View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0819_high_4 (Length: 409)

Name: NF0819_high_4
Description: NF0819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0819_high_4
NF0819_high_4
[»] scaffold0115 (1 HSPs)
scaffold0115 (85-294)||(35070-35271)
[»] chr4 (17 HSPs)
chr4 (168-321)||(18459684-18459837)
chr4 (169-282)||(7044728-7044841)
chr4 (168-321)||(7452420-7452572)
chr4 (168-314)||(610573-610719)
chr4 (168-262)||(23064998-23065092)
chr4 (168-261)||(24719517-24719610)
chr4 (168-323)||(4156763-4156917)
chr4 (168-240)||(5362020-5362092)
chr4 (282-325)||(27527782-27527825)
chr4 (168-240)||(8011273-8011345)
chr4 (167-267)||(9770111-9770211)
chr4 (163-233)||(9911475-9911546)
chr4 (172-240)||(6347121-6347189)
chr4 (172-200)||(7815561-7815589)
chr4 (227-323)||(10394569-10394665)
chr4 (168-240)||(13551679-13551751)
chr4 (168-200)||(37240262-37240294)
[»] scaffold0048 (2 HSPs)
scaffold0048 (168-320)||(48766-48917)
scaffold0048 (257-320)||(61360-61423)
[»] scaffold0036 (1 HSPs)
scaffold0036 (168-321)||(37142-37295)
[»] chr6 (14 HSPs)
chr6 (168-240)||(5422805-5422877)
chr6 (166-236)||(17250055-17250125)
chr6 (168-253)||(18491081-18491166)
chr6 (168-240)||(6943517-6943589)
chr6 (168-240)||(17543797-17543869)
chr6 (207-321)||(18490861-18490975)
chr6 (215-323)||(4841893-4842001)
chr6 (168-267)||(15528140-15528239)
chr6 (167-236)||(7918442-7918511)
chr6 (168-240)||(23897811-23897883)
chr6 (168-240)||(30912469-30912541)
chr6 (272-320)||(5422725-5422773)
chr6 (168-200)||(7223519-7223551)
chr6 (172-240)||(10509080-10509148)
[»] chr1 (12 HSPs)
chr1 (168-267)||(25146798-25146897)
chr1 (168-294)||(18337525-18337650)
chr1 (166-240)||(30619073-30619147)
chr1 (167-240)||(9128897-9128970)
chr1 (168-240)||(21846325-21846397)
chr1 (166-240)||(12800638-12800712)
chr1 (168-262)||(23528656-23528750)
chr1 (285-322)||(12003146-12003183)
chr1 (168-200)||(9327312-9327344)
chr1 (168-200)||(9352160-9352192)
chr1 (168-236)||(9955096-9955164)
chr1 (168-200)||(34478867-34478899)
[»] chr7 (18 HSPs)
chr7 (168-293)||(26565632-26565757)
chr7 (168-263)||(26281343-26281438)
chr7 (169-235)||(5058530-5058596)
chr7 (286-324)||(23618602-23618640)
chr7 (172-253)||(4574475-4574556)
chr7 (168-232)||(4247356-4247420)
chr7 (168-240)||(14055251-14055323)
chr7 (168-240)||(14365279-14365351)
chr7 (166-238)||(21846485-21846556)
chr7 (168-240)||(27221418-27221490)
chr7 (285-324)||(8254292-8254331)
chr7 (177-240)||(11324988-11325051)
chr7 (168-323)||(21157748-21157903)
chr7 (167-226)||(44944920-44944979)
chr7 (168-262)||(22687699-22687793)
chr7 (168-200)||(5715290-5715322)
chr7 (168-240)||(9685301-9685373)
chr7 (168-240)||(24725534-24725606)
[»] chr8 (7 HSPs)
chr8 (168-240)||(11879600-11879672)
chr8 (168-240)||(11897016-11897088)
chr8 (170-240)||(15294672-15294742)
chr8 (170-240)||(15475041-15475111)
chr8 (167-262)||(17646992-17647087)
chr8 (168-236)||(5922049-5922117)
chr8 (168-293)||(15761445-15761568)
[»] chr5 (9 HSPs)
chr5 (169-272)||(18843716-18843819)
chr5 (168-235)||(20923718-20923785)
chr5 (167-262)||(43234867-43234962)
chr5 (168-240)||(21059212-21059284)
chr5 (285-323)||(4289918-4289956)
chr5 (170-240)||(19042446-19042516)
chr5 (168-234)||(22645782-22645848)
chr5 (168-200)||(18051627-18051659)
chr5 (170-234)||(20320926-20320990)
[»] chr3 (11 HSPs)
chr3 (168-240)||(29067284-29067356)
chr3 (288-323)||(15806491-15806526)
chr3 (285-323)||(3041197-3041235)
chr3 (175-240)||(21963436-21963501)
chr3 (175-240)||(21985872-21985937)
chr3 (169-294)||(28135723-28135848)
chr3 (168-245)||(28745770-28745847)
chr3 (285-324)||(18013921-18013960)
chr3 (285-323)||(22970725-22970763)
chr3 (168-253)||(15806550-15806634)
chr3 (169-233)||(3449355-3449419)
[»] chr2 (8 HSPs)
chr2 (170-236)||(25539287-25539353)
chr2 (168-262)||(31238012-31238106)
chr2 (168-240)||(17995055-17995127)
chr2 (168-236)||(23863382-23863450)
chr2 (168-259)||(1404783-1404874)
chr2 (215-262)||(31023270-31023317)
chr2 (286-323)||(19257502-19257539)
chr2 (288-324)||(31023332-31023368)
[»] scaffold0182 (1 HSPs)
scaffold0182 (285-322)||(24299-24336)
[»] scaffold0510 (1 HSPs)
scaffold0510 (168-240)||(158-230)
[»] scaffold0079 (1 HSPs)
scaffold0079 (285-323)||(15030-15068)
[»] scaffold0042 (1 HSPs)
scaffold0042 (168-213)||(93788-93833)
[»] scaffold0017 (1 HSPs)
scaffold0017 (285-322)||(128945-128982)
[»] scaffold0186 (1 HSPs)
scaffold0186 (168-236)||(8443-8511)


Alignment Details
Target: scaffold0115 (Bit Score: 121; Significance: 7e-62; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 85 - 294
Target Start/End: Complemental strand, 35271 - 35070
Alignment:
Q  85 agatatatacaagaggaatagttgcaagctagttagaacaccaatggtgtgtagattgaagttatcaatgtgtgacgaagcatattgttgttaaaatccc 184  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||| |    
T  35271 agatatatacaagaggtatagttgcaagctagttagaacaccaatggtgtgttgattgaagttatcaaagtgtgacgaagcatattgttgtcaaaatctc 35172  T
Q  185 gacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaataaacaagattctaggaaaaccgc 284  Q
    ||||||||| |||||| ||| ||||||| |||||||||||| || ||||||||||| ||||||        || ||||| ||||||||||||||||||||    
T  35171 gacttaaattctaaaattcataattttggaactttattcacctttaacgactcaaattcattg--------tagaataagcaagattctaggaaaaccgc 35080  T
Q  285 atcaaaatcg 294  Q
    ||||| ||||    
T  35079 atcaacatcg 35070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 168 - 321
Target Start/End: Complemental strand, 18459837 - 18459684
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaataaacaa 267  Q
    |||||||| |||||||||||| |||||||||||  ||| ||||||  ||| ||||||||||||||||||||||  ||| ||||||| ||||||||  |||    
T  18459837 attgttgtaaaaatcccgactaaaatcctaaaatccaagattttgcgactgtattcactttcaacgactcaaatccatagcagaatcctaaaataggcaa 18459738  T
Q  268 gattctaggaaaaccgcatcaaaatcgcacaaaatcgtgaaatccatacaaaat 321  Q
     || |||| ||||   ||||||||||||||||||||||||||| ||||||||||    
T  18459737 aatcctagtaaaagtccatcaaaatcgcacaaaatcgtgaaattcatacaaaat 18459684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 282
Target Start/End: Original strand, 7044728 - 7044841
Alignment:
Q  169 ttgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaataaacaag 268  Q
    ||||||| ||||||||||||||||||||||||  ||  |||||| |||||||||||| ||||||||||||||  ||| ||||||| | ||||||| |||     
T  7044728 ttgttgtcaaaatcccgacttaaatcctaaaatccatgattttgcaactttattcaccttcaacgactcaaatccatagcagaatcccaaaataagcaaa 7044827  T
Q  269 attctaggaaaacc 282  Q
    || |||| ||||||    
T  7044828 atcctagtaaaacc 7044841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 168 - 321
Target Start/End: Original strand, 7452420 - 7452572
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaataaacaa 267  Q
    |||||||| ||||||||||||||||| ||||||  || ||||||| |||||||||||| ||||||||||| ||  ||| |  || | |||| |||  |||    
T  7452420 attgttgtgaaaatcccgacttaaattctaaaatccagaattttgcaactttattcaccttcaacgactc-aatccatagtggattcctaatataggcaa 7452518  T
Q  268 gattctaggaaaaccgcatcaaaatcgcacaaaatcgtgaaatccatacaaaat 321  Q
     || |||  |||| ||| || |||||||||||||||||||||| ||||||||||    
T  7452519 aatcctaataaaatcgcttctaaatcgcacaaaatcgtgaaatacatacaaaat 7452572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 314
Target Start/End: Complemental strand, 610719 - 610573
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaataaacaa 267  Q
    |||||||| |||||||| |||||||| |||||| |||  | | ||  |||||| ||  ||||||||| | ||| | ||||||||||  ||||| | ||||    
T  610719 attgttgtcaaaatcccaacttaaatactaaaattcatgactatgcgactttactcgttttcaacgattgaaatttattgcagaattttaaaacagacaa 610620  T
Q  268 gattctaggaaaaccgcatcaaaatcgcacaaaatcgtgaaatccat 314  Q
     || |||   |||||||||||||||||||||||||||||||||||||    
T  610619 aatcctaatgaaaccgcatcaaaatcgcacaaaatcgtgaaatccat 610573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 262
Target Start/End: Complemental strand, 23065092 - 23064998
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaata 262  Q
    ||||||||||||| |||||||||||| ||||||  ||  |||||| |||||| ||||| ||||||||||||||  ||||| ||||| ||||||||    
T  23065092 attgttgttaaaaccccgacttaaattctaaaatccagtattttgtaactttcttcacattcaacgactcaaatccattgtagaattctaaaata 23064998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 168 - 261
Target Start/End: Original strand, 24719517 - 24719610
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaat 261  Q
    |||||||| |||||| |||||||| | |||||| |||| ||||||  ||||||||||| ||||||||||||||  ||| ||||||| |||||||    
T  24719517 attgttgtcaaaatctcgacttaatttctaaaattcaagattttgcgactttattcaccttcaacgactcaaatccatagcagaatcctaaaat 24719610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 323
Target Start/End: Original strand, 4156763 - 4156917
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaataaacaa 267  Q
    |||||||| |||||||||||||||||| ||||| | |  |||||   ||||||||||| || |||||||||||    | | ||||| ||||||||| |||    
T  4156763 attgttgtcaaaatcccgacttaaatcttaaaatttaggattttatgactttattcacctttaacgactcaaatctgtagtagaatcctaaaataagcaa 4156862  T
Q  268 gattctaggaaaaccgcatcaaaatcgcacaaaatcgtgaaatccatacaaaatcg 323  Q
     ||  ||| |||| |||||||||||| ||| |||| ||||||| ||||||||||||    
T  4156863 aatcttagtaaaatcgcatcaaaatcacac-aaattgtgaaatacatacaaaatcg 4156917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 5362092 - 5362020
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||| |||||||||||||||||||||||| |||  ||||||  ||||| ||||  ||||||||||||||    
T  5362092 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcatcttcaacgactcaaa 5362020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 325
Target Start/End: Original strand, 27527782 - 27527825
Alignment:
Q  282 cgcatcaaaatcgcacaaaatcgtgaaatccatacaaaatcgtg 325  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||    
T  27527782 cgcatcaaaatcgcataaaatcgtgaaatccctacaaaatcgtg 27527825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 8011345 - 8011273
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||| |||||||| ||| ||||||||||| |||  ||||||  ||||| ||||| ||||||||||||||    
T  8011345 attgttgtcaaaatcccaactcaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaa 8011273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 267
Target Start/End: Original strand, 9770111 - 9770211
Alignment:
Q  167 tattgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaataaaca 266  Q
    |||||||||||||||| |||||||||| ||||||   |  ||||||  ||||| ||||| ||||||||||||||  ||| | ||||| |||||||| |||    
T  9770111 tattgttgttaaaatctcgacttaaattctaaaatctaggattttgtgacttttttcaccttcaacgactcaaatccatagtagaatcctaaaatagaca 9770210  T
Q  267 a 267  Q
    |    
T  9770211 a 9770211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 9911546 - 9911475
Alignment:
Q  163 agcatattgttgttaaaatcccgacttaaa-tcctaaaaatcaaaattttgaaactttattcactttcaacg 233  Q
    |||||||||||||  ||||||||| ||||| |||||||| |||| |||||| |||||| ||||| |||||||    
T  9911546 agcatattgttgtctaaatcccgatttaaaatcctaaaattcaagattttgcaactttcttcaccttcaacg 9911475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 6347189 - 6347121
Alignment:
Q  172 ttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||| ||||| || |||||||||||||||  ||  |||||| ||||||||| || ||||||||||||||    
T  6347189 ttgtcaaaattccaacttaaatcctaaaatccaggattttgcaactttatttaccttcaacgactcaaa 6347121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 200
Target Start/End: Original strand, 7815561 - 7815589
Alignment:
Q  172 ttgttaaaatcccgacttaaatcctaaaa 200  Q
    |||||||||||||||||||||||||||||    
T  7815561 ttgttaaaatcccgacttaaatcctaaaa 7815589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 10394569 - 10394665
Alignment:
Q  227 ttcaacgactcaaaatcattgcagaatactaaaataaacaagattctaggaaaaccgcatcaaaatcgcacaaaatcgtgaaatccatacaaaatcg 323  Q
    |||||||||| ||| |||| | |||||  |||||||  |||||| || | ||||  |||| |||||||||||||||| | |||||||| ||||||||    
T  10394569 ttcaacgacttaaattcatagtagaattttaaaataggcaagatccttgtaaaattgcattaaaatcgcacaaaatcattaaatccattcaaaatcg 10394665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 13551751 - 13551679
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||| |||||| ||||||| ||||||||| | |  ||||||  ||||| ||||| ||||||||||||||    
T  13551751 attgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaa 13551679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 200
Target Start/End: Original strand, 37240262 - 37240294
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaa 200  Q
    ||||||||||||||||| |||||||||||||||    
T  37240262 attgttgttaaaatccctacttaaatcctaaaa 37240294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 168 - 320
Target Start/End: Complemental strand, 48917 - 48766
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaataaacaa 267  Q
    |||||||| ||||| ||||||||||||||||||   | ||||||| |||||||||||| ||||||||||||||  |||   ||||| | |||| || |||    
T  48917 attgttgtgaaaattccgacttaaatcctaaaatctagaattttgcaactttattcaccttcaacgactcaaatccatatgagaatcccaaaa-aagcaa 48819  T
Q  268 gattctaggaaaaccgcatcaaaatcgcacaaaatcgtgaaatccatacaaaa 320  Q
     ||| ||| |||| |||||||||||||||||||| |||||||| |||||||||    
T  48818 aattatagtaaaatcgcatcaaaatcgcacaaaaacgtgaaattcatacaaaa 48766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 61423 - 61360
Alignment:
Q  257 aaaataaacaagattctaggaaaaccgcatcaaaatcgcacaaaatcgtgaaatccatacaaaa 320  Q
    ||||||| ||| ||| ||| ||||  ||||||||||||||||||| |||||||| |||||||||    
T  61423 aaaataagcaaaattatagtaaaattgcatcaaaatcgcacaaaaacgtgaaattcatacaaaa 61360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 168 - 321
Target Start/End: Complemental strand, 37295 - 37142
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaataaacaa 267  Q
    |||||||| ||||| |||||||||||  ||||| ||| ||||||| || ||||||||| |||||| |||||||  ||| |||||||  |||||||   ||    
T  37295 attgttgtcaaaatgccgacttaaattttaaaattcagaattttgcaattttattcaccttcaacaactcaaatccatagcagaatcttaaaataggtaa 37196  T
Q  268 gattctaggaaaaccgcatcaaaatcgcacaaaatcgtgaaatccatacaaaat 321  Q
     || |||| |||| |||||||||||| ||||||||||||||||| || ||||||    
T  37195 aatcctagtaaaatcgcatcaaaatcacacaaaatcgtgaaatctatgcaaaat 37142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 5422877 - 5422805
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||| ||||||||||||||||| |||||| |||  |||||| |||||||||||| ||||||||||||||    
T  5422877 attgttgtcaaaatcccgacttaaatactaaaattcatgattttgcaactttattcaccttcaacgactcaaa 5422805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 17250055 - 17250125
Alignment:
Q  166 atattgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgact 236  Q
    |||||||||||||||||||||||||||||||||||  ||  |||||| |||||| ||||| ||||||||||    
T  17250055 atattgttgttaaaatcccgacttaaatcctaaaatccaggattttgcaactttcttcaccttcaacgact 17250125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 168 - 253
Target Start/End: Complemental strand, 18491166 - 18491081
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaat 253  Q
    |||| ||| ||||||||||||||||||||||||  || ||||||| | |||||||||| ||||||||||||||  ||| |||||||    
T  18491166 attgctgtcaaaatcccgacttaaatcctaaaatccagaattttgcatctttattcaccttcaacgactcaaatccatagcagaat 18491081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 6943589 - 6943517
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||| |||||||||||||||||||||||| |||  ||||||  ||||| ||||| ||||||||||||||    
T  6943589 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaa 6943517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 17543869 - 17543797
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||| |||||| ||||||||||||||||| |||  ||||||  ||||| ||||||||||||||||||||    
T  17543869 attgttgtcaaaatctcgacttaaatcctaaaattcaggattttgcgacttttttcactttcaacgactcaaa 17543797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 18490975 - 18490861
Alignment:
Q  207 attttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaataaacaagattctaggaaaaccgcatcaaaatcgcacaaaatcgtg 306  Q
    |||||| |||||||||||| |||||||||| |||  ||| ||| ||| | ||||   |||| || |||| ||||  || |||||||| ||||||||||||    
T  18490975 attttgcaactttattcaccttcaacgactgaaacccatagcataatcccaaaaatgacaaaatcctagtaaaattgcttcaaaatcacacaaaatcgtg 18490876  T
Q  307 aaatccatacaaaat 321  Q
    |||||||||||||||    
T  18490875 aaatccatacaaaat 18490861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 323
Target Start/End: Complemental strand, 4842001 - 4841893
Alignment:
Q  215 actttattcactttcaacgactcaaaatcattgcagaatactaaaataaacaagattctaggaaaaccgcatcaaaatcgcacaaaatcgtgaaatccat 314  Q
    ||||||||||| ||||||||||||||  | | ||||||| | | ||||  ||| || |||| |||| ||| |||||||||||||||||||||| || |||    
T  4842001 actttattcaccttcaacgactcaaatccgtagcagaatcccataataggcaaaatactagtaaaatcgcttcaaaatcgcacaaaatcgtgagattcat 4841902  T
Q  315 acaaaatcg 323  Q
    |||| ||||    
T  4841901 acaagatcg 4841893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 15528239 - 15528140
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaataaacaa 267  Q
    |||||||| |||||||||||||||||||||||| |||  ||||||  ||||| ||||| || ||||||| ||| |||| | |||||  ||||||| ||||    
T  15528239 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcacctttaacgacttaaattcatagtagaatcttaaaatagacaa 15528140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 7918511 - 7918442
Alignment:
Q  167 tattgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgact 236  Q
    ||||||||| ||||||||||||||||| |||||| |||  ||||||  ||||| ||||| ||||||||||    
T  7918511 tattgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttttttcaccttcaacgact 7918442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 23897811 - 23897883
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    ||||||| ||| |||||||||||||||||||||  ||  ||||||  ||||| ||||| ||||||||||||||    
T  23897811 attgttgataagatcccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaa 23897883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 30912541 - 30912469
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||| |||||||| ||||||||||||||| | |  ||||||  ||||| ||||| ||||||||||||||    
T  30912541 attgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaa 30912469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 320
Target Start/End: Complemental strand, 5422773 - 5422725
Alignment:
Q  272 ctaggaaaaccgcatcaaaatcgcacaaaatcgtgaaatccatacaaaa 320  Q
    |||| |||| ||||||||||||||||||||| ||| ||| |||||||||    
T  5422773 ctagtaaaatcgcatcaaaatcgcacaaaattgtggaattcatacaaaa 5422725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 200
Target Start/End: Original strand, 7223519 - 7223551
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaa 200  Q
    |||||||| ||||||||||||||||||||||||    
T  7223519 attgttgtcaaaatcccgacttaaatcctaaaa 7223551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 10509148 - 10509080
Alignment:
Q  172 ttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||| ||||||| |||||||||||||||| ||| || ||||  ||||| ||||| ||||| ||||||||    
T  10509148 ttgtcaaaatccagacttaaatcctaaaattcagaaatttgtgactttcttcacattcaatgactcaaa 10509080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 6e-16; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 25146897 - 25146798
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaataaacaa 267  Q
    |||||||| ||||||| |||||||||||||||| ||| |||||||  ||||| ||||| |||||||||||||| |||| | ||||| | |||||| ||||    
T  25146897 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaatagacaa 25146798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 18337650 - 18337525
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaataaacaa 267  Q
    |||||||| |||||||||||||| | |||||||  ||  |||||| |||||||||||| ||||||||||||||  ||| ||||||  | ||||||  |||    
T  18337650 attgttgtcaaaatcccgacttata-cctaaaatccaggattttgcaactttattcaccttcaacgactcaaatccatagcagaaccccaaaataggcaa 18337552  T
Q  268 gattctaggaaaaccgcatcaaaatcg 294  Q
     || |||| |||| |||||||||||||    
T  18337551 aatcctagtaaaatcgcatcaaaatcg 18337525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 30619073 - 30619147
Alignment:
Q  166 atattgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||||| ||||||||||||||||||||||||  ||  ||||||  | ||| ||||| ||||||||||||||    
T  30619073 atattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgcgattttcttcaccttcaacgactcaaa 30619147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 9128970 - 9128897
Alignment:
Q  167 tattgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||||||||||| ||||||||||||||||||| |  || |||  ||||| ||||| || |||||||||||    
T  9128970 tattgttgttaaaatcacgacttaaatcctaaaaattaggatcttgcgactttcttcacatttaacgactcaaa 9128897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 21846397 - 21846325
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||| |||||||||| |||||||||||||  ||  ||||||  ||||| ||||| ||||||||||||||    
T  21846397 attgttgtcaaaatcccgagttaaatcctaaaatccaggattttgcgacttttttcaccttcaacgactcaaa 21846325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 12800712 - 12800638
Alignment:
Q  166 atattgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||||| |||||||| ||||||||||||||| | |  |||||   ||||| ||||| ||||||||||||||    
T  12800712 atattgttgtgaaaatcccaacttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaa 12800638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 262
Target Start/End: Original strand, 23528656 - 23528750
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaata 262  Q
    |||||||| |||||||| ||||||||| ||||| |||  ||||||  ||||| ||||  ||||||||||||||  ||| | ||||| ||||||||    
T  23528656 attgttgtcaaaatcccaacttaaatcttaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaatcctaaaata 23528750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Complemental strand, 12003183 - 12003146
Alignment:
Q  285 atcaaaatcgcacaaaatcgtgaaatccatacaaaatc 322  Q
    |||||||||||||||||||||||||||| | |||||||    
T  12003183 atcaaaatcgcacaaaatcgtgaaatccgttcaaaatc 12003146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 9327344 - 9327312
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaa 200  Q
    |||||||||||||||| ||||||||||||||||    
T  9327344 attgttgttaaaatcctgacttaaatcctaaaa 9327312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 9352192 - 9352160
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaa 200  Q
    |||||||| ||||||||||||||||||||||||    
T  9352192 attgttgtcaaaatcccgacttaaatcctaaaa 9352160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 9955164 - 9955096
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgact 236  Q
    |||||||| |||||||| ||||||||||||||| | |  ||||||  ||||| ||||| ||||||||||    
T  9955164 attgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgact 9955096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 34478899 - 34478867
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaa 200  Q
    ||||||||||||||||||||||||||| |||||    
T  34478899 attgttgttaaaatcccgacttaaatcttaaaa 34478867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 168 - 293
Target Start/End: Complemental strand, 26565757 - 26565632
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaataaacaa 267  Q
    |||||||| ||||| | | |||||||| ||||| ||| ||||||| ||||||||||||||| ||||| ||||| |||| |||||||   ||||||  |||    
T  26565757 attgttgtcaaaattctgccttaaatcataaaattcagaattttgtaactttattcacttttaacgattcaaattcatagcagaatctcaaaatatgcaa 26565658  T
Q  268 gattctaggaaaaccgcatcaaaatc 293  Q
    ||| |||  |||| ||||||||||||    
T  26565657 gatcctactaaaatcgcatcaaaatc 26565632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 263
Target Start/End: Complemental strand, 26281438 - 26281343
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaataa 263  Q
    |||||||| ||||| |||||||||||| ||||| |||  ||||||  ||||| ||||| ||||||||||||||  ||||| ||||| | |||||||    
T  26281438 attgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaattccaaaataa 26281343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 5058530 - 5058596
Alignment:
Q  169 ttgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgac 235  Q
    ||||||| |||||||||||||||||||||||| ||| |||||||  | ||| ||||| |||||||||    
T  5058530 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgattttcttcaccttcaacgac 5058596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 324
Target Start/End: Complemental strand, 23618640 - 23618602
Alignment:
Q  286 tcaaaatcgcacaaaatcgtgaaatccatacaaaatcgt 324  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  23618640 tcaaaatcgcacaaaatcgtgaaatccattcaaaatcgt 23618602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 253
Target Start/End: Original strand, 4574475 - 4574556
Alignment:
Q  172 ttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaat 253  Q
    |||| ||||||  ||||||||||||||||  || |||||||  |||||| |||| |||||||| ||||| ||||||||||||    
T  4574475 ttgtgaaaatcatgacttaaatcctaaaatccagaattttgcgactttactcaccttcaacgattcaaattcattgcagaat 4574556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 4247356 - 4247420
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaac 232  Q
    |||||||| |||||||| | ||||||||||||| |||  |||||| |||||| ||||||||||||    
T  4247356 attgttgtcaaaatcccaatttaaatcctaaaattcaggattttgtaactttcttcactttcaac 4247420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 14055251 - 14055323
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||| |||||||| ||||| |||||||||  ||| ||||||  ||||| ||||| ||||||||||||||    
T  14055251 attgttgtgaaaatccccacttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaa 14055323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 14365279 - 14365351
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||| |||||||| ||||| |||||||||  ||| ||||||  ||||| ||||| ||||||||||||||    
T  14365279 attgttgtgaaaatccccacttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaa 14365351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 21846556 - 21846485
Alignment:
Q  166 atattgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactca 238  Q
    |||||||||| ||||||||||||||||| |||||| |||  ||||||  ||||| ||||| ||||||||||||    
T  21846556 atattgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttt-ttcacattcaacgactca 21846485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 27221418 - 27221490
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    ||||||||||||||||| |||||||| |||||| |||  ||||||  ||||| ||||  ||||||||||||||    
T  27221418 attgttgttaaaatcccaacttaaattctaaaattcaggattttgcgactttcttcatcttcaacgactcaaa 27221490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 8254331 - 8254292
Alignment:
Q  285 atcaaaatcgcacaaaatcgtgaaatccatacaaaatcgt 324  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  8254331 atcaaaatcacacaaaatcgtgaaatccattcaaaatcgt 8254292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 11324988 - 11325051
Alignment:
Q  177 aaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||||||||||||||||||| |||  ||||||  | ||| ||||| ||||||||||||||    
T  11324988 aaaatcccgacttaaatcctaaaattcatgattttgggattttcttcaccttcaacgactcaaa 11325051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 168 - 323
Target Start/End: Complemental strand, 21157903 - 21157748
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaataaacaa 267  Q
    ||||||||  |||| | |||||||||| ||||| |||   |||||  |||||| |||||| ||||||||||||  ||| ||| ||| |||||| ||  ||    
T  21157903 attgttgtcgaaattctgacttaaatcttaaaattcagggttttgcgactttactcacttacaacgactcaaatccatagcaaaatcctaaaacaagaaa 21157804  T
Q  268 gattctaggaaaaccgcatcaaaatcgcacaaaatcgtgaaatccatacaaaatcg 323  Q
     ||  ||| |||| ||| | ||||| |||||||| |||||||| ||||||||||||    
T  21157803 aatcgtagtaaaatcgcttaaaaattgcacaaaaccgtgaaattcatacaaaatcg 21157748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 44944979 - 44944920
Alignment:
Q  167 tattgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcact 226  Q
    ||||||||| |||||||||||||||||||||||| |||  ||||||  ||||| ||||||    
T  44944979 tattgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcact 44944920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 262
Target Start/End: Complemental strand, 22687793 - 22687699
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaata 262  Q
    |||||||| |||||||||||||||||||||||| |||  | ||||  ||||| ||||  |||||| |||||||  ||| ||||||| | ||||||    
T  22687793 attgttgtcaaaatcccgacttaaatcctaaaattcaggaatttgcgactttcttcaacttcaacaactcaaatccatcgcagaatcccaaaata 22687699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 200
Target Start/End: Original strand, 5715290 - 5715322
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaa 200  Q
    |||||||| ||||||||||||||||||||||||    
T  5715290 attgttgtcaaaatcccgacttaaatcctaaaa 5715322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 9685373 - 9685301
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||| |||||| ||||||| ||||||||| | |  ||||||  ||||| ||||| ||||||||||||||    
T  9685373 attgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaa 9685301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 24725606 - 24725534
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||| ||||||| ||||||||||||||||  ||| |||||   ||||| ||||| |||||| |||||||    
T  24725606 attgttgtcaaaatccagacttaaatcctaaaatccaagattttacgactttcttcaccttcaacaactcaaa 24725534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 11879600 - 11879672
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||| ||||| | |||||||||||||||| |||  |||||| |||||| ||||||||||||||||||||    
T  11879600 attgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaa 11879672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 11897016 - 11897088
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||| ||||| | |||||||||||||||| |||  |||||| |||||| ||||||||||||||||||||    
T  11897016 attgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaa 11897088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 15294672 - 15294742
Alignment:
Q  170 tgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||| |||||||||||||||||||||||| |||  ||||||  ||||| ||||| ||||||||||||||    
T  15294672 tgttgtaaaaatcccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaa 15294742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 15475041 - 15475111
Alignment:
Q  170 tgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||| |||||||||||||||||||||||| |||  ||||||  ||||| ||||| ||||||||||||||    
T  15475041 tgttgtaaaaatcccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaa 15475111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 262
Target Start/End: Original strand, 17646992 - 17647087
Alignment:
Q  167 tattgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaata 262  Q
    ||||||||| ||||| |||||||||||| ||||| |||  ||||||  ||||| ||||| |||||||||||||| |||| | ||||| | ||||||    
T  17646992 tattgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaata 17647087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 5922049 - 5922117
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgact 236  Q
    |||||||| ||||||||||||||||||||||||  ||  ||||||  ||||| ||||| ||||||||||    
T  5922049 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgact 5922117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 293
Target Start/End: Complemental strand, 15761568 - 15761445
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaataaacaa 267  Q
    |||||||| |||||| ||||||||||||||||   ||  ||||||  | |||||| || |||||||||||||| |||| ||| ||| | ||||||  |||    
T  15761568 attgttgtcaaaatctcgacttaaatcctaaactccaggattttgtgagtttatttaccttcaacgactcaaattcatagcaaaatcccaaaataggcaa 15761469  T
Q  268 gattctaggaaaaccgcatcaaaatc 293  Q
     ||||||| ||||  |||||||||||    
T  15761468 aattctagtaaaa--gcatcaaaatc 15761445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 169 - 272
Target Start/End: Original strand, 18843716 - 18843819
Alignment:
Q  169 ttgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaataaacaag 268  Q
    ||||||||||||| ||||||||||||||| || |||  ||||||  ||||| ||||| ||||||||||||||  ||||| ||||| | |||||| ||||     
T  18843716 ttgttgttaaaattccgacttaaatcctataattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaatcccaaaatagacaaa 18843815  T
Q  269 attc 272  Q
    ||||    
T  18843816 attc 18843819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 20923718 - 20923785
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgac 235  Q
    |||||||| ||||||||||||||||||||||||  || |||||||  ||||| ||||| |||||||||    
T  20923718 attgttgtcaaaatcccgacttaaatcctaaaatccagaattttgcgactttcttcaccttcaacgac 20923785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 262
Target Start/End: Original strand, 43234867 - 43234962
Alignment:
Q  167 tattgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaata 262  Q
    ||||||||| |||||||| ||||||||||||||| |||  ||||||  ||||| ||||| |||||||||| |||  ||| | ||||| ||||||||    
T  43234867 tattgttgtcaaaatcccaacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcctaaaata 43234962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 21059284 - 21059212
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||| |||||||||| |||||||||||||   |  ||||||  ||||| ||||||||||||||||||||    
T  21059284 attgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcactttcaacgactcaaa 21059212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 4289918 - 4289956
Alignment:
Q  285 atcaaaatcgcacaaaatcgtgaaatccatacaaaatcg 323  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  4289918 atcaaaatcgcacaaaatcgtgaaatccgttcaaaatcg 4289956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 19042516 - 19042446
Alignment:
Q  170 tgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||| |||||||| |||||||| |||||| | || ||||||  ||||| ||||| ||||||||||||||    
T  19042516 tgttgtcaaaatcccaacttaaattctaaaatttaagattttgtgactttcttcaccttcaacgactcaaa 19042446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 234
Target Start/End: Complemental strand, 22645848 - 22645782
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacga 234  Q
    |||||||| ||||||||||||||||||||||||  ||  ||||||  ||||| ||||| ||||||||    
T  22645848 attgttgtcaaaatcccgacttaaatcctaaaatccagtattttgcgactttcttcaccttcaacga 22645782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 18051659 - 18051627
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaa 200  Q
    |||||||| ||||||||||||||||||||||||    
T  18051659 attgttgtcaaaatcccgacttaaatcctaaaa 18051627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 20320926 - 20320990
Alignment:
Q  170 tgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacga 234  Q
    |||||| |||||||| || |||||||||||| | || |||||| |||||| ||||| ||||||||    
T  20320926 tgttgtcaaaatcccaacctaaatcctaaaatttaagattttgcaactttcttcaccttcaacga 20320990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000009; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 29067284 - 29067356
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||| ||||||||||||||||| |||||| |||  ||||||  ||||| ||||| ||||||||||||||    
T  29067284 attgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgactttcttcaccttcaacgactcaaa 29067356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 323
Target Start/End: Complemental strand, 15806526 - 15806491
Alignment:
Q  288 aaaatcgcacaaaatcgtgaaatccatacaaaatcg 323  Q
    ||||||||||||||||||||||||||||||||||||    
T  15806526 aaaatcgcacaaaatcgtgaaatccatacaaaatcg 15806491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 3041197 - 3041235
Alignment:
Q  285 atcaaaatcgcacaaaatcgtgaaatccatacaaaatcg 323  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  3041197 atcaaaatcgcacaaaatcgtgaaatccattcaaaatcg 3041235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 21963436 - 21963501
Alignment:
Q  175 ttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||||||||||||||||||||| |||| |||||   ||||| ||||| || |||||||||||    
T  21963436 ttaaaatcccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaa 21963501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 21985872 - 21985937
Alignment:
Q  175 ttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||||||||||||||||||||| |||| |||||   ||||| ||||| || |||||||||||    
T  21985872 ttaaaatcccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaa 21985937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 28135723 - 28135848
Alignment:
Q  169 ttgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaataaacaag 268  Q
    ||||||| ||||| |||| ||||||| ||||| |||  ||||||  ||||||||||||||||  ||||||||  ||| ||| ||| || |||||  |||     
T  28135723 ttgttgtcaaaattccgatttaaatcgtaaaattcaggattttgcgactttattcactttcagtgactcaaatccatagcaaaattctcaaataggcaaa 28135822  T
Q  269 attctaggaaaaccgcatcaaaatcg 294  Q
    ||||||| |||| | |||||||||||    
T  28135823 attctagtaaaatcacatcaaaatcg 28135848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 168 - 245
Target Start/End: Original strand, 28745770 - 28745847
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcat 245  Q
    |||||||| |||||||||| ||||||||||||| | |  ||||||  ||||| ||||| |||||||||||||| ||||    
T  28745770 attgttgtcaaaatcccgatttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaattcat 28745847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 18013921 - 18013960
Alignment:
Q  285 atcaaaatcgcacaaaatcgtgaaatccatacaaaatcgt 324  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  18013921 atcaaaatcgcacaaaatcgtgaaatccatttaaaatcgt 18013960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 22970725 - 22970763
Alignment:
Q  285 atcaaaatcgcacaaaatcgtgaaatccatacaaaatcg 323  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  22970725 atcaaaatcgcacaaaatcatgaaatccattcaaaatcg 22970763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 253
Target Start/End: Complemental strand, 15806634 - 15806550
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaat 253  Q
    |||||||| ||||||| ||||||||||||| ||  || |||||||  ||||||||||| ||||| ||||||||  ||| |||||||    
T  15806634 attgttgtcaaaatcc-gacttaaatcctacaatccagaattttgcgactttattcaccttcaatgactcaaatccatagcagaat 15806550  T

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Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 3449419 - 3449355
Alignment:
Q  169 ttgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacg 233  Q
    ||||||| |||||||||||||||||||||||| |||  ||||||  ||||| || || |||||||    
T  3449419 ttgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttctttaccttcaacg 3449355  T

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Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 25539353 - 25539287
Alignment:
Q  170 tgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgact 236  Q
    ||||||||||||||||| ||||||||||||| |||| | |||| || ||| ||||| ||||||||||    
T  25539353 tgttgttaaaatcccgatttaaatcctaaaattcaagaatttgcaattttcttcaccttcaacgact 25539287  T

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Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 262
Target Start/End: Complemental strand, 31238106 - 31238012
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaaata 262  Q
    |||||||| ||||||||||||||||||||||||   |  ||||||  ||||| ||||| |||||||||||||| |||| | |||||  |||||||    
T  31238106 attgttgtcaaaatcccgacttaaatcctaaaatctaggattttgccactttcttcaccttcaacgactcaaattcatagtagaatcttaaaata 31238012  T

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Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 17995055 - 17995127
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    |||||||||||||| |||||||||| |||||||  || |||||||  | |||||||||  |||||||||||||    
T  17995055 attgttgttaaaattccgacttaaaacctaaaatccagaattttgcgattttattcaccatcaacgactcaaa 17995127  T

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Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 23863450 - 23863382
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgact 236  Q
    |||||||| ||||||||||||||||| ||||||   | |||||||  ||||| ||||||||||||||||    
T  23863450 attgttgtcaaaatcccgacttaaattctaaaatcgagaattttgcgactttcttcactttcaacgact 23863382  T

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Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 168 - 259
Target Start/End: Original strand, 1404783 - 1404874
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaaatcattgcagaatactaaa 259  Q
    |||||||| ||||||||||||||||| |||||| | |  ||||||  ||||| ||||| |||||||||| |||  ||||| ||||| |||||    
T  1404783 attgttgtcaaaatcccgacttaaattctaaaatttaggattttgtgactttcttcaccttcaacgacttaaatccattgtagaatcctaaa 1404874  T

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Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 262
Target Start/End: Original strand, 31023270 - 31023317
Alignment:
Q  215 actttattcactttcaacgactcaaaatcattgcagaatactaaaata 262  Q
    |||||||||||||||||||||||||| |||| | ||||| ||||||||    
T  31023270 actttattcactttcaacgactcaaattcatagtagaatcctaaaata 31023317  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 323
Target Start/End: Complemental strand, 19257539 - 19257502
Alignment:
Q  286 tcaaaatcgcacaaaatcgtgaaatccatacaaaatcg 323  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  19257539 tcaaaatcgcacaaaattgtgaaatccattcaaaatcg 19257502  T

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Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 324
Target Start/End: Original strand, 31023332 - 31023368
Alignment:
Q  288 aaaatcgcacaaaatcgtgaaatccatacaaaatcgt 324  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  31023332 aaaatcgcacaaaatcttgaaatctatacaaaatcgt 31023368  T

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Target: scaffold0182 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 322
Target Start/End: Original strand, 24299 - 24336
Alignment:
Q  285 atcaaaatcgcacaaaatcgtgaaatccatacaaaatc 322  Q
    |||||||||||||||||||||||||||||| |||||||    
T  24299 atcaaaatcgcacaaaatcgtgaaatccattcaaaatc 24336  T

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Target: scaffold0510 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 230 - 158
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgactcaaa 240  Q
    ||||||| ||| |||||||||||||||||||||  ||  ||||||  ||||| ||||| ||||||||||||||    
T  230 attgttgataagatcccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaa 158  T

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Target: scaffold0079 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 15068 - 15030
Alignment:
Q  285 atcaaaatcgcacaaaatcgtgaaatccatacaaaatcg 323  Q
    ||||||||||||||||||||| |||||||| ||||||||    
T  15068 atcaaaatcgcacaaaatcgtaaaatccattcaaaatcg 15030  T

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Target: scaffold0042 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 93833 - 93788
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttga 213  Q
    |||||||| ||||||||||||||||||||||||  || ||||||||    
T  93833 attgttgtcaaaatcccgacttaaatcctaaaatccagaattttga 93788  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Complemental strand, 128982 - 128945
Alignment:
Q  285 atcaaaatcgcacaaaatcgtgaaatccatacaaaatc 322  Q
    |||||||||||||||||||||||||||| | |||||||    
T  128982 atcaaaatcgcacaaaatcgtgaaatccgttcaaaatc 128945  T

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Target: scaffold0186 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 8443 - 8511
Alignment:
Q  168 attgttgttaaaatcccgacttaaatcctaaaaatcaaaattttgaaactttattcactttcaacgact 236  Q
    |||||||| |||||||| |||||||||||||||  ||  ||||||  ||||| ||||| ||||||||||    
T  8443 attgttgtcaaaatccctacttaaatcctaaaatccacgattttgcgactttcttcaccttcaacgact 8511  T

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