| |||||    
T  22248381 caattgccatcc 22248392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 54978934 - 54978777
Alignment:
Q  16 atttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggtattaccc 115  Q
    ||||||||||||||| ||||||||||||| |||        ||||||| |||| |||| ||||||||||||||| |||||||| ||||||||||||||||    
T  54978934 atttatgatattatataaatatgtatatgtgggt-------ctgggcagtataatacccttacccgtgcccatacccatttaattttgtgggtattaccc 54978842  T
Q  116 agatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggta 181  Q
      | | || |||||| |||| ||| ||||| |||| || ||||| |||||||||||||||||||||    
T  54978841 gtacctgtgcccagacccataaaagcggggtttta-cctacccattgtgggtattttttgcgggta 54978777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 46030514 - 46030724
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||| |||||||  |||||||||||||||||||| |||||||||| ||| |||| | ||||||||| ||||||||||| ||| ||||   ||    
T  46030514 aaaaataaataa-ttatttaaaatattatacaaatatgtatacgcggggttgcggggttgggtagtatagtacccttacccgtgcctatacccataacaa 46030612  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    |||||||||||||  | || |||| |||| |||||| ||| ||| | |||||   | | | ||||||| ||||| |||||||||||| ||   |||||||    
T  46030613 tttgtgggtatta--cggacccgtacccatatccataaaagcggagttttacattatctattgtgggtttttttagcgggtatccattgaatctgggtcc 46030710  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  46030711 aattgccatcccta 46030724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 29405666 - 29405455
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| ||| ||| |||| |||||||| | ||||||||  ||||||||| ||||||||||| |||    
T  29405666 aaaaataaataaagtatttattatattatataaatatgtacatgtggg-ttgcagggctgggtagtatagtactcttacccgtgtccatatccattaaaa 29405568  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| |||| |||||||  | |||| |||| | |||||||| ||| | |||| || ||| | | ||||||||||||||||||  |||||  |  ||||||    
T  29405567 tttgcgggtaattaccc-tacccgtgcccatacccatgaaagcggagttttatcctaccaattatgggtattttttgcgggtgcccatcaggtctgggtc 29405469  T
Q  199 caattgtcatccct 212  Q
    |||||| |||||||    
T  29405468 caattgccatccct 29405455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 213
Target Start/End: Original strand, 38444225 - 38444398
Alignment:
Q  39 tatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggtattacccagatccgtccccagatccatga 137  Q
    |||||| ||||||||||| ||||||| ||||||||| |||||||| |||||| ||||||||||| ||||||||||||| || || ||||||||   ||||    
T  38444225 tatatgtggggttgcggggctgggcagtatagtacccttacccgtacccatacccatttaaattcgtgggtattacccggacccttccccagacttatga 38444324  T
Q  138 aaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
     |  |||| ||||||| ||||| | ||| |||||| |  |||||||||| | || |||||| |||| |||||||||    
T  38444325 tagtggggttttaccctacccattatggatattttat--gggtatccattgggcctgggtcaaattatcatcccta 38444398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 33733699 - 33733910
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| |||| ||||||| |||||||| | ||||||||| |||||||||  |||| ||||| |||    
T  33733699 aaaaataaataaagtatttattatattatataaatatgtacatgc-gggttgcggggctgggtagtatagtacccttacccgtgttcatacccattaaaa 33733797  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| |||| ||||| |  | ||||  |||  ||||| ||||  ||| ||||||| ||||| ||||  ||||||||||||||||||||||||  | ||||    
T  33733798 tttgcgggtaattactc-tacccgtgtccatgtccat-aaaagcgggttttaccctacccattgtgaatattttttgcgggtatccatcgagtctaggtc 33733895  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||| ||||    
T  33733896 caattgccattccta 33733910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 52802052 - 52801944
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| |||| ||||||| |||||||| | ||||||||| ||||| ||| ||||| ||||| |||    
T  52802052 aaaaataaataaagtatttattatattatataaatatgtacatgc-gggttgcggggctgggtagtatagtacccttacctgtgtccatacccattaaaa 52801954  T
Q  100 tttgtgggta 109  Q
    |||| |||||    
T  52801953 tttgcgggta 52801944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 45097886 - 45098096
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| |||| ||||||| |||||||| | || | |||| ||||||||  ||||| ||||| |||    
T  45097886 aaaaataaataaagtatttattatattatataaatatgtacatgc-gggttgcggggctgggtagtacaatacccttacccgt-tccatacccattaaaa 45097983  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| |||| |||||||  | |||| |||| | | || ||| ||| | ||||||| ||| | |||||||||||||||| ||| ||||||  |  ||||||    
T  45097984 tttgcgggtaattaccc-tacccgt-cccatacctataaaagcggagttttaccctacctattgtgggtattttttgcaggtgtccatcaggtctgggtc 45098081  T
Q  199 caattgtcatcccta 213  Q
    |||||||||||||||    
T  45098082 caattgtcatcccta 45098096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 24486956 - 24487064
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| |||||||||||||| ||||||| |||||||| | |||||| || ||||||   |||||| |||| ||||    
T  24486956 aaaaataaataaaatatttattatattatataaatatgtatatgc-gggttgcggggctgggtagtatagtgcccttacccacacccatacccatctaaa 24487054  T
Q  100 tttgtgggta 109  Q
    |||| |||||    
T  24487055 tttgcgggta 24487064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 125 - 213
Target Start/End: Original strand, 13082592 - 13082680
Alignment:
Q  125 cccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
    |||||| |||| ||| ||||| ||||||| ||||| ||  ||| |||||||||||||||||||| || ||||| |||||||||||||||    
T  13082592 cccagacccataaaagcggggttttaccctacccattgcaggttttttttgcgggtatccatcgggcctgggttcaattgtcatcccta 13082680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4757430 - 4757477
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggg 48  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  4757430 aaaaataaataaataatttatgatattatataaatatgtatatgcggg 4757477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 7117756 - 7117654
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||| ||||||||||| ||||| || |||||||||||| | ||||||| || ||||||| ||||||||| ||||||   |||||| |||||||||    
T  7117756 aaaaataaacaaattatttattatattgtataaatatgtatatac-gggttgcaggtctgggcagtatagtacccttacccacacccatacccatttaaa 7117658  T
Q  100 tttg 103  Q
    ||||    
T  7117657 tttg 7117654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 8614853 - 8614964
Alignment:
Q  4 aataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaatttg 103  Q
    |||||||||||||||||| || ||||| ||||||||||||| ||| |   ||||||| |||||||||||| ||| ||||  | ||| | |||||||||||    
T  8614853 aataaataaattatttatcattttatataaatatgtatatgtgggttgtggggctggacaatatagtacccttatccgtatctataccaatttaaatttg 8614952  T
Q  104 tgggtattaccc 115  Q
     ||||| |||||    
T  8614953 cgggtaataccc 8614964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 27586365 - 27586314
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttg 52  Q
    |||||||||||||||||||||||||||||| ||||||| ||||| |||||||    
T  27586365 aaaaataaataaattatttatgatattatataaatatgcatatgtggggttg 27586314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 180
Target Start/End: Original strand, 11035006 - 11035183
Alignment:
Q  4 aataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaattt 102  Q
    |||| ||||||||||||| |||||||| ||| |  |||||||||| ||||||| ||||| | ||||||  |  ||||||||||| || || ||||| |||    
T  11035006 aatatataaattatttattatattatataaaaacatatatgcggg-ttgcggggctgggtagtatagtgtcaatacccgtgcccgtacccttttaagttt 11035104  T
Q  103 gtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggt 180  Q
    | ||||| |||||| || || | || | |||||||||| ||||| ||||||| ||||| || || ||||||||||||||    
T  11035105 gcgggtaattacccggacccatgcctatatccatgaaagcggggttttaccctacccattgcggatattttttgcgggt 11035183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 214
Target Start/End: Complemental strand, 8589502 - 8589413
Alignment:
Q  125 cccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatccctat 214  Q
    |||| ||| |||||| ||||| ||||||| ||||| || || |||||||||||||| |||||||||| |||||| ||||| || ||||||    
T  8589502 cccatatctatgaaagcggggttttaccctacccattgcggctattttttgcgggtgtccatcgagcctgggtctaattgccacccctat 8589413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 28233923 - 28233744
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||||| | |||||||| |||||  ||||||| ||||||| |||||||| | || ||| ||  ||| |||||||||| |||| ||||    
T  28233923 aaaaataaataaattattt-taatattatataaatacatatatgc-gggttgcggggctgggtagtacagtgcccatactcgtgcccatacccatataaa 28233826  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggt 180  Q
    |||| |||| |||| ||| | ||   ||| || |||||||| ||||| ||||||| |||||  | |||||||||||||||||    
T  28233825 tttgcgggtaattatccatacccaagcccggacccatgaaagcggggttttaccctacccatagcgggtattttttgcgggt 28233744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 8644034 - 8643935
Alignment:
Q  4 aataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaattt 102  Q
    |||||||||||||||||| || ||||| |||||||||||||| |||||| |||  |||||||||||||||| |||  ||| || ||| | ||||||||||    
T  8644034 aataaataaattatttatcattttatataaatatgtatatgc-gggttgtgggattgggcaatatagtacccttattcgtacctataccaatttaaattt 8643936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 213
Target Start/End: Complemental strand, 31713351 - 31713141
Alignment:
Q  4 aataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaattt 102  Q
    |||| ||||||||||||| |||||||| |||||  ||| ||| ||||||| ||| |||| | |||||| ||  || ||||| || ||||| ||||| |||    
T  31713351 aatatataaattatttattatattatataaatacatatgtgc-gggttgcggggatgggtagtatagtgcccgtatccgtgtccgtatccttttaagttt 31713253  T
Q  103 gtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaa 201  Q
    | |||| ||||| | || || | |||| | |||||||| ||||| ||||||| ||||| || | ||| ||||||||| |  ||||||||| |||||| ||    
T  31713252 gcgggtaattactcggacccatgcccatacccatgaaagcggggatttaccctacccattgcgagtaatttttgcggatgcccatcgagcctgggtctaa 31713153  T
Q  202 ttgtcatcccta 213  Q
    ||| ||||||||    
T  31713152 ttgccatcccta 31713141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 214
Target Start/End: Complemental strand, 22306358 - 22306276
Alignment:
Q  132 ccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatccctat 214  Q
    |||||||| ||||| ||||||| ||||| ||  |||| ||||||||| || |||||| || |||||| |||||||||||||||    
T  22306358 ccatgaaagcggggatttaccctacccattgcaggtaatttttgcggatacccatcgggcctgggtctaattgtcatccctat 22306276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 213
Target Start/End: Complemental strand, 26337336 - 26337198
Alignment:
Q  76 tacccgtgcccatatccatttaaatttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtatttttt 174  Q
    |||||||||||||| |||| |||||||| |||| |||||||| | ||   ||| || |||||||| | ||| ||||||| |||||  | |||||||||||    
T  26337336 tacccgtgcccatacccatataaatttgcgggtaattacccatacccaagcccggacccatgaaagcagggttttaccctacccatagcgggtatttttt 26337237  T
Q  175 gcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
    ||||||  |||| | |  |||||||||||| ||||||||    
T  26337236 gcgggtgcccatagggtctgggtccaattgccatcccta 26337198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 44292806 - 44292764
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatat 43  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  44292806 aaaaataaataaattatttataatattatataaatatgtatat 44292764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 9609338 - 9609446
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgg-gctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| ||||||||  ||||||||||||| ||||||||| ||| || | |||||| | ||||||||  |||||| ||| |||||    
T  9609338 aaaaataaataaagtatttattatattatatgaatatgtatatgc-gggttgcggagctaggtagtatagtgcttttacccgcacccatacccacttaaa 9609436  T
Q  100 tttgtgggta 109  Q
     ||| |||||    
T  9609437 attgcgggta 9609446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14595639 - 14595683
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgc 45  Q
    ||||||||||||| ||||||| |||||||| ||||||||||||||    
T  14595639 aaaaataaataaaatatttattatattatataaatatgtatatgc 14595683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 213
Target Start/End: Original strand, 22830164 - 22830374
Alignment:
Q  4 aataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaattt 102  Q
    |||| ||||||||||||| |||||||| |||||  ||| ||| ||||||| ||| |||| | |||||| ||  |||||||| || || || ||||| |||    
T  22830164 aatatataaattatttattatattatataaatacatatgtgc-gggttgcggggatgggtagtatagtgcccatacccgtgtccgtacccttttaagttt 22830262  T
Q  103 gtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaa 201  Q
    | |||| ||||||| || || | |||| | |||||| | ||||| ||||||| ||||| || ||||| ||||| ||| || ||||||  | |||||| ||    
T  22830263 gcgggtaattacccggacccatgcccatacccatgatagcggggatttaccctacccattgcgggtaatttttacggatacccatcggacctgggtctaa 22830362  T
Q  202 ttgtcatcccta 213  Q
    ||| ||||||||    
T  22830363 ttgccatcccta 22830374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 41781011 - 41781058
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggg 48  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||||||    
T  41781011 aaaaataaataaattatttatcatattatataaatacatatatgcggg 41781058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 46257941 - 46257831
Alignment:
Q  3 aaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatt 101  Q
    |||||||||| |||||||  ||||| || ||| |||||||||||||||||||||  |||| | ||||||||| ||||||||| | | | ||||   ||||    
T  46257941 aaataaataa-ttatttaaaatattgtataaacatgtatatgcggggttgcgggaatgggtagtatagtacccttacccgtgtctagacccataacaatt 46257843  T
Q  102 tgtgggtattac 113  Q
    ||||||||||||    
T  46257842 tgtgggtattac 46257831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9930830 - 9930876
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcgg 47  Q
    ||||||||||||| ||||||| |||||| | ||||||||||||||||    
T  9930830 aaaaataaataaaatatttattatattaaataaatatgtatatgcgg 9930876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12518573 - 12518527
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcgg 47  Q
    ||||||||||||| ||||||  |||||||| ||||||||||||||||    
T  12518573 aaaaataaataaaatatttactatattatataaatatgtatatgcgg 12518527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 19444394 - 19444344
Alignment:
Q  163 tgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
    |||||||||||||||||| ||||  | | ||||||||||||||||||||||    
T  19444394 tgggtattttttgcgggtgtccactgggtttgggtccaattgtcatcccta 19444344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 213
Target Start/End: Original strand, 39804698 - 39804831
Alignment:
Q  81 gtgcccatatccatttaaatttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcggg 179  Q
    ||||||||| |||| |||||||| ||||| ||||||| | ||   |||||| |||| ||| || || |||| || |||||  | ||||||||||||||||    
T  39804698 gtgcccatacccatataaatttgcgggtaattacccatacccaagcccagacccataaaagcgaggttttatcctacccatagcgggtattttttgcggg 39804797  T
Q  180 tatccatcgagcttgggtccaattgtcatcccta 213  Q
    |  |||| | |  |||||||||||||||||||||    
T  39804798 tgcccatagggtctgggtccaattgtcatcccta 39804831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 23349264 - 23349104
Alignment:
Q  54 gggctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacc 152  Q
    |||||||| | |||||| ||  ||||||||||| || || ||||| |||| ||||| |||||| || || | |||| | ||| |||| ||| | ||||||    
T  23349264 gggctgggtagtatagtgcccatacccgtgcccgtacccttttaagtttgcgggtaattacccggacccatgcccatacccacgaaagcggagttttacc 23349165  T
Q  153 caacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
    | ||||| |  || | |||| || ||||||| |||| || |||||||||||||||||||||    
T  23349164 ctacccattacggattttttatgtgggtatctatcgggcctgggtccaattgtcatcccta 23349104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 5e-60; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 25467786 - 25468003
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| ||||||||||| | |||||||| |||||||||||||||| ||||||| ||||||||| |||| |||||||||| |||||||||    
T  25467786 aaaaataaataaattacttatgatattaaataaatatgtttatgcggggttgcggggctgggcagtatagtacccttactcgtgcccatacccatttaaa 25467885  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    || |||| |||||||| || ||||||||||| |||||| | ||||  ||||||| ||||| |||||||||||| ||||||||||||| | || |||||||    
T  25467886 ttcgtggatattacccggacccgtccccagacccatgatagcgggattttaccctacccattgtgggtattttatgcgggtatccattgggcctgggtcc 25467985  T
Q  200 aattgtcatccctatcca 217  Q
    ||||||||||||||||||    
T  25467986 aattgtcatccctatcca 25468003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 11672026 - 11672239
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| ||||||||||| | ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| ||||| |||    
T  11672026 aaaaataaataaattacttatgatattaaataaatatgtatatgcggggttgcgggtctgggcagtatagtacccttacccgtgcccatacccattaaaa 11672125  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    || |||| |||||||| || ||||||||||| |||||| | ||||| ||||||| ||||| |||||||||||| || |||||||||| | || |||||||    
T  11672126 ttcgtggatattacccggacccgtccccagacccatgatagcggggttttaccctacccattgtgggtattttatgtgggtatccattgggcctgggtcc 11672225  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  11672226 aattgccatcccta 11672239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 19618982 - 19619195
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  19618982 aaaaataaataaataatttatgatattatataaatatgtatatgcggggttgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 19619081  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | |||| |||||| |||| ||| ||||| ||||||| ||||| ||||||||||||||| ||||| |||| | |  |||||||    
T  19619082 tttgtgggtattacccgtacccgtgcccagacccataaaagcggggttttaccctacccattgtgggtattttttgtgggtacccattgggtctgggtcc 19619181  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  19619182 aattgccatcccta 19619195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 5040865 - 5040653
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    |||||||||||||||| ||||||||||| | ||||||||||||| |||||   |||||||||| ||||||| | ||||||||||||||| ||||| ||||    
T  5040865 aaaaataaataaattacttatgatattaaataaatatgtatatgtggggtgcggggctgggcagtatagtatccttacccgtgcccatacccattaaaat 5040766  T
Q  101 ttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcca 200  Q
    | ||||||||||||| ||||||||||||||||||||| | ||||| ||||||| ||||| ||||| |||||| ||||||||||||| | || ||||||||    
T  5040765 tcgtgggtattacccggatccgtccccagatccatgatagcggggttttaccctacccattgtggatattttatgcgggtatccattgggcctgggtcca 5040666  T
Q  201 attgtcatcccta 213  Q
    |||| ||||||||    
T  5040665 attgccatcccta 5040653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 24987218 - 24987005
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||  |||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  24987218 aaaaataaataaataatttatgatattatataaatatgtatatgcgggtatgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 24987119  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | ||||  ||||| |||| ||| ||||| ||||||| ||||| |||||||||||||||||||||||||| | | ||||||||    
T  24987118 tttgtgggtattacccgtacccgtgtccagacccataaaagcggggttttaccctacccattgtgggtattttttgcgggtatccattgggtttgggtcc 24987019  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||| ||||    
T  24987018 aattgccattccta 24987005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 39352756 - 39352942
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  39352756 aaaaataaataaataatttatgatattatataaatatgtatatgcggggttgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 39352855  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccat 186  Q
    ||||||||||||||||  | |||| |||||| |||| ||| | ||| ||||||| ||||| ||||||||||||||||||||| ||||    
T  39352856 tttgtgggtattacccgtacccgtacccagacccataaaagcagggttttaccctacccattgtgggtattttttgcgggtacccat 39352942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 23298139 - 23297926
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||||| |||||| ||||||| ||||||||| |||||||||| |||| ||||| |||    
T  23298139 aaaaataaataaattacttatgatattaaataaatatgtatatgcggggctgcggggctgggcagtatagtacccttacccgtgctcatacccattaaaa 23298040  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    |||||||||||||||| ||  |||||||||| |||||| |  |||| ||||||| ||||| |||||||||||| ||| ||||||||| || | ||||||     
T  23298039 tttgtgggtattacccggactcgtccccagacccatgatagtggggttttaccctacccattgtgggtattttatgctggtatccattgaacctgggtct 23297940  T
Q  200 aattgtcatcccta 213  Q
    ||||||||||||||    
T  23297939 aattgtcatcccta 23297926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 41924266 - 41924479
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||  ||||||||||||||| |||||||||||||||||  || ||| ||||||| ||||||||| |||||||||||||||| |||||||     
T  41924266 aaaaataaataaacaatttatgatattatataaatatgtatatgcgggtctgtgggtctgggcagtatagtacccttacccgtgcccatattcatttaat 41924365  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | |||| ||||||||||| ||| ||||| ||||||| ||||| |||||||||||||||||||||||||| ||   ||| |||    
T  41924366 tttgtgggtattacccgtacccgtacccagatccataaaagcggggttttaccctacccattgtgggtattttttgcgggtatccattgaatctggatcc 41924465  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  41924466 aattgccatcccta 41924479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 44792449 - 44792236
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||  |||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  44792449 aaaaataaataaataatttatgatattatataaatatgtatatgcgggtctgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 44792350  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | |||| |||||| | |  ||| ||||| ||||||| ||||| |||||||||||||||||||||||||| | |  |||||||    
T  44792349 tttgtgggtattacccgtacccgtgcccagacctagaaaagcggggttttaccctacccattgtgggtattttttgcgggtatccattgggtctgggtcc 44792250  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  44792249 aattgccatcccta 44792236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 49360251 - 49360461
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| |||||||||||||||  |||||||||||||||| ||||||| ||||| | ||||||||| |||||||||||| || ||||||||     
T  49360251 aaaaataaataaataatttatgatattata--aatatgtatatgcggg-ttgcgggtctgggtagtatagtacccttacccgtgcccgtacccatttaat 49360347  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | |||| ||||||||||| ||| ||||| ||||||| ||||| ||||| ||||||||||||||| |||| |    |||||||    
T  49360348 tttgtgggtattacccgtacccgtgcccagatccataaaagcggggttttaccctacccattgtggatattttttgcgggtacccattggatctgggtcc 49360447  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  49360448 aattgccatcccta 49360461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 45079004 - 45078793
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| |||| ||||||| |||||||| | ||||||||| |||| |||| ||||| ||||| |||    
T  45079004 aaaaataaataaagtatttattatattatataaatatgtacatgc-gggttgcggggctgggtagtatagtacccttacacgtgtccatacccattaaaa 45078906  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    |||| |||||||| ||  | |||| |||| | |||||||| ||||| ||||||| ||||  ||||||||||||||||||||| ||||||||  |||||||    
T  45078905 tttgcgggtattatcc-tacccgtgcccatacccatgaaagcggggttttaccctacccgttgtgggtattttttgcgggtacccatcgagtctgggtcc 45078807  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  45078806 aattgccatcccta 45078793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 50480881 - 50480694
Alignment:
Q  1 aaaaataaataaattatttatgatat--tatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccattta 97  Q
    |||||||||||||| |||||||||||  |||| ||||||||||||||||| ||||||| ||||| | ||||||||| |||||||||||| || |||||||    
T  50480881 aaaaataaataaataatttatgatatattatataaatatgtatatgcggg-ttgcgggtctgggtagtatagtacccttacccgtgcccgtacccattta 50480783  T
Q  98 aatttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccat 186  Q
    | ||||||||||||||||  | ||||  |||||||||| ||| ||||| ||||||| ||||| ||||| ||||||||| ||||||||||    
T  50480782 attttgtgggtattacccgtacccgtgtccagatccataaaagcggggttttaccctacccattgtggatattttttgtgggtatccat 50480694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 14418510 - 14418722
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||||||| |||||||| |||||||||||| | ||||||| ||||| |||| ||||||||| |||||| | |||||| |||||||||    
T  14418510 aaaaataaataaattatttatcatattatataaatatgtatatac-gggttgcggggcttggcagtatagtacccttacccatacccatacccatttaaa 14418608  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||| ||| || ||||| |||||   ||  ||||||||||| ||||| ||||||| ||||| | ||||||||||||||||||| | ||||  | || ||||    
T  14418609 tttatggataatacccggatccaaacctggatccatgaaagcggggttttaccctacccattatgggtattttttgcgggtaccgatcggacctgagtcc 14418708  T
Q  200 aattgtcatcccta 213  Q
    |||||| |||||||    
T  14418709 aattgttatcccta 14418722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 11 - 213
Target Start/End: Original strand, 48080357 - 48080552
Alignment:
Q  11 aaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggtat 110  Q
    |||||| ||||||||||| | ||||||||||||||||||       ||||||| ||||||||| ||||||||||||||| ||||||||||| ||||||||    
T  48080357 aaattacttatgatattaaataaatatgtatatgcgggg-------ctgggcattatagtacccttacccgtgcccatacccatttaaattcgtgggtat 48080449  T
Q  111 tacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcc 210  Q
    ||||| || |||||||| | ||| ||| | ||||| ||||||| ||| | |||||||||||| ||| ||||||||| |  | | |||||||||| |||||    
T  48080450 tacccggacccgtccccggttccttgatagcggggttttaccctaccaattgtgggtattttatgctggtatccattggtcctaggtccaattgacatcc 48080549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 22844948 - 22844793
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| || |||| |||| |||| ||||| ||||||||||||||    
T  22844948 aaaaataaataaattatttatgatattatataaatatgtatatgcggggttgcggggttggacagtataatacccttacgcgtgctcatatccatttaaa 22844849  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaa 155  Q
    ||| |||||||||||  || ||||  ||| | |||||||| ||||| |||| ||||    
T  22844848 tttatgggtattacctggacccgtgtccaaacccatgaaagcggggttttatccaa 22844793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 42096541 - 42096330
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| |||| ||||||| |||||| | | ||||||||| ||||||||| ||||||||||| |||    
T  42096541 aaaaataaataaagtatttattatattatataaatatgtacatgc-gggttgcggggctgagtagtatagtacccttacccgtgtccatatccattaaaa 42096443  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| |||| |||||||  | |||| |||| |||||||||| ||||| ||||||| | ||| ||||||||||||||||||||  |||||| |  ||||||    
T  42096442 tttgcgggtaattaccc-tacccgtgcccatatccatgaaagcgggg-tttaccctatccattgtgggtattttttgcgggtgcccatcgggtctgggtc 42096345  T
Q  199 caattgtcatcccta 213  Q
     ||||| ||||||||    
T  42096344 aaattgccatcccta 42096330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 40564239 - 40564389
Alignment:
Q  2 aaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaatt 101  Q
    |||| |||||||||| ||||||||||| | ||||||||||||||||         ||||||| ||||||||| ||||||||||||||| |||||||||||    
T  40564239 aaaaaaaataaattacttatgatattaaataaatatgtatatgcggct-------ctgggcagtatagtacccttacccgtgcccatacccatttaaatt 40564331  T
Q  102 tgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaaccca 159  Q
     |||||||||||||| | |||||||||||| ||||| | ||||| ||||||| |||||    
T  40564332 agtgggtattacccaaacccgtccccagattcatgatagcggggttttaccctaccca 40564389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 6408871 - 6408984
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||  |||||||||||||| ||||||||||  | ||||||||||| || |||| ||||||||| |||||||||||||||| |||||||     
T  6408871 aaaaataaataaatagtttatgatattatataaatatgtatgagtggggttgcgggtctcggcagtatagtacccttacccgtgcccatattcatttaat 6408970  T
Q  100 tttgtgggtattac 113  Q
    ||||||||||||||    
T  6408971 tttgtgggtattac 6408984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 13735437 - 13735269
Alignment:
Q  18 ttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggtattaccca 116  Q
    ||||||||||||| ||||||||||||||| | ||||||| ||||| | ||||||| | ||| |||||||| || |||||||| |||||||||||||||      
T  13735437 ttatgatattatataaatatgtatatgcgag-ttgcgggtctgggtagtatagtatcattatccgtgcccgtacccatttaattttgtgggtattacctg 13735339  T
Q  117 gatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccat 186  Q
     | |||| ||||||||||| |||  |||| ||||||| ||||| ||||| ||||||||||||||| ||||    
T  13735338 tacccgtgcccagatccataaaagtggggttttaccctacccattgtggatattttttgcgggtacccat 13735269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 37 - 213
Target Start/End: Original strand, 50809137 - 50809314
Alignment:
Q  37 tgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggtattacccagatccgtccccagatccat 135  Q
    |||||||||||||||||||| ||||||| ||||||||  ||||||||||||||| |||||||| |||| |||||||| ||  |  ||| |||||| ||||    
T  50809137 tgtatatgcggggttgcgggtctgggcagtatagtactcttacccgtgcccatacccatttaattttgcgggtattatccgtactcgtacccagacccat 50809236  T
Q  136 gaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
     ||| ||||| ||||||  ||||| |||| ||||||||||| |||| |||| ||   |||||||||||| ||||||||    
T  50809237 aaaagcggggttttaccttacccattgtgagtattttttgcaggtacccattgaatctgggtccaattgccatcccta 50809314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 37 - 213
Target Start/End: Complemental strand, 50866725 - 50866548
Alignment:
Q  37 tgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggtattacccagatccgtccccagatccat 135  Q
    |||||||||||||||||||| ||||||| ||||||||  ||||||||||||||| |||||||| |||| |||||||| ||  |  ||| |||||| ||||    
T  50866725 tgtatatgcggggttgcgggtctgggcagtatagtactcttacccgtgcccatacccatttaattttgcgggtattatccgtactcgtacccagacccat 50866626  T
Q  136 gaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
     ||| ||||| ||||||  ||||| |||| ||||||||||| |||| |||| ||   |||||||||||| ||||||||    
T  50866625 aaaagcggggttttaccttacccattgtgagtattttttgcaggtacccattgaatctgggtccaattgccatcccta 50866548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 211
Target Start/End: Complemental strand, 30247849 - 30247644
Alignment:
Q  5 ataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttg 103  Q
    ||||||||| ||||||| |||||||| ||||||||| ||||||| ||||||| ||||| | ||||||||  ||||| ||| ||||| ||||| |||||||    
T  30247849 ataaataaagtatttattatattatataaatatgtacatgcggg-ttgcggggctgggtagtatagtactcttacctgtgtccatacccattaaaatttg 30247751  T
Q  104 tgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaatt 203  Q
    |||  |||||||  | |||| |||| | |||| ||| ||| | ||||||| ||||| |||||||||||||||||||| ||||||| |  ||||||||| |    
T  30247750 tggtaattaccct-acccgtgcccatacccataaaagcggagttttaccctacccattgtgggtattttttgcgggtgtccatcgggtctgggtccaact 30247652  T
Q  204 gtcatccc 211  Q
    | ||||||    
T  30247651 gccatccc 30247644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 46819407 - 46819619
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||| |||||||  |||||||| |||||||||| ||||||||||| |||||| | | ||||||||| |||||||| |||||||||||   ||    
T  46819407 aaaaataaataa-ttatttaaaatattatataaatatgtatgtgcggggttgcggggctgtgtagtatagtacccttacccgtacccatatccataacaa 46819505  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||| |||||||||||| || || |   || ||||| |||| ||| | ||||||| ||||| ||||| ||||||||||||  ||||||  |   ||| |||    
T  46819506 tttatgggtattacccggacccatgttcatatccaagaaagcggagttttaccctacccattgtggatattttttgcggacatccattaaatctggatcc 46819605  T
Q  200 aattgtcatcccta 213  Q
    ||||||||||||||    
T  46819606 aattgtcatcccta 46819619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 204
Target Start/End: Original strand, 39952825 - 39953004
Alignment:
Q  19 tatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggtattacccag 117  Q
    |||||||||| | ||||||||||||| | ||||||||| || | || ||||||||| |||| |||||||||||||||||||||| |||| ||||||        
T  39952825 tatgatattaaataaatatgtatatgagaggttgcggggctagacagtatagtacccttactcgtgcccatatccatttaaattcgtggatattac---- 39952920  T
Q  118 atccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattg 204  Q
      |||||| |||| |||||| | | ||| ||||||| ||||| |||||||||||| ||||||||| ||| |||| || || ||||||    
T  39952921 --ccgtcctcagacccatgatatc-gggttttaccctacccattgtgggtattttatgcgggtattcattgagcctgagttcaattg 39953004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 32995581 - 32995794
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||| ||||||| |||||||| | || ||| ||  ||||||||| |||| ||||  |||    
T  32995581 aaaaataaataaattatttataatattatataaatacatatatgc-gggttgcggggctgggtagtacagtgcccatacccgtgctcatacccatacaaa 32995679  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| |||| |||||||| | ||   ||| || |||||||| ||||| ||||||| |||||  | |||||||||||| |||| ||||| | |  ||||||    
T  32995680 tttgcgggtaattacccatacccaagccctgacccatgaaagcggggttttaccctacccatagcgggtattttttgtgggtgtccatagggtctgggtc 32995779  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||||||||    
T  32995780 caattgccatcccta 32995794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 36678867 - 36678654
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||||||| |||||||| |||||  |||||||||| |||| |||||||| | |||||| ||  ||||||||||||||||||| ||||    
T  36678867 aaaaataaataaattatttataatattatataaatacatatatgcggg-ttgcagggctgggtagtatagtgcccatacccgtgcccatatccatataaa 36678769  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| || | ||||| || | ||   ||| || | |||||| ||||| ||||||| |||||  | ||||||||||| |||||  |||| |    ||||||    
T  36678768 tttgcggataattactcatacccaagcccggacctatgaaagcggggttttaccctacccatagcgggtatttttttcgggtgcccataggatctgggtc 36678669  T
Q  199 caattgtcatcccta 213  Q
    |||||||||||||||    
T  36678668 caattgtcatcccta 36678654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 50508683 - 50508571
Alignment:
Q  2 aaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaatt 101  Q
    |||| |||||||||| ||||||||||| | ||||||||||||||||||||| ||| | ||     ||||||| |||||| ||||||||  ||||||||||    
T  50508683 aaaaaaaataaattacttatgatattaaataaatatgtatatgcggggttgtggggttgg----gtagtacccttacccatgcccatacacatttaaatt 50508588  T
Q  102 tgtgggtattacccaga 118  Q
     ||||||||||||||||    
T  50508587 cgtgggtattacccaga 50508571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 41410057 - 41409846
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||| ||||||| ||||||| |||||||| |||| |||| ||||||| ||||||| ||||| | ||||||||||||||||||| ||||| ||||| |||    
T  41410057 aaaaacaaataaagtatttattatattatataaatttgtacatgcggg-ttgcggggctgggtagtatagtacctttacccgtgtccatacccattaaaa 41409959  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| | || ||||| |  | |||| |||| | ||||||||  |||| |||| || ||| | ||||| ||||||||||||||  |||||  |  || |||    
T  41409958 tttgcgagtaattacgc-tacccgtgcccatacccatgaaagtggggttttatcctacctattgtggatattttttgcgggtgcccatcaggtctgagtc 41409860  T
Q  199 caattgtcatccct 212  Q
    ||||||||||||||    
T  41409859 caattgtcatccct 41409846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 10085020 - 10084843
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||||||| |||||||| |||||  || |||| ||||||| |||||||| | || ||| ||  |||||||||||||| |||| ||||    
T  10085020 aaaaataaataaattatttataatattatataaatacatagatgc-gggttgcggggctgggtagtacagtgcccatacccgtgcccatacccatataaa 10084922  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcg 177  Q
    |||| |||| |||||||| | ||   | | || |||||||| ||||| ||||||| |||||  | ||||||||||||||    
T  10084921 tttgcgggtaattacccatacccaagctcggacccatgaaagcggggttttaccctacccatagcgggtattttttgcg 10084843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 26291540 - 26291326
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||  |||||||| ||||||| ||||||||||| || ||| |||| | ||||||||| |||||||   ||||| ||||| |||    
T  26291540 aaaaataaataaagtatttaatatattatataaatatgcatatgcggggtagcagggttgggtagtatagtacccttacccgcatccatacccattaaaa 26291441  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| |||| ||||| | || ||   |||| |  ||||||||||| | ||||||| ||||| |  |||  |||||||||||| ||||| | || || |||    
T  26291440 tttgagggtaattactcggacccaagcccatactcatgaaaacggagttttaccctacccattacggggtttttttgcgggtgtccatagggcctgtgtc 26291341  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||||||||    
T  26291340 caattgacatcccta 26291326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 9162729 - 9162621
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||| ||||| |||| ||||||| ||| |||| | |||||||||||||||||  |||||| |||| ||||    
T  9162729 aaaaataaataaaatatttattatattatataaaaatgtacatgc-gggttgcggggatgggtagtatagtacctttacccgcacccatacccatctaaa 9162631  T
Q  100 tttgtgggta 109  Q
    |||| |||||    
T  9162630 tttgcgggta 9162621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 46584862 - 46584969
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||||||| || ||||| |||||||| ||||| ||||||| ||| ||| ||||||| |||| ||| |||||||| || |||||||||    
T  46584862 aaaaataaataaattatttataattttatataaatatgtctatgc-gggttgcggggttggacaatataatacccttatccgtgccc-tacccatttaaa 46584959  T
Q  100 tttgtgggta 109  Q
    |||| |||||    
T  46584960 tttgcgggta 46584969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 10191940 - 10191763
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||||||| |||||||| |||||  || |||| ||||||| |||||||| | || ||| ||  ||| |||||||||| |||| ||||    
T  10191940 aaaaataaataaattatttataatattatataaatacatagatgc-gggttgcggggctgggtagtacagtgcccatactcgtgcccatacccatataaa 10191842  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcg 177  Q
    |||| |||| |||||||| | ||   | | || |||||||| ||||| ||||||| |||||  | ||||||||||||||    
T  10191841 tttgcgggtaattacccatacccaagctcggacccatgaaagcggggttttaccctacccatagcgggtattttttgcg 10191763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 28956643 - 28956435
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggct-gggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||  ||||||||||||| ||| ||||||| | ||| | |||||| || |||||    |||||| |||| ||||    
T  28956643 aaaaataaataaaatatttattatattatttaaatatgtatatgaggg-ttgcggggttgggtagtatagtgcccttacctacacccatacccatctaaa 28956545  T
Q  100 tttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| ||||| |||||| || ||   |||| | |||| ||   | || ||||||| ||||| || ||||||||||| ||||| ||||||| || ||| ||    
T  28956544 tttgcgggtaattacccggacccaagcccatacccataaatgtgaggttttaccctacccattgcgggtattttttacgggtgtccatcgggcctggatc 28956445  T
Q  199 caattgtcat 208  Q
    ||||||||||    
T  28956444 caattgtcat 28956435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 38694602 - 38694494
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||  ||||||| |||||||| | || ||| ||  |||||||||||||| |||  ||||    
T  38694602 aaaaataaataaattatttataatattatataaatacatatatg-tgggttgcggggctgggtagtacagtgcccatacccgtgcccatacccaaataaa 38694504  T
Q  100 tttgtgggta 109  Q
    |||| |||||    
T  38694503 tttgcgggta 38694494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43657604 - 43657652
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcgggg 49  Q
    ||||||||||||||||||||| |||||||| |||||  |||||||||||    
T  43657604 aaaaataaataaattatttataatattatataaatacatatatgcgggg 43657652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 2012818 - 2012771
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggg 48  Q
    |||||||||| || ||||||| |||||||| |||||||||||||||||    
T  2012818 aaaaataaatcaaatatttattatattatataaatatgtatatgcggg 2012771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 27346920 - 27346967
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggg 48  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||||||    
T  27346920 aaaaataaataaattatttatcatattatataaatacatatatgcggg 27346967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 42882306 - 42882381
Alignment:
Q  135 tgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcc 210  Q
    |||||| |||| |||||||  |||| || ||||||||||||||| ||  ||||  |||||||||||||||||||||    
T  42882306 tgaaaatggggttttaccctgcccattgcgggtattttttgcggatactcatcaggcttgggtccaattgtcatcc 42882381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 2150507 - 2150465
Alignment:
Q  3 aaataaataaattatttatgatattatacaaatatgtatatgc 45  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||    
T  2150507 aaataaataaattatttatcatattatataaatatggatatgc 2150465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 35204615 - 35204661
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcgg 47  Q
    |||| |||||||||||||||| |||||||| |||||| |||||||||    
T  35204615 aaaattaaataaattatttatcatattatataaatatatatatgcgg 35204661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 1599972 - 1599891
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcg-gggttgc-gggctgggcaatatagtacctttaccc 80  Q
    ||||||||||||| ||||||| | |||||| ||||||||||||  | ||||||| |||||||  ||||||||||| ||||||    
T  1599972 aaaaataaataaaatatttattaaattatataaatatgtatatatgcgggttgcagggctggataatatagtaccattaccc 1599891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5908579 - 5908624
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcg 46  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||||    
T  5908579 aaaaataaataaattatttataatattatataaatacatatatgcg 5908624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 12905917 - 12905962
Alignment:
Q  11 aaattatttatgatattatacaaatatgtatatgcggggttgcggg 56  Q
    |||||| ||||||||||| | |||||| ||||||||||||||||||    
T  12905917 aaattacttatgatattaaataaatatatatatgcggggttgcggg 12905962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 35732579 - 35732624
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcg 46  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||||    
T  35732579 aaaaataaataaattatttataatattatataaatacatatatgcg 35732624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 39143930 - 39143834
Alignment:
Q  7 aaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttg 103  Q
    ||||||| || |||| |||||||| ||||||||||| |  |||||||||| ||| ||| ||||||||| |||| ||| ||||||  ||||||||||||    
T  39143930 aaataaaatacttatcatattatataaatatgtatacg-tgggttgcgggactgtgcagtatagtacccttactcgtacccatactcatttaaatttg 39143834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 5e-60; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 25425054 - 25425267
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||  |||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  25425054 aaaaataaataaataatttatgatattatataaatatgtatatgcgggtatgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 25425153  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | |||| ||||||||||| ||| ||||| ||||||| ||||| |||||||||||||||||||||||||| | |  |||||||    
T  25425154 tttgtgggtattacccgtacccgtgcccagatccataaaagcggggttttaccctacccattgtgggtattttttgcgggtatccattgggtctgggtcc 25425253  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  25425254 aattgccatcccta 25425267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 33867352 - 33867139
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||  |||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  33867352 aaaaataaataaataatttatgatattatataaatatgtatatgcgggtatgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 33867253  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | |||| |||||| |||| ||| ||||| ||||||| ||||| |||||||||||||||||||||||||| | |  |||||||    
T  33867252 tttgtgggtattacccgtacccgtgcccagacccataaaagcggggttttaccctacccattgtgggtattttttgcgggtatccattgggtctgggtcc 33867153  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  33867152 aattgccatcccta 33867139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 4481369 - 4481567
Alignment:
Q  16 atttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggtattacc 114  Q
    ||||||||||||||| |||||||||||||||||  || ||| ||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  4481369 atttatgatattatataaatatgtatatgcgggtctgtgggtctgggcagtatagtacccttacccgtgcccatatccatttaattttgtgggtattacc 4481468  T
Q  115 cagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
    |  | |||| ||||||||||| ||| ||||| ||||||| ||||| |||||||||||||||||||||||||| | |  |||||||||||| ||||||||    
T  4481469 cgtacccgtgcccagatccataaaagcggggttttaccctacccattgtgggtattttttgcgggtatccattgggtctgggtccaattgccatcccta 4481567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 29155618 - 29155830
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||| ||| ||| ||||||||| ||||||||||||||| |||||||||    
T  29155618 aaaaataaataaattatttacgatattatataaatatgtatatgcgtggttgcggggctgagcagtatagtacccttacccgtgcccatacccatttaaa 29155717  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    |||||||||||||||| || |||| |||| | |||||||| ||||| ||||||| ||| |   ||||||||||||||||| | |||||| |  ||||||     
T  29155718 tttgtgggtattacccggacccgtgcccaaacccatgaaagcggggttttaccctacctatcatgggtattttttgcgggcacccatcgggtctgggtct 29155817  T
Q  200 aattgtcatccct 212  Q
    ||||| |||||||    
T  29155818 aattgccatccct 29155830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 3329461 - 3329647
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||| ||| |||| |||| ||||||||||||||| ||||||||     
T  3329461 aaaaataaataaataatttatgatattatataaatatgtatatgcggggttgcgggtctgagcagtataatacccttacccgtgcccatacccatttaat 3329560  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccat 186  Q
    ||||||||||||||||  | |||| |||||| |||| ||||||||  ||||||| ||||| ||||| ||||||||||||||| ||||    
T  3329561 tttgtgggtattacccgtacccgtgcccagacccataaaaacgggattttaccctacccattgtggatattttttgcgggtacccat 3329647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 30241726 - 30241930
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||| ||||||||     
T  30241726 aaaaataaataaataatttatgatattatataaatatgtatatgcggggttgcgggtctgggcaatatagtacccttacccgtgctcatacccatttaat 30241825  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    |||||||||| |||      |||| |||| | |||| ||| ||||| ||||||| | ||| ||||| ||||||||||||||| |||| |||  |||||||    
T  30241826 tttgtgggtactac------ccgtacccaaacccataaaagcggggttttaccctatccattgtggctattttttgcgggtacccattgagtctgggtcc 30241919  T
Q  200 aattgtcatcc 210  Q
    ||||| |||||    
T  30241920 aattgccatcc 30241930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 23232033 - 23232246
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||   |||||| ||||||| ||||||||| |||||||||| |||||||||||||     
T  23232033 aaaaataaataaataatttatgatattatataaatatgtatatgcggatctgcgggtctgggcagtatagtacccttacccgtgctcatatccatttaat 23232132  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | || |  ||| | |||| ||| ||||| ||||||| ||||| ||||| ||||| |||||||||||||| | |  |||||||    
T  23232133 tttgtgggtattacccgtacccatgtccaaaaccataaaagcggggttttaccctacccattgtggatatttgttgcgggtatccattgggtctgggtcc 23232232  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  23232233 aattgccatcccta 23232246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 4289950 - 4290160
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| ||||||| ||||||| ||||| | ||||||||||| ||||||| ||||| ||||| |||    
T  4289950 aaaaataaataaagtatttattatattatataaatatgtacatgcggg-ttgcggggctgggtagtatagtacctt-acccgtgtccatacccattaaaa 4290047  T
Q  100 tttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| ||||| ||||| |   |||| |||| |||||||||| ||||| ||||||| ||||| ||||||||||||||||||||||||||||||  ||||||    
T  4290048 tttgcgggtaattacctac--ccgtgcccatatccatgaaagcggggttttaccctacccattgtgggtattttttgcgggtatccatcgagtctgggtc 4290145  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||||||||    
T  4290146 caattgccatcccta 4290160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 213
Target Start/End: Complemental strand, 667771 - 667576
Alignment:
Q  11 aaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggtat 110  Q
    |||||| ||||||||||| | |||||||||||||||||||||       |||| ||||||||| ||||||||||||||| ||||||||||| |||| |||    
T  667771 aaattacttatgatattaaataaatatgtatatgcggggttg-------ggcagtatagtacccttacccgtgcccatacccatttaaattcgtggatat 667679  T
Q  111 tacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcc 210  Q
    ||||| || ||||||||||| |||||| | ||||| ||||||| ||||| |||||||||||| |||| |||||||| | || || ||||||||| |||||    
T  667678 tacccggacccgtccccagacccatgatagcggggttttaccctacccattgtgggtattttatgcgagtatccattgggcctgagtccaattgccatcc 667579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 13142378 - 13142172
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||        ||||||| ||||||||| |||||||||||| |  |||||||| |    
T  13142378 aaaaataaataaataatttatgatattatataaatatgtatatgcgggt-------ctgggcagtatagtacccttacccgtgcccttgcccatttaatt 13142286  T
Q  101 ttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcca 200  Q
    ||||||||||||||   | |||| |||||| |||| ||| ||||| |||| || ||||| ||||||||||||||| ||||||| || |||  ||||||||    
T  13142285 ttgtgggtattacctgtacccgtgcccagacccataaaagcggggttttatcctacccattgtgggtattttttgtgggtatctattgagtctgggtcca 13142186  T
Q  201 attgtcatccctat 214  Q
    |||| |||||||||    
T  13142185 attgccatccctat 13142172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 32422549 - 32422404
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||  |||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  32422549 aaaaataaataaataatttatgatattatataaatatgtatatgcgggtatgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 32422450  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacgggg 145  Q
    ||||||||||||||||  | |||| |||||| |||| ||| |||||    
T  32422449 tttgtgggtattacccgtacccgtgcccagacccataaaagcgggg 32422404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 17961261 - 17961056
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||        ||||||| ||||||||| |||||||||||| || |||||||| |    
T  17961261 aaaaataaataaataatttatgatattatataaatatgtatatgcgggt-------ctgggcagtatagtacccttacccgtgcccgtacccatttaatt 17961169  T
Q  101 ttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcca 200  Q
    || |||||||||| |  |||||| | |||| |||| ||| ||||| ||||||| ||| | | |||||||||||||||| ||||||| |||  ||||||||    
T  17961168 ttatgggtattacgcgtatccgtgctcagacccataaaagcggggttttaccctacctattatgggtattttttgcggatatccattgagtctgggtcca 17961069  T
Q  201 attgtcatcccta 213  Q
    ||||  |||||||    
T  17961068 attgcaatcccta 17961056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 38620689 - 38620902
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggc-tgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| | ||||||||||||| ||||||||| |||||||  | || || |||||| ||||||||| ||||||||||||||||||||||||     
T  38620689 aaaaataaataaataaattatgatattatataaatatgtacatgcgggtctacgagcctgggcagtatagtacccttacccgtgcccatatccatttaat 38620788  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||| ||  | ||||  ||||| |||| ||| ||| | ||||||| ||||| | ||| |||||||||||| ||||||| |    |||||||    
T  38620789 tttgtgggtattatccgtacccgtgtccagacccataaaagcggtgttttaccctacccattatggatattttttgcggatatccattggatctgggtcc 38620888  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  38620889 aattgccatcccta 38620902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 213
Target Start/End: Complemental strand, 15150029 - 15149826
Alignment:
Q  11 aaattatttatgatattatacaaatatgtatatgcggggttgcgg-gctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggta 109  Q
    |||||| ||||||||||| | |||| ||||||||||||||||||| |||||| | ||||||| |  ||| |||| ||||| ||||||||||| |  ||||    
T  15150029 aaattaattatgatattaaataaatgtgtatatgcggggttgcggagctgggtagtatagtatccatactcgtgtccatacccatttaaattcgctggta 15149930  T
Q  110 ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatc 209  Q
    |||||| || |||||||||||||||||| | ||||| || |||| ||||| | ||| |||||| ||||||||||||| | |  || ||||||||||||||    
T  15149929 ttacccggacccgtccccagatccatgatagcggggtttcaccctacccattatggatattttatgcgggtatccattgggtctgagtccaattgtcatc 15149830  T
Q  210 ccta 213  Q
    ||||    
T  15149829 ccta 15149826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 31440443 - 31440269
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||        ||||||| ||||||||| ||||||||||||||| |||||||| |    
T  31440443 aaaaataaataaataatttatgatattatataaatatgtatatgcgggt-------ctgggcagtatagtacccttacccgtgcccatacccatttaatt 31440351  T
Q  101 ttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtat 182  Q
    |||||||||||||||  | || |  ||||| |||| ||| ||| | ||||||| ||||| |||||||||||||||| |||||    
T  31440350 ttgtgggtattacccgtacccatgtccagacccataaaagcggagttttaccctacccattgtgggtattttttgcaggtat 31440269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 4592000 - 4591794
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||       |||||| ||||||||| |||| ||||| |||  ||||| ||||    
T  4592000 aaaaataaataaattatttatgatattatataaatatgtatatgcggggt-------tgggcagtatagtacccttactcgtgctcattcccattaaaat 4591908  T
Q  101 ttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcca 200  Q
    |||||||||||||    |  ||| |||||| |||| ||| | | | |||| |  ||| | |||||||||||||| | |||| |||||| |||||||||||    
T  4591907 ttgtgggtattacatgtactcgtgcccagacccataaaagcagagtttta-cgtacctattgtgggtattttttacaggtacccatcgggcttgggtcca 4591809  T
Q  201 attgtcatccctatc 215  Q
    |||||||||||||||    
T  4591808 attgtcatccctatc 4591794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 44070219 - 44070130
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccata 89  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  44070219 aaaaataaataaataatttataatattatataaatatgtatatgcggggttgcgggtctgggcagtatagtacccttacccgtgcccata 44070130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 20937372 - 20937569
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    |||||||||||||||||||||||||||||| |||||| ||||||| ||||               |||||||| ||||| |||  |||| ||||| ||||    
T  20937372 aaaaataaataaattatttatgatattatataaatatatatatgcagggt---------------atagtacccttacctgtgttcatacccattaaaat 20937456  T
Q  101 ttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcca 200  Q
    ||||||||||||| | || ||||  ||||| |||||||| ||||| ||||||  ||||| ||||| |||||||||||| || |||| || | ||||||||    
T  20937457 ttgtgggtattactcggacccgtgtccagacccatgaaagcggggttttaccttacccattgtggatattttttgcggatacccattgaacgtgggtcca 20937556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 9205472 - 9205559
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgccca 87  Q
    |||||||||||| | ||||||||||||||| ||||||||||||||||||||||||| ||| ||| |||||||||  ||| ||||||||    
T  9205472 aaaaataaataagtaatttatgatattatataaatatgtatatgcggggttgcgggtctgagcagtatagtacccgtactcgtgccca 9205559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 11788960 - 11789174
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||||||| |||||||| || ||  |||||||||| ||||||| ||||| | || | | ||  |||||||||||||| |||| ||||    
T  11788960 aaaaataaataaattatttataatattatataattacatatatgcggg-ttgcggggctgggtagtacattgcccatacccgtgcccatacccatataaa 11789058  T
Q  100 tttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| ||||| ||| ||| | ||   ||| ||||||||||| || || ||||||| |||||  | || |||||||||| |||  |||| | |  ||||||    
T  11789059 tttgcgggtaattatccatacccaagcccggatccatgaaagcgaggttttaccctacccatagcggatattttttgcaggtgcccatagggtctgggtc 11789158  T
Q  199 caattgtcatccctat 214  Q
    |||||| |||||||||    
T  11789159 caattgccatccctat 11789174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 213
Target Start/End: Complemental strand, 29545785 - 29545575
Alignment:
Q  4 aataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaattt 102  Q
    |||| ||||||||||||| |||||||| |||||  ||| ||| ||||||| ||| |||| | |||||| ||  |||||||| || || || ||||| |||    
T  29545785 aatatataaattatttattatattatataaatacatatgtgc-gggttgcggggatgggtagtatagtgcccatacccgtgtccgtacccttttaagttt 29545687  T
Q  103 gtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaa 201  Q
    | |||| ||||||||||  | | |||| | ||||||||  |||| ||||||| ||||| || ||||| ||||||||| || |||||| || |||||| ||    
T  29545686 gcgggtaattacccagactcatacccatacccatgaaagtggggatttaccctacccattgcgggtaatttttgcggatacccatcgggcctgggtctaa 29545587  T
Q  202 ttgtcatcccta 213  Q
    ||| ||||||||    
T  29545586 ttgccatcccta 29545575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 16711159 - 16711057
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    |||| ||||||||| ||||||  ||||||| ||||||||||||||||| |   ||||| | || ||||||||| ||||| ||| ||||| ||||||||||    
T  16711159 aaaattaaataaatgatttatcgtattatataaatatgtatatgcgggttgtggggctcgacagtatagtacccttacctgtgtccatacccatttaaat 16711060  T
Q  101 ttg 103  Q
    |||    
T  16711059 ttg 16711057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 40475009 - 40474796
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| | |||||| ||| ||||||||||||| ||||||| ||||| | |||| || | |||||||  | |||| |||| ||||    
T  40475009 aaaaataaataaaatatttattacattatataaacatgtatatgcggg-ttgcggggctgggtagtataatatccttacccgcactcatacccatctaaa 40474911  T
Q  100 tttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| ||||| |||| | || ||    ||| |||||| ||  || || ||||||| | ||| |  ||||||||||||||||| ||||||||   ||||||    
T  40474910 tttgcgggtaattactcggacccaagtccatatccataaatgcgtggatttaccctatccattacgggtattttttgcgggtgtccatcgaatctgggtc 40474811  T
Q  199 caattgtcatcccta 213  Q
    |||||||||||||||    
T  40474810 caattgtcatcccta 40474796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 8027264 - 8027156
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||| ||||||| |||||||| | || ||| ||  ||||||||| |||| ||||  |||    
T  8027264 aaaaataaataaattatttataatattatataaatacatatatgc-gggttgcggggctgggtagtacagtgcccatacccgtgctcatacccatacaaa 8027166  T
Q  100 tttgtgggta 109  Q
    ||||||||||    
T  8027165 tttgtgggta 8027156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 12345176 - 12345095
Alignment:
Q  132 ccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
    |||||||| ||||| ||||||| |||||  | |||||||||||||||||  |||| ||| ||||||||||||| ||||||||    
T  12345176 ccatgaaagcggggttttaccctacccatagcgggtattttttgcgggtgcccatagagtttgggtccaattgccatcccta 12345095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 35005164 - 35005121
Alignment:
Q  5 ataaataaattatttatgatattatacaaatatgtatatgcggg 48  Q
    ||||||||||||||||| |||||||| |||||||||||||||||    
T  35005164 ataaataaattatttatcatattatataaatatgtatatgcggg 35005121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 12758060 - 12758128
Alignment:
Q  5 ataaataaattatttatgatattatacaaatatgtatatgcggggttgcgg-gctgggcaatatagtacc 73  Q
    ||||||||||||||||| |||||||| |||||||||||||  |||||||||  || ||||||||||||||    
T  12758060 ataaataaattatttatcatattatataaatatgtatatg-tgggttgcggaactaggcaatatagtacc 12758128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 81 - 213
Target Start/End: Original strand, 15162370 - 15162503
Alignment:
Q  81 gtgcccatatccatttaaatttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcggg 179  Q
    ||||||||| |||| |||||||| ||||| ||||||| | ||   ||| |||||||||||  |||  ||||||| |||||  | ||||||||||||||||    
T  15162370 gtgcccatacccatataaatttgcgggtaattacccatacccaagcccggatccatgaaagtgggattttaccctacccatagcgggtattttttgcggg 15162469  T
Q  180 tatccatcgagcttgggtccaattgtcatcccta 213  Q
    | ||||| |    |||||||||||||||||||||    
T  15162470 tgtccataggatctgggtccaattgtcatcccta 15162503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 17249290 - 17249347
Alignment:
Q  155 acccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatccct 212  Q
    ||||| ||||||||||||||||||||| |||| |  ||||||| ||||||||||||||    
T  17249290 acccattgtgggtattttttgcgggtacccattggacttgggttcaattgtcatccct 17249347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 125 - 214
Target Start/End: Complemental strand, 41935142 - 41935053
Alignment:
Q  125 cccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatccctat 214  Q
    |||| |||||||||| |||||  |||||| ||||| ||  ||||||||||||||||  |||||  || |||||| |||||||||||||||    
T  41935142 cccatatccatgaaagcggggtcttaccctacccattgcaggtattttttgcgggtgcccatcaggcctgggtctaattgtcatccctat 41935053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 35048970 - 35049175
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||||||| |||||| | |||||  |||||||||| | ||||| ||||| | || ||| ||  || ||||||||||| |||| ||||    
T  35048970 aaaaataaataaattatttataatattacataaatacatatatgcggg-tggcggggctgggtagtacagtgcccatatccgtgcccatacccatataaa 35049068  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| |||| |||||||| | ||   ||| || |||||||| ||||| |||||||  ||      |||||||||||||||||  |||| | | |||||||    
T  35049069 tttgcgggtaattacccatacccaagcccggacccatgaaagcggggttttaccc--cc------gggtattttttgcgggtgcccatagggtttgggtc 35049160  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||||||||    
T  35049161 caattgccatcccta 35049175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 8754230 - 8754277
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggg 48  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||||||    
T  8754230 aaaaataaataaattatttatcatattatataaatacatatatgcggg 8754277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10391439 - 10391392
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggg 48  Q
    ||||||||||||| ||||||| |||||||| ||||||||| |||||||    
T  10391439 aaaaataaataaagtatttattatattatataaatatgtacatgcggg 10391392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12345300 - 12345253
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggg 48  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||||||    
T  12345300 aaaaataaataaattatttataatattatataaatacatatatgcggg 12345253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 37286957 - 37287072
Alignment:
Q  4 aataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaatttg 103  Q
    |||||||||||||||||| |||||||| |||||||| ||| |||| ||  ||| |||||| |||| ||| |||| |    |||||||  |||||||||||    
T  37286957 aataaataaattatttatcatattatataaatatgtgtatacgggtttcggggttgggcagtataatacttttatctccacccatatttatttaaatttg 37287056  T
Q  104 tgggt-attacccaga 118  Q
     |||| ||||||||||    
T  37287057 cgggtaattacccaga 37287072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 42969373 - 42969420
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggg 48  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||||||    
T  42969373 aaaaataaataaattatttataatattatataaatacatatatgcggg 42969420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 7819819 - 7819869
Alignment:
Q  163 tgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
    ||||||||||||||||||  |||| |  |||||||||||||||||||||||    
T  7819819 tgggtattttttgcgggtgcccattggacttgggtccaattgtcatcccta 7819869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 17153878 - 17153824
Alignment:
Q  163 tgggtattttttgcgggtatccatcgagcttgggtccaattgtcatccctatcca 217  Q
    |||||||||||||||||||| |||  |||||| ||||||||| ||| ||||||||    
T  17153878 tgggtattttttgcgggtattcataaagcttgagtccaattgccattcctatcca 17153824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 39766858 - 39766757
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||| || ||||||  |||||||| |||||||||||||| ||||||| |||||||| | |||||| || |||||||  |||||| |||  ||||    
T  39766858 aaaaataaattaaatatttactatattatataaatatgtatatgc-gggttgcggggctgggtagtatagtgcccttacccgcacccatacccaaataaa 39766760  T
Q  100 ttt 102  Q
    |||    
T  39766759 ttt 39766757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 2e-56; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 46181520 - 46181731
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||  |||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  46181520 aaaaataaataaataatttatgatattatataaatatgtatatgcgggtatgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 46181619  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | |||| |||||| |||| ||| ||||| ||||||| ||||| |||||||||||||||||||||||||| | |  |||||||    
T  46181620 tttgtgggtattacccgtacccgtgcccagacccataaaagcggggttttaccctacccattgtgggtattttttgcgggtatccattgggtctgggtcc 46181719  T
Q  200 aattgtcatccc 211  Q
    ||||| ||||||    
T  46181720 aattgccatccc 46181731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 3551340 - 3551135
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||       ||||| | ||||||||| ||||||||||||||| ||||||||||    
T  3551340 aaaaataaataaattatctatgatattatataaatatgtatatgcgggg-------ctgggtagtatagtacccttacccgtgcccatacccatttaaat 3551248  T
Q  101 ttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcca 200  Q
    ||| |||||||||||||| |||| |||| | |||||||| ||||| ||||||| ||||| |||||||||||||||| |||| |||||| || ||||||||    
T  3551247 ttgcgggtattacccagacccgtgcccaaacccatgaaagcggggttttaccctacccattgtgggtattttttgcaggtacccatcgggcctgggtcca 3551148  T
Q  201 attgtcatcccta 213  Q
    |||||||||||||    
T  3551147 attgtcatcccta 3551135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 16567874 - 16568087
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||  |||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  16567874 aaaaataaataaataatttatgatattatataaatatgtatatgcgggtatgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 16567973  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | |||| |||||| |||| ||| ||||| ||||||| ||||| |||||||||||||||| ||||||||| | |  |||||||    
T  16567974 tttgtgggtattacccgtacccgtgcccagacccataaaagcggggttttaccctacccattgtgggtattttttgcaggtatccattgggtctgggtcc 16568073  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  16568074 aattgccatcccta 16568087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 16597788 - 16597575
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||  |||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  16597788 aaaaataaataaataatttatgatattatataaatatgtatatgcgggtatgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 16597689  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||  | |||| |||||| |||| ||| ||||| ||||||| ||||| |||||||||||||||| ||||||||| | |  |||||||    
T  16597688 tttgtgggtattacccgtacccgtgcccagacccataaaagcggggttttaccctacccattgtgggtattttttgcaggtatccattgggtctgggtcc 16597589  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  16597588 aattgccatcccta 16597575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 213
Target Start/End: Complemental strand, 33067288 - 33067076
Alignment:
Q  2 aaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    |||| |||||||||| ||||||||||| | ||||||||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||||||||||||||    
T  33067288 aaaaaaaataaattacttatgatattaaataaatatgtatatgcggggttgcggggctgggcagtatagtacccttatccgtgcccatatccatttaaat 33067189  T
Q  101 ttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcca 200  Q
    ||||||||||||||| || |||||| |||| |||||| |  |||| ||||||| ||||| | |||||||||| ||||||||| ||| |  | ||||||||    
T  33067188 ttgtgggtattacccggacccgtcctcagacccatgatagaggggttttaccctacccattatgggtattttatgcgggtattcattggacctgggtcca 33067089  T
Q  201 attgtcatcccta 213  Q
    |||||||||||||    
T  33067088 attgtcatcccta 33067076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 12920805 - 12920619
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||||||||||| ||||||| |||| |||| |||||||||||||||  |||||||     
T  12920805 aaaaataaataaataatttatgatactatataaatatgtatatgcggggttgcgggtctgggcagtataatacccttacccgtgcccatactcatttaat 12920706  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccat 186  Q
    ||||||||||||||||  | |||| ||||||||||| ||| ||||| ||||||| ||||| ||||||||||||||||||||||||||    
T  12920705 tttgtgggtattacccgtacccgtgcccagatccataaaagcggggttttaccctacccattgtgggtattttttgcgggtatccat 12920619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 43224625 - 43224838
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| ||||||||||| | ||||||||||||||||||||||||| ||||||| ||||||||| ||| |||||||||||||||||||||    
T  43224625 aaaaataaataaattacttatgatattaaataaatatgtatatgcggggttgcggggctgggcagtatagtacccttatccgtgcccatatccatttaaa 43224724  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    || |||||||||||||  ||||||| ||||| |||||| |  || | ||||||| ||||| |||||||||||| ||| ||||||||| |    |||||||    
T  43224725 ttcgtgggtattacccgaatccgtctccagacccatgatagtggagttttaccctacccattgtgggtattttatgcaggtatccattggatctgggtcc 43224824  T
Q  200 aattgtcatcccta 213  Q
    ||||||||||||||    
T  43224825 aattgtcatcccta 43224838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 5022996 - 5022822
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||     
T  5022996 aaaaataaataaataatttatgatattatataaatatgtatatggggggttgcgggtctgggcagtatagtacccttacccgtgcccatatccatttaat 5022897  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtatttttt 174  Q
    ||||||||||||||||  | |||| |||||| |||| ||| ||||| ||||||| ||||| ||||||||||||||    
T  5022896 tttgtgggtattacccgtacccgtgcccagacccataaaagcggggttttaccctacccattgtgggtatttttt 5022822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 10066064 - 10065884
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||| | ||| ||||||||||| |||||| |     
T  10066064 aaaaataaataaataatttatgatattatataaatatgtatatgcggggttgcgggtctgggcagtatagtatccttatccgtgcccatacccattttat 10065965  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggt 180  Q
    ||||||||||||||||  | |||| |||||| |||||||| ||||| ||||||| ||||| ||||||||||||||||||||    
T  10065964 tttgtgggtattacccgcacccgtgcccagacccatgaaagcggggttttaccctacccattgtgggtattttttgcgggt 10065884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 27398896 - 27399111
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||  | |||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  27398896 aaaaataaataaataatttatgatattatataaatatgtatatgcgggtctacgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 27398995  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||| ||||||||| ||  |||||| |||||| |||| ||| ||||| ||||||| |||||||||||||||||||||||| ||||||| |    |||||||    
T  27398996 tttatgggtattatccgtatccgtgcccagacccataaaagcggggttttaccctacccactgtgggtattttttgcggatatccattggatatgggtcc 27399095  T
Q  200 aattgtcatccctatc 215  Q
    ||||| | ||||||||    
T  27399096 aattgccgtccctatc 27399111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 31455207 - 31455412
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||        ||||||| ||||||||| ||||||||||||||| |||||||| |    
T  31455207 aaaaataaataaataatttatgatattatataaatatgtatatgcgggt-------ctgggcagtatagtacccttacccgtgcccatacccatttaatt 31455299  T
Q  101 ttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcca 200  Q
    |||||||||||||||  | |||| ||||||||||| ||| || || ||||||| || || |||||||||||||||||||||||||| | |  ||||||||    
T  31455300 ttgtgggtattacccgtacccgtgcccagatccataaaagcgaggttttaccctactcattgtgggtattttttgcgggtatccattgggtctgggtcca 31455399  T
Q  201 attgtcatcccta 213  Q
    |||||||||||||    
T  31455400 attgtcatcccta 31455412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 39414872 - 39415085
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||  |||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  39414872 aaaaataaataaataatttatgatattatataaatatgtatatgcgggtctgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 39414971  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||| ||||||||  | |||| | |||| |||| ||| ||||| ||||| | ||||| |||||||||||||||||||||||||| | |  ||||||     
T  39414972 tttgtggatattacccgtacccgtgctcagacccataaaagcggggttttacgctacccattgtgggtattttttgcgggtatccattgggtctgggtct 39415071  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  39415072 aattgccatcccta 39415085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 43702223 - 43702003
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggc------aatatagtacctttacccgtgcccatatcca 93  Q
    |||||||||||||||| ||||||||||| | ||||||||||||||||||||| ||| |||||       | |||| ||||||||||||||||||||||||    
T  43702223 aaaaataaataaattacttatgatattaaataaatatgtatatgcggggttgtggggctggggttggatagtataatacctttacccgtgcccatatcca 43702124  T
Q  94 tttaaatttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagctt 193  Q
    |||||||| ||||||||||||| || ||||||||| | |||||| | | ||| ||||||| ||||| |||||||||||| ||||||||||||| || |||    
T  43702123 tttaaattcgtgggtattacccggacccgtccccaaacccatgatagcagggttttaccctacccattgtgggtattttatgcgggtatccattgaactt 43702024  T
Q  194 gggtccaattgtcatccctat 214  Q
    ||||| ||||| |||||||||    
T  43702023 gggtctaattgccatccctat 43702003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 17172013 - 17171801
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| ||||||| ||||||| ||||| | ||||||||| ||||||||| ||||| ||||| |||    
T  17172013 aaaaataaataaagtatttattatattatataaatatgtacatgcggg-ttgcggggctgggtagtatagtacccttacccgtgtccatacccattaaaa 17171915  T
Q  100 tttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| ||||| ||||||  | |||| |||| |||||||||| ||||| ||||||| ||||| ||||||||||||||||||||||||||||||  ||||||    
T  17171914 tttgcgggtaattaccct-acccgtgcccatatccatgaaagcggggttttaccctacccattgtgggtattttttgcgggtatccatcgagtctgggtc 17171816  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||||||||    
T  17171815 caattgccatcccta 17171801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 2 - 186
Target Start/End: Complemental strand, 35092543 - 35092360
Alignment:
Q  2 aaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||  ||||||| ||||||| ||||||||| |||||||||||||||||||||||| |    
T  35092543 aaaataaataaataatttatgatattatataaatatgtatatgcgg--ttgcgggtctgggcagtatagtacccttacccgtgcccatatccatttaatt 35092446  T
Q  101 ttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccat 186  Q
    |||||||||||||||  | || | |||||| |||| ||| ||||| ||||||| ||||| ||||| |||||||||| |||||||||    
T  35092445 ttgtgggtattacccgtaccctttcccagacccataaaagcggggttttaccctacccattgtggatattttttgcaggtatccat 35092360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 42284812 - 42285025
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| ||||||||||| | ||||||||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||  ||||| |||    
T  42284812 aaaaataaataaattacttatgatattaaataaatatgtatatgcggggttgcgggtctgggcagtatagtacccttatccgtgcccatgcccattaaaa 42284911  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    |||||||||||||||| ||||| |||||||| |||||| | ||||| ||||| |  |||| ||| | |||||| || |||||| ||| | || |||||||    
T  42284912 tttgtgggtattacccggatccatccccagacccatgatagcggggttttactctccccattgtagctattttatgtgggtattcattgggcctgggtcc 42285011  T
Q  200 aattgtcatcccta 213  Q
    || |||||||||||    
T  42285012 aaatgtcatcccta 42285025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 5 - 214
Target Start/End: Original strand, 46783379 - 46783589
Alignment:
Q  5 ataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttg 103  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| || ||||||||| |||||||||||||||||||||||| |||     
T  46783379 ataaataaataatttatgatattatataaatatgtatatgcggggttgcgggtctggacagtatagtacccttacccgtgcccatatccatttaatttta 46783478  T
Q  104 tgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaatt 203  Q
    |||||||||||   | | || |||||| |||| ||| ||||  |||| || | ||| |||| ||||||||||||| || |||| |    |||||||||||    
T  46783479 tgggtattacctgtacctgtgcccagacccataaaagcgggattttatcctatccattgtgagtattttttgcggatacccattggatctgggtccaatt 46783578  T
Q  204 gtcatccctat 214  Q
    |||||||||||    
T  46783579 gtcatccctat 46783589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 19805334 - 19805543
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||||| ||||||| ||||| | ||||||| | |||||||||||| || ||||||||     
T  19805334 aaaaataaataaataatttatgatattatataaatatgtatttgcggg-ttgcgggtctgggtagtatagtatccttacccgtgcccgtacccatttaat 19805432  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||| ||||||||  | |||| ||||||||||| ||| ||||  ||||||| | ||| ||||| ||||||||||||||| |||| |   ||||||||    
T  19805433 tttgtggatattacccgtacccgtgcccagatccataaaagcgggattttaccctatccattgtggatattttttgcgggtacccattggatttgggtcc 19805532  T
Q  200 aattgtcatcc 210  Q
    ||||| |||||    
T  19805533 aattgccatcc 19805543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 3363268 - 3363381
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  3363268 aaaaataaataaataatttatgatattatataaatatgtatatgcggggttgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 3363367  T
Q  100 tttgtgggtattac 113  Q
    ||| ||||| ||||    
T  3363368 tttttgggtgttac 3363381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 25309322 - 25309112
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgg-gctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||||||| |||||||| | ||||| ||||||||| | || | |||||||| ||||||||| |||   || |||||| |||||||||    
T  25309322 aaaaataaataaattatttatcatattatatagatatg-atatgcggg-tagcagtgctgggcagtatagtacccttatatgtacccatacccatttaaa 25309225  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    |||| ||||| |||||||| ||   |||| | |||||||| ||||| ||||| | ||||| |||||||||||||| ||| || |||||||||||||||||    
T  25309224 tttgcgggtaatacccagacccaaacccatacccatgaaagcggggttttactctacccattgtgggtattttttacggatacccatcgagcttgggtcc 25309125  T
Q  200 aattgtcatccct 212  Q
    ||||| |||||||    
T  25309124 aattgccatccct 25309112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 40788104 - 40787892
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| |||| ||||||| |||||||| | ||||||||| ||||||||| ||||| ||||| |||    
T  40788104 aaaaataaataaagtatttattatattatataaatatgtacatgc-gggttgcggggctgggtagtatagtacccttacccgtgtccatacccattaaaa 40788006  T
Q  100 tttg-tgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| |||  |||||||  | ||||  ||| | |||||||| ||||| ||||||| ||||| ||||||||||||||||||||  |||||| |  || |||    
T  40788005 tttgctggtaattaccc-tacccgtgtccatacccatgaaagcggggttttaccctacccattgtgggtattttttgcgggtgcccatcgggtctgagtc 40787907  T
Q  199 caattgtcatcccta 213  Q
    |||||||||||||||    
T  40787906 caattgtcatcccta 40787892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 44301033 - 44301245
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| |||| ||||||| ||| || | | ||||||||| ||||||||| ||||| ||||| |||    
T  44301033 aaaaataaataaagtatttattatattatataaatatgtacatgc-gggttgcggggttgagtagtatagtacccttacccgtgtccatacccattaaaa 44301131  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| |||| |||||||  | || | |||| | ||||||||  |||| ||||||| ||||| |||||||||||||||| |||  |||||| |  ||||||    
T  44301132 tttgcgggtaattaccc-tacccatgcccatacccatgaaagtggggttttaccctacccattgtgggtattttttgcaggtgcccatcgggtctgggtc 44301230  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||||||||    
T  44301231 caattgccatcccta 44301245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 32 - 213
Target Start/End: Original strand, 9477894 - 9478082
Alignment:
Q  32 aaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggtatta------cccagatccgtc 124  Q
    ||||||||||||| ||||||| ||| |||| || | ||||||| ||||||||||||||||| ||||||||| |||| |||||      |||    |||||    
T  9477894 aaatatgtatatgaggggttgtggggctggacagtgtagtacccttacccgtgcccatatcaatttaaattcgtggctattacccgtccccgtccccgtc 9477993  T
Q  125 cccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
    |||||| |||||| | ||||| ||| ||| ||||| ||||| |||||| || |||||||||  | || |||||||||||||||||||||    
T  9477994 cccagacccatgatagcggggtttttccctacccattgtggatattttatgtgggtatccactgggcctgggtccaattgtcatcccta 9478082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 12499361 - 12499151
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||| ||||||| |||||||| | ||||||  |  |||||||||||||| ||||  |||    
T  12499361 aaaaataaataaattatttataatattatataaatacatatatgc-gggttgcggggctgggtagtatagtgtccatacccgtgcccatacccatacaaa 12499263  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| |||| |||||||| | ||   |||||| |||||||| ||||  ||||||  |||||  | ||||||||||||| ||| ||||| | |  ||||||    
T  12499262 tttgcgggtaattacccatacccaagcccagacccatgaaagcgggattttaccatacccatagcgggtattttttgcaggtgtccatagggtctgggtc 12499163  T
Q  199 caattgtcatcc 210  Q
    |||||| |||||    
T  12499162 caattgccatcc 12499151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 33979182 - 33979395
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||| |||||||||||||| |||||||| |||||  |||||||||| ||||||| ||||| | || |||  |  ||||||||| |||| |||| ||||    
T  33979182 aaaaatgaataaattatttataatattatataaatacatatatgcggg-ttgcggggctgggtagtacagtgtccatacccgtgcacatacccatataaa 33979280  T
Q  100 tttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| ||||| ||||||| | ||   ||| ||||||||||| || || ||||||| |||||  | ||||||||||||| |||  |||| | |  ||||||    
T  33979281 tttgcgggtaattacccatacccaagcccggatccatgaaagcgtggttttaccctacccaaagcgggtattttttgcaggtgcccatagggtctgggtc 33979380  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||||||||    
T  33979381 caattgccatcccta 33979395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 36073846 - 36073633
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||  |||||||||||||| ||||||| |||||||| | |||||| || |||||||  |||||| |||| ||||    
T  36073846 aaaaataaataaaatatttattatattatttaaatatgtatatgc-gggttgcggggctgggtagtatagtgcccttacccgcacccatacccatataaa 36073748  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| |||| |||| || |||||   |||  |   |  ||  ||||| ||||||| ||||| |||||||||||||||||||| |||||||  | |||||     
T  36073747 tttgcgggtaattatccggatccaagcccttacatacaaatgcggggttttaccctacccattgtgggtattttttgcgggtgtccatcggacctgggta 36073648  T
Q  199 caattgtcatcccta 213  Q
     ||||| ||||||||    
T  36073647 taattgccatcccta 36073633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 24430127 - 24429915
Alignment:
Q  2 aaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgg-gctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    ||||||||||||||||| || |||||||| ||||||||||||||  | |||||| | | |||| || ||||| ||||||||| |||||| ||||||||||    
T  24430127 aaaataaataaattattcatcatattatataaatatgtatatgc-agattgcggagtttggcagtacagtacttttacccgtacccatacccatttaaat 24430029  T
Q  101 ttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcca 200  Q
    |||  |||| ||| |||| ||   || | | |||| ||| ||||| ||||||| |  || ||  |||||||||||| | || ||||||||  | ||||||    
T  24430028 ttgcaggtaatactcagacccaaacctaaacccataaaagcggggttttaccctattcattgcaggtattttttgcagatacccatcgagtctaggtcca 24429929  T
Q  201 attgtcatccctat 214  Q
    |||| |||||||||    
T  24429928 attgccatccctat 24429915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 38400786 - 38400686
Alignment:
Q  3 aaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaatt 101  Q
    ||||||||||||||||||| |||||||| |||||||| ||| | || |||| |||||| ||||||||  |||||||| || || ||||||||||||||||    
T  38400786 aaataaataaattatttatcatattatataaatatgtttatac-ggattgcggggctgtgcaatataacacctttactcgcgctcatatccatttaaatt 38400688  T
Q  102 tg 103  Q
    ||    
T  38400687 tg 38400686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 26299740 - 26299953
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcg-ggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||||||| |||||||| |||||  |||||||||| ||||  ||||||| | || ||| ||  |||||||||||||| ||||  |||    
T  26299740 aaaaataaataaattatttataatattatataaatacatatatgcggg-ttgcaaggctgggtagtacagtgcccatacccgtgcccatacccatacaaa 26299838  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| |||| |||||||| | ||   |||  | ||||||||  |||| |||| || |||||  | ||||||||||||| ||||||||| |    ||||||    
T  26299839 tttgcgggtaattacccatacccaagcccgaacccatgaaagtggggttttatcctacccatagcgggtattttttgcaggtatccataggatctgggtc 26299938  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||||||||    
T  26299939 caattgccatcccta 26299953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 30391905 - 30392118
Alignment:
Q  2 aaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    |||||||||||||||||||| |||||||| |||||  ||||||| ||||||| ||| |||| | || ||| ||  | ||||||||||||  |||| ||||    
T  30391905 aaaataaataaattatttatcatattatataaatacatatatgc-gggttgcggggttgggtagtacagtgcccatccccgtgcccatactcattcaaat 30392003  T
Q  101 ttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    |||  ||| |||||||| | || |  ||  ||||| |||||||||| ||||||| ||||   | |||||||||||||| ||  | || ||| ||||||||    
T  30392004 ttgcaggtaattacccatacccatgtccgtatccaagaaaacggggttttaccctacccgtagcgggtattttttgcgagtgcctattgagtttgggtcc 30392103  T
Q  200 aattgtcatccctat 214  Q
    ||||| |||||||||    
T  30392104 aattgccatccctat 30392118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 48558438 - 48558225
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||| ||||||| |||||||| | || ||| |   | |||||||| ||| |||||||||    
T  48558438 aaaaataaataaattatttattatattatataaatacatatatgc-gggttgcggggctgggtagtacagtgctcatccccgtgcctatacccatttaaa 48558340  T
Q  100 tttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| |||| |||||||| | || | |||  | ||| |||| ||||| |||| || | |||  | || ||||||||||||||  |||| |||  ||||||    
T  48558339 tttgcgggtaattacccatacccatgcccgtacccaagaaagcggggtttta-cctatccatagcggatattttttgcgggtgcccattgagtctgggtc 48558241  T
Q  199 caattgtcatccctat 214  Q
    |||||| |||||||||    
T  48558240 caattgccatccctat 48558225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 9223990 - 9224098
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||||||||||| |||||||| |||||  | ||||| ||||||| |||||||| | || ||| ||  || ||||||||||| |||| ||||    
T  9223990 aaaaataaataaattatttataatattatataaatacatttatgc-gggttgcggggctgggtagtacagtgcccatatccgtgcccatacccatataaa 9224088  T
Q  100 tttgtgggta 109  Q
    |||| |||||    
T  9224089 tttgcgggta 9224098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 38398244 - 38398144
Alignment:
Q  3 aaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaatt 101  Q
    ||||||||||||||||||| |||||||| |||||||| ||| | || |||| ||| || ||||||||  |||||||| || || |||| |||||||||||    
T  38398244 aaataaataaattatttatcatattatataaatatgtttatac-ggattgcggggatgtgcaatataacacctttactcgcgctcatacccatttaaatt 38398146  T
Q  102 tg 103  Q
    ||    
T  38398145 tg 38398144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 4912529 - 4912481
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcgggg 49  Q
    ||||||||||||||||||||| |||||| | || |||||||||||||||    
T  4912529 aaaaataaataaattatttatcatattacataattatgtatatgcgggg 4912481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 178
Target Start/End: Original strand, 36073030 - 36073204
Alignment:
Q  4 aataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaattt 102  Q
    |||| ||||||||||||| |||| ||| ||| |  |||||||||| ||||||| ||||  | |||||| ||  ||||||||||  || || |||||||||    
T  36073030 aatatataaattatttataatat-atataaaaacatatatgcggg-ttgcggggctggatagtatagtgcccatacccgtgccggtacccttttaaattt 36073127  T
Q  103 gtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgg 178  Q
    | ||||| ||||||  |||| | |||| |||||||||| ||||| ||||||| ||||| |  |||||||||||||||    
T  36073128 gcgggtaattacccgaatccatgcccatatccatgaaagcggggttttaccctacccattacgggtattttttgcgg 36073204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 213
Target Start/End: Original strand, 45116297 - 45116385
Alignment:
Q  125 cccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
    |||| |||||||||| ||||| ||||||| | ||| || ||||||||||| |||||  |||||  || |||||| ||||||||||||||    
T  45116297 cccatatccatgaaagcggggttttaccctatccattgcgggtattttttacgggtgcccatcaggcctgggtctaattgtcatcccta 45116385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 9354931 - 9354884
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggg 48  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||||||    
T  9354931 aaaaataaataaattatttataatattatataaatacatatatgcggg 9354884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 16562259 - 16562306
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggg 48  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||||||    
T  16562259 aaaaataaataaattatttataatattatataaatacatatatgcggg 16562306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 16603403 - 16603356
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggg 48  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||||||    
T  16603403 aaaaataaataaattatttataatattatataaatacatatatgcggg 16603356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 28067014 - 28066967
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggg 48  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||||||    
T  28067014 aaaaataaataaattatttatcatattatataaatacatatatgcggg 28066967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164 (Bit Score: 107; Significance: 2e-53; HSPs: 2)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 6919 - 6706
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  6919 aaaaataaataaataatttatgatattatataaatatgtatatgcggggttgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 6820  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatcca-tcgagcttgggtc 198  Q
    ||||||||||||||||  | ||||  ||||| |||| ||||||| | ||||||| ||||| ||||| ||||||||||||||| ||| | |||| ||||||    
T  6819 tttgtgggtattacccgtacccgtgtccagacccataaaaacggagttttaccctacccattgtggatattttttgcgggtacccattggagc-tgggtc 6721  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||||||||    
T  6720 caattgccatcccta 6706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 14800 - 14587
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  14800 aaaaataaataaataatttatgatattatataaatatgtatatgcggggttgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 14701  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatcca-tcgagcttgggtc 198  Q
    ||||||||||||||||  | ||||  ||||| |||| ||||||| | ||||||| ||||| ||||| ||||||||||||||| ||| | |||| ||||||    
T  14700 tttgtgggtattacccgtacccgtgtccagacccataaaaacggagttttaccctacccattgtggatattttttgcgggtacccattggagc-tgggtc 14602  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||||||||    
T  14601 caattgccatcccta 14587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 1e-51; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 31071095 - 31071302
Alignment:
Q  7 aaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtg 105  Q
    |||||||| ||||||||||||||| ||||||||| ||| ||||||||||| ||||||| ||||||||| ||||||||||||||| |||||||| ||||||    
T  31071095 aaataaataatttatgatattatataaatatgtagatgtggggttgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttgtg 31071194  T
Q  106 ggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgt 205  Q
    ||||||||||  | |||| |||||| |||  ||| ||||| ||||||| ||||| ||||||||||||||||||||| |||| | | |||||||||||||     
T  31071195 ggtattacccgtacccgtgcccagacccacaaaagcggggttttaccctacccattgtgggtattttttgcgggtacccattgggtttgggtccaattgc 31071294  T
Q  206 catcccta 213  Q
    ||||||||    
T  31071295 catcccta 31071302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 33331908 - 33332121
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| ||||||| |||||||||  |||||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  33331908 aaaaataaataaataatttatgatattatataaatatgcatatgcgggtctgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaat 33332007  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||| ||||||||||||  | |||| |||||| |||| ||| ||||| ||||||| ||||| | |||||||||||||||||||||||| | |  |||||||    
T  33332008 tttttgggtattacccgtacccgtgcccagacccataaaagcggggttttaccctacccattatgggtattttttgcgggtatccattgggtctgggtcc 33332107  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  33332108 aattgccatcccta 33332121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 7808063 - 7808276
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||||||| | |||||||||| ||||||||| ||||||||||||||| |||||||||    
T  7808063 aaaaataaataaattacttatgatattaaagaaatatgtatatgcggggttacagggctgggcagtatagtacccttacccgtgcccatacccatttaaa 7808162  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    || |||||||||| ||  | ||||| ||||| |||||| | ||||  ||||||| ||||| ||||| |||||| ||||||||| ||| || | |||||||    
T  7808163 ttcgtgggtattatccgaacccgtctccagacccatgatagcgggattttaccctacccattgtggatattttatgcgggtattcattgaacatgggtcc 7808262  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  7808263 aattgccatcccta 7808276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 33328896 - 33329109
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| ||||||| |||||||||  || ||| ||||||| ||||||||| ||||||||||||||| ||||||||     
T  33328896 aaaaataaataaataatttatgatattatataaatatgcatatgcgggtctgggggtctgggcagtatagtacccttacccgtgcccatacccatttaat 33328995  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||| ||||||||||||  | |||| |||||| |||| ||| ||||| ||||||| ||||| | |||||||||||||||||||||||| | |  |||||||    
T  33328996 tttttgggtattacccgtacccgtgcccagacccataaaagcggggttttaccctacccattatgggtattttttgcgggtatccattgggtctgggtcc 33329095  T
Q  200 aattgtcatcccta 213  Q
    ||||| ||||||||    
T  33329096 aattgccatcccta 33329109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 24446914 - 24446702
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| ||||||| ||||||| ||||| | ||||||||| ||||||||| ||||| ||||| |||    
T  24446914 aaaaataaataaagtatttattatattatataaatatgtacatgcggg-ttgcggggctgggtagtatagtacccttacccgtgtccatacccattaaaa 24446816  T
Q  100 tttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| ||||| ||||||  | |||| |||| |||||||||| ||||| ||||||| ||||| ||||||||||||||||||||||||||||||  ||||||    
T  24446815 tttgcgggtaattaccct-acccgtgcccatatccatgaaagcggggttttaccctacccattgtgggtattttttgcgggtatccatcgagtctgggtc 24446717  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||||||||    
T  24446716 caattgccatcccta 24446702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 13532743 - 13532530
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggct-gggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||  |||| | | ||||| ||||||||| ||||||||||||||||||||||||     
T  13532743 aaaaataaataaataatttatgatattatataaatatgtatatgcgggtctgcgagtttgggcagtatagtacccttacccgtgcccatatccatttaat 13532644  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||| ||||| ||  | |||| |||||| | || ||| ||||| ||||||| ||| | |||||||||||||||||||||||||| | |  ||||||     
T  13532643 tttgtggatattatccgtacccgtgcccagacctataaaagcggggttttaccctaccaattgtgggtattttttgcgggtatccattgggtctgggtct 13532544  T
Q  200 aattgtcatcccta 213  Q
    ||||||||||||||    
T  13532543 aattgtcatcccta 13532530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 18 - 213
Target Start/End: Complemental strand, 1329354 - 1329158
Alignment:
Q  18 ttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggtattaccca 116  Q
    |||| |||||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| |||||||| ||| ||||||||||||     
T  1329354 ttataatattatataaatatgtatatgcggggttgcgggtctgggcagtatagtacccttacccgtgcccatacccatttaattttatgggtattacccg 1329255  T
Q  117 gatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
     | ||||  ||||| |||| |||  |||| ||||||| ||||| |||||||||||||||||||||||||| |||  ||||| |||||| ||||||||    
T  1329254 tacccgtgtccagacccataaaagtggggttttaccctacccattgtgggtattttttgcgggtatccattgagtatgggttcaattgccatcccta 1329158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 20691390 - 20691215
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| |||||| |     
T  20691390 aaaaataaataaataatttatgatattatataaatatgtatatgcggggttgcgggtctgggcagtatagtacccttacccgtgcccatacccattttat 20691291  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttg 175  Q
    ||||||  ||||||||  | |||| |||||| |||| ||| | ||| ||||||| ||||| |||||||||||||||    
T  20691290 tttgtgtttattacccgcacccgtgcccagacccataaaagcagggttttaccctacccattgtgggtattttttg 20691215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 6337494 - 6337706
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    |||||||||||| |||||||  |||||||| ||||||||||||||||||||| ||| ||||| | |||| |||| ||||||||||||||| ||||   ||    
T  6337494 aaaaataaataa-ttatttaaaatattatataaatatgtatatgcggggttgtggggctgggtagtataatacccttacccgtgcccatacccataacaa 6337592  T
Q  100 tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtcc 199  Q
    ||||||||||||||||||| || |  ||| | |||||||| ||||| ||||||| ||||| ||||||| |||||||||||||||||| | |  ||| |||    
T  6337593 tttgtgggtattacccagacccatgtccatacccatgaaagcggggttttaccctacccattgtgggttttttttgcgggtatccattgggtctggatcc 6337692  T
Q  200 aattgtcatcccta 213  Q
    ||||||||||||||    
T  6337693 aattgtcatcccta 6337706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 213
Target Start/End: Complemental strand, 1221484 - 1221295
Alignment:
Q  24 tattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggta-ttacccagatcc 121  Q
    ||||||| ||||||||| ||||||| ||||||| ||||| | ||||||||| ||||||||| ||||| ||||| ||||||| ||||| ||||||  | ||    
T  1221484 tattatataaatatgtacatgcggg-ttgcggggctgggtagtatagtacccttacccgtgtccatacccattaaaatttgcgggtaattaccct-accc 1221387  T
Q  122 gtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
    || |||| |||||||||| ||||| ||||||| ||||| ||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  1221386 gtgcccatatccatgaaagcggggttttaccctacccattgtgggtattttttgcgggtatccatcgagtctgggtccaattgccatcccta 1221295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 12429730 - 12429930
Alignment:
Q  11 aaattatttatgatattatacaaatatgtatatgcggggttgcg-ggctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggta 109  Q
    |||||| ||||||||||| | |||||||||||||||||||| || ||||||  | ||||||||| ||| ||||||||||| | ||||||||| || ||||    
T  12429730 aaattacttatgatattaaataaatatgtatatgcggggttacgtggctggatagtatagtacccttatccgtgcccatacctatttaaattcgttggta 12429829  T
Q  110 ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatc 209  Q
    |||||||||||| || ||||| |||||  | |  |  ||||| | || || ||||| |||||| ||| ||||||||| || | |||||| ||||||||||    
T  12429830 ttacccagatccatctccagacccatggtagcatgattttactctactcattgtggatattttatgcaggtatccattgaacatgggtcgaattgtcatc 12429929  T
Q  210 c 210  Q
    |    
T  12429930 c 12429930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 60 - 217
Target Start/End: Complemental strand, 31783752 - 31783596
Alignment:
Q  60 ggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaaccca 159  Q
    |||| ||||||||| ||||||||||||||| |||||||| ||||||||||||||||  | || | |||||| |||| ||| ||||| ||||||| ||  |    
T  31783752 ggcagtatagtacccttacccgtgcccatacccatttaattttgtgggtattacccgtacccatgcccagacccataaaagcggggttttaccctactaa 31783653  T
Q  160 ctgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatccctatcca 217  Q
     ||||||||||||| ||| ||| |||| |    ||| |||||||||||||||||||||    
T  31783652 ttgtgggtattttt-gcgagtacccattggatctggatccaattgtcatccctatcca 31783596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 28770145 - 28770303
Alignment:
Q  54 gggctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtgggtattacccagatccgtccccagatccatgaaaacggggctttaccc 153  Q
    |||||||| | ||||||||| ||||||||| ||||| ||||  ||||||||||||||||||| || | ||  ||| | | |||||| ||||  ||||||     
T  28770145 gggctgggtagtatagtacccttacccgtgtccatacccata-aaatttgtgggtattacccggacctgtgtccatacctatgaaagcgggattttacca 28770243  T
Q  154 aacccactgtgggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
     ||||| ||||| |||||||||||||||| ||| | | ||||||||||||| ||||||||    
T  28770244 tacccattgtggatattttttgcgggtattcattgggtttgggtccaattgccatcccta 28770303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 29641262 - 29641192
Alignment:
Q  5 ataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacct 74  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||  |||||| ||||||||||    
T  29641262 ataaataaataatttatgatattatataaatatgtatatgcggggttgcgggtttgggcagtatagtacct 29641192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 29640506 - 29640385
Alignment:
Q  66 atagtacctttacccgtgcccatatccatttaaa-tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtg 164  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||||| ||  | |||| | |||| | || ||| ||||| ||||||| ||||| ||||    
T  29640506 atagtacccttacccgtgcccatacccatttaaattttgtgggtattatccgtacccgtgctcagacctataaaagcggggttttaccctacccattgtg 29640407  T
Q  165 ggtattttttgcgggtatccat 186  Q
    | ||||||||||||||| ||||    
T  29640406 gatattttttgcgggtacccat 29640385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 31511441 - 31511390
Alignment:
Q  5 ataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg 56  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  31511441 ataaataaataatttatgatattatataaatatgtatatgcggggttgcggg 31511390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 31510676 - 31510555
Alignment:
Q  66 atagtacctttacccgtgcccatatccatttaaa-tttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtg 164  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||||| |   | |||| | |||| | || ||| ||||| ||||||| ||||| ||||    
T  31510676 atagtacccttacccgtgcccatacccatttaaattttgtgggtattatctgtacccgtgctcagacctataaaagcggggttttaccctacccattgtg 31510577  T
Q  165 ggtattttttgcgggtatccat 186  Q
    | ||||||||||||||| ||||    
T  31510576 gatattttttgcgggtacccat 31510555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 31538592 - 31538497
Alignment:
Q  3 aaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatt 101  Q
    ||||||||||||||||||| |||||||| |||||||||||||| |||||||||| || ||||||||    | ||||||||| | |||| |||||||||||    
T  31538592 aaataaataaattatttatcatattatataaatatgtatatgc-gggttgcgggacttggcaatat----catttacccgtactcatacccatttaaatt 31538498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 33959943 - 33959841
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgc-gggctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| |||  ||||||| |||||| | | ||||||||| ||||||||  ||||||||||| |||    
T  33959943 aaaaataaataaagtatttattatattatataaatatgtacatg-tgggttgcggggctgagtagtatagtacccttacccgtatccatatccattaaaa 33959845  T
Q  100 tttg 103  Q
    ||||    
T  33959844 tttg 33959841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 76 - 214
Target Start/End: Complemental strand, 9061830 - 9061691
Alignment:
Q  76 tacccgtgcccatatccatttaaatttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtatttttt 174  Q
    |||||||||||||| |||| |||||||| ||||| ||||||| | ||   ||| || |||||||| ||||| ||||||| |||||  | |||||||||||    
T  9061830 tacccgtgcccatacccatataaatttgcgggtaattacccatacccaaacccggacccatgaaagcggggttttaccctacccatagcgggtatttttt 9061731  T
Q  175 gcgggtatccatcgagcttgggtccaattgtcatccctat 214  Q
    ||||||  |||| |    |||||||||||| |||||||||    
T  9061730 gcgggtgcccataggatctgggtccaattgccatccctat 9061691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 6799190 - 6799143
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggg 48  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||||||    
T  6799190 aaaaataaataaattatttataatattatataaatacatatatgcggg 6799143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 91; Significance: 6e-44; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 26949 - 27161
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||||||| ||||||| ||||||| ||||| | ||||||||| ||||||||  ||||| ||||| |||    
T  26949 aaaaataaataaagtatttattatattatataaatatgtacatgcggg-ttgcggggctgggtagtatagtacccttacccgtatccatacccattaaaa 27047  T
Q  100 tttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| ||||| ||||||  | |||| |||| |||||||||| ||||| ||||||| ||||| ||||||||||||||||||||||||||||||  ||||||    
T  27048 tttgcgggtaattaccct-acccgtgcccatatccatgaaagcggggttttaccctacccattgtgggtattttttgcgggtatccatcgagtctgggtc 27146  T
Q  199 caattgtcatcccta 213  Q
    |||||| ||||||||    
T  27147 caattgccatcccta 27161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 7 - 186
Target Start/End: Complemental strand, 5676 - 5496
Alignment:
Q  7 aaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaatttgtg 105  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||||| |   ||||||| ||||||||| |||||||||||||||||||||||| ||||||    
T  5676 aaataaataatttatgatattatataaatatgtataagcggggttgtgcctctgggcagtatagtacccttacccgtgcccatatccatttaattttgtg 5577  T
Q  106 ggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccat 186  Q
    |||||||||| || |||| |||||| |||| |||  |||  ||||||| || || ||||| |||||||| |||||| ||||    
T  5576 ggtattacccggacccgtacccagacccataaaagtgggattttaccctactcattgtggatattttttacgggtacccat 5496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 73; Significance: 4e-33; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 240278 - 240064
Alignment:
Q  1 aaaaataaataaattatttatgatat--tatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccattta 97  Q
    |||||||||||||| |||||||||||  |||| ||||||||||||||||| ||||||| ||||| | ||||||||| |||||||||||| || |||||||    
T  240278 aaaaataaataaataatttatgatatattatataaatatgtatatgcggg-ttgcgggtctgggtagtatagtacccttacccgtgcccgtacccattta 240180  T
Q  98 aatttgtgggtattacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggt 197  Q
    | ||||||||||||||||  | ||||  |||||||||  ||| ||||  ||||||| | ||| ||||| ||||||||| |||||||||| |    |||||    
T  240179 attttgtgggtattacccgtacccgtgtccagatccacaaaagcgggattttaccctatccattgtggatattttttgtgggtatccattggatctgggt 240080  T
Q  198 ccaattgtcatcccta 213  Q
    ||||||| ||||||||    
T  240079 ccaattgccatcccta 240064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 221739 - 221695
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgc 45  Q
    ||||||||||||| ||||||| |||||||| ||||||||||||||    
T  221739 aaaaataaataaaatatttattatattatataaatatgtatatgc 221695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 250518 - 250731
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaa 99  Q
    ||||||||||||| ||||||| |||||||  ||||||||||||| ||| ||||||| ||| | | |||||| || |||||||  || ||| ||| |||||    
T  250518 aaaaataaataaagtatttattatattatgtaaatatgtatatgtggg-ttgcggggctgagtagtatagtgcccttacccgcacctatacccacttaaa 250616  T
Q  100 tttgtgggta-ttacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttgcgggtatccatcgagcttgggtc 198  Q
    |||| ||||| |||||  || ||   |||| | |||||||| ||||| ||||||  ||| | || ||||||||||||||||| ||||| | || ||||||    
T  250617 tttgcgggtaattaccttgacccaagcccatacccatgaaagcggggttttaccataccaattgcgggtattttttgcgggtgtccattgggcctgggtc 250716  T
Q  199 caattgtcatcccta 213  Q
    |||||||||||||||    
T  250717 caattgtcatcccta 250731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 8128 - 8231
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaa--atatgtatatgcggggttgcgggct-gggcaatatagtacctttacccgtgcccatatccattta 97  Q
    ||||||||||||||||||||||| |||||| ||  |||||||||||| |||||||||| | || || ||||||||  ||||||| | ||||| |||||||    
T  8128 aaaaataaataaattatttatgacattatataaatatatgtatatgc-gggttgcggggtaggacattatagtactcttacccgcgtccatacccattta 8226  T
Q  98 aattt 102  Q
    |||||    
T  8227 aattt 8231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0938 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0938
Description:

Target: scaffold0938; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 830 - 938
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||| || |   |||||||| || | |   ||  |||||||||||||||||||||||||    
T  830 aaaaataaataaattatttatcatattatataaatacatatatgcaggttgtggggctgggtaaaacaaggccgatacccgtgcccatatccatttaaat 929  T
Q  101 ttgtgggta 109  Q
    ||| |||||    
T  930 ttgcgggta 938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0602 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0602
Description:

Target: scaffold0602; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 5306 - 5405
Alignment:
Q  4 aataaataaattatttatgatattatacaaatatgtatatgcggggttgcggg-ctgggcaatatagtacctttacccgtgcccatatccatttaaattt 102  Q
    |||||||||||||||||| || ||||| |||||||||||||| |||||| |||  |||||||||||||||| |||  ||| || ||| | ||||||||||    
T  5306 aataaataaattatttatcattttatataaatatgtatatgc-gggttgtgggattgggcaatatagtacccttattcgtacctataccaatttaaattt 5404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 23622 - 23514
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||| || |   |||||||| || | |   ||  |||||||||||||||||||||||||    
T  23622 aaaaataaataaattatttatcatattatataaatacatatatgcaggttgtggggctgggtaaaacaaggccgatacccgtgcccatatccatttaaat 23523  T
Q  101 ttgtgggta 109  Q
    ||| |||||    
T  23522 ttgcgggta 23514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 33790 - 33682
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggggttgcgggctgggcaatatagtacctttacccgtgcccatatccatttaaat 100  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||| || |   |||||||| || | |   ||  |||||||||||||||||||||||||    
T  33790 aaaaataaataaattatttatcatattatataaatacatatatgcaggttgtggggctgggtaaaacaaggccgatacccgtgcccatatccatttaaat 33691  T
Q  101 ttgtgggta 109  Q
    ||| |||||    
T  33690 ttgcgggta 33682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 20536 - 20584
Alignment:
Q  165 ggtattttttgcgggtatccatcgagcttgggtccaattgtcatcccta 213  Q
    |||||||||||| ||| ||||||||| |||||| |||||||||||||||    
T  20536 ggtattttttgcaggtgtccatcgagtttgggttcaattgtcatcccta 20584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 175
Target Start/End: Complemental strand, 12765 - 12670
Alignment:
Q  81 gtgcccatatccatttaaatttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttg 175  Q
    ||||||||| |||||||||||||||||| |||||||| | ||   ||| || |||||||| ||||| ||||||| |||||  | ||||||||||||    
T  12765 gtgcccatacccatttaaatttgtgggtaattacccatacccaaacccggacccatgaaagcggggttttaccctacccatagcgggtattttttg 12670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 175
Target Start/End: Complemental strand, 21600 - 21505
Alignment:
Q  81 gtgcccatatccatttaaatttgtgggt-attacccagatccgtccccagatccatgaaaacggggctttacccaacccactgtgggtattttttg 175  Q
    ||||||||| |||||||||||||||||| |||||||| | ||   ||| || |||||||| ||||| ||||||| |||||  | ||||||||||||    
T  21600 gtgcccatacccatttaaatttgtgggtaattacccatacccaaacccggacccatgaaagcggggttttaccctacccatagcgggtattttttg 21505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 109760 - 109713
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcggg 48  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||||||    
T  109760 aaaaataaataaattatttataatattatataaatacatatatgcggg 109713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2338 - 2384
Alignment:
Q  1 aaaaataaataaattatttatgatattatacaaatatgtatatgcgg 47  Q
    ||||||||||||| ||||||  |||||||| ||||||||||||||||    
T  2338 aaaaataaataaaatatttactatattatataaatatgtatatgcgg 2384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 1098 times since January 2019
Visitors: 5825