View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0818_low_35 (Length: 409)
Name: NF0818_low_35
Description: NF0818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0818_low_35 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 127 - 393
Target Start/End: Original strand, 961865 - 962133
Alignment:
| Q |
127 |
cttaggaccaagttgtatgatacttgtaacttaactgaccgaaatgaaagaaaacatacttaaaggaacaaaaatgtaatttaactattaatatgaaatg |
226 |
Q |
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| T |
961865 |
cttaggaccaagttgtatgatacttgtaacttaactgaccgaaatgaaagaaaacatacttaaaggaacaaaaatgtaatttaactattaatatgaaacg |
961964 |
T |
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| Q |
227 |
aaagaagtattattaaaccagtcttctaaaatatacttatattatattattatcaaattctgaattatcta----cgtgcatgcatgcattaactttact |
322 |
Q |
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| T |
961965 |
aaagaagtattattaaaccagtcttctaaaatatacttatattatattattatcaaattctgaattatctatgtgcatgcatgcatgcattaactttact |
962064 |
T |
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| Q |
323 |
ctcaatttgcatgcacctggaattagaagcatttatatccttacatttcaaatttcaaatatagtacattc |
393 |
Q |
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| T |
962065 |
ctcaatttgcatgtacctggaattagaaggatt--tatccttacatttcaaatttcaaatatagtacattc |
962133 |
T |
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