View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0818_low_32 (Length: 436)

Name: NF0818_low_32
Description: NF0818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0818_low_32
NF0818_low_32
[»] chr8 (12 HSPs)
chr8 (74-384)||(32002855-32003165)
chr8 (230-385)||(21479294-21479450)
chr8 (192-385)||(25856419-25856612)
chr8 (156-385)||(20736866-20737100)
chr8 (156-385)||(20741735-20741969)
chr8 (156-385)||(20745424-20745658)
chr8 (175-385)||(22160234-22160448)
chr8 (243-383)||(17679163-17679302)
chr8 (245-384)||(6666793-6666935)
chr8 (243-383)||(39841814-39841953)
chr8 (243-376)||(24703006-24703137)
chr8 (306-385)||(22092565-22092646)
[»] scaffold0600 (1 HSPs)
scaffold0600 (74-383)||(9082-9392)
[»] chr1 (16 HSPs)
chr1 (74-436)||(14816905-14817260)
chr1 (131-386)||(1958581-1958837)
chr1 (235-383)||(6200874-6201022)
chr1 (243-385)||(19372031-19372173)
chr1 (175-385)||(35072340-35072551)
chr1 (235-384)||(22430720-22430869)
chr1 (208-385)||(13467493-13467667)
chr1 (208-385)||(13472487-13472661)
chr1 (230-385)||(2339233-2339388)
chr1 (4-68)||(35286055-35286119)
chr1 (208-385)||(31555836-31556009)
chr1 (243-385)||(2388421-2388561)
chr1 (243-383)||(31543769-31543908)
chr1 (140-290)||(1065182-1065335)
chr1 (326-360)||(9296432-9296466)
chr1 (403-435)||(6200833-6200865)
[»] scaffold0001 (2 HSPs)
scaffold0001 (74-385)||(99551-99864)
scaffold0001 (404-436)||(99880-99912)
[»] scaffold0202 (1 HSPs)
scaffold0202 (74-385)||(24437-24748)
[»] scaffold0357 (1 HSPs)
scaffold0357 (75-385)||(9435-9750)
[»] chr4 (19 HSPs)
chr4 (74-385)||(20557025-20557345)
chr4 (175-385)||(3385640-3385856)
chr4 (230-385)||(22708162-22708317)
chr4 (240-385)||(16364999-16365145)
chr4 (175-384)||(9187604-9187821)
chr4 (243-436)||(16723904-16724094)
chr4 (243-385)||(14874148-14874289)
chr4 (196-385)||(12512228-12512418)
chr4 (243-385)||(14921598-14921742)
chr4 (243-385)||(15570879-15571023)
chr4 (243-385)||(15575007-15575151)
chr4 (326-385)||(3831983-3832042)
chr4 (243-386)||(26216823-26216963)
chr4 (74-213)||(8660590-8660717)
chr4 (243-328)||(15898717-15898801)
chr4 (243-384)||(3360520-3360662)
chr4 (243-385)||(8099327-8099468)
chr4 (212-320)||(12509308-12509415)
chr4 (329-385)||(33182693-33182748)
[»] chr7 (22 HSPs)
chr7 (156-383)||(15770051-15770279)
chr7 (230-385)||(42634374-42634530)
chr7 (230-385)||(8814449-8814605)
chr7 (230-385)||(23882696-23882852)
chr7 (175-385)||(34136211-34136424)
chr7 (175-385)||(13267854-13268065)
chr7 (235-385)||(3427795-3427946)
chr7 (243-386)||(27972912-27973054)
chr7 (196-384)||(16269414-16269605)
chr7 (195-385)||(565801-565989)
chr7 (230-385)||(842570-842725)
chr7 (230-385)||(849746-849901)
chr7 (230-385)||(1207750-1207905)
chr7 (243-384)||(5205779-5205919)
chr7 (208-385)||(38413397-38413573)
chr7 (243-384)||(27437794-27437934)
chr7 (243-384)||(4944519-4944659)
chr7 (243-383)||(13835228-13835367)
chr7 (282-385)||(16486170-16486273)
chr7 (243-384)||(29025984-29026123)
chr7 (208-298)||(1958037-1958126)
chr7 (243-385)||(12587673-12587818)
[»] chr6 (24 HSPs)
chr6 (156-383)||(1546012-1546240)
chr6 (131-386)||(22326640-22326895)
chr6 (230-385)||(619259-619415)
chr6 (175-385)||(19716417-19716627)
chr6 (173-383)||(27071368-27071579)
chr6 (235-385)||(27514175-27514326)
chr6 (230-385)||(16820911-16821066)
chr6 (175-385)||(18946527-18946744)
chr6 (243-385)||(20456137-20456279)
chr6 (230-385)||(24146806-24146962)
chr6 (175-340)||(22776345-22776513)
chr6 (240-381)||(20053931-20054071)
chr6 (247-384)||(18437692-18437828)
chr6 (230-381)||(18912381-18912531)
chr6 (235-340)||(20044037-20044142)
chr6 (208-383)||(5990187-5990363)
chr6 (190-385)||(28355893-28356094)
chr6 (190-385)||(28307087-28307289)
chr6 (243-385)||(27054966-27055108)
chr6 (243-386)||(16638001-16638143)
chr6 (208-385)||(15649708-15649883)
chr6 (208-384)||(16582927-16583101)
chr6 (208-384)||(16612279-16612453)
chr6 (305-384)||(25502723-25502801)
[»] scaffold0138 (1 HSPs)
scaffold0138 (156-385)||(11315-11543)
[»] chr2 (14 HSPs)
chr2 (107-384)||(24693119-24693390)
chr2 (74-384)||(24702070-24702374)
chr2 (175-385)||(20278185-20278399)
chr2 (208-385)||(30689540-30689714)
chr2 (243-384)||(3762666-3762805)
chr2 (243-384)||(16277292-16277432)
chr2 (243-385)||(24288938-24289082)
chr2 (243-383)||(35142431-35142570)
chr2 (243-385)||(42570745-42570886)
chr2 (208-383)||(15949270-15949448)
chr2 (243-383)||(20614548-20614687)
chr2 (243-385)||(21856201-21856342)
chr2 (318-385)||(25498514-25498583)
chr2 (243-384)||(21116838-21116978)
[»] chr3 (34 HSPs)
chr3 (173-384)||(15623621-15623833)
chr3 (175-385)||(30092960-30093170)
chr3 (175-385)||(70903-71111)
chr3 (175-384)||(8608944-8609163)
chr3 (230-385)||(8808534-8808690)
chr3 (230-385)||(21611964-21612119)
chr3 (230-385)||(6198412-6198568)
chr3 (186-385)||(11184135-11184339)
chr3 (175-385)||(23285235-23285452)
chr3 (175-385)||(33568619-33568832)
chr3 (140-384)||(12476201-12476450)
chr3 (175-385)||(13108899-13109110)
chr3 (235-385)||(14421576-14421728)
chr3 (140-353)||(14884501-14884723)
chr3 (235-385)||(30017083-30017234)
chr3 (235-384)||(3680514-3680664)
chr3 (235-385)||(15533231-15533382)
chr3 (229-385)||(8620449-8620606)
chr3 (235-385)||(46396602-46396754)
chr3 (175-385)||(12557791-12558009)
chr3 (243-386)||(15681281-15681422)
chr3 (208-384)||(25267263-25267437)
chr3 (243-384)||(10718903-10719043)
chr3 (243-383)||(41002108-41002247)
chr3 (243-383)||(41010890-41011029)
chr3 (230-385)||(26383380-26383535)
chr3 (247-385)||(3241615-3241752)
chr3 (243-362)||(27884274-27884391)
chr3 (243-381)||(14395146-14395284)
chr3 (208-377)||(17929581-17929744)
chr3 (343-386)||(14663493-14663536)
chr3 (305-384)||(8201769-8201849)
chr3 (235-328)||(5952037-5952132)
chr3 (305-384)||(9551439-9551517)
[»] scaffold0068 (1 HSPs)
scaffold0068 (173-385)||(21948-22162)
[»] chr5 (23 HSPs)
chr5 (173-385)||(21691748-21691962)
chr5 (240-385)||(7258069-7258216)
chr5 (140-385)||(25529354-25529599)
chr5 (235-383)||(12391334-12391483)
chr5 (232-384)||(7790829-7790979)
chr5 (175-385)||(20096758-20096978)
chr5 (175-385)||(36451007-36451227)
chr5 (235-385)||(1802134-1802285)
chr5 (208-385)||(20380764-20380938)
chr5 (243-384)||(33841558-33841697)
chr5 (244-384)||(29897499-29897645)
chr5 (243-318)||(37581646-37581720)
chr5 (208-384)||(27230261-27230434)
chr5 (208-386)||(11810052-11810227)
chr5 (208-386)||(12177206-12177381)
chr5 (195-385)||(26085977-26086165)
chr5 (243-384)||(21864058-21864200)
chr5 (235-385)||(22954790-22954942)
chr5 (243-383)||(24961412-24961551)
chr5 (243-385)||(28847624-28847765)
chr5 (305-385)||(23639998-23640078)
chr5 (305-385)||(23832808-23832888)
chr5 (243-384)||(21992463-21992603)
[»] scaffold0362 (1 HSPs)
scaffold0362 (158-385)||(746-969)
[»] scaffold0114 (1 HSPs)
scaffold0114 (173-385)||(30774-30987)
[»] scaffold0155 (1 HSPs)
scaffold0155 (173-384)||(19762-19974)
[»] scaffold0320 (1 HSPs)
scaffold0320 (175-383)||(3452-3665)
[»] scaffold0327 (1 HSPs)
scaffold0327 (230-384)||(14968-15123)
[»] scaffold0435 (1 HSPs)
scaffold0435 (230-385)||(11795-11950)
[»] scaffold0306 (1 HSPs)
scaffold0306 (195-385)||(18399-18590)
[»] scaffold0243 (2 HSPs)
scaffold0243 (145-284)||(17658-17796)
scaffold0243 (329-385)||(17796-17854)
[»] scaffold1197 (1 HSPs)
scaffold1197 (230-385)||(32-188)
[»] scaffold0132 (1 HSPs)
scaffold0132 (230-385)||(32085-32238)
[»] scaffold0014 (2 HSPs)
scaffold0014 (230-385)||(743-897)
scaffold0014 (243-375)||(183328-183460)
[»] scaffold0004 (1 HSPs)
scaffold0004 (251-386)||(191401-191537)
[»] scaffold0183 (1 HSPs)
scaffold0183 (235-385)||(32548-32702)
[»] scaffold0084 (1 HSPs)
scaffold0084 (75-188)||(33172-33285)
[»] scaffold0157 (2 HSPs)
scaffold0157 (196-385)||(8489-8679)
scaffold0157 (212-320)||(11062-11169)
[»] scaffold0019 (1 HSPs)
scaffold0019 (280-385)||(16723-16828)
[»] scaffold0441 (1 HSPs)
scaffold0441 (243-385)||(7211-7358)
[»] scaffold0009 (1 HSPs)
scaffold0009 (140-381)||(152900-153143)
[»] scaffold0029 (1 HSPs)
scaffold0029 (243-385)||(75417-75563)
[»] scaffold0582 (1 HSPs)
scaffold0582 (230-385)||(4389-4544)
[»] scaffold0015 (1 HSPs)
scaffold0015 (243-385)||(165950-166093)
[»] scaffold0125 (1 HSPs)
scaffold0125 (243-385)||(12489-12633)
[»] scaffold0044 (1 HSPs)
scaffold0044 (208-384)||(70724-70899)
[»] scaffold0605 (1 HSPs)
scaffold0605 (208-383)||(4887-5063)
[»] scaffold0027 (1 HSPs)
scaffold0027 (280-383)||(59686-59788)
[»] scaffold0551 (1 HSPs)
scaffold0551 (230-297)||(9354-9420)
[»] scaffold0031 (1 HSPs)
scaffold0031 (194-377)||(28502-28688)
[»] scaffold0002 (1 HSPs)
scaffold0002 (250-383)||(125564-125696)
[»] scaffold0005 (1 HSPs)
scaffold0005 (247-384)||(302241-302375)
[»] scaffold0016 (1 HSPs)
scaffold0016 (305-385)||(19520-19601)
[»] scaffold0389 (1 HSPs)
scaffold0389 (305-385)||(3611-3692)
[»] scaffold0598 (1 HSPs)
scaffold0598 (265-351)||(4242-4330)


Alignment Details
Target: chr8 (Bit Score: 248; Significance: 1e-137; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 74 - 384
Target Start/End: Original strand, 32002855 - 32003165
Alignment:
Q  74 gcttttcgaaggttgaattcagacacgcaagataatccactaacgggttatattccttggtattgcgacacatggggtggtcagccgtaattggaccgtt 173  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||| |||||    
T  32002855 gcttttcgaaagttgaattcaaacacgcaagataatccactaacgggttatattccctggtattgcgacacatggagtggttagccgtaattgggccgtt 32002954  T
Q  174 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaa 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32002955 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgcttttcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaa 32003054  T
Q  274 ctggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttggaaaatgg 372  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||| ||| | ||||||||| ||||||||||||||    
T  32003055 ctggtgtagggctttttgctttaag-aattgtcatcattaataaaaaggtcgttttgatctcgactttgttttcactttgtgcttcttcttggaaaatgg 32003153  T
Q  373 taatacaaaaaa 384  Q
    ||||||||||||    
T  32003154 taatacaaaaaa 32003165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 230 - 385
Target Start/End: Complemental strand, 21479450 - 21479294
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg--tt 327  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||    
T  21479450 ttttcaaaa-aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttactttaagaaattgtcatcattaataaaaaggtcgtttt 21479352  T
Q  328 tgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21479351 tgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 21479294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 192 - 385
Target Start/End: Complemental strand, 25856612 - 25856419
Alignment:
Q  192 actttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttg 291  Q
    |||||||||||||||||||||||||||||||||| |  |||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  25856612 actttttgttcaaataatgtttgtttgttgcttttctcttttcaaa-gaacatcctttcgttccgcccgaggtgaaagtgaactggtgtagggctttttg 25856514  T
Q  292 ctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttt-tcttggaaaatggtaatacaaaaaac 385  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||| |||||||| |||| ||| | ||||||||||||||||||||    
T  25856513 ctttaag-aattgtcatcattaataaaaaggtcgttttgatcccgactttgttttcattttgtgtttttctctggaaaaatggtaatacaaaaaac 25856419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 156 - 385
Target Start/End: Original strand, 20736866 - 20737100
Alignment:
Q  156 agccgtaattggaccgttgttgacgttccttccgctactttt-tgttcaaataatgt--ttgtttgttgctttgcgt-ttttcaaaagaaca--tccttt 249  Q
    ||||||||||||  |  ||||||||||||||||||||||  | ||||| ||||||||  ||||||||||||| || | ||||||||| || |  ||||||    
T  20736866 agccgtaattgggtcactgttgacgttccttccgctactcatatgttcgaataatgtgtttgtttgttgctt-gcttcttttcaaaataataaatccttt 20736964  T
Q  250 cgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttat 348  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||| |||| |||||  ||| |||||||||||||||| ||| ||    
T  20736965 cgtcccgcccgagatgaaagtgaacttgtgtagggcttttcgctttaag-aattgtcatcgttaacaaaaaattcgttttgatcccgactttgttttcat 20737063  T
Q  349 tttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||| |||||| |||||||||| |||||||||    
T  20737064 tttgtgcttcttcttgaaaaatggtaaaacaaaaaac 20737100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 156 - 385
Target Start/End: Original strand, 20741735 - 20741969
Alignment:
Q  156 agccgtaattggaccgttgttgacgttccttccgctactttt-tgttcaaataatgt--ttgtttgttgctttgcgt-ttttcaaaagaaca--tccttt 249  Q
    ||||||||||||  |  ||||||||||||||||||||||  | ||||| ||||||||  ||||||||||||| || | ||||||||| || |  ||||||    
T  20741735 agccgtaattgggtcactgttgacgttccttccgctactcatatgttcgaataatgtgtttgtttgttgctt-gcttcttttcaaaataataaatccttt 20741833  T
Q  250 cgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttat 348  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||| |||| |||||  ||| |||||||||||||||| ||| ||    
T  20741834 cgtcccgcccgagatgaaagtgaacttgtgtagggcttttcgctttaag-aattgtcatcgttaacaaaaaattcgttttgatcccgactttgttttcat 20741932  T
Q  349 tttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||| |||||| |||||||||| |||||||||    
T  20741933 tttgtgcttcttcttgaaaaatggtaaaacaaaaaac 20741969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 156 - 385
Target Start/End: Original strand, 20745424 - 20745658
Alignment:
Q  156 agccgtaattggaccgttgttgacgttccttccgctactttt-tgttcaaataatgt--ttgtttgttgctttgcgt-ttttcaaaagaaca--tccttt 249  Q
    ||||||||||||  |  ||||||||||||||||||||||  | ||||| ||||||||  ||||||||||||| || | ||||||||| || |  ||||||    
T  20745424 agccgtaattgggtcactgttgacgttccttccgctactcatatgttcgaataatgtgtttgtttgttgctt-gcttcttttcaaaataataaatccttt 20745522  T
Q  250 cgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttat 348  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||| |||| |||||  ||| |||||||||||||||| ||| ||    
T  20745523 cgtcccgcccgagatgaaagtgaacttgtgtagggcttttcgctttaag-aattgtcatcgttaacaaaaaattcgttttgatcccgactttgttttcat 20745621  T
Q  349 tttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||| |||||| |||||||||| |||||||||    
T  20745622 tttgtgcttcttcttgaaaaatggtaaaacaaaaaac 20745658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 175 - 385
Target Start/End: Complemental strand, 22160448 - 22160234
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa----------catcctttcgtcccgcccgagat 264  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||| || ||||||||| ||          |||||||| ||||||||||||||    
T  22160448 ttgacgttccttccgctactttttgttcaattaatgtttgtttgatgcttttcgcttttcaaaaaaaaaaaaaaaaacatccttttgtcccgcccgagat 22160349  T
Q  265 gaaagtgaactggtgtagggct-ttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttct 362  Q
    |||||||||||||||||||||| |||||||||||| |||||||       | |||||||||| |||||||||||| || |||||||||| |||| |||      
T  22160348 gaaagtgaactggtgtagggcttttttgctttaag-aattgtc-------aaaaaaaggtcgttttgatcccgacctttcttttattttatgctcttttc 22160257  T
Q  363 tggaaaatggtaatacaaaaaac 385  Q
    || ||||||||||||||||||||    
T  22160256 tgaaaaatggtaatacaaaaaac 22160234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 243 - 383
Target Start/End: Complemental strand, 17679302 - 17679163
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    ||||||||||||| ||||||  || |||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||  ||||||||||| |||    
T  17679302 atcctttcgtcccacccgaggcgagagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgccttgatcccgaccttg 17679205  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaa 383  Q
     |||||||||||||||||||| | ||||||||||||||||||    
T  17679204 tttttattttgtgctttttctggaaaaatggtaatacaaaaa 17679163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 245 - 384
Target Start/End: Original strand, 6666793 - 6666935
Alignment:
Q  245 cctttcgtcccgcccgagatgaaagtgaactggtgtagggcttttt----gctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactt 339  Q
    ||||||||||| |||||| |||||||||| | || |||||||||||    |||||| | | || ||||||||||| ||| |||||| | |||||||||||    
T  6666793 cctttcgtcccacccgaggtgaaagtgaatttgtttagggctttttttttgctttatgtattt-tcatcattaatgaaa-ggtcgtctcgatcccgactt 6666890  T
Q  340 tgcttttattttgtgctttttcttggaaaatggtaatacaaaaaa 384  Q
    || |||||||||||||||||||| | |||||||||||||||||||    
T  6666891 tgtttttattttgtgctttttctggaaaaatggtaatacaaaaaa 6666935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 243 - 383
Target Start/End: Complemental strand, 39841953 - 39841814
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    ||||||||||||| ||||||  || |||||| | || ||||||||||||||||| | | || |||||||||||  || |||||  ||||||||||| |||    
T  39841953 atcctttcgtcccacccgaggcgagagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatggaa-ggtcgccttgatcccgaccttg 39841856  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaa 383  Q
     |||||||||||||||||||| | ||||||||||||||||||    
T  39841855 tttttattttgtgctttttctggaaaaatggtaatacaaaaa 39841814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 376
Target Start/End: Complemental strand, 24703137 - 24703006
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttg 341  Q
    |||||||||| || ||||||||||||||||||| || |||| |||||||||| | | | ||  |||||||||||||||  ||| ||||||| ||||||||    
T  24703137 atcctttcgttccacccgagatgaaagtgaacttgtttaggtctttttgcttcatgtattttccatcattaataaaaa-ttcgttttgatctcgactttg 24703039  T
Q  342 cttttattttgtgctttttcttggaaaatggtaat 376  Q
     |||||  ||||| ||||||| | |||||||||||    
T  24703038 ttttta--ttgtgttttttctagaaaaatggtaat 24703006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 385
Target Start/End: Complemental strand, 22092646 - 22092565
Alignment:
Q  306 catcattaataaaaaggtcgttt-gatcccgactttgctttt-attttgtgctttttcttggaaaatggt-aatacaaaaaac 385  Q
    |||||||||||||||| ||| || |||||||||||||||||| |||||||||| ||||| | |||||||| ||||||||||||    
T  22092646 catcattaataaaaag-tcgcttcgatcccgactttgctttttattttgtgctctttctagaaaaatggtaaatacaaaaaac 22092565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 74 - 383
Target Start/End: Original strand, 9082 - 9392
Alignment:
Q  74 gcttttcgaaggttgaattcagacacgcaagataatccactaacgggttatattccttggtattgcgacacatggggtggtcagccgtaattggaccgtt 173  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||| |||||||  ||||    
T  9082 gcttttcgaagattgaattcagacacgcaagataatccactaacgggttatattccctggtattgcgacacatggagtggttagccataattgggacgtt 9181  T
Q  174 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaa 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||    
T  9182 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgcttttagcttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaa 9281  T
Q  274 ctggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttgg-aaaatg 371  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||| ||| | ||||||||| ||||||| ||||||    
T  9282 ctggtgtagggctttttgctttatg-aattgtcatcattaataaaaaggtcgttttgatcccgactttgttttcactttgtgcttcttcttggaaaaatg 9380  T
Q  372 gtaatacaaaaa 383  Q
    |||||| |||||    
T  9381 gtaataaaaaaa 9392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 74 - 436
Target Start/End: Complemental strand, 14817260 - 14816905
Alignment:
Q  74 gcttttcgaaggttgaattcagacacgcaagataatccactaacgggttatattccttggtattgcgacacatggggtggtcagccgtaattggaccgtt 173  Q
    |||||||||||||||||||||||| |||||||||||||| |  ||||||||||||| |||||||||||||||| | ||||| ||||||||||||  ||||    
T  14817260 gcttttcgaaggttgaattcagacgcgcaagataatccattgccgggttatattccctggtattgcgacacatagagtggttagccgtaattgggtcgtt 14817161  T
Q  174 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaa 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||| ||||||||||||||||||||||||||||||||||    
T  14817160 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgcttgtcgcttttcaaaaaaacatcctttcgtcccgcccgagatgaaagtgaa 14817061  T
Q  274 ctggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttggaaaatgg 372  Q
    || |||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||| ||| |||||| |||||||||||||||||||    
T  14817060 cttgtgtagggttttttgctttaag-aattgtcatcattaataaaaaggtcgttttgatctcgactttgttttcattttgcgctttttcttggaaaatgg 14816962  T
Q  373 taatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataact 436  Q
    ||||||||||||   ||          |||||||||||||||||||||||||||||||||||||    
T  14816961 taatacaaaaaaaccaa-------aaaaataaaatcattctcaaatgtctgcataatcataact 14816905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 131 - 386
Target Start/End: Original strand, 1958581 - 1958837
Alignment:
Q  131 tggtattgcgacacatggggtggtcagccgtaattggaccgttgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtt 230  Q
    |||||||||||||||||| ||||| ||||||||||||  || |||||||||||||||| ||||||||||||||||||||||||||||||||||||  | |    
T  1958581 tggtattgcgacacatggagtggttagccgtaattgggtcgctgttgacgttccttccactactttttgttcaaataatgtttgtttgttgctttttgat 1958680  T
Q  231 tttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaa-ggtcg-ttt 328  Q
    |||||||| || |||||||||||||| ||||||||||||  |||| || |||||| |||||||| ||| | ||  |||||||||||||||  |||| |||    
T  1958681 tttcaaaa-aaaatcctttcgtcccgtccgagatgaaagcaaacttgtttagggcattttgcttcaagcattttccatcattaataaaaatagtcgtttt 1958779  T
Q  329 gatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaaca 386  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  1958780 gatcccgactttgttttcattttgtgctttttcttggaaaatggtaatacaaaaaaca 1958837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 235 - 383
Target Start/End: Complemental strand, 6201022 - 6200874
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcc 333  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  6201022 aaaaaaacatcctctcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag-aattgtcatcattaataaaaaggtcgctttgatcc 6200924  T
Q  334 cgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaa 383  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6200923 cgactttgcttttgttttgtgctttttcttggaaaatggtaatacaaaaa 6200874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 19372031 - 19372173
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttg 341  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||    
T  19372031 atcctttcgtcccgcccgagatgaaagtgaacttgtgtagggctttttgctttaag-aattgtcatcattaataaaaaggtcgttttgatccctactttg 19372129  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
     ||| ||||||||||| |||||||||||||||||||||||||||    
T  19372130 ttttcattttgtgcttcttcttggaaaatggtaatacaaaaaac 19372173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 175 - 385
Target Start/End: Original strand, 35072340 - 35072551
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaac 274  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||| |  ||||| |||||||||||||||||||||||| ||| ||||||||||    
T  35072340 ttgacgttccttccaccactttttgttcaaataatgtttgtttgttgcttttctcttttc-aaagaacatcctttcgtcccgcccaagacgaaagtgaac 35072438  T
Q  275 tggtgtagggctttttgctttaagaaattgtcatcattaataaaaag--gtcgt-ttgatcccgactttgcttttattttgtgctttttcttggaaaatg 371  Q
    |  ||||||||| ||||||| | | ||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||| |||| | |  || ||||||    
T  35072439 ttatgtagggctctttgcttcatg-aattgtcatcattaataaaaagaagtcgtcttgatcccgaccttgcttttattttatgctctcttctgaaaaatg 35072537  T
Q  372 gtaatacaaaaaac 385  Q
    ||||||||||||||    
T  35072538 gtaatacaaaaaac 35072551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 235 - 384
Target Start/End: Original strand, 22430720 - 22430869
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcc 333  Q
    |||| |||||||||||||| |||| || ||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  22430720 aaaaaaacatcctttcgtctcgcctgatatgaaagtgaactggtgtaggactttttgctttaag-aattgtcattattaataaaaaggtcgttttgatcc 22430818  T
Q  334 cgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaa 384  Q
    ||  |||| ||||||||||||||| ||||||||||||| ||||||||||||    
T  22430819 cgtttttgtttttattttgtgcttcttcttggaaaatgataatacaaaaaa 22430869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 13467493 - 13467667
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||||||| || ||||||||||||| ||||||  ||||||||| | || ||||||||||||||||| | | || |||    
T  13467493 atgtttgtttgttgctttatgtttttcaaaaaaa-atcctttcgtcccacccgaggcgaaagtgaatttgtttagggctttttgctttatgtattt-tca 13467590  T
Q  308 tcattaataaaaaggtcgt-ttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    |||||||| ||| |||||| ||||||||||| ||| |||||||||||||||||||| | ||||||||||||||||||||    
T  13467591 tcattaatgaaa-ggtcgtcttgatcccgaccttg-ttttattttgtgctttttctggaaaaatggtaatacaaaaaac 13467667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 13472487 - 13472661
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||||||| || ||||||||||||| ||||||  ||||||||| | || ||||||||||||||||| | | || |||    
T  13472487 atgtttgtttgttgctttatgtttttcaaaaaaa-atcctttcgtcccacccgaggcgaaagtgaatttgtttagggctttttgctttatgtattt-tca 13472584  T
Q  308 tcattaataaaaaggtcgt-ttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    |||||||| ||| |||||| ||||||||||| ||| |||||||||||||||||||| | ||||||||||||||||||||    
T  13472585 tcattaatgaaa-ggtcgtcttgatcccgaccttg-ttttattttgtgctttttctggaaaaatggtaatacaaaaaac 13472661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 230 - 385
Target Start/End: Complemental strand, 2339388 - 2339233
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaa--ggtcgt- 326  Q
    ||||||||||||  |||||||||||||||| ||| |||||||||||  ||||||||| ||||||| | ||| |||| ||||||||||||||  ||||||     
T  2339388 ttttcaaaagaa--tcctttcgtcccgcccaagacgaaagtgaacttatgtagggctctttgcttcatgaa-ttgttatcattaataaaaaaaggtcgtc 2339292  T
Q  327 ttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||||| ||||||||||||| |||| |||  || ||||||||||||||||||||    
T  2339291 ttgatcccgaccttgcttttattttatgctcttttctgaaaaatggtaatacaaaaaac 2339233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 35286119 - 35286055
Alignment:
Q  4 taagggtccctcaaatattaacagaaaatgaaggaccccccaggggagggtagcagaggcaacag 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35286119 taagggtccctcaaatattaacagaaaatgaaggaccccccaggggagggtagcagaggcaacag 35286055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 31555836 - 31556009
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||| ||| ||  |||||||||||| ||||||  || |||||| | || ||||| ||||||||||| | | || |||    
T  31555836 atgtttgtttgttgctttatgtttttccaaaaaa--tcctttcgtcccacccgaggcgagagtgaatttgtttagggatttttgctttatgtattt-tca 31555932  T
Q  308 tcattaataaaaaggtcgt-ttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    |||||| | ||| |||||| ||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||    
T  31555933 tcattagtgaaa-ggtcgtcttgatcccgactttg-ttttattttgtgctttttctggaaaaatggtaatacaaaaaac 31556009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 2388421 - 2388561
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgtttga-tcccgactttg 341  Q
    ||||||||||||| ||||||  || |||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||| | | ||||||| |||    
T  2388421 atcctttcgtcccacccgaggcgagagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtctcaatcccgaccttg 2388518  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
     |||||||||||||||||||| | ||||||||||||||||||||    
T  2388519 -ttttattttgtgctttttctggaaaaatggtaatacaaaaaac 2388561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 383
Target Start/End: Original strand, 31543769 - 31543908
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    |||||| |||||| ||||||   |||||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||| ||||||||||| |||    
T  31543769 atccttccgtcccacccgaggcaaaagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtcttgatcccgaccttg 31543866  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaa 383  Q
     ||||||||| ||||||||||   ||||||||||||||||||    
T  31543867 tttttattttttgctttttctgaaaaaatggtaatacaaaaa 31543908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 140 - 290
Target Start/End: Complemental strand, 1065335 - 1065182
Alignment:
Q  140 gacacatggggtggtcagccgtaattggaccgttgttgacgttccttccgctactt-tttgttcaaataatgt--ttgtttgttgctttgcgtttttcaa 236  Q
    ||||||||| |||||  |||  ||||||  || |||||| ||||||||| |||||  ||||||||||||||||  |||||||||| |||  |||||||      
T  1065335 gacacatggagtggtttgccacaattgggtcgctgttgatgttccttccactactcatttgttcaaataatgtgtttgtttgttgttttatgtttttctt 1065236  T
Q  237 aagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggcttttt 290  Q
    || || ||||||||||||||||||||| |||||| |||| ||||| || |||||    
T  1065235 aaaaatatcctttcgtcccgcccgagacgaaagtaaacttgtgtatggtttttt 1065182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 360
Target Start/End: Original strand, 9296432 - 9296466
Alignment:
Q  326 tttgatcccgactttgcttttattttgtgcttttt 360  Q
    |||||||||||||||| ||||||||||||||||||    
T  9296432 tttgatcccgactttgtttttattttgtgcttttt 9296466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 403 - 435
Target Start/End: Complemental strand, 6200865 - 6200833
Alignment:
Q  403 aaaatcattctcaaatgtctgcataatcataac 435  Q
    |||||||||||||||| ||||||||||||||||    
T  6200865 aaaatcattctcaaatatctgcataatcataac 6200833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 204; Significance: 1e-111; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 74 - 385
Target Start/End: Original strand, 99551 - 99864
Alignment:
Q  74 gcttttcgaaggttgaattcagacacgcaagataatccactaacgggttatattccttggtattgcgacacatggggtggtcagccgtaattggaccgtt 173  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||| ||||| ||||||||||||  ||||    
T  99551 gcttttcgaaggttgaattcagacaggcaagataatccactaacgggttatattccctggtattgcgacgcatggagtggttagccgtaattgggtcgtt 99650  T
Q  174 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaa 273  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |  ||||||||| ||||||||||||||||||||||| ||||||||||    
T  99651 gttgacgttccttccgctactttttgttcaaataatgtttgtctgttgctttacacttttcaaaaaaacatcctttcgtcccgcccgaggtgaaagtgaa 99750  T
Q  274 ctggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttgg--aaaat 370  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||| |||||||||| ||| |||||||||||||   |||  |||||    
T  99751 ctggtgtagggctttttgctttaag-aattgtcatcactaataaaaaggtcgttttgaacccgactttgttttcattttgtgcttttctctggaaaaaat 99849  T
Q  371 ggtaatacaaaaaac 385  Q
    |||| ||||||||||    
T  99850 ggtagtacaaaaaac 99864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 436
Target Start/End: Original strand, 99880 - 99912
Alignment:
Q  404 aaatcattctcaaatgtctgcataatcataact 436  Q
    ||||||||||||||| |||||||||||||||||    
T  99880 aaatcattctcaaatatctgcataatcataact 99912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 74 - 385
Target Start/End: Complemental strand, 24748 - 24437
Alignment:
Q  74 gcttttcgaaggttgaattcagacacgcaagataatccactaacgggttatattccttggtattgcgacacatggggtggtcagccgtaattggaccgtt 173  Q
    |||||||||||||| | ||||||| ||||||||||||||||   |||||||||||  | |||||||||||||||  ||||| ||||||||||||  ||||    
T  24748 gcttttcgaaggttaagttcagacgcgcaagataatccactgctgggttatattcgctagtattgcgacacatgaagtggttagccgtaattgggtcgtt 24649  T
Q  174 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaa 273  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||    
T  24648 gttgacgttcctcccgctactttttgttcaaaaaatgtttgtttgttgcttttcgcttttcaaaagaacattctttcgtcccgcccgagatgaaagtgaa 24549  T
Q  274 ctggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttggaaaatgg 372  Q
    ||  ||||| ||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||| | |||||||    
T  24548 cttttgtagagcttttttctttaag-aattgtcatcattaataaaaaggtcgttttgatcccgactttgttttcattttgtgctttttctggaaaaatgg 24450  T
Q  373 taatacaaaaaac 385  Q
    |||||||||||||    
T  24449 taatacaaaaaac 24437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 174; Significance: 2e-93; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 75 - 385
Target Start/End: Original strand, 9435 - 9750
Alignment:
Q  75 cttttcgaaggttgaattcagacacgcaagataatccactaacgggttatattccttggtatt-gcgacacatggggtggtcagccgtaattggaccgtt 173  Q
    ||||||||||||||||||||||||||||||||||||||||  || |||||||| | | || || | ||||||||| ||||| ||||||||||||  |  |    
T  9435 cttttcgaaggttgaattcagacacgcaagataatccactgccgagttatattacctagtgtttgtgacacatggagtggttagccgtaattgggtcact 9534  T
Q  174 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa--catcctttcgtcccgcccgagatgaaagtg 271  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||||||||| || |||| |||| ||  ||||||||||||||||||||||||||||||    
T  9535 gttgatgttcattccgctaccttttgttcaaataatgtttgtttgttgcttttcgcttttaaaaaaaaaacatcctttcgtcccgcccgagatgaaagtg 9634  T
Q  272 aactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg-cttttattttgtgctttttcttgg-aaa 368  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||| |||    
T  9635 aacttgtgtagggctttttgctttaag-aattgtcatcattaataaaaaggtcgtcttgatcccgactttgttttttattttgtgctttttcttggaaaa 9733  T
Q  369 atggtaatacaaaaaac 385  Q
    |||||||||||||||||    
T  9734 atggtaatacaaaaaac 9750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 168; Significance: 7e-90; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 74 - 385
Target Start/End: Original strand, 20557025 - 20557345
Alignment:
Q  74 gcttttcgaaggttgaattcagacacgcaagataatccactaacgggttatattccttggtattgcgacacatggggtggtcagccgtaattggaccgtt 173  Q
    |||||||||||||||||||||||| | |||||||||||| |  ||||||||||||| |||||||||||||||||| ||||| |||| || ||||  ||||    
T  20557025 gcttttcgaaggttgaattcagacgcacaagataatccattgccgggttatattccctggtattgcgacacatggagtggttagccatatttgggtcgtt 20557124  T
Q  174 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgttttt----caaaagaacatcctttcgtcccgcccgagatgaaag 269  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||| || ||||     |||| |||||| |||||||||||||||||||||||    
T  20557125 gttgacgtacattccgctactttttgttcaaataatgtttgtttgttgcttttcgcttttaaaaaaaaaaaacatcatttcgtcccgcccgagatgaaag 20557224  T
Q  270 tgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttgctttt---attttgtgctttttcttgg 365  Q
    ||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||| |||||| |||||||| ||||   | |||||||||||||||||    
T  20557225 tgaactgatgtagggctttttgctttaag-atttgtcatcattaataaaaaggtcgtcttgatctcgactttgtttttttaaatttgtgctttttcttgg 20557323  T
Q  366 --aaaatggtaatacaaaaaac 385  Q
      ||||||||||||||||||||    
T  20557324 aaaaaatggtaatacaaaaaac 20557345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 175 - 385
Target Start/End: Complemental strand, 3385856 - 3385640
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaaca-----tcctttcgtcccgcccgagatgaaag 269  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||| || |||| |||| || |     ||||||||||||||||||||||||||    
T  3385856 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgattttcgcttttaaaaaaaaaaaaaaatcctttcgtcccgcccgagatgaaag 3385757  T
Q  270 tgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttt-tcttggaa 367  Q
    ||| || |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||| ||| | ||    
T  3385756 tgatcttgtgtagggctttttgctttaag-aattgtcatcattaataaaaaggtcgttttgatcccgactttgttttcattttgtgcttttctctggaaa 3385658  T
Q  368 aatggtaatacaaaaaac 385  Q
    ||||||||||||||||||    
T  3385657 aatggtaatacaaaaaac 3385640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 230 - 385
Target Start/End: Original strand, 22708162 - 22708317
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaat-aaaaaggtcg-tt 327  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| ||    
T  22708162 ttttcaaaa-aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag-aattgtcatcatttataaaaaaggtcgttt 22708259  T
Q  328 tgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22708260 tgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 22708317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 240 - 385
Target Start/End: Original strand, 16364999 - 16365145
Alignment:
Q  240 aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaat-aaaaaggtcg-tttgatcccgac 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| ||||||||||||    
T  16364999 aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag-aattgtcatcatttataaaaaaggtcgttttgatcccgac 16365097  T
Q  338 tttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16365098 tttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 16365145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 175 - 384
Target Start/End: Original strand, 9187604 - 9187821
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaac---------atcctttcgtcccgcccgagatg 265  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||| ||          |||||||||||||||||||||||    
T  9187604 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgcttttcgcttttcaaaaaaaataaaaataaatcctttcgtcccgcccgagatg 9187703  T
Q  266 aaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttg 364  Q
    ||||| | || |||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||  |    
T  9187704 aaagttatcttgtgtagggttttttgctttaag-aattgtcatcattaataaaaaggtcgttttgatcccgactttg-ttttattttgtgctttttccgg 9187801  T
Q  365 gaaaatggtaatacaaaaaa 384  Q
     |||||||||||||||||||    
T  9187802 aaaaatggtaatacaaaaaa 9187821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 243 - 436
Target Start/End: Complemental strand, 16724094 - 16723904
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttg 341  Q
    ||||||||||||||||  |||||||||||||||  |||||||||||||||||| || | |||||||| |||||||||||||||||| |||||||||||||    
T  16724094 atcctttcgtcccgcca-agatgaaagtgaacttatgtagggctttttgctttgagca-ttgtcatctttaataaaaaggtcgttttgatcccgactttg 16723997  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaaacagaagnnnnnnnntaataaaatcattctcaaatgtctgcataatcataact 436  Q
     ||| |||||||||||||||||||||||||||||||||||||||  ||          || ||||||||||||||||||||||||||||||||||    
T  16723996 ttttcattttgtgctttttcttggaaaatggtaatacaaaaaaccaaa--aaaaaaagaaaaaaatcattctcaaatgtctgcataatcataact 16723904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 14874148 - 14874289
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttg 341  Q
    ||||||||||||||||||||| |||||||||||  ||||||| |||||||||||||  || |||||||||||||||||||||| |||||||||||||||     
T  14874148 atcctttcgtcccgcccgagacgaaagtgaacttatgtagggatttttgctttaag-tatagtcatcattaataaaaaggtcgttttgatcccgacttt- 14874245  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
     |||||||||||||||||||| | ||||||||||||||||||||    
T  14874246 attttattttgtgctttttctggaaaaatggtaatacaaaaaac 14874289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 196 - 385
Target Start/End: Original strand, 12512228 - 12512418
Alignment:
Q  196 tttgttcaaataatgt-ttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctt 294  Q
    ||||||||| |||| | ||||||||||||||  ||||| ||||| || ||||||||||||| ||||||| ||||||||||| || ||||||||||| |||    
T  12512228 tttgttcaattaatatgttgtttgttgctttatgttttacaaaaaaaaatcctttcgtcccacccgagacgaaagtgaacttgtttagggctttttcctt 12512327  T
Q  295 taagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    || |  ||| |||||||||||||||   ||| |||||||||||||||| |||||  |||||||| ||||||||||||||||||||| |||||    
T  12512328 tacg-tattttcatcattaataaaataatcgctttgatcccgactttgtttttaccttgtgcttgttcttggaaaatggtaatacataaaac 12512418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 14921598 - 14921742
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttg 341  Q
    ||||||||||||||||| ||| |||||||||||  |||||||||||||||||||||  ||||||||| |||||||| |||||| ||||||||||||||||    
T  14921598 atcctttcgtcccgcccaagacgaaagtgaacttatgtagggctttttgctttaag-cattgtcatcgttaataaagaggtcgctttgatcccgactttg 14921696  T
Q  342 cttttattttgtgc-tttttcttgg-aaaatggtaatacaaaaaac 385  Q
     ||| ||||||||| |||||||||| |||||||||| |||||||||    
T  14921697 ttttcattttgtgcttttttcttggaaaaatggtaacacaaaaaac 14921742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 243 - 385
Target Start/End: Complemental strand, 15571023 - 15570879
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttg 341  Q
    ||||||| ||||||||| |||  ||||||||||  |||||||||||||||||||||  ||||||||| |||||||| |||||| ||||||||||||||||    
T  15571023 atccttttgtcccgcccaagacaaaagtgaacttatgtagggctttttgctttaag-cattgtcatcgttaataaagaggtcgttttgatcccgactttg 15570925  T
Q  342 cttttattttgtgc-tttttcttgg-aaaatggtaatacaaaaaac 385  Q
     ||| ||||||||| |||||||||| ||||||||||||||||||||    
T  15570924 ttttcattttgtgcttttttcttggaaaaatggtaatacaaaaaac 15570879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 243 - 385
Target Start/End: Complemental strand, 15575151 - 15575007
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttg 341  Q
    ||||||| ||||||||| |||  ||||||||||  |||||||||||||||||||||  ||||||||| |||||||| |||||| ||||||||||||||||    
T  15575151 atccttttgtcccgcccaagacaaaagtgaacttatgtagggctttttgctttaag-cattgtcatcgttaataaagaggtcgttttgatcccgactttg 15575053  T
Q  342 cttttattttgtgc-tttttcttgg-aaaatggtaatacaaaaaac 385  Q
     ||| ||||||||| |||||||||| ||||||||||||||||||||    
T  15575052 ttttcattttgtgcttttttcttggaaaaatggtaatacaaaaaac 15575007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 326 - 385
Target Start/End: Complemental strand, 3832042 - 3831983
Alignment:
Q  326 tttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3832042 tttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 3831983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 243 - 386
Target Start/End: Complemental strand, 26216963 - 26216823
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgtttgatcccgactttgc 342  Q
    ||||||||||||| ||||||| | ||||||||| || ||||||| ||||||||  |  ||| ||||||||||   |||||||| |||||||||||||||     
T  26216963 atcctttcgtcccacccgagacggaagtgaacttgtttagggctctttgcttttcg-tattttcatcattaa-ggaaaggtcgcttgatcccgactttg- 26216867  T
Q  343 ttttattttgtgctttttcttggaaaatggtaatacaaaaaaca 386  Q
    |||||||||||||||||||| | |||||||||||||||||||||    
T  26216866 ttttattttgtgctttttctggaaaaatggtaatacaaaaaaca 26216823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 74 - 213
Target Start/End: Original strand, 8660590 - 8660717
Alignment:
Q  74 gcttttcgaaggttgaattcagacacgcaagataatccactaacgggttatattccttggtattgcgacacatggggtggtcagccgtaattggaccgtt 173  Q
    |||||||||||||||||||||||| ||||||||||||||||            ||| |||||||||||||||||| ||||| | ||||||||||  ||||    
T  8660590 gcttttcgaaggttgaattcagacgcgcaagataatccact------------tccctggtattgcgacacatggagtggttaaccgtaattgggtcgtt 8660677  T
Q  174 gttgacgttccttccgctactttttgttcaaataatgttt 213  Q
    ||| | || |||||||||||||||||||||||||||||||    
T  8660678 gtttatgtcccttccgctactttttgttcaaataatgttt 8660717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 243 - 328
Target Start/End: Complemental strand, 15898801 - 15898717
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt 328  Q
    ||||||||||||||||| ||| |||||||||||  |||||||||||||||||||||  ||||||||| ||||||||||||||||||    
T  15898801 atcctttcgtcccgcccaagacgaaagtgaacttatgtagggctttttgctttaag-cattgtcatcgttaataaaaaggtcgttt 15898717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 384
Target Start/End: Original strand, 3360520 - 3360662
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttg 341  Q
    ||||||| ||||||||||||| |||||||||||  | ||||| | ||||||| | | | ||  ||||||||||||||| |||| || |||||||||||||    
T  3360520 atccttttgtcccgcccgagacgaaagtgaactaatttagggttgtttgcttcaggcatttcccatcattaataaaaaagtcgcttcgatcccgactttg 3360619  T
Q  342 cttttattttgtgctttttcttgg-aaaatggtaatacaaaaaa 384  Q
     ||| |||| |||||||||||||| |||||||||||||||||||    
T  3360620 -tttcatttcgtgctttttcttggaaaaatggtaatacaaaaaa 3360662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 385
Target Start/End: Complemental strand, 8099468 - 8099327
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    |||||| |||||| ||||||  || |||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||| ||||||||||| | |    
T  8099468 atccttccgtcccacccgaggcgagagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtcttgatcccgacctcg 8099371  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
     |||||||||||||||||||| | ||||||||||||||||||||    
T  8099370 tttttattttgtgctttttctggaaaaatggtaatacaaaaaac 8099327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 212 - 320
Target Start/End: Complemental strand, 12509415 - 12509308
Alignment:
Q  212 ttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcat 311  Q
    ||||||||||||||  ||||||||||| || || |||||||||| |||| || |||||||||||  | ||||| ||||||||||| |  ||| |||||||    
T  12509415 ttgtttgttgctttatgtttttcaaaaaaaaattctttcgtcccacccgtgacgaaagtgaacttatttaggggtttttgctttacg-tattttcatcat 12509317  T
Q  312 taataaaaa 320  Q
    |||||||||    
T  12509316 taataaaaa 12509308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 33182693 - 33182748
Alignment:
Q  329 gatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||| ||| |||||||||||||||||| | | ||||||||||||||||||||    
T  33182693 gatcccgaccttg-ttttattttgtgctttttttggaaaaatggtaatacaaaaaac 33182748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 162; Significance: 3e-86; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 156 - 383
Target Start/End: Complemental strand, 15770279 - 15770051
Alignment:
Q  156 agccgtaattggaccgttgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttc-aaaagaacatcctttcgtcc 254  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||| |||||||||||||||    
T  15770279 agccgtaattgggtcgttgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgcttttcgcttttcaaaaaaaacatcctttcgtcc 15770180  T
Q  255 cgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgt 353  Q
    |||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||  |||||||||||    
T  15770179 cgcccgagataaaagtgaactggggtagggctttttgctttaag-aattgtcatcattaataaaaaggtcgttttgatcccaactttatttttattttgt 15770081  T
Q  354 gctttttcttggaaaatggtaatacaaaaa 383  Q
    |||| |||||||||||||||||||||||||    
T  15770080 gcttcttcttggaaaatggtaatacaaaaa 15770051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 230 - 385
Target Start/End: Complemental strand, 42634530 - 42634374
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg--tt 327  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||    
T  42634530 ttttcaaaa-aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttactttaagaaattgtcatcattaataaaaaggtcgtttt 42634432  T
Q  328 tgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42634431 tgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 42634374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 230 - 385
Target Start/End: Original strand, 8814449 - 8814605
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg--tt 327  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||  ||    
T  8814449 ttttcaaaa-aacatcgtttcgtcccgcccgagatgaaagtgaactggtgtagggctttttactttaagaaattgtcatcattaataaaaatgtcgtttt 8814547  T
Q  328 tgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8814548 tgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 8814605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 230 - 385
Target Start/End: Complemental strand, 23882852 - 23882696
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaat-aaaaaggtcg-tt 327  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| ||    
T  23882852 ttttcaaaaaaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag-aattgtcatcatttataaaaaaggtcgttt 23882754  T
Q  328 tgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23882753 tgatcccgactttgcttttattttgtgctttttcttggaaaatggtaacacaaaaaac 23882696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 175 - 385
Target Start/End: Complemental strand, 34136424 - 34136211
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa----catcctttcgtcccgcccgagatgaaagt 270  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||| ||    |||||||||||||||||||||||||||||    
T  34136424 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgcttttcgcttttcaaaaaaaaaaacatcctttcgtcccgcccgagatgaaagt 34136325  T
Q  271 gaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttggaaaa 369  Q
    || ||  ||||||||||||||||||||| | | || ||||||||||||||||||| |||||||||||||||  ||||||||||||||||||  || ||||    
T  34136324 gatcttatgtagggctttttgctttaagtattggttatcattaataaaaaggtcgttttgatcccgacttt-attttattttgtgcttttt-atgaaaaa 34136227  T
Q  370 tggtaatacaaaaaac 385  Q
    ||||||||||||||||    
T  34136226 tggtaatacaaaaaac 34136211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 175 - 385
Target Start/End: Complemental strand, 13268065 - 13267854
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa--catcctttcgtcccgcccgagatgaaagtga 272  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||| ||| || |||| |||| ||  ||||||||||||||||||||||||||| |||    
T  13268065 ttgacgttccttccgctactttttgttcaattaatatttgtttgttgattttcgcttttaaaaaaaaaacatcctttcgtcccgcccgagatgaaattga 13267966  T
Q  273 actggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttggaaaatg 371  Q
     || |||||||||||||||||||||| | | |||||| ||||||||||||||| ||| |||||||||||  ||||||||||||||||||| || ||||||    
T  13267965 tcttgtgtagggctttttgctttaagtattggtcatctttaataaaaaggtcgtttttatcccgacttt-attttattttgtgctttttc-tgaaaaatg 13267868  T
Q  372 gtaatacaaaaaac 385  Q
    ||||||||||||||    
T  13267867 gtaatacaaaaaac 13267854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 235 - 385
Target Start/End: Complemental strand, 3427946 - 3427795
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcc 333  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| || |||||    
T  3427946 aaaaaaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag-aattgtcatcattaataaaaaagtcgcttcgatcc 3427848  T
Q  334 cgactttgc-ttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||| ||||||||| |||||||||| | ||||||||||||||||||||    
T  3427847 cgactttgctttttattttttgctttttctggaaaaatggtaatacaaaaaac 3427795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 243 - 386
Target Start/End: Complemental strand, 27973054 - 27972912
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgtttgatcccgactttgc 342  Q
    ||||||||||||| ||||||| | ||||||||| || ||||||||||||||||  | | || ||||||||||| ||||||||| |||||||||||||||     
T  27973054 atcctttcgtcccacccgagacggaagtgaacttgtttagggctttttgcttttcgtattt-tcatcattaatgaaaaggtcgcttgatcccgactttgt 27972956  T
Q  343 ttttattttgtgctttttcttggaaaatggtaatacaaaaaaca 386  Q
    |||  ||||||||||||||| | |||||||||||||||||||||    
T  27972955 tttatttttgtgctttttctggaaaaatggtaatacaaaaaaca 27972912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 196 - 384
Target Start/End: Complemental strand, 16269605 - 16269414
Alignment:
Q  196 tttgttcaaataatgt-ttgtttgttgctttgcgtttttcaaaagaaca-tcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgct 293  Q
    |||||||||||||||| |||||||||| ||| | |||||||||| || | |||| |||| | |||| | | ||||||||||| |||||||||| ||||||    
T  16269605 tttgttcaaataatgtgttgtttgttgattttcatttttcaaaaaaaaaatcctctcgttctgcccaaaacgaaagtgaacttgtgtagggctctttgct 16269506  T
Q  294 ttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttgg-aaaatggtaatacaaaaaa 384  Q
    ||||| |  |  ||||||||||||||| |||| |||||||||||||||| ||| |||| |||||||||||||| |||||||||||||||||||    
T  16269505 ttaagtatcttccatcattaataaaaaagtcgctttgatcccgactttg-tttcatttcgtgctttttcttggaaaaatggtaatacaaaaaa 16269414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 195 - 385
Target Start/End: Complemental strand, 565989 - 565801
Alignment:
Q  195 ttttgttcaaataat--gtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgc 292  Q
    |||||||||||||||  ||||||||||||||||  ||||||| ||| || ||||||||||||| ||||||  || |||||| | || ||||| |||||||    
T  565989 ttttgttcaaataatatgtttgtttgttgctttatgtttttccaaaaaa-atcctttcgtcccacccgaggcgagagtgaatttgtttagggatttttgc 565891  T
Q  293 tttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||  |   ||| ||||||||| | ||| |||||| ||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||    
T  565890 tt--atgtattttcatcattagtgaaa-ggtcgtcttgatcccgactttg-ttttattttgtgctttttctggaaaaatggtaatacaaaaaac 565801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 230 - 385
Target Start/End: Original strand, 842570 - 842725
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaat-aaaaaggtcgt-t 327  Q
    ||||||||||||  |||||||||||||||| ||| |||||||||||  ||||||||| ||||||| | | |||||||||||||||| ||||| ||||| |    
T  842570 ttttcaaaagaa--tcctttcgtcccgcccaagacgaaagtgaacttatgtagggctctttgcttcatg-aattgtcatcattaataaaaaaagtcgtct 842666  T
Q  328 tgatcccgactttgcttttattttgtgct-ttttcttggaaaatggtaatacaaaaaac 385  Q
    |||||||||| ||||||||||||| |||| ||||||   |||||||| |||||||||||    
T  842667 tgatcccgaccttgcttttattttatgctcttttctgaaaaaatggtgatacaaaaaac 842725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 230 - 385
Target Start/End: Original strand, 849746 - 849901
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaat-aaaaaggtcgt-t 327  Q
    ||||||||||||  |||||||||||||||| ||| |||||||||||  ||||||||| ||||||| | | |||||||||||||||| ||||| ||||| |    
T  849746 ttttcaaaagaa--tcctttcgtcccgcccaagacgaaagtgaacttatgtagggctctttgcttcatg-aattgtcatcattaataaaaaaagtcgtct 849842  T
Q  328 tgatcccgactttgcttttattttgtgct-ttttcttggaaaatggtaatacaaaaaac 385  Q
    |||||||||| ||||||||||||| |||| ||||||   |||||||| |||||||||||    
T  849843 tgatcccgaccttgcttttattttatgctcttttctgaaaaaatggtgatacaaaaaac 849901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 230 - 385
Target Start/End: Original strand, 1207750 - 1207905
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaat-aaaaaggtcgt-t 327  Q
    ||||||||||||  |||||||||||||||| ||| |||||||||||  ||||||||| ||||||| | | |||||||||||||||| ||||| ||||| |    
T  1207750 ttttcaaaagaa--tcctttcgtcccgcccaagacgaaagtgaacttatgtagggctctttgcttcatg-aattgtcatcattaataaaaaaagtcgtct 1207846  T
Q  328 tgatcccgactttgcttttattttgtgct-ttttcttggaaaatggtaatacaaaaaac 385  Q
    |||||||||| ||||||||||||| |||| ||||||   |||||||| |||||||||||    
T  1207847 tgatcccgaccttgcttttattttatgctcttttctgaaaaaatggtgatacaaaaaac 1207905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 243 - 384
Target Start/End: Complemental strand, 5205919 - 5205779
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    ||||||||||||| ||||||| | ||||||||| || |||||||||||||| ||   | || ||||||||||| |||||||||| ||| ||||||| ||     
T  5205919 atcctttcgtcccacccgagacggaagtgaacttgtttagggctttttgctgtatctattt-tcatcattaatgaaaaggtcgtcttggtcccgacctt- 5205822  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaaa 384  Q
    ||||||||||||||||||||| | |||||||||||||||||||    
T  5205821 cttttattttgtgctttttctggaaaaatggtaatacaaaaaa 5205779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 38413397 - 38413573
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||||||| || ||||||||||||| ||||||  ||||||||| | || ||||||||||||||| | |  ||| |||    
T  38413397 atgtttgtttgttgctttatgtttttcaaaaaaaaatcctttcgtcccacccgaggcgaaagtgaatttgtttagggctttttgcttcatg-tattttca 38413495  T
Q  308 tcattaataaaaaggtcgt-ttgatcccgactttgcttttattttgtgctttttcttg-gaaaatggtaatacaaaaaac 385  Q
    ||||||||  ||||||||| | ||||||||| | | |||||||||||||||| ||| |  ||||||||||||||||||||    
T  38413496 tcattaat-gaaaggtcgtctcgatcccgacctag-ttttattttgtgctttgtctggaaaaaatggtaatacaaaaaac 38413573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 243 - 384
Target Start/End: Original strand, 27437794 - 27437934
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    ||||||||||||| ||||||| | ||||||||| || |||||||||||||| ||   | || ||||||||||| |||||| ||| ||| ||||||| ||     
T  27437794 atcctttcgtcccacccgagacggaagtgaacttgtttagggctttttgctgtatctattt-tcatcattaatgaaaaggccgtcttggtcccgacctt- 27437891  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaaa 384  Q
    ||||||||||||||||||||| | |||||||||||||||||||    
T  27437892 cttttattttgtgctttttctggaaaaatggtaatacaaaaaa 27437934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 243 - 384
Target Start/End: Complemental strand, 4944659 - 4944519
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttg 341  Q
    ||||||||||||| ||||||  || |||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||| | |||||||||||||    
T  4944659 atcctttcgtcccacccgaggcgagagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtctcgatcccgactttg 4944562  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaaa 384  Q
     || |||||||| |||||||| | |||||||||||||||||||    
T  4944561 tttctattttgtactttttctggaaaaatggtaatacaaaaaa 4944519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 243 - 383
Target Start/End: Original strand, 13835228 - 13835367
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttg 341  Q
    |||||| |||||| ||||||  || |||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||| | ||||||||| |||    
T  13835228 atccttccgtcccacccgaggcgagagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtctcgatcccgaccttg 13835325  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaa 383  Q
     |||||||||||||||||||| | ||||||||||||||||||    
T  13835326 tttttattttgtgctttttctggaaaaatggtaatacaaaaa 13835367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 385
Target Start/End: Complemental strand, 16486273 - 16486170
Alignment:
Q  282 gggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttgcttttattttgtgctttttcttgg-aaaatggtaataca 379  Q
    ||||||||||||||| ||| || |||||||||||||| ||||||||| ||||||||||| | |||||||||||||||||| |||| ||||| ||||||||    
T  16486273 gggctttttgctttatgaattt-tcatcattaataaagaggtcgttttgatcccgacttcg-ttttattttgtgcttttttttggaaaaatcgtaataca 16486176  T
Q  380 aaaaac 385  Q
    ||||||    
T  16486175 aaaaac 16486170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 384
Target Start/End: Original strand, 29025984 - 29026123
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttg 341  Q
    ||||||||||||| ||||||| | |||||| || || ||||||||||||||||| | | || ||||||||||| ||| || | | | ||||||||| ||     
T  29025984 atcctttcgtcccacccgagacggaagtgagcttgtttagggctttttgctttacgtattt-tcatcattaatgaaa-ggccatctcgatcccgacctt- 29026080  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaaa 384  Q
    ||||||||||||||||||||| | |||||||||||||||||||    
T  29026081 cttttattttgtgctttttctggaaaaatggtaatacaaaaaa 29026123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 1958037 - 1958126
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag 298  Q
    |||||||||||||| |||  | |||| |||| || ||| ||||||||| ||||||||||||||||||| || ||| |||||||||||||||    
T  1958037 atgtttgtttgttgttttatgcttttaaaaaaaa-atcatttcgtcccacccgagatgaaagtgaacttgtttagtgctttttgctttaag 1958126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 12587673 - 12587818
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttg 341  Q
    ||||||||||||||||| ||  |||||| ||||  | ||||||||||||||| | | | |   |||||||||||||| ||||| || |||||||||||||    
T  12587673 atcctttcgtcccgcccaaggcgaaagttaactaatttagggctttttgcttcaggcattctccatcattaataaaa-ggtcgcttcgatcccgactttg 12587771  T
Q  342 ct-tttattttgtgctttttcttg-gaaaatggt-aatacaaaaaac 385  Q
    || ||||||||||||||||||| |  |||||||| ||||||||||||    
T  12587772 ctctttattttgtgctttttctagaaaaaatggtaaatacaaaaaac 12587818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 162; Significance: 3e-86; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 156 - 383
Target Start/End: Original strand, 1546012 - 1546240
Alignment:
Q  156 agccgtaattggaccgttgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttc-aaaagaacatcctttcgtcc 254  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||| |||||||||||||||    
T  1546012 agccgtaattgggtcgttgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgcttttcgcttttcaaaaaaaacatcctttcgtcc 1546111  T
Q  255 cgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgt 353  Q
    |||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||  |||||||||||    
T  1546112 cgcccgagataaaagtgaactggggtagggctttttgctttaag-aattgtcatcattaataaaaaggtcgttttgatcccaactttatttttattttgt 1546210  T
Q  354 gctttttcttggaaaatggtaatacaaaaa 383  Q
    |||| |||||||||||||||||||||||||    
T  1546211 gcttcttcttggaaaatggtaatacaaaaa 1546240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 131 - 386
Target Start/End: Original strand, 22326640 - 22326895
Alignment:
Q  131 tggtattgcgacacatggggtggtcagccgtaattggaccgttgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtt 230  Q
    |||||||||||||||||| ||||| ||||||||||||  || |||||||||||||||| ||||||||||||||||||||||||||||||||||||  | |    
T  22326640 tggtattgcgacacatggagtggttagccgtaattgggtcgctgttgacgttccttccactactttttgttcaaataatgtttgtttgttgctttttgct 22326739  T
Q  231 tttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttg 329  Q
    |||||||| || || ||||||| ||| ||||||||||||  |||| || |||||| |||||||| ||| | ||  ||||||||||||||| |||| ||||    
T  22326740 tttcaaaa-aaaattctttcgttccgtccgagatgaaagcaaacttgtttagggcattttgcttcaagcattttccatcattaataaaaaagtcgttttg 22326838  T
Q  330 atcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaaca 386  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  22326839 atcccgactttgttttcattttgtgctttttcttggaaaatggtaatacaaaaaaca 22326895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 230 - 385
Target Start/End: Complemental strand, 619415 - 619259
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg--tt 327  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||    
T  619415 ttttcaaaa-aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttactttaagaaattgtcatcattaataaaaaggtcgtttt 619317  T
Q  328 tgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  619316 tgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 619259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 175 - 385
Target Start/End: Original strand, 19716417 - 19716627
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaac 274  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||| |  |||||||| |||||||||||||||||||| ||| |||||||||||    
T  19716417 ttgacgttccttccaccactttttgttcaaataatgtttgtttgttgcttttctcttttcaaa-gaacatcctttcgtcccgcctgaggtgaaagtgaac 19716515  T
Q  275 tggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttt-tcttggaaaatgg 372  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| | ||| ||||||||||||| ||| | |||||||    
T  19716516 tggtgtagggctttttgctttaag-aattgtcatcattaataaaaaggtcgttttgatcccgacttggttttcattttgtgcttttctctggaaaaatgg 19716614  T
Q  373 taatacaaaaaac 385  Q
    |||||||||||||    
T  19716615 taatacaaaaaac 19716627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 173 - 383
Target Start/End: Complemental strand, 27071579 - 27071368
Alignment:
Q  173 tgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa-catcctttcgtcccgcccgagatgaaagtg 271  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||| || |||| |||| || ||||||||||| |||||||||| |||||||    
T  27071579 tgttgacgttccttccgctactttttgttcaattaatgtttgtttgttacttttcgcttttaaaaaaaaacatcctttcgttccgcccgagacgaaagtg 27071480  T
Q  272 aactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttggaaaat 370  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| ||| | ||||||||| ||||||||||||    
T  27071479 aacttgtgtagggctttttgctttaag-aattgtcatcattaataaaaaagtcgttttgatcccgactttgttttcactttgtgcttcttcttggaaaat 27071381  T
Q  371 ggtaatacaaaaa 383  Q
    |||||||||||||    
T  27071380 ggtaatacaaaaa 27071368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 235 - 385
Target Start/End: Original strand, 27514175 - 27514326
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcc 333  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  27514175 aaaaaaacatcccttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcctcattaataaaaaggtcgttttgatcc 27514274  T
Q  334 cgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27514275 cgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 27514326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 230 - 385
Target Start/End: Complemental strand, 16821066 - 16820911
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaat-aaaaaggtcg-tt 327  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| ||    
T  16821066 ttttcaaaa-aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag-aattgtcatcatttataaaaaaggtcgttt 16820969  T
Q  328 tgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16820968 tgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 16820911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 175 - 385
Target Start/End: Complemental strand, 18946744 - 18946527
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa--------catcctttcgtcccgcccgagatga 266  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||| || ||||||||| ||        ||| |||||||||||||||||||||    
T  18946744 ttgacgttccttccgctactttttgttcaattaaggtttgtttgttgcttttcgcttttcaaaaaaaaaaaaaaacattctttcgtcccgcccgagatga 18946645  T
Q  267 aagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttgg 365  Q
    |||||| || |||||||||||||||||||||| | | |||||||||||||||||||||| ||||| |||||||||  ||||||||||||||||||| ||     
T  18946644 aagtgatcttgtgtagggctttttgctttaagtattggtcatcattaataaaaaggtcgttttgagcccgacttt-attttattttgtgctttttc-tga 18946547  T
Q  366 aaaatggtaatacaaaaaac 385  Q
    ||||||||||||||||||||    
T  18946546 aaaatggtaatacaaaaaac 18946527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 243 - 385
Target Start/End: Complemental strand, 20456279 - 20456137
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtc-gtttgatcccgactttg 341  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||  ||||||||||||||||    
T  20456279 atcctttcgtcccgcccgagatgaaagtgaacttgtgtagggctttttgctttaag-aattatcatcattaataaaaaggtcattttgatcccgactttg 20456181  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
     ||| ||||||||||| ||||||||||||||||||| |||||||    
T  20456180 ttttcattttgtgcttcttcttggaaaatggtaatataaaaaac 20456137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 230 - 385
Target Start/End: Complemental strand, 24146962 - 24146806
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-ttt 328  Q
    ||||||||| ||||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||| |||    
T  24146962 ttttcaaaaaaacatcctttcatcccgcccaggatgaaagtgaactagtgtagggctttttgctttaag-atttgtcatcattaataaaaaggtcgtttt 24146864  T
Q  329 gatcccgactttgcttttattttgtgctttttcttgg-aaaatggtaatacaaaaaac 385  Q
    ||||||||||||  ||| ||||||||||||||||||| ||||||||||||||||||||    
T  24146863 gatcccgactttattttcattttgtgctttttcttggaaaaatggtaatacaaaaaac 24146806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 175 - 340
Target Start/End: Complemental strand, 22776513 - 22776345
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttc---aaaagaacatcctttcgtcccgcccgagatgaaagtg 271  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||| || |||||   |||| ||||||||||| ||||||||||||||||||||    
T  22776513 ttgacattccttccgctactttttgttcaattaatgtttgtttgttgcttttcgcttttcaaaaaaaaaacatcctttcatcccgcccgagatgaaagtg 22776414  T
Q  272 aactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgacttt 340  Q
    | || |||||||| ||||||||||||| | ||||||||||||||||||||||||| |||||| |||||||    
T  22776413 atcttgtgtagggttttttgctttaag-atttgtcatcattaataaaaaggtcgtcttgatctcgacttt 22776345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 240 - 381
Target Start/End: Complemental strand, 20054071 - 20053931
Alignment:
Q  240 aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgact 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||| |||| ||||||||| |||    
T  20054071 aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggcttttttctttcag-aattgtcatcattaataaaaatgtcgttttgatcccaact 20053973  T
Q  339 ttgcttttattttgtgctttttcttggaaaatggtaatacaaa 381  Q
    ||| |||||||||||||||||||| | ||||||||||||||||    
T  20053972 ttg-ttttattttgtgctttttctggaaaaatggtaatacaaa 20053931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 247 - 384
Target Start/End: Original strand, 18437692 - 18437828
Alignment:
Q  247 tttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttgcttt 345  Q
    ||||||||||||  ||| |||||||||||  ||||||||||||||||||||| | |||| |||||||||||||||||||||| ||||||||||||| |||    
T  18437692 tttcgtcccgcca-agacgaaagtgaacttatgtagggctttttgctttaagca-ttgttatcattaataaaaaggtcgttttgatcccgactttgtttt 18437789  T
Q  346 tattttgtgctttttcttggaaaatggtaatacaaaaaa 384  Q
     ||||||||||| ||||||||||||||||||||||||||    
T  18437790 cattttgtgcttcttcttggaaaatggtaatacaaaaaa 18437828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 230 - 381
Target Start/End: Original strand, 18912381 - 18912531
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt- 328  Q
    ||||||||||||  |||||||||||||||| |||  ||||||||||  ||||||||| ||||||| | ||| ||||||||||||||||| |  ||||||     
T  18912381 ttttcaaaagaa--tcctttcgtcccgcccaagacaaaagtgaacttatgtagggctctttgcttcatgaa-ttgtcatcattaataaatatatcgtttt 18912477  T
Q  329 gatcccgactttgcttttattttgtgctttttct-tggaaaatggtaatacaaa 381  Q
    ||||||||||||| ||||||||| |||||||||| || ||||||||||||||||    
T  18912478 gatcccgactttgattttattttatgctttttctctgaaaaatggtaatacaaa 18912531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 235 - 340
Target Start/End: Complemental strand, 20044142 - 20044037
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcc 333  Q
    |||| ||||||||||| |||| |||  |||||||||||||| ||||||||||||||| |||||| | |||||||||||||||||||||||| ||||||||    
T  20044142 aaaaaaacatcctttcatcccacccaggatgaaagtgaactagtgtagggctttttgttttaag-atttgtcatcattaataaaaaggtcgttttgatcc 20044044  T
Q  334 cgacttt 340  Q
    |||||||    
T  20044043 cgacttt 20044037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 208 - 383
Target Start/End: Original strand, 5990187 - 5990363
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaaca--tcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgt 305  Q
    ||||||||||||||||||  ||||| ||||| || |  |||||||||||| ||||||  || |||||| | || ||||||||||||||||| | | || |    
T  5990187 atgtttgtttgttgctttatgttttccaaaaaaaaaaatcctttcgtcccacccgaggcgagagtgaatttgtttagggctttttgctttatgtattt-t 5990285  T
Q  306 catcattaataaaaaggtcgt-ttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaa 383  Q
    |||||||||| ||| |||||  |||||| |||| ||| |||||||||||||||||||| | ||||||||||||||||||    
T  5990286 catcattaatgaaa-ggtcgccttgatctcgaccttgtttttattttgtgctttttctggaaaaatggtaatacaaaaa 5990363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 190 - 385
Target Start/End: Original strand, 28355893 - 28356094
Alignment:
Q  190 ctactttttgttcaaataat--gtttgtttgttgctttgcgtttttcaaaag-------aacatcctttcgtcccgcccgagatgaaagtgaactggtgt 280  Q
    ||||||||||||||| ||||  ||||||||||||||||  |||||||||||        || | |||||| |||| || |||  ||||||||| | || |    
T  28355893 ctactttttgttcaattaatatgtttgtttgttgctttatgtttttcaaaaacaaaaaaaaaaacctttcctcccacctgaggcgaaagtgaatttgttt 28355992  T
Q  281 agggctttttgctttaagaaattgtcatcattaataaaaaggtcgtttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaa 380  Q
    |||||||||||||||| | | || ||||||||| | ||| ||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||||||    
T  28355993 agggctttttgctttatgtattt-tcatcattagtgaaa-ggtcgcttgatcccgactttg-ttttattttgtgctttttctggaaaaatggtaatacaa 28356089  T
Q  381 aaaac 385  Q
    |||||    
T  28356090 aaaac 28356094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 190 - 385
Target Start/End: Original strand, 28307087 - 28307289
Alignment:
Q  190 ctactttttgttcaaataat--gtttgtttgttgctttgcgtttttcaaaag--------aacatcctttcgtcccgcccgagatgaaagtgaactggtg 279  Q
    ||||||||||||||| ||||  ||||||||||||||||  |||||||||||         || | |||||| |||| || |||  ||||||||| | ||     
T  28307087 ctactttttgttcaattaatatgtttgtttgttgctttatgtttttcaaaaacaaaaaaaaaaaacctttcctcccacctgaggcgaaagtgaatttgtt 28307186  T
Q  280 tagggctttttgctttaagaaattgtcatcattaataaaaaggtcgtttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaataca 379  Q
    ||||||||||||||||| | | || ||||||||| | ||| ||||| ||||||||||||||| |||||||||||||||||||| | ||||||||||||||    
T  28307187 tagggctttttgctttatgtattt-tcatcattagtgaaa-ggtcgcttgatcccgactttg-ttttattttgtgctttttctggaaaaatggtaataca 28307283  T
Q  380 aaaaac 385  Q
    ||||||    
T  28307284 aaaaac 28307289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 243 - 385
Target Start/End: Complemental strand, 27055108 - 27054966
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    ||||||||||||| ||||||| | ||||||||| || |||||||||||||| ||   | || ||||||||||| |||||||||| ||| ||||||| ||     
T  27055108 atcctttcgtcccacccgagacggaagtgaacttgtttagggctttttgctgtatctattt-tcatcattaatgaaaaggtcgtcttggtcccgacctt- 27055011  T
Q  342 cttttattttgtgctttttcttg-gaaaatggtaatacaaaaaac 385  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||    
T  27055010 cttttattttgtgctttttctggaaaaaatggtaatacaaaaaac 27054966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 243 - 386
Target Start/End: Original strand, 16638001 - 16638143
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    |||||| |||||| ||||||  || |||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||| ||||||||||| ||     
T  16638001 atccttccgtcccacccgaggcgagagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtcttgatcccgacctta 16638098  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaaaca 386  Q
     ||||||||||||||| |||| | |||||||||||||||||||||    
T  16638099 tttttattttgtgcttattctggaaaaatggtaatacaaaaaaca 16638143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 208 - 385
Target Start/End: Complemental strand, 15649883 - 15649708
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    |||||||||||||| |||  ||||||||||| | |||   |||||||| | ||||| ||||||||||| || |||| |||||||||||| |  |||  ||    
T  15649883 atgtttgtttgttgttttatgtttttcaaaaaatcat---ttcgtcccacgcgagacgaaagtgaacttgtttaggactttttgctttatg-catttcca 15649788  T
Q  308 tcattaat--aaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||  ||||| |||| |||||||||||||||| ||||| ||||| |||||||| | |||| |||||||| ||||||    
T  15649787 tcattaataaaaaaaagtcgttttgatcccgactttg-ttttactttgtactttttctggaaaaacggtaatacgaaaaac 15649708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 384
Target Start/End: Original strand, 16582927 - 16583101
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||||||  || |||||||| |||| | ||||  || | |||| | || ||| ||||||||||||| |  ||| |||    
T  16582927 atgtttgtttgttgctttatgtttttcaaa--aaaatcctttcatcccactcgaggcgagattgaatttgtttagagctttttgctttatg-tattttca 16583023  T
Q  308 tcattaataaaaaggtcgt-ttgatcccgactttgcttttattttgtgctttttcttg-gaaaatggtaatacaaaaaa 384  Q
    |||||||| ||| |||||| | | ||||||| ||| |||||||||||||||||||| |  |||||||||||||||||||    
T  16583024 tcattaatgaaatggtcgtctcggtcccgaccttg-ttttattttgtgctttttctggaaaaaatggtaatacaaaaaa 16583101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 384
Target Start/End: Complemental strand, 16612453 - 16612279
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||||||  || |||||||| |||| | ||||  || | |||| | || ||| ||||||||||||| |  ||| |||    
T  16612453 atgtttgtttgttgctttatgtttttcaaa--aaaatcctttcatcccactcgaggcgagattgaatttgtttagagctttttgctttatg-tattttca 16612357  T
Q  308 tcattaataaaaaggtcgt-ttgatcccgactttgcttttattttgtgctttttcttg-gaaaatggtaatacaaaaaa 384  Q
    |||||||| ||| |||||| | | ||||||| ||| |||||||||||||||||||| |  |||||||||||||||||||    
T  16612356 tcattaatgaaatggtcgtctcggtcccgaccttg-ttttattttgtgctttttctggaaaaaatggtaatacaaaaaa 16612279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 384
Target Start/End: Complemental strand, 25502801 - 25502723
Alignment:
Q  305 tcatcattaataaaaaggtcgt-ttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaa 384  Q
    ||||||||||| ||| |||||| ||||||||||| ||| ||| |||||||||||||| | | |||||||||||||||||||    
T  25502801 tcatcattaatgaaa-ggtcgtcttgatcccgaccttg-tttaattttgtgctttttttggaaaaatggtaatacaaaaaa 25502723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 143; Significance: 6e-75; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 156 - 385
Target Start/End: Original strand, 11315 - 11543
Alignment:
Q  156 agccgtaattggaccgttgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtccc 255  Q
    ||||||||||||  || ||||| |||| ||||||||||||||||||||||||||||||||||||| |||| || ||||||||| ||| || |||| ||||    
T  11315 agccgtaattgggtcgctgttg-cgtttcttccgctactttttgttcaaataatgtttgtttgtttcttttcgcttttcaaaaaaacgtcatttcatccc 11413  T
Q  256 gcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtg 354  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||| |||||||||||     
T  11414 gcccgagatgaaagtgaactggtgtagggctttttgctttaag-atttgtcatcattaataaaaaggtcgttttgatcccgactttgtttttattttgtt 11512  T
Q  355 ctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||| ||||||||||||||| |||||||||||    
T  11513 cttcttcttggaaaatggtgatacaaaaaac 11543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 143; Significance: 6e-75; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 107 - 384
Target Start/End: Original strand, 24693119 - 24693390
Alignment:
Q  107 aatccactaacgggttatattccttggtattgcgacacatggggtggtcagccgtaattggaccgttgttgacgttccttccgctactttttgttcaaat 206  Q
    ||||||||  ||||||||||| | |||||||||||||||||| |||||     ||||||||  ||||||||||||||||||| |||||||||||||||||    
T  24693119 aatccactgtcgggttatattacctggtattgcgacacatggagtggtt----gtaattgggtcgttgttgacgttccttccactactttttgttcaaat 24693214  T
Q  207 aatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtc 306  Q
    ||||||||||||||||||| || ||||||||  || ||| ||||||||||||||||| ||||||| |||  |||||||||| ||||||||||  || |||    
T  24693215 aatgtttgtttgttgcttttcgcttttcaaa--aaaatcatttcgtcccgcccgagacgaaagtggacttatgtagggcttcttgctttaag-tatggtc 24693311  T
Q  307 atcattaataaaaaggtcgttt-gatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaa 384  Q
    |||||||||||||||||||||| ||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  24693312 atcattaataaaaaggtcgtttcgatcccgactttgttttcattttgtgcttcttcttggaaaatggtaatacaaaaaa 24693390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 74 - 384
Target Start/End: Original strand, 24702070 - 24702374
Alignment:
Q  74 gcttttcgaaggttgaattcagacacgcaagataatccactaacgggttatattccttggtattgcgacacatggggtggtcagccgtaattggaccgtt 173  Q
    ||||||||||| |||||||||||  ||||| |||||||| |  |||||||||||   |||||||||||||||||| |||||     |||||| |  ||||    
T  24702070 gcttttcgaagattgaattcagatgcgcaatataatccattgtcgggttatattatctggtattgcgacacatggagtggtt----gtaatttggtcgtt 24702165  T
Q  174 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaa 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||  || ||||||| |||  ||| |||| |||| ||||    
T  24702166 gttgacgttccttccgctactttttgttcaaataatgtttgtttgttgcttttcgcttttcaaa--aaaatccttttgtcgtgcctgagacgaaattgaa 24702263  T
Q  274 ctggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttgcttttattttgtgctttttcttggaaaatgg 372  Q
    ||  |||||||||||| ||||||||  || ||||||||||||||||||||||||| ||| || |||||| ||| ||||||||||| ||||||||||||||    
T  24702264 cttatgtagggcttttcgctttaag-tatggtcatcattaataaaaaggtcgtttcgattccaactttgttttcattttgtgcttcttcttggaaaatgg 24702362  T
Q  373 taatacaaaaaa 384  Q
    ||||||||||||    
T  24702363 taatacaaaaaa 24702374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 175 - 385
Target Start/End: Complemental strand, 20278399 - 20278185
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa-----catcctttcgtcccgcccgagatgaaag 269  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||  | ||||||||| ||     ||||||||||| ||||||||||||||||    
T  20278399 ttgacggtccttccgctactttttgttcaattaatgtttgtttgttgcttttagcttttcaaaaaaaaaaaacatcctttcgttccgcccgagatgaaag 20278300  T
Q  270 tgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttggaaa 368  Q
    ||| || |||||||||||||||||||||| | | | |||||||||||||||||||| |||||||||||||||  ||||||||||||||||||| || |||    
T  20278299 tgatcttgtgtagggctttttgctttaagtattggccatcattaataaaaaggtcgttttgatcccgacttt-attttattttgtgctttttc-tgaaaa 20278202  T
Q  369 atggtaatacaaaaaac 385  Q
    |||||||||||||||||    
T  20278201 atggtaatacaaaaaac 20278185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 208 - 385
Target Start/End: Complemental strand, 30689714 - 30689540
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||  ||| || ||||||| ||||| ||||||||||||||||| |  | ||||||||||||||||| |  ||| |||    
T  30689714 atgtttgtttgttgctttatgttttttcaaaaaaaatccttttgtcccacccgagatgaaagtgaattcatctagggctttttgctttatg-tattttca 30689616  T
Q  308 tcattaataaaaaggtcgtttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    |||||| |  |||||||| ||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||    
T  30689615 tcattagt-gaaaggtcgcttgatcccgactttg-ttttattttgtgctttttctggaaaaatggtaatacaaaaaac 30689540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 243 - 384
Target Start/End: Complemental strand, 3762805 - 3762666
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgtttgatcccgactttgc 342  Q
    ||||||||||||| ||||||| | |||||| || || ||||||||||||||||  | | || ||||||||||| ||||||||| |||||||||||||||     
T  3762805 atcctttcgtcccacccgagacggaagtgagcttgtttagggctttttgcttttcgtattt-tcatcattaatgaaaaggtcgcttgatcccgactttg- 3762708  T
Q  343 ttttattttgtgctttttcttggaaaatggtaatacaaaaaa 384  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  3762707 ttttattttgtgctttttctggaaaaatggtaatacaaaaaa 3762666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 243 - 384
Target Start/End: Original strand, 16277292 - 16277432
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    ||||||||||||| ||||||| | ||||||||| || |||||||||||||| ||   | || ||||||||||| |||||||||| ||| ||||||| ||     
T  16277292 atcctttcgtcccacccgagacggaagtgaacttgtttagggctttttgctgtatctattt-tcatcattaatgaaaaggtcgtcttggtcccgacctt- 16277389  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaaa 384  Q
    ||||||||||||||||||||| | |||||||||||||||||||    
T  16277390 cttttattttgtgctttttctggaaaaatggtaatacaaaaaa 16277432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 24288938 - 24289082
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggcttttt---gctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgact 338  Q
    ||||||||||||| |||||| |||||||||||| || ||| |||||||   |||||| | | || ||||||||||| ||| |||||| | ||||||||||    
T  24288938 atcctttcgtcccacccgaggtgaaagtgaacttgtttagtgcttttttttgctttatgtattt-tcatcattaatgaaa-ggtcgtctcgatcccgact 24289035  T
Q  339 ttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||| |||||||||||||||||||| | ||||||||||||||||||||    
T  24289036 ttgtttttattttgtgctttttctggaaaaatggtaatacaaaaaac 24289082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 243 - 383
Target Start/End: Original strand, 35142431 - 35142570
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    |||||| |||||| ||||||  ||||||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||| ||||||||||| |||    
T  35142431 atccttccgtcccacccgaggcgaaagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtcttgatcccgaccttg 35142528  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaa 383  Q
     ||||||||| |||||||||| | ||||||||||||||||||    
T  35142529 tttttattttttgctttttctggaaaaatggtaatacaaaaa 35142570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 385
Target Start/End: Complemental strand, 42570886 - 42570745
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    |||||| |||||| ||||||  || |||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||| ||||||||||| | |    
T  42570886 atccttccgtcccacccgaggcgagagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtcttgatcccgacctcg 42570789  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
     |||||||||||||||||||| | ||||||||||||||||||||    
T  42570788 tttttattttgtgctttttctggaaaaatggtaatacaaaaaac 42570745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 383
Target Start/End: Complemental strand, 15949448 - 15949270
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaaca---tcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattg 304  Q
    ||||||||||||||||||  ||||| ||||| || |   ||||||||||||  |||||  || |||||| | || ||||||||||||||||| | | ||     
T  15949448 atgtttgtttgttgctttatgttttccaaaaaaaaaaaatcctttcgtcccatccgaggcgagagtgaatttgtttagggctttttgctttatgtattt- 15949350  T
Q  305 tcatcattaataaaaaggtcgt-ttgatcccgactttgcttttattttgtgct-ttttcttggaaaatggtaatacaaaaa 383  Q
    ||||||||||| ||| |||||| ||||||||||| ||| |||||||||||||| |||||| | ||||||||||||||||||    
T  15949349 tcatcattaatgaaa-ggtcgtcttgatcccgaccttgtttttattttgtgcttttttctggaaaaatggtaatacaaaaa 15949270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 243 - 383
Target Start/End: Original strand, 20614548 - 20614687
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    |||||| |||||| | ||||  || |||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||| ||||||||||| |||    
T  20614548 atccttccgtcccactcgaggcgagagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtcttgatcccgaccttg 20614645  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaa 383  Q
     |||||||||||||||||||| | ||||||||||||||||||    
T  20614646 tttttattttgtgctttttctggaaaaatggtaatacaaaaa 20614687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 243 - 385
Target Start/End: Complemental strand, 21856342 - 21856201
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    ||||||||||||| |||  || | ||||||||| || ||||||||| |||| ||   | || ||||||||||| |||||||||| ||| ||||||| ||     
T  21856342 atcctttcgtcccacccatgacggaagtgaacttgtttagggctttatgctgtatctattt-tcatcattaatgaaaaggtcgtcttggtcccgacctt- 21856245  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||||||||||||||| | ||||||||||||||||||||    
T  21856244 cttttattttgtgctttttctggaaaaatggtaatacaaaaaac 21856201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 385
Target Start/End: Original strand, 25498514 - 25498583
Alignment:
Q  318 aaaggtcgttt-gatcccgactttgcttttattttgtgctttttcttg-gaaaatggtaatacaaaaaac 385  Q
    ||||||||||| ||||||||| ||| |||||||||||||||||||| |  ||||||||||||||||||||    
T  25498514 aaaggtcgttttgatcccgaccttgtttttattttgtgctttttctggaaaaaatggtaatacaaaaaac 25498583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 384
Target Start/End: Original strand, 21116838 - 21116978
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttg 341  Q
    ||||||| ||||  ||||||| | ||||||| | ||  |||||||||||||||| | | || ||||||||||| ||| |||||| | ||||||||| |||    
T  21116838 atcctttagtcctacccgagacggaagtgaatttgttcagggctttttgctttatgta-ttctcatcattaatgaaa-ggtcgtctcgatcccgaccttg 21116935  T
Q  342 cttttattttgtgctttttcttgg-aaaatggtaatacaaaaaa 384  Q
     ||||||||||||||||||  ||| |||||||||||||||||||    
T  21116936 -ttttattttgtgcttttttgtggaaaaatggtaatacaaaaaa 21116978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 5e-72; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 173 - 384
Target Start/End: Original strand, 15623621 - 15623833
Alignment:
Q  173 tgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttc-aaaagaacatcctttcgtcccgcccgagatgaaagtg 271  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| || ||||| |||| ||||||||||||||| |||| |||||||||||    
T  15623621 tgttgacgttccttctgctactttttgttcaaataatgtttgtctgttgcttttcgcttttcaaaaaaaacatcctttcgtcctgccctagatgaaagtg 15623720  T
Q  272 aactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttggaaaat 370  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| ||| | ||||||||| ||||||||||||    
T  15623721 aactggtgtagggctttttgcttaaag-aattgtcatcattaataaaaaggtcgttttgatcccgcctttgttttcactttgtgcttcttcttggaaaat 15623819  T
Q  371 ggtaatacaaaaaa 384  Q
    ||||||||||||||    
T  15623820 ggtaatacaaaaaa 15623833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 175 - 385
Target Start/End: Complemental strand, 30093170 - 30092960
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa--catcctttcgtcccgcccgagatgaaagtga 272  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| || |||| |||| ||  |||||||||||||||||||||||||||||||    
T  30093170 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgcttttcgcttttaaaaaaaaaacatcctttcgtcccgcccgagatgaaagtga 30093071  T
Q  273 actggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttggaaaatg 371  Q
     || |||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||| || ||||||    
T  30093070 tcttgtgtagggttttttgctttaag-aattgtcatcattaataaaaaggtcgttttgatcccgacttt-attttattttgtgctttttc-tgaaaaatg 30092974  T
Q  372 gtaatacaaaaaac 385  Q
    ||||||||||||||    
T  30092973 gtaatacaaaaaac 30092960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 175 - 385
Target Start/End: Original strand, 70903 - 71111
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaac 274  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||| ||  ||||||||||||||||||||||||||||| |    
T  70903 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgcttttcgcttttcaaaaaaa--tcctttcgtcccgcccgagatgaaagtgatc 71000  T
Q  275 tggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttggaaaatggt 373  Q
    | |||||||||||||||||||||| | | |||||||||||||||||||||| |||||||||||||||  ||||||||| |||| |||  || ||||||||    
T  71001 ttgtgtagggctttttgctttaagtattggtcatcattaataaaaaggtcgttttgatcccgacttt-attttattttatgctcttttctgaaaaatggt 71099  T
Q  374 aatacaaaaaac 385  Q
    ||||||||||||    
T  71100 aatacaaaaaac 71111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 175 - 384
Target Start/End: Original strand, 8608944 - 8609163
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa--------catcctttcgtcccgcccgagatga 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||| ||        |||||| |||||||||| |||||||    
T  8608944 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgcttttcgcttttcaaaaaaaaaaaaaaacatcctatcgtcccgcctgagatga 8609043  T
Q  267 aagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgc-ttttattttgtgctttttcttg 364  Q
    |||||| || |||||||||||||||||||||| | | |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |    
T  8609044 aagtgatcttgtgtagggctttttgctttaagtattggtcatcattaataaaaaggtcgttttgatcccgactttgctttttattttgtgctttttctgg 8609143  T
Q  365 gaaaatggtaatacaaaaaa 384  Q
     |||||||||||||||||||    
T  8609144 aaaaatggtaatacaaaaaa 8609163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 230 - 385
Target Start/End: Original strand, 8808534 - 8808690
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaat-aaaaaggtcg-tt 327  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| ||    
T  8808534 ttttcaaaaaaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag-aattgtcatcatttataaaaaaggtcgttt 8808632  T
Q  328 tgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8808633 tgatcccgactttgcttttattttgtgctttttcttggaaaatggtaacacaaaaaac 8808690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 230 - 385
Target Start/End: Original strand, 21611964 - 21612119
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaat-aaaaaggtcg-tt 327  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| ||    
T  21611964 ttttcaaaa-aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag-aattgtcatcatttataaaaaaggtcgttt 21612061  T
Q  328 tgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21612062 tgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 21612119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 230 - 385
Target Start/End: Original strand, 6198412 - 6198568
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-ttt 328  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  6198412 ttttcaaaa-aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttactttaagaaattgtcatcattaataaaaaggtcgtttt 6198510  T
Q  329 gatcccgactttgcttttattttgtgctttttcttgg-aaaatggtaatacaaaaaac 385  Q
    ||||||| |||| |||| ||||||||||||||||||| ||||||||||||||||||||    
T  6198511 gatcccgcctttactttcattttgtgctttttcttggaaaaatggtaatacaaaaaac 6198568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 186 - 385
Target Start/End: Original strand, 11184135 - 11184339
Alignment:
Q  186 tccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaaca----tcctttcgtcccgcccgagatgaaagtgaactggtgta 281  Q
    ||||||||||||||||||| |||||||||||||||||||| || |||  |||| || |    |||||||||||||||||||| |||||||| || |||||    
T  11184135 tccgctactttttgttcaattaatgtttgtttgttgcttttcgctttaaaaaaaaaaaaaaatcctttcgtcccgcccgagaggaaagtgatcttgtgta 11184234  T
Q  282 gggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaa 380  Q
     |||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||| |||||||||||||||    
T  11184235 tggctttttgctttaagtatttgtcatcattaataaaaaggtcgttttgatcccgactttgtttttagtttgtgctttttcttgaaaaatggtaatacaa 11184334  T
Q  381 aaaac 385  Q
    |||||    
T  11184335 aaaac 11184339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 175 - 385
Target Start/End: Complemental strand, 23285452 - 23285235
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaag--------aacatcctttcgtcccgcccgagatga 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||         || ||||||||||||||||||||||||    
T  23285452 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgcttttcgcttttcaaaaagaaattaaaaaatcctttcgtcccgcccgagatga 23285353  T
Q  267 aagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttgg 365  Q
    |||||| || |||||||||||||||||||||| | | |||||||||||||||||||| | |||||||||||||||  ||||||||||||||||||| ||     
T  23285352 aagtgatcttgtgtagggctttttgctttaagtattggtcatcattaataaaaaggttgttttgatcccgacttt-attttattttgtgctttttc-tga 23285255  T
Q  366 aaaatggtaatacaaaaaac 385  Q
    ||||||||||||||||||||    
T  23285254 aaaatggtaatacaaaaaac 23285235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 175 - 385
Target Start/End: Original strand, 33568619 - 33568832
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa---catcctttcgtcccgcccgagatgaaagtg 271  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||| || |||| |||| ||   ||||||||||||||||||||||||||||||    
T  33568619 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgattttcgcttttaaaaaaaaaaacatcctttcgtcccgcccgagatgaaagtg 33568718  T
Q  272 aactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttgcttttattttgtgctttttcttggaaaat 370  Q
    | || |||||||||||||||||| | | ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| |||| |||  || |||||    
T  33568719 atcttgtgtagggctttttgcttcatg-aattgtcatcattaataaaaaagtcgtcttgatcccgaccttgcttttattttatgctcttttctgaaaaat 33568817  T
Q  371 ggtaatacaaaaaac 385  Q
    ||||||| |||||||    
T  33568818 ggtaatataaaaaac 33568832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 140 - 384
Target Start/End: Complemental strand, 12476450 - 12476201
Alignment:
Q  140 gacacatggggtggtcagccgtaattggaccgttgttgacgttccttccgctactttt-tgttcaaataatgt--ttgtttgttgctttgcgtttttcaa 236  Q
    ||||||||| ||||  ||||||||||||  ||||||||| |||||||||||||||  | ||||||||||||||  |||||||||||||   | |||||||    
T  12476450 gacacatggagtggatagccgtaattgggtcgttgttgatgttccttccgctactcatctgttcaaataatgtgtttgtttgttgcttgctgcttttcaa 12476351  T
Q  237 aagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccg 335  Q
    ||  | || | ||||||| |||||| | ||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||    
T  12476350 aaataaatacattcgtcctgcccgatacgaaagtgaacttgtgtagggctttttgctttaag-aattgtaatcattaataaaaaggtcgttttgatcccg 12476252  T
Q  336 actttgcttttattttgtgctttttcttgg--aaaatggtaatacaaaaaa 384  Q
    |||||| ||||||| |||||||||||||||  |||||||||||||||||||    
T  12476251 actttgtttttattctgtgctttttcttgggaaaaatggtaatacaaaaaa 12476201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 175 - 385
Target Start/End: Complemental strand, 13109110 - 13108899
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgttttt--caaaagaacatcctttcgtcccgcccgagatgaaagtga 272  Q
    |||||||||||||||||||||||||||||| |||| |||| |||||| ||| |  ||||   |||| ||||||||||||||||||||||||||||| |||    
T  13109110 ttgacgttccttccgctactttttgttcaattaatttttgcttgttgattttcacttttaagaaaaaaacatcctttcgtcccgcccgagatgaaattga 13109011  T
Q  273 actggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttggaaaatg 371  Q
     || |||||||||||||||||||||| | | |||||| ||||||||||||||| |||||||||||||||  ||||||||||||||||||| || ||||||    
T  13109010 tcttgtgtagggctttttgctttaagtattggtcatctttaataaaaaggtcgttttgatcccgacttt-attttattttgtgctttttc-tgaaaaatg 13108913  T
Q  372 gtaatacaaaaaac 385  Q
    ||||||||||||||    
T  13108912 gtaatacaaaaaac 13108899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 235 - 385
Target Start/End: Original strand, 14421576 - 14421728
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggc-tttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatc 332  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||| |||||||||||||||| |||||||    
T  14421576 aaaaaaacatcctttcgtcccgcccgagatgaaagtgaactggtgaagggcttttttgctttaag-aattgtcattattaataaaaaggtcgttttgatc 14421674  T
Q  333 ccgactttgcttttattttgtgctttttcttgg-aaaatggtaatacaaaaaac 385  Q
    ||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||    
T  14421675 ccgactttgttttcattttgtgctttttcttggaaaaatggtaatacaaaaaac 14421728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 140 - 353
Target Start/End: Complemental strand, 14884723 - 14884501
Alignment:
Q  140 gacacatggggtggtcagccgtaattggaccgttgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaag 239  Q
    ||||||||| ||| | ||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| || |||| ||||     
T  14884723 gacacatggagtgtttagccgtaattggatcgttgttgacgttccttccactaccttttgttcaaataatgtttgtttgttgcttttcgcttttaaaaaa 14884624  T
Q  240 aa----------catcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-ttt 328  Q
    ||          |||||||||  || ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||| |||    
T  14884623 aaaaaaaaaaaacatcctttcagcctgcccgagatgaaagtgaacaggtgtagggctttttgctttaag-aattgtcatcattaataaaaaagtcgtttt 14884525  T
Q  329 gatcccgactttgcttttattttgt 353  Q
    ||||||||||||  |||||||||||    
T  14884524 gatcccgacttt-attttattttgt 14884501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 235 - 385
Target Start/End: Original strand, 30017083 - 30017234
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcc 333  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| || |||||    
T  30017083 aaaaaaacatcctttcgtcccgcccgagatgaaagtgaactggcgtagggctttttgctttaag-aattgtcatcattaataaaaaagtcgcttcgatcc 30017181  T
Q  334 cgactttgc-ttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||| ||||||||| |||||||||| | ||||||||||||||||||||    
T  30017182 cgactttgctttttattttttgctttttctggaaaaatggtaatacaaaaaac 30017234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 235 - 384
Target Start/End: Original strand, 3680514 - 3680664
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcc 333  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| || |||||    
T  3680514 aaaaaaacatcctttcgtcccgcccgagatgaaagtgaactggcgtagggctttttgctttaag-aattgtcatcattaataaaaaagtcgcttcgatcc 3680612  T
Q  334 cgactttgc-ttttattttgtgctttttcttggaaaatggtaatacaaaaaa 384  Q
    ||||||||| ||||||||| |||||||||| | |||||||||||||||||||    
T  3680613 cgactttgctttttattttttgctttttctggaaaaatggtaatacaaaaaa 3680664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 235 - 385
Target Start/End: Complemental strand, 15533382 - 15533231
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcc 333  Q
    |||| ||||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||    
T  15533382 aaaaaaacatcctttcatcccgcccaggatgaaagtgaactagtgtagggctttttgctttaag-atttgtcatcattaataaaaaggtcgttttgatcc 15533284  T
Q  334 cgactttgcttttattttgtgctttttcttgg-aaaatggtaatacaaaaaac 385  Q
    ||||||| |||| ||||||||||||||||||| ||||||||||||||||||||    
T  15533283 cgactttactttcattttgtgctttttcttggaaaaatggtaatacaaaaaac 15533231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 8620449 - 8620606
Alignment:
Q  229 tttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tt 327  Q
    ||||| |||| ||||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||| ||    
T  8620449 tttttaaaaaaaacatcctttcatcccgcccaggatgaaagtgaactagtgtagggctttttgctttaag-atttgtcatcattaataaaaaggtcgttt 8620547  T
Q  328 tgatcccgactttgcttttattttgtgctttttctt-ggaaaatggtaatacaaaaaac 385  Q
    | ||||||||||| |||| ||||||||||||||||| | |||||||||||| |||||||    
T  8620548 taatcccgactttactttcattttgtgctttttcttagaaaaatggtaatataaaaaac 8620606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 235 - 385
Target Start/End: Complemental strand, 46396754 - 46396602
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcc 333  Q
    |||| ||||||||||| |||||||   || ||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||    
T  46396754 aaaaaaacatcctttcatcccgcctaggacgaaagtgaactagtgtagggctttttgctttaag-atttgtcatcattaataaaaaggtcgttttgatcc 46396656  T
Q  334 cgactttgcttttattttgtgctttttcttgg--aaaatggtaatacaaaaaac 385  Q
    |||||||  ||| |||||||||||||||||||  ||||||||||||||||||||    
T  46396655 cgactttattttcattttgtgctttttcttggaaaaaatggtaatacaaaaaac 46396602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 175 - 385
Target Start/End: Original strand, 12557791 - 12558009
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa--------catcctttcgtcccgcccgagatga 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |  ||||||||| ||        || ||||| ||||||||||||||||    
T  12557791 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgcttttcacttttcaaaaaaaaaaaaaaacacccttttgtcccgcccgagatga 12557890  T
Q  267 aagtgaactggtgtagggctttttgctttaagaaattgtcatcattaat-aaaaaggtcgt-ttgatcccgactttgcttttattttgtgctttttcttg 364  Q
    |||||||||  ||||||||| ||||||| | | |||||| ||||||||| ||||| ||||| ||||||| ||| |||||||| |||| |||| |||  ||    
T  12557891 aagtgaacttatgtagggctctttgcttcatg-aattgttatcattaataaaaaaagtcgtcttgatccggaccttgctttt-ttttatgctcttttctg 12557988  T
Q  365 gaaaatggtaatacaaaaaac 385  Q
     ||||||||||||||||||||    
T  12557989 aaaaatggtaatacaaaaaac 12558009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 243 - 386
Target Start/End: Complemental strand, 15681422 - 15681281
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgtttgatcccgactttgc 342  Q
    ||||||||||||| ||||||| | ||||||||| || ||||||| | ||||||  | | || ||||||||||| ||||||||| |||||||||||||||     
T  15681422 atcctttcgtcccacccgagacggaagtgaacttgtttagggctctatgcttttcgtattt-tcatcattaatgaaaaggtcgcttgatcccgactttg- 15681325  T
Q  343 ttttattttgtgctttttcttggaaaatggtaatacaaaaaaca 386  Q
    |||||||||||||||||||| | |||||||||||||||||||||    
T  15681324 ttttattttgtgctttttctggaaaaatggtaatacaaaaaaca 15681281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 208 - 384
Target Start/End: Original strand, 25267263 - 25267437
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||| ||| || ||||||||||||| ||||||  || |||||| | || ||||| ||||||||||| |  ||| |||    
T  25267263 atgtttgtttgttgctttatgtttttccaaaaaaaatcctttcgtcccacccgaggcgagagtgaatttgtttagggatttttgctttatg-tattttca 25267361  T
Q  308 tcattaataaaaaggtcgtttgatcccgactttgcttttattttgtgctttttcttg-gaaaatggtaatacaaaaaa 384  Q
    |||||| |  |||||||| ||||||||||||||| |||||||||||||||||||| |  |||||||||||||||||||    
T  25267362 tcattagt-gaaaggtcgcttgatcccgactttg-ttttattttgtgctttttctggaaaaaatggtaatacaaaaaa 25267437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 243 - 384
Target Start/End: Complemental strand, 10719043 - 10718903
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    ||||||||||||| ||||||| | ||||||||| || |||||||||||||| ||   | || ||||||||||| |||||||||| ||| ||||||| ||     
T  10719043 atcctttcgtcccacccgagacggaagtgaacttgtttagggctttttgctgtatctattt-tcatcattaatgaaaaggtcgtcttggtcccgacctt- 10718946  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaaa 384  Q
    ||||||||||||||||||||| | |||||||||||||||||||    
T  10718945 cttttattttgtgctttttctggaaaaatggtaatacaaaaaa 10718903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 243 - 383
Target Start/End: Original strand, 41002108 - 41002247
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    |||||| |||||| ||||||   |||||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||| ||||||||||| |||    
T  41002108 atccttccgtcccacccgaggcaaaagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtcttgatcccgaccttg 41002205  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaa 383  Q
     ||||||||| |||||||||| | ||||||||||||||||||    
T  41002206 tttttattttttgctttttctggaaaaatggtaatacaaaaa 41002247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 243 - 383
Target Start/End: Original strand, 41010890 - 41011029
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    |||||| |||||| ||||||   |||||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||| ||||||||||| |||    
T  41010890 atccttccgtcccacccgaggcaaaagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtcttgatcccgaccttg 41010987  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaa 383  Q
     ||||||||| |||||||||| | ||||||||||||||||||    
T  41010988 tttttattttttgctttttctggaaaaatggtaatacaaaaa 41011029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 385
Target Start/End: Complemental strand, 26383535 - 26383380
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-ttt 328  Q
    ||||||||||||  |||||| ||||||||| ||| |||||||||||  |||||| ||||||| || | | | || ||||||||||||||||||||  |||    
T  26383535 ttttcaaaagaa--tcctttagtcccgcccaagacgaaagtgaacttatgtaggactttttgtttcatgtattt-tcatcattaataaaaaggtcaattt 26383439  T
Q  329 gatcccgactttgctttt--attttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    |||||   ||||  ||||  |||||||||||||||| | ||||||||||||||||||||    
T  26383438 gatcctagctttatttttttattttgtgctttttctggaaaaatggtaatacaaaaaac 26383380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 247 - 385
Target Start/End: Complemental strand, 3241752 - 3241615
Alignment:
Q  247 tttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttgcttt 345  Q
    |||| |||| || |||| ||||| | ||| || |||||||||||||| || | | || |||||| |||||||||| |||||| ||||||||||||| |||    
T  3241752 tttcttcccacctgagacgaaaggggacttgtttagggctttttgctatacgtattt-tcatcactaataaaaag-tcgttttgatcccgactttgtttt 3241655  T
Q  346 tattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||||||||||| | |||| || ||||||||||||    
T  3241654 tattttgtgctttttctggaaaaacggcaatacaaaaaac 3241615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 362
Target Start/End: Original strand, 27884274 - 27884391
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    ||||||||||||| ||||||| ||||||||||| || ||||| ||||||||||| |  ||| ||||||||| |  ||||||||| | |||||||||||||    
T  27884274 atcctttcgtcccacccgagacgaaagtgaacttgtttaggg-tttttgctttatg-tattttcatcattagttgaaaggtcgtctcgatcccgactttg 27884371  T
Q  342 cttttattttgtgctttttct 362  Q
     ||||| ||||||||||||||    
T  27884372 ttttta-tttgtgctttttct 27884391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 381
Target Start/End: Complemental strand, 14395284 - 14395146
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttg 341  Q
    ||||||||||| ||||| ||| ||||||||  |  |  |||||||||||||| | | | ||  |||||||||||||||  |||||| ||||| |||||||    
T  14395284 atcctttcgtctcgcccaagacgaaagtgagtttataaagggctttttgcttcatgtattttccatcattaataaaaaattcgttttgatcctgactttg 14395185  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaa 381  Q
    |||| ||||||||||||||||   ||||||||||||||||    
T  14395184 cttt-attttgtgctttttctgaaaaaatggtaatacaaa 14395146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 377
Target Start/End: Original strand, 17929581 - 17929744
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||| ||||||||||||  || |||||||| |   ||||||||||||   |||||||||||| || | || ||||| ||||||||||| | | || |||    
T  17929581 atgttggtttgttgctttctgtctttcaaaaaa---tcctttcgtcccattcgagatgaaagttaaattgtttaggg-tttttgctttatgtattt-tca 17929675  T
Q  308 tcattaataaaaaggtcgttt-gatcccgactttgcttttattttgtgctttttcttggaaaatggtaata 377  Q
    |||||||| ||| |||||| | ||||||||||||| |||||||| ||||||||||| | ||||||||||||    
T  17929676 tcattaatgaaa-ggtcgtctcgatcccgactttg-ttttatttcgtgctttttctggaaaaatggtaata 17929744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 386
Target Start/End: Complemental strand, 14663536 - 14663493
Alignment:
Q  343 ttttattttgtgctttttcttggaaaatggtaatacaaaaaaca 386  Q
    |||||||||||||||||||| | |||||||||||||||||||||    
T  14663536 ttttattttgtgctttttctggaaaaatggtaatacaaaaaaca 14663493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 384
Target Start/End: Complemental strand, 8201849 - 8201769
Alignment:
Q  305 tcatcattaataaaaaggtcgttt-gatcccgactttgcttttattttgtgctttttcttg-gaaaatggtaatacaaaaaa 384  Q
    ||||||||||| ||| |||||| | ||||||||| ||| |||||||||||||||||||| |  |||||||||||||||||||    
T  8201849 tcatcattaatgaaa-ggtcgtctcgatcccgaccttgtttttattttgtgctttttctggaaaaaatggtaatacaaaaaa 8201769  T

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Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 5952132 - 5952037
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcatt--aataaaaaggtcgttt 328  Q
    |||| |||||||||||| ||||||| |  ||||||||| ||  | |||||||||||| || |||||||| |||||| |  |||||||| |||||||    
T  5952132 aaaaaaacatcctttcgccccgccccaagtgaaagtgagcttatctagggctttttgtttcaagaaattatcatcaataaaataaaaacgtcgttt 5952037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 384
Target Start/End: Complemental strand, 9551517 - 9551439
Alignment:
Q  305 tcatcattaataaaaaggtcgttt-gatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaa 384  Q
    ||||||||||| ||| |||||| | ||||||||| ||| ||| |||||||||||||| | | |||||||||||||||||||    
T  9551517 tcatcattaatgaaa-ggtcgtctcgatcccgaccttg-tttaattttgtgctttttttggaaaaatggtaatacaaaaaa 9551439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 173 - 385
Target Start/End: Complemental strand, 22162 - 21948
Alignment:
Q  173 tgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa--catcctttcgtcccgcccgagatgaaagt 270  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||| || |||| |||| ||  ||||||||||||| |||| ||||||||||    
T  22162 tgttgacgttccttccgatactttttgttcaaataatgtttgtctgttgcttttcgcttttaaaaaaaaaacatcctttcgtcctgccctagatgaaagt 22063  T
Q  271 gaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttggaaaa 369  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||| ||| | ||||||||| |||||||||||    
T  22062 gaactggtgtagggctttttgcttaaag-aattgtcatcattaataaaaaggtcgttttgatcccgactttgttttcactttgtgcttcttcttggaaaa 21964  T
Q  370 tggtaatacaaaaaac 385  Q
    ||||||||||||||||    
T  21963 tggtaatacaaaaaac 21948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 2e-71; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 173 - 385
Target Start/End: Original strand, 21691748 - 21691962
Alignment:
Q  173 tgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa--catcctttcgtcccgcccgagatgaaagt 270  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||| || |||| |||| ||  ||||||||||||| |||| ||||||||||    
T  21691748 tgttgacgttccttccgatactttttgttcaaataatgtttgtctgttgcttttcgcttttaaaaaaaaaacatcctttcgtcctgccctagatgaaagt 21691847  T
Q  271 gaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttggaaaa 369  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||| ||| | ||||||||| |||||||||||    
T  21691848 gaactggtgtagggctttttgcttaaag-aattgtcatcattaataaaaaggtcgttttgatcccgactttgttttcactttgtgcttcttcttggaaaa 21691946  T
Q  370 tggtaatacaaaaaac 385  Q
    ||||||||||||||||    
T  21691947 tggtaatacaaaaaac 21691962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 240 - 385
Target Start/End: Complemental strand, 7258216 - 7258069
Alignment:
Q  240 aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg--tttgatcccgac 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||    
T  7258216 aacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttactttaagaaattgtcatcattaataaaaaggtcgtttttgatcccgac 7258117  T
Q  338 tttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7258116 tttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 7258069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 140 - 385
Target Start/End: Original strand, 25529354 - 25529599
Alignment:
Q  140 gacacatggggtggtcagccgtaattggaccgttgttgacgttccttccgctactttt-tgttcaaataatgt--ttgtttgttgctttgcgtttttcaa 236  Q
    ||||||||| ||||  ||||||||||||  || ||||||||||||||||||||||  | ||||||||||||||  |||||||||||||| |   ||||||    
T  25529354 gacacatggagtggatagccgtaattgggtcgctgttgacgttccttccgctactcatctgttcaaataatgtgtttgtttgttgcttttcacgtttcaa 25529453  T
Q  237 aagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccg 335  Q
    || ||  |  |||||||| |||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  25529454 aaaaa--ttatttcgtcctgcccgagatgtaagtgaacttgtgtagggctttttgctttaag-aattgtcatcattaataaaaaggtcgttttgatcccg 25529550  T
Q  336 actttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    |||||| |||||||||||||||||||| | ||||||||||||||||||||    
T  25529551 actttg-ttttattttgtgctttttctggaaaaatggtaatacaaaaaac 25529599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 235 - 383
Target Start/End: Complemental strand, 12391483 - 12391334
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaat-aaaaaggtcg-tttgatc 332  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| |||||||    
T  12391483 aaaaaaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag-aattgtcatcatttataaaaaaggtcgttttgatc 12391385  T
Q  333 ccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaa 383  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12391384 ccgactttgcttttattttgtgctttttcttggaaaatggtaacacaaaaa 12391334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 232 - 384
Target Start/End: Original strand, 7790829 - 7790979
Alignment:
Q  232 ttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttga 330  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   ||||||||||| |||||    
T  7790829 ttcaaaaaaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttactttaagaaattgtcatcat---taaaaaggtcgttttga 7790925  T
Q  331 tcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaa 384  Q
    ||||| ||||| ||| | ||||||||| ||||||||||||||||||||||||||    
T  7790926 tcccgcctttgttttcactttgtgcttcttcttggaaaatggtaatacaaaaaa 7790979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 175 - 385
Target Start/End: Complemental strand, 20096978 - 20096758
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttc------------aaaagaacatcctttcgtcccgcccgag 262  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||             |||| |||||||||||||||||||||||    
T  20096978 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgcttttcgcttttttttttttttaaaaaaaaaacatcctttcgtcccgcccgag 20096879  T
Q  263 atgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttc 361  Q
    |||||||||| || |||||||||||||| ||||||| | | ||||||||||| |||||||||| |||||||||||||||  |||||||||||||||||||    
T  20096878 atgaaagtgatcttgtgtagggcttttt-ctttaagtattggtcatcattaacaaaaaggtcgttttgatcccgacttt-attttattttgtgctttttc 20096781  T
Q  362 ttggaaaatggtaatacaaaaaac 385  Q
     || ||||||||||||||||||||    
T  20096780 -tgaaaaatggtaatacaaaaaac 20096758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 175 - 385
Target Start/End: Original strand, 36451007 - 36451227
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa-----------catcctttcgtcccgcccgaga 263  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||| || ||||||||| ||           ||||||||||||||||| ||||    
T  36451007 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgattttcgcttttcaaaaaaaaaaaaaaaaaacatcctttcgtcccgcctgaga 36451106  T
Q  264 tgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttct 362  Q
    ||||| ||| || |||||||||||||||||||||| | | |||||| ||||||||||||||| ||| |||||||||||  |||||||||||||||||||     
T  36451107 tgaaattgatcttgtgtagggctttttgctttaagtattggtcatctttaataaaaaggtcgttttaatcccgacttt-attttattttgtgctttttc- 36451204  T
Q  363 tggaaaatggtaatacaaaaaac 385  Q
    || ||||||||||||||||||||    
T  36451205 tgaaaaatggtaatacaaaaaac 36451227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 235 - 385
Target Start/End: Original strand, 1802134 - 1802285
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcc 333  Q
    |||| ||||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||    
T  1802134 aaaaaaacatcctttcatcccgcccaggatgaaagtgaactagtgtagggctttttgctttaag-atttgtcatcattaataaaaaggtcgttttgatcc 1802232  T
Q  334 cgactttgcttttattttgtgctttttcttgg-aaaatggtaatacaaaaaac 385  Q
    |||||||  ||| ||||||||||||||||||| ||||||||||||||||||||    
T  1802233 cgactttattttcattttgtgctttttcttggaaaaatggtaatacaaaaaac 1802285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 20380764 - 20380938
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||  ||| || ||||||| ||||| ||||||||||||||||| |  | ||||||||||||||||| |  ||| |||    
T  20380764 atgtttgtttgttgctttatgttttttcaaaaaaaatccttttgtcccacccgagatgaaagtgaattcatctagggctttttgctttatg-tattttca 20380862  T
Q  308 tcattaataaaaaggtcgtttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    |||||| |  |||||||| ||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||    
T  20380863 tcattagt-gaaaggtcgcttgatcccgactttg-ttttattttgtgctttttctggaaaaatggtaatacaaaaaac 20380938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 243 - 384
Target Start/End: Complemental strand, 33841697 - 33841558
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgtttgatcccgactttgc 342  Q
    ||||||||||||| ||||||| | || |||||| || ||||||||||||||||  | | || ||||||||||| ||||||||| |||||||||||||||     
T  33841697 atcctttcgtcccacccgagacggaattgaacttgtttagggctttttgcttttcgtattt-tcatcattaatgaaaaggtcgcttgatcccgactttg- 33841600  T
Q  343 ttttattttgtgctttttcttggaaaatggtaatacaaaaaa 384  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  33841599 ttttattttgtgctttttctggaaaaatggtaatacaaaaaa 33841558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 244 - 384
Target Start/End: Original strand, 29897499 - 29897645
Alignment:
Q  244 tcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttg- 341  Q
    |||||||||||||||| ||| |||||||||||  ||||||||||||||||| | | || ||||||||||||||||||||||| ||||||||||||||||     
T  29897499 tcctttcgtcccgcccaagacgaaagtgaacttatgtagggctttttgcttcatg-aactgtcatcattaataaaaaggtcgttttgatcccgactttgt 29897597  T
Q  342 -----cttttattttgtgctttttcttggaaaatggtaatacaaaaaa 384  Q
          ||||||||||||||| |||||| |||||||||||||||||||    
T  29897598 tttttattttattttgtgcttcttcttgaaaaatggtaatacaaaaaa 29897645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 243 - 318
Target Start/End: Original strand, 37581646 - 37581720
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  37581646 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag-aattgtcatcattaataaa 37581720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 208 - 384
Target Start/End: Complemental strand, 27230434 - 27230261
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||| ||| || ||||||| ||||| ||||||| ||||||||| |  | ||||||||||||||||| |  ||| |||    
T  27230434 atgtttgtttgttgctttatgtttttccaaaaaa-atccttttgtcccccccgagacgaaagtgaattcatctagggctttttgctttatg-tattttca 27230337  T
Q  308 tcattaataaaaaggtcgtttgatcccgactttgcttttattttgtgctttttcttg-gaaaatggtaatacaaaaaa 384  Q
    ||||||||  |||||||| ||||||||||||||| |||||||||||||||||||| |  |||||||||||||||||||    
T  27230336 tcattaat-gaaaggtcgcttgatcccgactttg-ttttattttgtgctttttctggaaaaaatggtaatacaaaaaa 27230261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 208 - 386
Target Start/End: Complemental strand, 11810227 - 11810052
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||| ||| || ||||||||||||| ||||||  || |||||| | || ||||| ||||||||||| | | || |||    
T  11810227 atgtttgtttgttgctttatgtttttccaaaaaa-atcctttcgtcccacccgaggcgagagtgaatttgtttagggatttttgctttatgtattt-tca 11810130  T
Q  308 tcattaataaaaaggtcgt-ttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaaca 386  Q
    |||||| | ||| |||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||    
T  11810129 tcattagtgaaa-ggtcgtcttgatcccgactttg-ttttattttgtgctttttctggaaaaatggtaatacaaaaaaca 11810052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 208 - 386
Target Start/End: Complemental strand, 12177381 - 12177206
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtca 307  Q
    ||||||||||||||||||  ||||||| ||| || ||||||||||||| ||||||  || |||||| | || ||||| ||||||||||| | | || |||    
T  12177381 atgtttgtttgttgctttatgtttttccaaaaaa-atcctttcgtcccacccgaggcgagagtgaatttgtttagggatttttgctttatgtattt-tca 12177284  T
Q  308 tcattaataaaaaggtcgt-ttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaaca 386  Q
    |||||| | ||| |||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||    
T  12177283 tcattagtgaaa-ggtcgtcttgatcccgactttg-ttttattttgtgctttttctggaaaaatggtaatacaaaaaaca 12177206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 195 - 385
Target Start/End: Complemental strand, 26086165 - 26085977
Alignment:
Q  195 ttttgttcaaataat--gtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgc 292  Q
    |||||||||||||||  ||||||||||||||||  ||||||| ||| ||  |||||||||||| ||||||  || |||||| | || ||||| |||||||    
T  26086165 ttttgttcaaataatatgtttgtttgttgctttatgtttttccaaaaaa--tcctttcgtcccacccgaggcgagagtgaatttgtttagggatttttgc 26086068  T
Q  293 tttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    |||| | | || ||||||||| | ||| |||||| ||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||    
T  26086067 tttatgtattt-tcatcattagtgaaa-ggtcgtcttgatcccgactttg-ttttattttgtgctttttctggaaaaatggtaatacaaaaaac 26085977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 243 - 384
Target Start/End: Complemental strand, 21864200 - 21864058
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggcttttt-gctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgacttt 340  Q
    ||||||||||||| ||||||| | ||||||| | || ||||||||||| |||||| | | || ||||||||||| |||| |||| |||| | ||||||||    
T  21864200 atcctttcgtcccacccgagacggaagtgaatttgtttagggcttttttgctttatgtattt-tcatcattaattaaaaagtcgctttgtttccgacttt 21864102  T
Q  341 gcttttattttgtgctttttcttggaaaatggtaatacaaaaaa 384  Q
    | |||||||||||||||||||| | |||||||||||||||||||    
T  21864101 gtttttattttgtgctttttctggaaaaatggtaatacaaaaaa 21864058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 235 - 385
Target Start/End: Complemental strand, 22954942 - 22954790
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggct--ttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgat 331  Q
    |||| ||||||||||||||||  |||||| |||||| ||||  |||||||||  ||||||||||||  || |||||||||||||||||||||| ||||||    
T  22954942 aaaaaaacatcctttcgtcccatccgagacgaaagtaaacttatgtagggctttttttgctttaag-tatggtcatcattaataaaaaggtcgttttgat 22954844  T
Q  332 cccgactttgcttttattttgtgctttttcttg-gaaaatggtaatacaaaaaac 385  Q
    || ||| ||| |||||||||||||||||| | |  ||||||||||||||||||||    
T  22954843 cctgac-ttgattttattttgtgctttttatggaaaaaatggtaatacaaaaaac 22954790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 243 - 383
Target Start/End: Complemental strand, 24961551 - 24961412
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    |||||| |||||| ||||||  ||||||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||| ||||||||||| |||    
T  24961551 atccttccgtcccacccgaggcgaaagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtcttgatcccgaccttg 24961454  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaa 383  Q
     ||||||||| |||||||||| | ||||||||||||||||||    
T  24961453 tttttattttttgctttttctggaaaaatggtaatacaaaaa 24961412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 28847624 - 28847765
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    |||||| |||||| ||||||  || |||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||| ||||||||||| | |    
T  28847624 atccttccgtcccacccgaggcgagagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtcttgatcccgacctcg 28847721  T
Q  342 cttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
     |||||||||||||||||||| | ||||||||||||||||||||    
T  28847722 tttttattttgtgctttttctggaaaaatggtaatacaaaaaac 28847765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 385
Target Start/End: Original strand, 23639998 - 23640078
Alignment:
Q  305 tcatcattaataaaaaggtcgt-ttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||||| |||||||||| ||| ||||||| || ||||||||||||||||||||| | ||||||||||| ||||||||    
T  23639998 tcatcattaatgaaaaggtcgtcttggtcccgacctt-cttttattttgtgctttttctggaaaaatggtaatgcaaaaaac 23640078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 385
Target Start/End: Complemental strand, 23832888 - 23832808
Alignment:
Q  305 tcatcattaataaaaaggtcgt-ttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||||| |||||||||| ||| ||||||| || ||||||||||||||||||||| | ||||||||||| ||||||||    
T  23832888 tcatcattaatgaaaaggtcgtcttggtcccgacctt-cttttattttgtgctttttctggaaaaatggtaatgcaaaaaac 23832808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 384
Target Start/End: Complemental strand, 21992603 - 21992463
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttg 341  Q
    ||||||||||||| ||||||  || |||||| | || ||||| ||||||||||| |  ||| ||||||||| |  ||||||||| | ||||||||| |||    
T  21992603 atcctttcgtcccacccgaggcgagagtgaatttgtttagggatttttgctttatg-tattttcatcattagt-gaaaggtcgtctcgatcccgaccttg 21992506  T
Q  342 cttttattttgtgctttttcttg-gaaaatggtaatacaaaaaa 384  Q
     |||||||||||||||||||| |  |||||||||||||||||||    
T  21992505 -ttttattttgtgctttttctggaaaaaatggtaatacaaaaaa 21992463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 158 - 385
Target Start/End: Complemental strand, 969 - 746
Alignment:
Q  158 ccgtaattggaccgttgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgc 257  Q
    ||||||||||  |||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||     |   |||| |||||||||||||||| |    
T  969 ccgtaattgggtcgttgttgacgttcattcggctactttttgttcaaatgatgtttgtttgttgcttt-----taaaaaaaaaacatcctttcgtcccac 875  T
Q  258 ccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttg-cttttattttgtgc 355  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||    
T  874 ccgagatgaaagtgaactggtgtcgggctttttgctttaag-aattgtcatcattaataaaaaggtcgttttgatcccgactttgttttttattttgtgc 776  T
Q  356 tttttcttggaaaatggtaatacaaaaaac 385  Q
    |  |||||||||||||||||||||||||||    
T  775 tccttcttggaaaatggtaatacaaaaaac 746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 125; Significance: 3e-64; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 173 - 385
Target Start/End: Complemental strand, 30987 - 30774
Alignment:
Q  173 tgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtga 272  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||| ||||||| |||||||||    
T  30987 tgttgacgttccgtccgctactttttgttcaaataatgtttgtctgttgcttttcgcttttcaaaa-aacatcctttcgtcctgcccgaggtgaaagtga 30889  T
Q  273 actggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttgg--aaaa 369  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| ||| |||||||||||||   |||  ||||    
T  30888 actggtgtagagctttttgctttaag-aattgtcatcattaataaaaaagtcgttttgatcccgactttgttttcattttgtgcttttctctggaaaaaa 30790  T
Q  370 tggtaatacaaaaaac 385  Q
    |||||||| |||||||    
T  30789 tggtaataaaaaaaac 30774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 123; Significance: 5e-63; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 173 - 384
Target Start/End: Complemental strand, 19974 - 19762
Alignment:
Q  173 tgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtga 272  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||| ||| || ||||||||| || ||||||||||||| ||||||||||||||||    
T  19974 tgttgacgttcattccactactttttgttcaaataatgtttgtttgttgtttttcgcttttcaaaaaaa-atcctttcgtcccacccgagatgaaagtga 19876  T
Q  273 actggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgc-tttttcttg-gaaaa 369  Q
    ||| ||||| |||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| ||| ||||||||| |||||||||  ||||    
T  19875 acttgtgtatggctttttgctttaag-aattgtcatcattaataaaaatgtcgttttgatcccgactttgttttcattttgtgcttttttcttgaaaaaa 19777  T
Q  370 tggtaatacaaaaaa 384  Q
    |||||||||||||||    
T  19776 tggtaatacaaaaaa 19762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 113; Significance: 5e-57; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 175 - 383
Target Start/End: Complemental strand, 3665 - 3452
Alignment:
Q  175 ttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa------catcctttcgtcccgcccgagatgaaa 268  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| || |||| |||| ||      |||||||||||| ||||||||||||||    
T  3665 ttgacgttccttccgctactttttgttcaattaatgtttgtttgttgcttttcgcttttaaaaaaaaaaaaaacatcctttcgtctcgcccgagatgaaa 3566  T
Q  269 gtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttggaa 367  Q
    |||| || |||||||||||||||||||||| | | |||||||||||||||||||||| ||||||||| |||||  ||||||||||||||||||| || ||    
T  3565 gtgatcttgtgtagggctttttgctttaagtattggtcatcattaataaaaaggtcgttttgatcccaacttt-attttattttgtgctttttc-tgaaa 3468  T
Q  368 aatggtaatacaaaaa 383  Q
    ||||||||||||||||    
T  3467 aatggtaatacaaaaa 3452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 230 - 384
Target Start/End: Original strand, 14968 - 15123
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-ttt 328  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||    
T  14968 ttttcaaaaaaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaag-aattgtcatcattaataaaaaggttgtttt 15066  T
Q  329 gatcccgactttg-cttttattttgtgctttttcttggaaaatggtaatacaaaaaa 384  Q
    |||||| ||||||  |||||||||||||||||||| | |||||||||||||||||||    
T  15067 gatcccaactttgttttttattttgtgctttttctggaaaaatggtaatacaaaaaa 15123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0435 (Bit Score: 106; Significance: 7e-53; HSPs: 1)
Name: scaffold0435
Description:

Target: scaffold0435; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 230 - 385
Target Start/End: Complemental strand, 11950 - 11795
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaa-aggtcg-tt 327  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| ||    
T  11950 ttttcaaaa-aacatcctttcgtcccgcccgagatgatagtgaactggtgtagggctttttgctttaag-aattgtcatcattaataaaagtggtcgttt 11853  T
Q  328 tgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||||||||  || |||||||||||||||||||||||||||||||||||||||    
T  11852 tgatcccgactttgtcttcattttgtgctttttcttggaaaatggtaatacaaaaaac 11795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 195 - 385
Target Start/End: Original strand, 18399 - 18590
Alignment:
Q  195 ttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaa--catcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgc 292  Q
    |||||||||| |||||||||||||||||||| || |||| |||| ||  ||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  18399 ttttgttcaattaatgtttgtttgttgcttttcgcttttaaaaaaaaaacatcctttcgtcccgcccgagatgaaagtgatcttgtgtagggctttttgc 18498  T
Q  293 tttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||| || | | |||||||||||||||||||||| |||||| ||||||||  ||||||||||||||||||| || ||||||||||||||||||||    
T  18499 tttgagtattggtcatcattaataaaaaggtcgttttgattccgacttt-attttattttgtgctttttc-tgaaaaatggtaatacaaaaaac 18590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 100; Significance: 3e-49; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 145 - 284
Target Start/End: Original strand, 17658 - 17796
Alignment:
Q  145 atggggtggtcagccgtaattggaccgttgttgacgttccttccgctactttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaacat 244  Q
    |||| ||||| ||||||||||||  || ||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||    
T  17658 atggagtggttagccgtaattgggtcgctgttgacattccttccgctactttttgttcaaataatgtttgtttgttgcttttcgcttttcaaaa-aacat 17756  T
Q  245 cctttcgtcccgcccgagatgaaagtgaactggtgtaggg 284  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17757 cctttcgtcccgcccgagatgaaagtgaactggtgtaggg 17796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 17796 - 17854
Alignment:
Q  329 gatcccgactttgcttttattttgtgctttttcttgg--aaaatggtaatacaaaaaac 385  Q
    ||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  17796 gatcccgactttgtttttattttgtgctttttcttgggaaaaatggtaatacaaaaaac 17854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1197 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold1197
Description:

Target: scaffold1197; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 230 - 385
Target Start/End: Original strand, 32 - 188
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-ttt 328  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |  ||||||||||||||||||||||||| |||    
T  32 ttttcaaaaaaacatcatttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgcttcatg-cattgtcatcattaataaaaaggtcgtttt 130  T
Q  329 gatcccgactttgcttttattttgtgctttttcttg--gaaaatggtaatacaaaaaac 385  Q
    ||||||||||||| ||| ||||||||| ||||||||   ||||||||||||||||||||    
T  131 gatcccgactttgttttcattttgtgc-ttttcttgaaaaaaatggtaatacaaaaaac 188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 89; Significance: 9e-43; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 230 - 385
Target Start/End: Original strand, 32085 - 32238
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-ttt 328  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||||| ||||||||||||| || |||    
T  32085 ttttcaaaa-aacatcctttcgtcccgcccgagatgaaagtgaactggtgaagggctttttgcttttag-cattgtcataattaataaaaaggccgtttt 32182  T
Q  329 gatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||||||||||  |||||||||||||||||||  | ||||||||||||||||||||    
T  32183 gatcccgacttt-attttattttgtgctttttcaggaaaaatggtaatacaaaaaac 32238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 86; Significance: 6e-41; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 230 - 385
Target Start/End: Original strand, 743 - 897
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-ttt 328  Q
    ||||||||| || ||||||||||||||| | ||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||| |||    
T  743 ttttcaaaaaaa-atcctttcgtcccgcacaagatgaaagtgaactggtgtagggc-ttttgctttaa-agattgtcatcattaataaaaaggtcgtttt 839  T
Q  329 gatcccgactttgcttttattttgtgctttttcttggaaaatggt-aatacaaaaaac 385  Q
    |||||| | |||| ||| ||||||||||||||||||||||||||| ||||||||||||    
T  840 gatcccaattttgttttcattttgtgctttttcttggaaaatggtaaatacaaaaaac 897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 375
Target Start/End: Complemental strand, 183460 - 183328
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttg 341  Q
    ||||||||||||||||| ||| |||||||||||  | ||||||||||||||| | | |  |  ||||||||||||||  |||| || ||||  |||||||    
T  183460 atcctttcgtcccgcccaagacgaaagtgaacttatttagggctttttgcttcaggcatgttccatcattaataaaa--gtcgcttcgatcgtgactttg 183363  T
Q  342 ct-tttattttgtgctttttcttggaaaatggtaa 375  Q
    || ||||||||||| ||||||| | ||||||||||    
T  183362 ctctttattttgtgttttttctagaaaaatggtaa 183328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 251 - 386
Target Start/End: Complemental strand, 191537 - 191401
Alignment:
Q  251 gtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttgcttttatt 349  Q
    ||||||||||||| ||||||||||| ||||||  |||||||||||||| | ||||||||||||||||||||||||||| || |||||||||| |||||||    
T  191537 gtcccgcccgagacgaaagtgaacttgtgtagaactttttgctttaagca-ttgtcatcattaataaaaaggtcgttttgaccccgactttgtttttatt 191439  T
Q  350 ttgtgctttttcttgg-aaaatggtaatacaaaaaaca 386  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  191438 ttgtgctttttcttggaaaaatggtaaaacaaaaaaca 191401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 235 - 385
Target Start/End: Original strand, 32548 - 32702
Alignment:
Q  235 aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcc 333  Q
    |||| |||||||||||||||||||||||| |||||||||||  ||||||||||||||| ||||| ||||| |||||||||||||||||||| ||||||||    
T  32548 aaaaaaacatcctttcgtcccgcccgagacgaaagtgaacttatgtagggctttttgcattaag-aattgccatcattaataaaaaggtcgttttgatcc 32646  T
Q  334 cgactttg-cttttattttgtgctttttcttgg---aaaatggtaatacaaaaaac 385  Q
    ||||||||  |||||||||||||||||| |  |   ||||||||||||||||||||    
T  32647 cgactttgttttttattttgtgctttttttctgaaaaaaatggtaatacaaaaaac 32702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 33285 - 33172
Alignment:
Q  75 cttttcgaaggttgaattcagacacgcaagataatccactaacgggttatattccttggtattgcgacacatggggtggtcagccgtaattggaccgttg 174  Q
    ||||||||||||||||||||||| |||||||||||||||||||  |||||||||| |||||||||||||||||| ||| | ||||||||||||  |||||    
T  33285 cttttcgaaggttgaattcagacgcgcaagataatccactaacatgttatattccctggtattgcgacacatggagtgtttagccgtaattgggtcgttg 33186  T
Q  175 ttgacgttccttcc 188  Q
    ||||||||||||||    
T  33185 ttgacgttccttcc 33172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 76; Significance: 5e-35; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 196 - 385
Target Start/End: Complemental strand, 8679 - 8489
Alignment:
Q  196 tttgttcaaataatgt-ttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctt 294  Q
    ||||||||| |||| | ||||||||||||||  ||||| ||||| || ||||||||||||| ||||||| ||||||||||| || ||||||||||| |||    
T  8679 tttgttcaattaatatgttgtttgttgctttatgttttacaaaaaaaaatcctttcgtcccacccgagacgaaagtgaacttgtttagggctttttcctt 8580  T
Q  295 taagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    || |  ||| |||||||||||||||   ||| |||||||||||||||| |||||  |||||||| ||||||||||||||||||||| |||||    
T  8579 tacg-tattttcatcattaataaaataatcgctttgatcccgactttgtttttaccttgtgcttgttcttggaaaatggtaatacataaaac 8489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 212 - 320
Target Start/End: Original strand, 11062 - 11169
Alignment:
Q  212 ttgtttgttgctttgcgtttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcat 311  Q
    ||||||||||||||  ||||||||||| || || |||||||||| |||| || |||||||||||  | ||||| ||||||||||| |  ||| |||||||    
T  11062 ttgtttgttgctttatgtttttcaaaaaaaaattctttcgtcccacccgtgacgaaagtgaacttatttaggggtttttgctttacg-tattttcatcat 11160  T
Q  312 taataaaaa 320  Q
    |||||||||    
T  11161 taataaaaa 11169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 16828 - 16723
Alignment:
Q  280 tagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt-gatcccgactttgcttttattttgtgctttttcttggaaaatggtaatac 378  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  16828 tagggctttttgctttaagaattt-tcatcattaataaaaaggtcgttttgatcccgactttgtttttattttttgcttcttcttggaaaatggtaatac 16730  T
Q  379 aaaaaac 385  Q
    |||||||    
T  16729 aaaaaac 16723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0441 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0441
Description:

Target: scaffold0441; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 7211 - 7358
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttg 341  Q
    ||||||||||||||||| ||| |||||||||||  |||||||||||||||||||||  || |||||| ||||||||||||||| ||||||||||||||||    
T  7211 atcctttcgtcccgcccaagacgaaagtgaacttatgtagggctttttgctttaag-tatcgtcatcgttaataaaaaggtcgttttgatcccgactttg 7309  T
Q  342 ctttt-attttgtg---ctttttcttgg-aaaatggtaatacaaaaaac 385  Q
     |||| ||||||||    |||||||||| ||||||||||||||||||||    
T  7310 tttttcattttgtgtttttttttcttggaaaaatggtaatacaaaaaac 7358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 140 - 381
Target Start/End: Original strand, 152900 - 153143
Alignment:
Q  140 gacacatggggtggtcagccgtaattggaccgttgttgacgttccttccgctactt-tttgttcaaataatgt--ttgtttgttgctttgcgtttttcaa 236  Q
    ||||| ||| ||||| ||||| ||||||  || |||||| ||| ||| |||||||  ||||||||||||||||  |||||||||| |||  |||||||||    
T  152900 gacacttggagtggttagccgcaattgggtcgctgttgatgtttctttcgctactcatttgttcaaataatgtgtttgtttgttgttttctgtttttcaa 152999  T
Q  237 aagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccg 335  Q
    || || ||||||||||  ||||||||| ||||||||||| ||||||||||||||||||   | | ||  |||||||||| |||| | || ||||||||||    
T  153000 aaaaa-atcctttcgtttcgcccgagacgaaagtgaacttgtgtagggctttttgcttcttgtattttccatcattaattaaaaagccgttttgatcccg 153098  T
Q  336 actttgcttttattttgtgctttttcttggaaaatggtaatacaaa 381  Q
    || ||| ||| ||||| |||||||||| | ||||||||||||||||    
T  153099 accttg-tttcattttatgctttttctggaaaaatggtaatacaaa 153143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 75417 - 75563
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgactttg 341  Q
    ||||||||||||||||| ||| |||||||||||  |||||||||||||||||||||  || |||||| ||||||||||||||| ||||||||| ||||||    
T  75417 atcctttcgtcccgcccaagacgaaagtgaacttatgtagggctttttgctttaag-catcgtcatcgttaataaaaaggtcgttttgatcccaactttg 75515  T
Q  342 ctttt-attttgtg--ctttttcttgg-aaaatggtaatacaaaaaac 385  Q
     |||| ||||||||   |||||||||| ||||||||||||||||||||    
T  75516 tttttcattttgtgttttttttcttggaaaaatggtaatacaaaaaac 75563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0582 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0582
Description:

Target: scaffold0582; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 230 - 385
Target Start/End: Complemental strand, 4544 - 4389
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgttt- 328  Q
    ||||||||| || |||||||||||||||| |||| |||||||||||  | ||||||||||||||| | | |  |  |||||||||||||||| ||| ||     
T  4544 ttttcaaaaaaa-atcctttcgtcccgcctgagacgaaagtgaactcatttagggctttttgcttcatgcatcttccatcattaataaaaag-tcgattc 4447  T
Q  329 gatcccgactttgcttttattttgtgctttttcttggaaaatggt-aatacaaaaaac 385  Q
    ||||||||||||| |||||||||||||||||||| | |||||||| ||||||||||||    
T  4446 gatcccgactttgtttttattttgtgctttttctagaaaaatggtaaatacaaaaaac 4389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 165950 - 166093
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggcttttt-gctttaagaaattgtcatcattaataaaaaggtcg-tttgatcccgacttt 340  Q
    ||||||||||||| |||||||   ||||||||| || ||||||||||| |||||  |   || ||||||||||| |||| |||| |||||||||||||||    
T  165950 atcctttcgtcccacccgagactgaagtgaacttgtttagggcttttttgctttgtgtcttt-tcatcattaattaaaaagtcgctttgatcccgacttt 166048  T
Q  341 gcttttattttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    | |||||||||||||||||||| | ||||||||||||||||||||    
T  166049 gtttttattttgtgctttttctagaaaaatggtaatacaaaaaac 166093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 12489 - 12633
Alignment:
Q  243 atcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgtttgatcccgactttgc 342  Q
    ||||||||||||||||| ||| |||||||||||  | ||||||||||||||| | | |  |  ||||||||||||||||    |||||||||||||||||    
T  12489 atcctttcgtcccgcccaagacgaaagtgaacttatttagggctttttgcttcaggcatgttccatcattaataaaaagtcactttgatcccgactttgc 12588  T
Q  343 tttta--ttttgtgctttttcttggaaaatggtaatacaaaaaac 385  Q
    ||||   ||||||| ||||||| | ||||||||||||||||||||    
T  12589 tttttatttttgtgttttttctagaaaaatggtaatacaaaaaac 12633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 384
Target Start/End: Complemental strand, 70899 - 70724
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttc-aaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtc 306  Q
    ||||||||||||||||||  |||| || |||| || |||||| |||||| ||||||  | ||||||||| || ||||||||||||||||| | | || ||    
T  70899 atgtttgtttgttgctttatgtttgtccaaaaaaaaatccttccgtcccacccgaggcgcaagtgaacttgtttagggctttttgctttatgtattt-tc 70801  T
Q  307 atcattaataaaaaggtcgttt-gatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaaa 384  Q
    |||| |||| ||| |||||| | |||||| || ||| |||||||||||||||||||| | |||||||||||||||||||    
T  70800 atcactaatgaaa-ggtcgtctcgatcccaaccttg-ttttattttgtgctttttctggaaaaatggtaatacaaaaaa 70724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 383
Target Start/End: Complemental strand, 5063 - 4887
Alignment:
Q  208 atgtttgtttgttgctttgcgtttttcaaaagaaca---tcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattg 304  Q
    ||||||||||||||||||  ||||||||||| || |   |||||||||||  ||||||  ||||||||| | || |||||||| |||||||| | | ||     
T  5063 atgtttgtttgttgctttatgtttttcaaaaaaaaaaaatcctttcgtcctacccgaggcgaaagtgaatttgtttagggcttcttgctttatgtattt- 4965  T
Q  305 tcatcattaataaaaaggtcgt-ttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatacaaaaa 383  Q
    |||| ||| || ||| |||||| ||||||||||| ||| |||||||||||||||||||| | ||||||||||||||||||    
T  4964 tcattattgatgaaa-ggtcgtcttgatcccgaccttg-ttttattttgtgctttttctggaaaaatggtaatacaaaaa 4887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 280 - 383
Target Start/End: Complemental strand, 59788 - 59686
Alignment:
Q  280 tagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaatac 378  Q
    ||||||||||||||||| | | || ||||||||||| ||| |||||| ||||||||||| ||| |||||||||||||||||||| | |||||||||||||    
T  59788 tagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgtcttgatcccgaccttgtttttattttgtgctttttctggaaaaatggtaatac 59691  T
Q  379 aaaaa 383  Q
    |||||    
T  59690 aaaaa 59686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0551 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0551
Description:

Target: scaffold0551; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 9420 - 9354
Alignment:
Q  230 ttttcaaaagaacatcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaa 297  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  9420 ttttcaaaa-aacatcctttcgtcccgcccgagacgaaagtgaactcatgtagggctttttgctttaa 9354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 194 - 377
Target Start/End: Complemental strand, 28688 - 28502
Alignment:
Q  194 tttttgttcaaataatgtttgtttgttgctttgcgtttttcaaaagaaca----tcctttcgtcccgcccgagatgaaagtgaactggtgtagggctttt 289  Q
    |||||||||||||||||| ||||||||   ||  ||||||||||| || |    ||||||||||| ||| ||||  |||||||||| |||| ||||| ||    
T  28688 tttttgttcaaataatgtgtgtttgttatcttatgtttttcaaaaaaaaaaaaatcctttcgtcctgcctgagacaaaagtgaacttgtgttgggctgtt 28589  T
Q  290 tgctttaagaaattgtcatcattaataaaaaggtcgtttgatcccgactttgcttttattttgtgctttttcttggaaaatggtaata 377  Q
     |||| | | | ||  ||||||||||||||||    |||||||||||||||| ||||||||||||||||| || | ||||||||||||    
T  28588 -gcttcatgtattttccatcattaataaaaagtcattttgatcccgactttgtttttattttgtgcttttcctggaaaaatggtaata 28502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 383
Target Start/End: Original strand, 125564 - 125696
Alignment:
Q  250 cgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataaaaaggtcgt-ttgatcccgactttgcttttat 348  Q
    |||||| ||||||  || |||||| | || ||||||||||||||||| | | || ||||||||||| ||| |||||  ||||||||||| ||| ||||||    
T  125564 cgtcccacccgaggcgagagtgaatttgtttagggctttttgctttatgtattt-tcatcattaatgaaa-ggtcgacttgatcccgaccttgtttttat 125661  T
Q  349 tttgtgctttttcttggaaaatggtaatacaaaaa 383  Q
    |||||||||||||| | ||||||||||||||||||    
T  125662 tttgtgctttttctggaaaaatggtaatacaaaaa 125696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 247 - 384
Target Start/End: Original strand, 302241 - 302375
Alignment:
Q  247 tttcgtcccgcccgagatgaaagtgaactggtgtagggctttttgctttaagaaattgtcatcattaataa-aaaggtcgtttgatcccgactttgcttt 345  Q
    ||||||||||||| ||| |||||||||||  | ||||||||||||||| | | | ||  |||||||||||| |||| |  ||||||||||||||||        
T  302241 tttcgtcccgcccaagacgaaagtgaacttatttagggctttttgcttcaggcattttccatcattaataagaaagttgttttgatcccgactttg---- 302336  T
Q  346 tattttgtgctttttcttgg-aaaatggtaatacaaaaaa 384  Q
      |||||||||||||  ||| |||||||||||||||||||    
T  302337 -tttttgtgcttttttatggaaaaatggtaatacaaaaaa 302375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 385
Target Start/End: Original strand, 19520 - 19601
Alignment:
Q  305 tcatcattaataaaaaggtcgttt-gatcccgactttgcttttattttgtgctttttcttg-gaaaatggtaatacaaaaaac 385  Q
    ||||||||||| ||| |||||| | ||||||||||||| |||||||||||||||||||| |  |||||||||||||| |||||    
T  19520 tcatcattaatgaaa-ggtcgtctcgatcccgactttgtttttattttgtgctttttctggaaaaaatggtaatacagaaaac 19601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 385
Target Start/End: Original strand, 3611 - 3692
Alignment:
Q  305 tcatcattaataaaaaggtcgt-ttgatcccgactttgcttttattttgtgctttttcttg-gaaaatggtaatacaaaaaac 385  Q
    |||||||||||  ||||||||| ||||||||||| ||| |||||||||||| ||||||| |  |||||||| |||||||||||    
T  3611 tcatcattaattgaaaggtcgtcttgatcccgaccttg-ttttattttgtgttttttctggaaaaaatggttatacaaaaaac 3692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 351
Target Start/End: Original strand, 4242 - 4330
Alignment:
Q  265 gaaagtgaactggtgtagggctttttgctttaagaaattgtcatcat-taataaaaaggtcgtttga-tcccgactttgcttttatttt 351  Q
    |||||||||||  ||||||||||||||||| ||||||||  ||||||  |||||||| || |||| | ||||||||||  |||||||||    
T  4242 gaaagtgaacttatgtagggctttttgcttcaagaaattaccatcatcaaataaaaatgttgtttcattcccgacttttgttttatttt 4330  T

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