View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0819_low_24 (Length: 306)

Name: NF0819_low_24
Description: NF0819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0819_low_24
NF0819_low_24
[»] chr3 (53 HSPs)
chr3 (104-306)||(14648233-14648435)
chr3 (161-264)||(2249221-2249324)
chr3 (161-264)||(45220967-45221070)
chr3 (164-264)||(5841140-5841240)
chr3 (166-221)||(16840344-16840399)
chr3 (165-218)||(11912309-11912362)
chr3 (165-218)||(51608665-51608718)
chr3 (105-156)||(18757206-18757257)
chr3 (212-264)||(41156-41208)
chr3 (104-156)||(8583509-8583561)
chr3 (104-156)||(13969076-13969128)
chr3 (104-156)||(13974551-13974603)
chr3 (104-156)||(14084441-14084493)
chr3 (104-156)||(14089842-14089894)
chr3 (112-156)||(20187584-20187628)
chr3 (104-156)||(49399383-49399435)
chr3 (259-306)||(41249-41296)
chr3 (259-306)||(5841281-5841328)
chr3 (105-156)||(11850905-11850956)
chr3 (104-155)||(24123405-24123456)
chr3 (104-154)||(31690814-31690864)
chr3 (104-154)||(31943351-31943401)
chr3 (104-156)||(10597976-10598028)
chr3 (212-264)||(10834946-10834998)
chr3 (212-264)||(11912449-11912501)
chr3 (212-264)||(12853368-12853420)
chr3 (212-264)||(14670048-14670100)
chr3 (212-264)||(16326046-16326098)
chr3 (212-264)||(16795525-16795577)
chr3 (259-306)||(2249133-2249180)
chr3 (212-263)||(3801992-3802043)
chr3 (212-263)||(14764801-14764852)
chr3 (259-306)||(16325958-16326005)
chr3 (259-306)||(16840120-16840167)
chr3 (212-263)||(18899475-18899526)
chr3 (212-263)||(20249855-20249906)
chr3 (259-306)||(45220879-45220926)
chr3 (212-263)||(54519619-54519670)
chr3 (121-155)||(10597950-10597984)
chr3 (212-262)||(12304196-12304246)
chr3 (212-264)||(4590165-4590217)
chr3 (212-264)||(8491737-8491789)
chr3 (212-264)||(8928872-8928924)
chr3 (212-264)||(13435840-13435892)
chr3 (161-193)||(16840460-16840492)
chr3 (105-156)||(12419275-12419326)
chr3 (212-263)||(29545944-29545995)
chr3 (212-262)||(9532280-9532330)
chr3 (212-264)||(16751906-16751958)
chr3 (212-264)||(16840208-16840260)
chr3 (212-264)||(17318514-17318566)
chr3 (216-264)||(18933360-18933408)
chr3 (216-264)||(30064411-30064459)
[»] scaffold2015 (1 HSPs)
scaffold2015 (104-306)||(402-604)
[»] chr6 (27 HSPs)
chr6 (104-306)||(14594624-14594826)
chr6 (104-306)||(7429341-7429543)
chr6 (161-264)||(9622918-9623020)
chr6 (164-264)||(28707833-28707933)
chr6 (165-218)||(1254037-1254090)
chr6 (104-154)||(23235146-23235196)
chr6 (165-218)||(34297916-34297969)
chr6 (104-156)||(24562192-24562244)
chr6 (259-306)||(23955484-23955531)
chr6 (166-221)||(25737775-25737830)
chr6 (259-306)||(28707974-28708021)
chr6 (212-264)||(23955391-23955443)
chr6 (105-156)||(5290384-5290435)
chr6 (105-156)||(26418909-26418960)
chr6 (212-263)||(27222854-27222905)
chr6 (212-262)||(12941243-12941293)
chr6 (212-264)||(18918585-18918637)
chr6 (216-264)||(23400704-23400752)
chr6 (212-264)||(23538003-23538055)
chr6 (212-264)||(34297777-34297829)
chr6 (259-306)||(9622830-9622877)
chr6 (212-254)||(1254181-1254223)
chr6 (259-305)||(25738007-25738053)
chr6 (212-262)||(28290901-28290951)
chr6 (121-154)||(5290359-5290392)
chr6 (259-304)||(34297691-34297736)
chr6 (212-264)||(2076308-2076360)
[»] chr5 (28 HSPs)
chr5 (104-303)||(43243725-43243924)
chr5 (164-264)||(19075863-19075963)
chr5 (161-264)||(31253215-31253318)
chr5 (104-154)||(27636094-27636144)
chr5 (105-154)||(24669209-24669258)
chr5 (105-154)||(24738978-24739027)
chr5 (105-154)||(24751747-24751796)
chr5 (165-218)||(36459430-36459483)
chr5 (104-156)||(20831688-20831740)
chr5 (259-306)||(33473848-33473895)
chr5 (212-265)||(22120595-22120648)
chr5 (212-264)||(33473936-33473988)
chr5 (259-306)||(19076004-19076051)
chr5 (212-263)||(19510484-19510535)
chr5 (212-263)||(28372087-28372138)
chr5 (259-306)||(31253127-31253174)
chr5 (212-263)||(37600014-37600065)
chr5 (212-264)||(15238122-15238174)
chr5 (212-263)||(22339034-22339085)
chr5 (212-263)||(22749183-22749234)
chr5 (259-306)||(36459663-36459710)
chr5 (212-263)||(38146424-38146475)
chr5 (212-263)||(41878657-41878708)
chr5 (104-156)||(1857718-1857770)
chr5 (234-266)||(9774984-9775016)
chr5 (212-264)||(10751839-10751891)
chr5 (104-156)||(21675686-21675738)
chr5 (212-264)||(36459570-36459622)
[»] chr1 (21 HSPs)
chr1 (147-306)||(20032138-20032297)
chr1 (161-264)||(11944965-11945068)
chr1 (161-264)||(43630997-43631100)
chr1 (161-264)||(11809954-11810065)
chr1 (104-156)||(23195691-23195743)
chr1 (104-156)||(21541966-21542018)
chr1 (104-156)||(42096118-42096170)
chr1 (212-264)||(22132103-22132155)
chr1 (259-306)||(636487-636534)
chr1 (259-306)||(11945109-11945156)
chr1 (212-263)||(16370947-16370998)
chr1 (259-306)||(43630909-43630956)
chr1 (259-303)||(11809869-11809913)
chr1 (212-264)||(21406275-21406327)
chr1 (212-264)||(41801283-41801335)
chr1 (107-156)||(24079437-24079486)
chr1 (113-154)||(24109243-24109284)
chr1 (216-264)||(20230143-20230191)
chr1 (212-264)||(39245175-39245227)
chr1 (212-264)||(39248730-39248782)
chr1 (212-264)||(41389669-41389721)
[»] scaffold0098 (2 HSPs)
scaffold0098 (161-306)||(34025-34170)
scaffold0098 (104-156)||(52853-52905)
[»] chr8 (35 HSPs)
chr8 (161-264)||(44494228-44494331)
chr8 (161-265)||(11252086-11252190)
chr8 (161-264)||(21967997-21968108)
chr8 (161-264)||(21980837-21980948)
chr8 (161-264)||(21985820-21985931)
chr8 (161-264)||(22009201-22009312)
chr8 (182-264)||(22000783-22000873)
chr8 (161-264)||(34950057-34950160)
chr8 (165-218)||(42561025-42561078)
chr8 (104-156)||(3697555-3697607)
chr8 (104-156)||(23825007-23825059)
chr8 (259-306)||(8414893-8414940)
chr8 (259-306)||(11774411-11774458)
chr8 (259-306)||(22009113-22009160)
chr8 (259-306)||(34950201-34950248)
chr8 (259-306)||(44494140-44494187)
chr8 (212-264)||(11774318-11774370)
chr8 (212-264)||(21328588-21328640)
chr8 (115-155)||(23653773-23653813)
chr8 (104-156)||(30767164-30767216)
chr8 (259-306)||(11252004-11252051)
chr8 (259-306)||(21980749-21980796)
chr8 (259-306)||(21985732-21985779)
chr8 (113-154)||(31418910-31418951)
chr8 (116-156)||(5239975-5240015)
chr8 (212-264)||(8414981-8415033)
chr8 (212-264)||(21386181-21386233)
chr8 (212-264)||(23427848-23427900)
chr8 (212-264)||(23913287-23913339)
chr8 (259-306)||(21967909-21967956)
chr8 (259-306)||(22000700-22000747)
chr8 (123-156)||(23825053-23825086)
chr8 (126-154)||(31412728-31412756)
chr8 (212-264)||(42560886-42560938)
chr8 (216-264)||(44385838-44385886)
[»] chr4 (27 HSPs)
chr4 (161-259)||(37839201-37839299)
chr4 (161-259)||(42597930-42598028)
chr4 (104-156)||(13452110-13452162)
chr4 (212-264)||(28384873-28384925)
chr4 (107-156)||(37881282-37881331)
chr4 (212-264)||(631752-631804)
chr4 (212-264)||(13813837-13813889)
chr4 (212-264)||(13818325-13818377)
chr4 (212-264)||(22634931-22634983)
chr4 (212-264)||(24048389-24048441)
chr4 (212-263)||(15533241-15533292)
chr4 (259-306)||(28384966-28385013)
chr4 (259-306)||(37839108-37839155)
chr4 (259-306)||(42597837-42597884)
chr4 (212-263)||(49549088-49549139)
chr4 (212-262)||(36036974-36037024)
chr4 (123-156)||(13452156-13452189)
chr4 (212-264)||(10711847-10711899)
chr4 (212-264)||(10925617-10925669)
chr4 (212-264)||(12422965-12423017)
chr4 (212-264)||(17052450-17052502)
chr4 (212-264)||(27532774-27532826)
chr4 (212-263)||(18211626-18211677)
chr4 (212-254)||(30145805-30145847)
chr4 (219-264)||(23996971-23997016)
chr4 (115-155)||(10977225-10977265)
chr4 (212-264)||(15223568-15223620)
[»] chr7 (41 HSPs)
chr7 (164-264)||(11394883-11394983)
chr7 (161-264)||(16185487-16185598)
chr7 (196-264)||(18301357-18301425)
chr7 (104-156)||(32771378-32771430)
chr7 (104-156)||(4279873-4279925)
chr7 (104-156)||(19616205-19616257)
chr7 (212-264)||(41283667-41283719)
chr7 (259-306)||(11394795-11394842)
chr7 (259-306)||(41283760-41283807)
chr7 (165-218)||(15212930-15212983)
chr7 (109-154)||(18958672-18958717)
chr7 (212-264)||(10607325-10607377)
chr7 (212-264)||(11660304-11660356)
chr7 (212-264)||(13891652-13891704)
chr7 (212-264)||(13892035-13892087)
chr7 (212-264)||(20486764-20486816)
chr7 (112-156)||(26294977-26295021)
chr7 (212-264)||(39268318-39268370)
chr7 (212-263)||(14420809-14420860)
chr7 (212-263)||(16005026-16005077)
chr7 (259-306)||(16185639-16185686)
chr7 (212-263)||(18606360-18606411)
chr7 (212-263)||(18871319-18871370)
chr7 (113-156)||(37244549-37244592)
chr7 (212-262)||(146522-146572)
chr7 (104-154)||(15086165-15086215)
chr7 (212-264)||(7520220-7520272)
chr7 (212-264)||(9752512-9752564)
chr7 (212-264)||(15213070-15213122)
chr7 (112-152)||(16952481-16952521)
chr7 (212-264)||(25928376-25928428)
chr7 (123-155)||(32771424-32771456)
chr7 (212-263)||(10897902-10897953)
chr7 (212-254)||(838148-838190)
chr7 (212-254)||(1203328-1203370)
chr7 (212-254)||(16109990-16110032)
chr7 (112-153)||(3327717-3327758)
chr7 (212-264)||(16582443-16582495)
chr7 (212-264)||(18424257-18424309)
chr7 (216-264)||(26291183-26291231)
chr7 (216-264)||(39721222-39721270)
[»] scaffold0815 (2 HSPs)
scaffold0815 (181-264)||(1-84)
scaffold0815 (259-306)||(125-172)
[»] scaffold0016 (2 HSPs)
scaffold0016 (161-265)||(173229-173324)
scaffold0016 (259-306)||(173142-173189)
[»] scaffold0001 (3 HSPs)
scaffold0001 (161-221)||(163708-163768)
scaffold0001 (259-306)||(175481-175528)
scaffold0001 (212-248)||(163588-163624)
[»] chr2 (17 HSPs)
chr2 (104-156)||(21133469-21133521)
chr2 (104-154)||(11465983-11466033)
chr2 (104-156)||(6744539-6744591)
chr2 (104-156)||(19649760-19649812)
chr2 (212-264)||(37379058-37379110)
chr2 (212-264)||(21074512-21074564)
chr2 (104-152)||(27367802-27367850)
chr2 (104-156)||(28971521-28971573)
chr2 (116-156)||(43693323-43693363)
chr2 (212-263)||(6481806-6481857)
chr2 (212-263)||(6485273-6485324)
chr2 (212-263)||(9240696-9240747)
chr2 (212-263)||(19663563-19663614)
chr2 (212-263)||(20260279-20260330)
chr2 (259-306)||(37379151-37379198)
chr2 (212-264)||(9784016-9784068)
chr2 (123-154)||(28971496-28971527)
[»] scaffold0293 (1 HSPs)
scaffold0293 (198-264)||(21344-21410)
[»] scaffold0599 (2 HSPs)
scaffold0599 (165-218)||(4003-4056)
scaffold0599 (212-264)||(4143-4195)
[»] scaffold0355 (1 HSPs)
scaffold0355 (104-154)||(1656-1706)
[»] scaffold1584 (1 HSPs)
scaffold1584 (104-156)||(229-281)
[»] scaffold0106 (1 HSPs)
scaffold0106 (104-156)||(38311-38363)
[»] scaffold0076 (2 HSPs)
scaffold0076 (104-156)||(30360-30412)
scaffold0076 (104-156)||(35761-35813)
[»] scaffold0011 (1 HSPs)
scaffold0011 (104-156)||(174776-174828)
[»] scaffold0679 (2 HSPs)
scaffold0679 (259-306)||(3182-3229)
scaffold0679 (219-264)||(3270-3315)
[»] scaffold0034 (2 HSPs)
scaffold0034 (105-156)||(10322-10373)
scaffold0034 (105-156)||(17618-17669)
[»] scaffold0348 (1 HSPs)
scaffold0348 (104-156)||(2828-2881)
[»] scaffold0326 (1 HSPs)
scaffold0326 (105-154)||(609-658)
[»] scaffold0188 (1 HSPs)
scaffold0188 (105-154)||(31791-31840)
[»] scaffold0575 (1 HSPs)
scaffold0575 (212-264)||(6965-7017)
[»] scaffold0124 (1 HSPs)
scaffold0124 (212-264)||(25572-25624)
[»] scaffold0104 (5 HSPs)
scaffold0104 (104-156)||(25947-25999)
scaffold0104 (123-156)||(25993-26026)
scaffold0104 (123-156)||(27375-27408)
scaffold0104 (123-155)||(26020-26052)
scaffold0104 (123-155)||(27402-27434)
[»] scaffold0031 (1 HSPs)
scaffold0031 (212-264)||(37207-37259)
[»] scaffold0028 (2 HSPs)
scaffold0028 (104-156)||(52599-52651)
scaffold0028 (104-156)||(47194-47245)
[»] scaffold0013 (1 HSPs)
scaffold0013 (212-264)||(74336-74388)
[»] scaffold1427 (1 HSPs)
scaffold1427 (212-263)||(222-273)
[»] scaffold0842 (1 HSPs)
scaffold0842 (212-263)||(5264-5315)
[»] scaffold0337 (1 HSPs)
scaffold0337 (212-263)||(10827-10878)
[»] scaffold0120 (1 HSPs)
scaffold0120 (104-155)||(5346-5397)
[»] scaffold0026 (1 HSPs)
scaffold0026 (212-263)||(109623-109674)
[»] scaffold0012 (1 HSPs)
scaffold0012 (212-263)||(224148-224199)
[»] scaffold0380 (1 HSPs)
scaffold0380 (212-264)||(3996-4048)
[»] scaffold0139 (1 HSPs)
scaffold0139 (212-264)||(23942-23994)
[»] scaffold0080 (2 HSPs)
scaffold0080 (212-264)||(28494-28546)
scaffold0080 (212-264)||(33959-34011)
[»] scaffold0029 (1 HSPs)
scaffold0029 (212-264)||(62844-62896)
[»] scaffold0327 (1 HSPs)
scaffold0327 (212-263)||(18845-18896)
[»] scaffold0015 (1 HSPs)
scaffold0015 (259-306)||(208657-208704)
[»] scaffold0109 (1 HSPs)
scaffold0109 (214-264)||(37202-37252)
[»] scaffold0420 (1 HSPs)
scaffold0420 (104-156)||(9912-9964)
[»] scaffold0142 (1 HSPs)
scaffold0142 (212-264)||(8744-8796)


Alignment Details
Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 104 - 306
Target Start/End: Complemental strand, 14648435 - 14648233
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccgtatgcactcaataataattcttcttaacatccccttaatgctcatga 203  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14648435 tatggcatttacaaccaacaacaccgactcatgcaaatgacatgacaacaccgtatgcactcaataataattcttcttaacatccccttaatgctcatga 14648336  T
Q  204 atagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaacatcataacctcatcatactcatcaacatacacaacgtaagagta 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  14648335 atagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaacatcataacctcatcatactcatcaacataaacaacgtaagagta 14648236  T
Q  304 cac 306  Q
    |||    
T  14648235 cac 14648233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 161 - 264
Target Start/End: Complemental strand, 2249324 - 2249221
Alignment:
Q  161 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaaca 260  Q
    |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  2249324 cactcaataattcttcttcttaacatccccttagtgctcatgaatagaagacaacttaacataaccctcatcaagtacatttaataactcataggtaaca 2249225  T
Q  261 tcat 264  Q
    ||||    
T  2249224 tcat 2249221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 161 - 264
Target Start/End: Complemental strand, 45221070 - 45220967
Alignment:
Q  161 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaaca 260  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||     
T  45221070 cactcaataataattctccttaacatccccgtagtgctcatgaatagaagacaacttaacataaccctcatcaagtacatttaacaactcataggtaacc 45220971  T
Q  261 tcat 264  Q
    ||||    
T  45220970 tcat 45220967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 164 - 264
Target Start/End: Original strand, 5841140 - 5841240
Alignment:
Q  164 tcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    |||||||||||||| |||||||| | |||| |||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||| |||    
T  5841140 tcaataataattctccttaacattctcttagtgctcatgaatagaagtcaacttaacataaccctcatcaagtacatttaacaactcataggtaacctca 5841239  T
Q  264 t 264  Q
    |    
T  5841240 t 5841240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 16840399 - 16840344
Alignment:
Q  166 aataataattcttcttaacatccccttaatgctcatgaatagaagacaacttaaca 221  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  16840399 aataataattcttcttaacatccccttagtactcatgaatagaagacaacttaaca 16840344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 11912309 - 11912362
Alignment:
Q  165 caataataattcttcttaacatccccttaatgctcatgaatagaagacaactta 218  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  11912309 caataataattcttcttaacatccccttagtactcatgaatagaagacaactta 11912362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 51608718 - 51608665
Alignment:
Q  165 caataataattcttcttaacatccccttaatgctcatgaatagaagacaactta 218  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  51608718 caataataattcttcttaacatccccttagtactcatgaatagaagacaactta 51608665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 18757257 - 18757206
Alignment:
Q  105 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  18757257 atggcatttacaaccaacaataccgactcatgcaaatgacatgacaacaccg 18757206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 41156 - 41208
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    |||||||||||||||||| || |||||||||||||||||||||||||| ||||    
T  41156 caacttaacataaccctcatcaagtacatttaacaactcataggtaacctcat 41208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 8583561 - 8583509
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  8583561 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 8583509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 13969128 - 13969076
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  13969128 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 13969076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 13974603 - 13974551
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  13974603 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 13974551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14084441 - 14084493
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  14084441 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 14084493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14089842 - 14089894
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  14089842 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 14089894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 20187584 - 20187628
Alignment:
Q  112 ttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  20187584 ttacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 20187628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 49399383 - 49399435
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  49399383 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 49399435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 41249 - 41296
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  41249 catcataacctcgtcatactcatcaacataaacaacgtaagagtacac 41296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 5841281 - 5841328
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  5841281 catcataacctcgtcatactcatcaacataaacaacgtaagagtacac 5841328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 11850956 - 11850905
Alignment:
Q  105 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||||||||||    
T  11850956 atggcaattacaaccaacaacactgactcatgcaaatgacatgacaacaccg 11850905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 24123456 - 24123405
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacacc 155  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||||||    
T  24123456 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacacc 24123405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 31690864 - 31690814
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 154  Q
    ||||||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  31690864 tatggcaattacatccaacaacaccgactcatgcaaatgacatgacaacac 31690814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 31943351 - 31943401
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 154  Q
    ||||||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  31943351 tatggcaattacatccaacaacaccgactcatgcaaatgacatgacaacac 31943401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 10598028 - 10597976
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||| |||||||    
T  10598028 tatggcaattacaaccaacgacaccgactcatgcaaatgacatgataacaccg 10597976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 10834998 - 10834946
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  10834998 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 10834946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 11912449 - 11912501
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  11912449 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 11912501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 12853420 - 12853368
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  12853420 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 12853368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 14670048 - 14670100
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  14670048 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 14670100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 16326098 - 16326046
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    |||||| ||||||||||| || |||||||||||||||||||||||||| ||||    
T  16326098 caacttgacataaccctcatcaagtacatttaacaactcataggtaacctcat 16326046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 16795525 - 16795577
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  16795525 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 16795577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 2249180 - 2249133
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| || ||||||||||||||    
T  2249180 catcataacctcgtcatactcatcaacatagaccacgtaagagtacac 2249133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 3801992 - 3802043
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  3801992 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 3802043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 14764852 - 14764801
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  14764852 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 14764801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 16326005 - 16325958
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    ||||||||| || ||||||||||||||||| |||||||||||||||||    
T  16326005 catcataacttcgtcatactcatcaacataaacaacgtaagagtacac 16325958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 16840167 - 16840120
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||||    
T  16840167 catcataacatcatcataatcatcaacataaacaacgtaagagtacac 16840120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 18899475 - 18899526
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  18899475 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 18899526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 20249906 - 20249855
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  20249906 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 20249855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 45220926 - 45220879
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  45220926 catcataacctcgtcatactcatcaacataaacaaagtaagagtacac 45220879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 54519619 - 54519670
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  54519619 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 54519670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 10597984 - 10597950
Alignment:
Q  121 ataacaccgactcatgcaaatgacatgacaacacc 155  Q
    |||||||||||||||||||||||||||||||||||    
T  10597984 ataacaccgactcatgcaaatgacatgacaacacc 10597950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 12304196 - 12304246
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatc 262  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||    
T  12304196 caacttaacataaccatcatcaagtacatttaacaactcatagataacatc 12304246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 4590217 - 4590165
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||| ||| |||||||||    
T  4590217 caacttaacataaccatcatcaagtacatttaacaactcctagataacatcat 4590165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 8491789 - 8491737
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||| ||| |||||||||    
T  8491789 caacttaacataaccatcatcaagtacatttaacaactcctagataacatcat 8491737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 8928924 - 8928872
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    |||||||||||||||  | || ||||||||||||||||||||| |||||||||    
T  8928924 caacttaacataaccaccatcaagtacatttaacaactcatagataacatcat 8928872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 13435840 - 13435892
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||  |||||||||    
T  13435840 caacttaacataaccatcatcaagtacatttaacaactcatatataacatcat 13435892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 16840492 - 16840460
Alignment:
Q  161 cactcaataataattcttcttaacatcccctta 193  Q
    |||||||||||||||||||||||||||||||||    
T  16840492 cactcaataataattcttcttaacatcccctta 16840460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 12419275 - 12419326
Alignment:
Q  105 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||| ||| ||| || |||||||||||||||||||||||||| |||||||    
T  12419275 atggcaattataactaacaacaccgactcatgcaaatgacatgaaaacaccg 12419326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 29545995 - 29545944
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    |||||||||| |||| || || ||||||||||||||||||||| ||||||||    
T  29545995 caacttaacacaaccatcatcaagtacatttaacaactcatagataacatca 29545944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 9532280 - 9532330
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatc 262  Q
    ||||| ||||||||| || || ||||||||||||||||||||| |||||||    
T  9532280 caactcaacataaccatcatcaagtacatttaacaactcatagataacatc 9532330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 16751958 - 16751906
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||| | || || ||||||||||||||||||||| ||| |||||    
T  16751958 caacttaacataaacatcatcaagtacatttaacaactcatagataatatcat 16751906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 16840260 - 16840208
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || | ||||||||||||||||||| ||| |||||    
T  16840260 caacttaacataaccatcatcaaatacatttaacaactcatagataaaatcat 16840208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 17318566 - 17318514
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||| ||| |||| ||||    
T  17318566 caacttaacataaccatcatcaagtacatttaacaactcctagataacttcat 17318514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 18933408 - 18933360
Alignment:
Q  216 ttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||| || || |||||| |||||||||||||| |||||||||    
T  18933408 ttaacataaccatcatcaagtacacttaacaactcatagataacatcat 18933360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 30064411 - 30064459
Alignment:
Q  216 ttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||| || || |||||| |||||||||||||| |||||||||    
T  30064411 ttaacataaccatcatcaagtacacttaacaactcatagataacatcat 30064459  T

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Target: scaffold2015 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: scaffold2015
Description:

Target: scaffold2015; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 104 - 306
Target Start/End: Complemental strand, 604 - 402
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccgtatgcactcaataataattcttcttaacatccccttaatgctcatga 203  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  604 tatggcatttacaaccaacaacaccgactcatgcaaatgacatgacaacaccgtatgcactcaataataattcttcttaacatccccttaatgctcatga 505  T
Q  204 atagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaacatcataacctcatcatactcatcaacatacacaacgtaagagta 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  504 atagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaacatcataccctcatcatactcatcaacataaacaacgtaagagta 405  T
Q  304 cac 306  Q
    |||    
T  404 cac 402  T

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Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 104 - 306
Target Start/End: Complemental strand, 14594826 - 14594624
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccgtatgcactcaataataattcttcttaacatccccttaatgctcatga 203  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14594826 tatggcatttacaacaaacaacaccgactcatgcaaatgacatgacaacaccgtatgcactcaataataattcttcttaacatccccttaatgctcatga 14594727  T
Q  204 atagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaacatcataacctcatcatactcatcaacatacacaacgtaagagta 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  14594726 atagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaacatcataccctcatcatactcatcaacataaacaacgtaagagta 14594627  T
Q  304 cac 306  Q
    |||    
T  14594626 cac 14594624  T

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Target: chr6; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 104 - 306
Target Start/End: Original strand, 7429341 - 7429543
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccgtatgcactcaataataattcttcttaacatccccttaatgctcatga 203  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7429341 tatgacatttacaaccaacaacaccgactcatgcaaatgacatgacaacactgtatgcactcaataataattcttcttaacatccccttaatgctcatga 7429440  T
Q  204 atagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaacatcataacctcatcatactcatcaacatacacaacgtaagagta 303  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  7429441 atagaagacaacttaacataacccccctcgagtacatttaacaactcataggtaacaccataacctcatcatactcatcaacataaacaacgtaagagta 7429540  T
Q  304 cac 306  Q
    |||    
T  7429541 cac 7429543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 161 - 264
Target Start/End: Complemental strand, 9623020 - 9622918
Alignment:
Q  161 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaaca 260  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || |||||| ||||||||||||||||||||    
T  9623020 cactcaataataattcttcttaacatccccttagtgctcatgaatagaagacaactttacataaccctcatcaagtaca-ttaacaactcataggtaaca 9622922  T
Q  261 tcat 264  Q
    ||||    
T  9622921 tcat 9622918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 164 - 264
Target Start/End: Original strand, 28707833 - 28707933
Alignment:
Q  164 tcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    |||||||||||||| |||||||| | |||| |||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||| |||    
T  28707833 tcaataataattctccttaacattctcttagtgctcatgaatagaagtcaacttaacataaccctcatcaagtacatttaacaactcataggtaacctca 28707932  T
Q  264 t 264  Q
    |    
T  28707933 t 28707933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 1254037 - 1254090
Alignment:
Q  165 caataataattcttcttaacatccccttaatgctcatgaatagaagacaactta 218  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  1254037 caataataattcttcttaacatccccttagtactcatgaatagaagacaactta 1254090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 23235196 - 23235146
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 154  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  23235196 tatggcaattacaaccaacaacaccgactcatgcaaatgacatgacaacac 23235146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 34297969 - 34297916
Alignment:
Q  165 caataataattcttcttaacatccccttaatgctcatgaatagaagacaactta 218  Q
    ||||||||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  34297969 caataataattcttcttaacatcgccttagtactcatgaatagaagacaactta 34297916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 24562192 - 24562244
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  24562192 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 24562244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 23955484 - 23955531
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  23955484 catcataacctcgtcatactcatcaacataaacaacgtaagagtacac 23955531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 25737775 - 25737830
Alignment:
Q  166 aataataattcttcttaacatccccttaatgctcatgaatagaagacaacttaaca 221  Q
    |||||||||||||| |||||||||||||   |||||||||||||||||||||||||    
T  25737775 aataataattcttcataacatccccttagccctcatgaatagaagacaacttaaca 25737830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 28707974 - 28708021
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  28707974 catcataacctcgtcatactcatcaacataaacaacgtaagagtacac 28708021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 23955391 - 23955443
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    |||||||||||||||||| || ||||||||||||||||||| |||||| ||||    
T  23955391 caacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcat 23955443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 5290435 - 5290384
Alignment:
Q  105 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||| |||||||||| ||||| |||||||||||||||||||| |||||||    
T  5290435 atggcaattacaaccaacaacactgactcatgcaaatgacatgataacaccg 5290384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 26418960 - 26418909
Alignment:
Q  105 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||| ||| |||||| |||||| |||||||||||||||||||||||||||    
T  26418960 atggcaattataaccaacaacaccaactcatgcaaatgacatgacaacaccg 26418909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 27222854 - 27222905
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  27222854 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 27222905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 12941243 - 12941293
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatc 262  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||    
T  12941243 caacttaacataaccatcatcaagtacatttaacaactcatagataacatc 12941293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 18918637 - 18918585
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||| ||| |||||||||    
T  18918637 caacttaacataaccatcatcaagtacatttaacaactcctagataacatcat 18918585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 23400704 - 23400752
Alignment:
Q  216 ttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||| || || ||||||||||||||||||||| |||||||||    
T  23400704 ttaacataaccatcatcaagtacatttaacaactcatagataacatcat 23400752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 23538003 - 23538055
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || |||||||||||||||||||||  ||||||||    
T  23538003 caacttaacataaccatcatcaagtacatttaacaactcatagacaacatcat 23538055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 34297829 - 34297777
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| ||  | ||||||||||||||||||||| |||||||||    
T  34297829 caacttaacataaccatcagcaagtacatttaacaactcatagataacatcat 34297777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 9622877 - 9622830
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||| ||| ||||||||||||||||| || ||||||||||||||    
T  9622877 catcataagctcgtcatactcatcaacataaaccacgtaagagtacac 9622830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 254
Target Start/End: Original strand, 1254181 - 1254223
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcatag 254  Q
    ||||||||||||||| || || |||||||||||||||||||||    
T  1254181 caacttaacataaccatcatcaagtacatttaacaactcatag 1254223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 25738007 - 25738053
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtaca 305  Q
    |||||||||||| ||||| |||||||||||  |||||||||||||||    
T  25738007 catcataacctcgtcataatcatcaacataaccaacgtaagagtaca 25738053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 28290951 - 28290901
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatc 262  Q
    ||||||||||||||| || || |||||||||||||||| |||| |||||||    
T  28290951 caacttaacataaccatcatcaagtacatttaacaacttatagataacatc 28290901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 154
Target Start/End: Complemental strand, 5290392 - 5290359
Alignment:
Q  121 ataacaccgactcatgcaaatgacatgacaacac 154  Q
    ||||||||||||||||||| ||||||||||||||    
T  5290392 ataacaccgactcatgcaactgacatgacaacac 5290359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 304
Target Start/End: Complemental strand, 34297736 - 34297691
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtac 304  Q
    ||||||||| || ||||| ||||||||||| |||||||||||||||    
T  34297736 catcataacatcgtcataatcatcaacataaacaacgtaagagtac 34297691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 2076308 - 2076360
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||| | || || | ||||||||||||||||||| |||||||||    
T  2076308 caacttaacataatcatcatcaaatacatttaacaactcatagataacatcat 2076360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 184; Significance: 1e-99; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 104 - 303
Target Start/End: Complemental strand, 43243924 - 43243725
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccgtatgcactcaataataattcttcttaacatccccttaatgctcatga 203  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43243924 tatggcatttacaaccaacaacatcgactcatgcaaatgacatgacaacaccgtatgcacttaataataattcttcttaacatccccttaatgctcatga 43243825  T
Q  204 atagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaacatcataacctcatcatactcatcaacatacacaacgtaagagta 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43243824 atagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaacatcataacctcatcatactcatcaacataaacaacgtaagagta 43243725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 164 - 264
Target Start/End: Original strand, 19075863 - 19075963
Alignment:
Q  164 tcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||    
T  19075863 tcaataataattctccttaacatccccttagtgctcatgaatagaagacaacttaacataaccctcatcaagtacatttaacaactcataggtaacctca 19075962  T
Q  264 t 264  Q
    |    
T  19075963 t 19075963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 161 - 264
Target Start/End: Complemental strand, 31253318 - 31253215
Alignment:
Q  161 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaaca 260  Q
    |||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||  ||||||||     
T  31253318 cactcaatgataattctccttaacatccccttagtgctcatgaatagaagacaacttaacataaccctcatcaagtacatttaacaacttgtaggtaacc 31253219  T
Q  261 tcat 264  Q
    ||||    
T  31253218 tcat 31253215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 27636144 - 27636094
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 154  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  27636144 tatggcaattacaaccaacaacaccgactcatgcaaatgacatgacaacac 27636094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 24669258 - 24669209
Alignment:
Q  105 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 154  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  24669258 atggcaattacaaccaacaacaccgactcatgcaaatgacatgacaacac 24669209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 24739027 - 24738978
Alignment:
Q  105 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 154  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  24739027 atggcaattacaaccaacaacaccgactcatgcaaatgacatgacaacac 24738978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 24751796 - 24751747
Alignment:
Q  105 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 154  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  24751796 atggcaattacaaccaacaacaccgactcatgcaaatgacatgacaacac 24751747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 36459430 - 36459483
Alignment:
Q  165 caataataattcttcttaacatccccttaatgctcatgaatagaagacaactta 218  Q
    ||||||||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  36459430 caataataatttttcttaacatccccttagtactcatgaatagaagacaactta 36459483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 20831688 - 20831740
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||    
T  20831688 tatggcaattacatccaacaacaccgactcatgcaaatgacatgacaacaccg 20831740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 33473895 - 33473848
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  33473895 catcataacctcgtcatactcatcaacataaacaacgtaagagtacac 33473848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 22120648 - 22120595
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcata 265  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||||    
T  22120648 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcata 22120595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 33473988 - 33473936
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    |||||||||||||||||| || ||||||||||||||||||| |||||| ||||    
T  33473988 caacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcat 33473936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 19076004 - 19076051
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  19076004 catcataacctcgtcatactcatcaacataaacaaagtaagagtacac 19076051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 19510484 - 19510535
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  19510484 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 19510535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 28372138 - 28372087
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  28372138 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 28372087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 31253174 - 31253127
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  31253174 catcataacctcgtcatactcatcaacataaacaaggtaagagtacac 31253127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 37600065 - 37600014
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  37600065 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 37600014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 15238174 - 15238122
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||| | || || ||||||||||||||||||||| |||||||||    
T  15238174 caacttaacataaacatcatcaagtacatttaacaactcatagataacatcat 15238122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 22339034 - 22339085
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    |||| |||||||||| || || ||||||||||||||||||||| ||||||||    
T  22339034 caacgtaacataaccatcatcaagtacatttaacaactcatagataacatca 22339085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 22749183 - 22749234
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || |||||||||||| |||||||| ||||||||    
T  22749183 caacttaacataaccatcatcaagtacatttaaccactcatagataacatca 22749234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 36459663 - 36459710
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    ||||||||| || ||||| ||||||||||| |||||||||||||||||    
T  36459663 catcataacatcgtcataatcatcaacataaacaacgtaagagtacac 36459710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 38146475 - 38146424
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||| | || || ||||||||||||||||||||| ||||||||    
T  38146475 caacttaacataatcatcatcaagtacatttaacaactcatagataacatca 38146424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 41878708 - 41878657
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||  || || ||||||||||||||||||||| ||||||||    
T  41878708 caacttaacataactatcatcaagtacatttaacaactcatagataacatca 41878657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 1857770 - 1857718
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||  ||||||||| |||||||||||||||||| | |||||| ||||||    
T  1857770 tatggcaactacaaccaacaacaccgactcatgcaaaggtcatgaccacaccg 1857718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 266
Target Start/End: Original strand, 9774984 - 9775016
Alignment:
Q  234 agtacatttaacaactcataggtaacatcataa 266  Q
    ||||||||||||||||||||| |||||||||||    
T  9774984 agtacatttaacaactcatagataacatcataa 9775016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 10751839 - 10751891
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||| | || || ||||||||||||||||||||| ||| |||||    
T  10751839 caacttaacataaacatcatcaagtacatttaacaactcatagataatatcat 10751891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 21675738 - 21675686
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||  ||||||||| |||||||||||||||||| | |||||| ||||||    
T  21675738 tatggcaactacaaccaacaacaccgactcatgcaaaggtcatgaccacaccg 21675686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 36459570 - 36459622
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||| | || |  ||||||||||||||||||||| |||||||||    
T  36459570 caacttaacataatcatcattaagtacatttaacaactcatagataacatcat 36459622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 4e-78; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 147 - 306
Target Start/End: Complemental strand, 20032297 - 20032138
Alignment:
Q  147 gacaacaccgtatgcactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttaacataaccctcctcgagtacatttaaca 246  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20032297 gacatcaccatatgcactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttaacataaccctcctcgagtacatttaaca 20032198  T
Q  247 actcataggtaacatcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20032197 actcataggtaacatcataacctcatcatactcatcaacataaacaacgtaagagtacac 20032138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 161 - 264
Target Start/End: Original strand, 11944965 - 11945068
Alignment:
Q  161 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaaca 260  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||     
T  11944965 cactcaataataattctccttaacatccccttagtgctcatgaatagaagacaacttaacataaccctcatcaagtacatttaacaactcgtaggtaacc 11945064  T
Q  261 tcat 264  Q
    ||||    
T  11945065 tcat 11945068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 161 - 264
Target Start/End: Complemental strand, 43631100 - 43630997
Alignment:
Q  161 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaaca 260  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||     
T  43631100 cactcaataataattctccttaacatccccttagtgctcatgaatagaagacaacttaacataaccctcatcaagtacatttaacaactcgtaggtaacc 43631001  T
Q  261 tcat 264  Q
    ||||    
T  43631000 tcat 43630997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 264
Target Start/End: Complemental strand, 11810065 - 11809954
Alignment:
Q  161 cactcaataataattcttcttaacatccccttaatgctcatgaatagaaga--------caacttaacataaccctcctcgagtacatttaacaactcat 252  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||        ||||||||||| |||||| || |||||||||||||||||||    
T  11810065 cactcaatattaattcttcttaacatccccttaatgctcgtgaatagaagacgacttatcaacttaacatgaccctcatcaagtacatttaacaactcat 11809966  T
Q  253 aggtaacatcat 264  Q
    ||||||||||||    
T  11809965 aggtaacatcat 11809954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 23195743 - 23195691
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23195743 tatgtcatttacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 23195691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21541966 - 21542018
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  21541966 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 21542018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 42096170 - 42096118
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  42096170 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 42096118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 22132155 - 22132103
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  22132155 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 22132103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 636534 - 636487
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  636534 catcataacctcgtcatactcatcaacataaacaaagtaagagtacac 636487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 11945109 - 11945156
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  11945109 catcataacctcgtcatactcatcaacataaacaaagtaagagtacac 11945156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 16370947 - 16370998
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  16370947 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 16370998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 43630956 - 43630909
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  43630956 catcataacctcgtcatactcatcaacataaacaaagtaagagtacac 43630909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 11809913 - 11809869
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagta 303  Q
    |||||||||||| |||||||||||||||||  |||||||||||||    
T  11809913 catcataacctcgtcatactcatcaacataaccaacgtaagagta 11809869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 21406275 - 21406327
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||| ||| |||||||||    
T  21406275 caacttaacataaccatcatcaagtacatttaacaactcctagataacatcat 21406327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 41801335 - 41801283
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||| |||||    
T  41801335 caacttaacataaccatcatcaagtacatttaacaactcatagataatatcat 41801283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 24079437 - 24079486
Alignment:
Q  107 ggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||| |||||| ||| ||||||||||||| ||||||||||||| ||||||    
T  24079437 ggcaattacaaacaacaacaccgactcatacaaatgacatgactacaccg 24079486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 24109284 - 24109243
Alignment:
Q  113 tacaaccaataacaccgactcatgcaaatgacatgacaacac 154  Q
    ||||||||| || |||||||||||||| ||||||||||||||    
T  24109284 tacaaccaacaagaccgactcatgcaactgacatgacaacac 24109243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 20230191 - 20230143
Alignment:
Q  216 ttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||| || || |||||| |||||||||||||| |||||||||    
T  20230191 ttaacataaccatcatcaagtacacttaacaactcatagataacatcat 20230143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 39245227 - 39245175
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||| | || || ||||||||||||||||||||| ||| |||||    
T  39245227 caacttaacataaacatcatcaagtacatttaacaactcatagataatatcat 39245175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 39248782 - 39248730
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||| | || || ||||||||||||||||||||| ||| |||||    
T  39248782 caacttaacataaacatcatcaagtacatttaacaactcatagataatatcat 39248730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 41389721 - 41389669
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||| | || || ||||||||||||||||||||| ||| |||||    
T  41389721 caacttaacataaacatcatcaagtacatttaacaactcatagataatatcat 41389669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 126; Significance: 5e-65; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 161 - 306
Target Start/End: Original strand, 34025 - 34170
Alignment:
Q  161 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaaca 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  34025 cactcaataataattcttcttaacatccccttaatgctcatgaatagcagacaacctaacataacactcctcgagtacatttaacaactcataggtaaca 34124  T
Q  261 tcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||    
T  34125 tcataacctcgtcatactcatcaacataaacaacgtaagagtacac 34170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 52905 - 52853
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    ||||||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  52905 tatggcaattacaaccaacaacaccgactcatgcaaatgacatgtcaacaccg 52853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 161 - 264
Target Start/End: Complemental strand, 44494331 - 44494228
Alignment:
Q  161 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaaca 260  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||| ||||||||||||    
T  44494331 cactcaataataattattcttaacatccccttagtgctcatgaatagaagacaacttaacataaccatcatcaagtacatttaacaattcataggtaaca 44494232  T
Q  261 tcat 264  Q
    ||||    
T  44494231 tcat 44494228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 161 - 265
Target Start/End: Complemental strand, 11252190 - 11252086
Alignment:
Q  161 cactcaataataattcttcttaacatccccttaatgctcatg-aatagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaac 259  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  11252190 cactcaataataattcttcttaacatccccttagtgctcatgaaatagaagacaacttaacataa-cctcatcaagtacatttaacaactcataggtaac 11252092  T
Q  260 atcata 265  Q
    ||||||    
T  11252091 atcata 11252086  T

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Target: chr8; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 161 - 264
Target Start/End: Complemental strand, 21968108 - 21967997
Alignment:
Q  161 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaa--------cttaacataaccctcctcgagtacatttaacaactcat 252  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||        ||||||||||||||| || |||||||||||||||||||    
T  21968108 cactcaataataattcttcttaacatccccttagtgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 21968009  T
Q  253 aggtaacatcat 264  Q
    ||||||||||||    
T  21968008 aggtaacatcat 21967997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 161 - 264
Target Start/End: Complemental strand, 21980948 - 21980837
Alignment:
Q  161 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaa--------cttaacataaccctcctcgagtacatttaacaactcat 252  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||        ||||||||||||||| || |||||||||||||||||||    
T  21980948 cactcaataataattcttcttaacatccccttagtgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 21980849  T
Q  253 aggtaacatcat 264  Q
    ||||||||||||    
T  21980848 aggtaacatcat 21980837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 161 - 264
Target Start/End: Complemental strand, 21985931 - 21985820
Alignment:
Q  161 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaa--------cttaacataaccctcctcgagtacatttaacaactcat 252  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||        ||||||||||||||| || |||||||||||||||||||    
T  21985931 cactcaataataattcttcttaacatccccttagtgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 21985832  T
Q  253 aggtaacatcat 264  Q
    ||||||||||||    
T  21985831 aggtaacatcat 21985820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 264
Target Start/End: Complemental strand, 22009312 - 22009201
Alignment:
Q  161 cactcaataataattcttcttaacatccccttaatgctcatgaatagaaga--------caacttaacataaccctcctcgagtacatttaacaactcat 252  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||| |        |||||||||||||||||| || |||||||||||||||||||    
T  22009312 cacttaataataattcttcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 22009213  T
Q  253 aggtaacatcat 264  Q
    ||||||||||||    
T  22009212 aggtaacatcat 22009201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 22000873 - 22000783
Alignment:
Q  182 aacatccccttaatgctcatgaatagaagacaactta--------acataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    |||||||||||| ||||||||||||||||||||||||        ||||||||||| || |||||||||||||||||||||||||||||||    
T  22000873 aacatccccttagtgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcataggtaacatcat 22000783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 264
Target Start/End: Original strand, 34950057 - 34950160
Alignment:
Q  161 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaaca 260  Q
    ||||||||||||||||||||||||||||| ||| |||||||||| | || | ||  ||| | ||  ||| || |||||||||||||||||||||||||||    
T  34950057 cactcaataataattcttcttaacatcccattagtgctcatgaaaaaaaaaaaaaataaaaaaaaactcatcaagtacatttaacaactcataggtaaca 34950156  T
Q  261 tcat 264  Q
    ||||    
T  34950157 tcat 34950160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 42561078 - 42561025
Alignment:
Q  165 caataataattcttcttaacatccccttaatgctcatgaatagaagacaactta 218  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  42561078 caataataattcttcttaacatccccttagtactcatgaatagaagacaactta 42561025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 3697555 - 3697607
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  3697555 tatggcatttacaaccaacaacaccgactcatgcaaatgacattacaacaccg 3697607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 23825007 - 23825059
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  23825007 tatggcatttacaaccaacaacaccaactcatgcaaatgacatgacaacaccg 23825059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 8414940 - 8414893
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  8414940 catcataacctcgtcatactcatcaacataaacaacgtaagagtacac 8414893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 11774411 - 11774458
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  11774411 catcataacctcgtcatactcatcaacataaacaacgtaagagtacac 11774458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 22009160 - 22009113
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  22009160 catcataacctcgtcatactcatcaacataaacaacgtaagagtacac 22009113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 34950201 - 34950248
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  34950201 catcataacctcgtcatactcatcaacataaacaacgtaagagtacac 34950248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 44494187 - 44494140
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  44494187 catcataacctcgtcatactcatcaacataaacaacgtaagagtacac 44494140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 11774318 - 11774370
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    |||||||||||||||||| || ||||||||||||||||||| |||||| ||||    
T  11774318 caacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcat 11774370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 21328588 - 21328640
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  21328588 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 21328640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 23653773 - 23653813
Alignment:
Q  115 caaccaataacaccgactcatgcaaatgacatgacaacacc 155  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  23653773 caaccaacaacaccgactcatgcaaatgacatgacaacacc 23653813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 30767216 - 30767164
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||  ||||||||| |||||||||||||||||||||||| |||||||||    
T  30767216 tatggcaactacaaccaacaacaccgactcatgcaaatgacataacaacaccg 30767164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 11252051 - 11252004
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| || ||||||||||||||    
T  11252051 catcataacctcgtcatactcatcaacataaaccacgtaagagtacac 11252004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 21980796 - 21980749
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  21980796 catcataacctcgtcatactcatcaacataaacaatgtaagagtacac 21980749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 21985779 - 21985732
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  21985779 catcataacctcgtcatactcatcaacataaacaatgtaagagtacac 21985732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 31418951 - 31418910
Alignment:
Q  113 tacaaccaataacaccgactcatgcaaatgacatgacaacac 154  Q
    ||||||||| || |||||||||||||||||||||||||||||    
T  31418951 tacaaccaacaagaccgactcatgcaaatgacatgacaacac 31418910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 5239975 - 5240015
Alignment:
Q  116 aaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||| || |||||||||||||||||||||||||||||||    
T  5239975 aaccaacaaaaccgactcatgcaaatgacatgacaacaccg 5240015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 8415033 - 8414981
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    |||||||| ||||||||  || |||||||||||||||||||||||||| ||||    
T  8415033 caacttaaaataaccctaatcaagtacatttaacaactcataggtaacctcat 8414981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 21386181 - 21386233
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||| ||| |||||||||    
T  21386181 caacttaacataaccatcatcaagtacatttaacaactcctagataacatcat 21386233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 23427848 - 23427900
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || |  ||||||||||||||||||||| |||||||||    
T  23427848 caacttaacataaccatcattaagtacatttaacaactcatagataacatcat 23427900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 23913287 - 23913339
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || |||||||||||||||| |||| |||||||||    
T  23913287 caacttaacataaccatcatcaagtacatttaacaacttatagataacatcat 23913339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 21967956 - 21967909
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||| |||||| |||||    
T  21967956 catcataacctcgtcatactcatcaacataaacaatgtaagattacac 21967909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 22000747 - 22000700
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||  ||||||||||||||||| |||| ||||||||||||    
T  22000747 catcataacctagtcatactcatcaacataaacaatgtaagagtacac 22000700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 23825053 - 23825086
Alignment:
Q  123 aacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||||||||||||| |||||||||||||||    
T  23825053 aacaccgactcatgcaaacgacatgacaacaccg 23825086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 154
Target Start/End: Complemental strand, 31412756 - 31412728
Alignment:
Q  126 accgactcatgcaaatgacatgacaacac 154  Q
    |||||||||||||||||||||||||||||    
T  31412756 accgactcatgcaaatgacatgacaacac 31412728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 42560938 - 42560886
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    |||||||||||||||  | ||  |||||||||||||||||||| |||||||||    
T  42560938 caacttaacataaccaccatcacgtacatttaacaactcatagataacatcat 42560886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 44385886 - 44385838
Alignment:
Q  216 ttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||| | || || ||||||||||||||||||||| |||||||||    
T  44385886 ttaacataatcatcatcaagtacatttaacaactcatagataacatcat 44385838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 37839299 - 37839201
Alignment:
Q  161 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaac 259  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||  ||||||||    
T  37839299 cactcaataataattctccttaacatccccttagtgctcatgaatagaagacaacttaacataaccctcatcaagtacatttaacaacttgtaggtaac 37839201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 42598028 - 42597930
Alignment:
Q  161 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaac 259  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||  ||||||||    
T  42598028 cactcaataataattctccttaacatccccttagtgctcatgaatagaagacaacttaacataaccctcatcaagtacatttaacaacttttaggtaac 42597930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 13452110 - 13452162
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  13452110 tatggcaattacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 13452162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 28384873 - 28384925
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    |||||||||||||||||| || |||||||||||||||||||||||||| ||||    
T  28384873 caacttaacataaccctcatcaagtacatttaacaactcataggtaacctcat 28384925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 37881282 - 37881331
Alignment:
Q  107 ggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||||||    
T  37881282 ggcaattacaaccaacaacaccgactcatgcaaatgacatgactacaccg 37881331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 631804 - 631752
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  631804 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 631752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 13813889 - 13813837
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  13813889 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 13813837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 13818377 - 13818325
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  13818377 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 13818325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 22634983 - 22634931
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  22634983 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 22634931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 24048441 - 24048389
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  24048441 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 24048389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 15533241 - 15533292
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  15533241 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 15533292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 28384966 - 28385013
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    ||||||||| || ||||||||||||||||| |||||||||||||||||    
T  28384966 catcataacatcgtcatactcatcaacataaacaacgtaagagtacac 28385013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 37839155 - 37839108
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  37839155 catcataacctcgtcatactcatcaacataaacaaagtaagagtacac 37839108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 42597884 - 42597837
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  42597884 catcataacctcgtcatactcatcaacataaacaaagtaagagtacac 42597837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 49549139 - 49549088
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  49549139 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 49549088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 36036974 - 36037024
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatc 262  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||    
T  36036974 caacttaacataaccatcatcaagtacatttaacaactcatagataacatc 36037024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 13452156 - 13452189
Alignment:
Q  123 aacaccgactcatgcaaatgacatgacaacaccg 156  Q
    ||||||||||||||||||||||||||||||||||    
T  13452156 aacaccgactcatgcaaatgacatgacaacaccg 13452189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 10711847 - 10711899
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||| ||| |||||||||    
T  10711847 caacttaacataaccatcatcaagtacatttaacaactcctagataacatcat 10711899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 10925617 - 10925669
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||| ||| |||||||||    
T  10925617 caacttaacataaccatcatcaagtacatttaacaactcctagataacatcat 10925669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 12422965 - 12423017
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||  || || ||||||||||||||||||||| |||||||||    
T  12422965 caacttaacataactatcatcaagtacatttaacaactcatagataacatcat 12423017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 17052502 - 17052450
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||| | || || ||||||||||||||||||||| |||||||||    
T  17052502 caacttaacataatcatcatcaagtacatttaacaactcatagataacatcat 17052450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 27532774 - 27532826
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||| ||| |||||||||    
T  27532774 caacttaacataaccatcatcaagtacatttaacaactcctagataacatcat 27532826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 18211626 - 18211677
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||| ||||||||| || || ||||||||||||||||||||| ||||||||    
T  18211626 caactcaacataaccatcatcaagtacatttaacaactcatagataacatca 18211677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 254
Target Start/End: Original strand, 30145805 - 30145847
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcatag 254  Q
    ||||||||||||||| || || |||||||||||||||||||||    
T  30145805 caacttaacataaccatcatcaagtacatttaacaactcatag 30145847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 23997016 - 23996971
Alignment:
Q  219 acataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    |||||||| || || ||||||||||||||||||||| |||||||||    
T  23997016 acataaccatcatcaagtacatttaacaactcatagataacatcat 23996971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 10977265 - 10977225
Alignment:
Q  115 caaccaataacaccgactcatgcaaatgacatgacaacacc 155  Q
    ||||||| || | ||||||||||||||||||||||||||||    
T  10977265 caaccaacaataacgactcatgcaaatgacatgacaacacc 10977225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 15223568 - 15223620
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||| | || || ||||||||||||||||||||| ||| |||||    
T  15223568 caacttaacataaacatcatcaagtacatttaacaactcatagataatatcat 15223620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 6e-31; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 164 - 264
Target Start/End: Complemental strand, 11394983 - 11394883
Alignment:
Q  164 tcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    |||||||||||||| |||||||| | |||| |||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||| |||    
T  11394983 tcaataataattctccttaacattctcttagtgctcatgaatagaagtcaacttaacataaccctcatcaagtacatttaacaactcataggtaacctca 11394884  T
Q  264 t 264  Q
    |    
T  11394883 t 11394883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 264
Target Start/End: Original strand, 16185487 - 16185598
Alignment:
Q  161 cactcaataataattcttcttaacatccccttaatgctcatgaatagaaga--------caacttaacataaccctcctcgagtacatttaacaactcat 252  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||        ||||||||||| |||||| || |||||||||||||||||||    
T  16185487 cactcaatattaattcttcttaacatccccttagtgctcatgaatagaagacgacttatcaacttaacatgaccctcatcaagtacatttaacaactcat 16185586  T
Q  253 aggtaacatcat 264  Q
    ||||||||||||    
T  16185587 aggtaacatcat 16185598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 18301357 - 18301425
Alignment:
Q  196 gctcatgaatagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||||||||||||||||||| || || ||||||||||||||||| ||| |||||||||    
T  18301357 gctcatgaatagaagacaacttaacataaccatcatcaagtacatttaacaactcctagataacatcat 18301425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 32771378 - 32771430
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  32771378 tatggcaattacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 32771430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 4279873 - 4279925
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  4279873 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 4279925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 19616205 - 19616257
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  19616205 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 19616257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 41283667 - 41283719
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    |||||||||||||||||| || |||||||||||||||||||||||||| ||||    
T  41283667 caacttaacataaccctcatcaagtacatttaacaactcataggtaacctcat 41283719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 11394842 - 11394795
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  11394842 catcataacctcgtcatactcatcaacataaacaacgtaagagtacac 11394795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 41283760 - 41283807
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  41283760 catcataacctcgtcatactcatcaacataaacaacgtaagagtacac 41283807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 15212930 - 15212983
Alignment:
Q  165 caataataattcttcttaacatccccttaatgctcatgaatagaagacaactta 218  Q
    ||||||||||||||||||||||||||||| | ||||||||| || |||||||||    
T  15212930 caataataattcttcttaacatccccttagtactcatgaattgaggacaactta 15212983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 18958717 - 18958672
Alignment:
Q  109 catttacaaccaataacaccgactcatgcaaatgacatgacaacac 154  Q
    ||||||||||||| || |||||||||||||||||||||||||||||    
T  18958717 catttacaaccaacaataccgactcatgcaaatgacatgacaacac 18958672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 10607377 - 10607325
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  10607377 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 10607325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 11660304 - 11660356
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  11660304 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 11660356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 13891652 - 13891704
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  13891652 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 13891704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 13892035 - 13892087
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  13892035 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 13892087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 20486764 - 20486816
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  20486764 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 20486816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 26295021 - 26294977
Alignment:
Q  112 ttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||    
T  26295021 ttacaaccaacaacaccgactcatgcaaatgacatgactacaccg 26294977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 39268370 - 39268318
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  39268370 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 39268318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 14420809 - 14420860
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  14420809 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 14420860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 16005026 - 16005077
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  16005026 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 16005077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 16185639 - 16185686
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  16185639 catcataacctcgtcatactcatcaacataaccaacgtaagagtacac 16185686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 18606360 - 18606411
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  18606360 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 18606411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 18871319 - 18871370
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  18871319 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 18871370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 37244592 - 37244549
Alignment:
Q  113 tacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    ||||||||| || |||||||||||||||||||||||||||||||    
T  37244592 tacaaccaacaagaccgactcatgcaaatgacatgacaacaccg 37244549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 146522 - 146572
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatc 262  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||    
T  146522 caacttaacataaccatcatcaagtacatttaacaactcatagataacatc 146572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 15086215 - 15086165
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 154  Q
    ||||||| | |||||||| ||||||||||||||||||||||||||| ||||    
T  15086215 tatggcaatcacaaccaacaacaccgactcatgcaaatgacatgaccacac 15086165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 7520272 - 7520220
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||| | || || ||||||||||||||||||||| |||||||||    
T  7520272 caacttaacataatcatcatcaagtacatttaacaactcatagataacatcat 7520220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 9752564 - 9752512
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| ||  | ||||||||||||||||||||| |||||||||    
T  9752564 caacttaacataaccatcaccaagtacatttaacaactcatagataacatcat 9752512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 15213070 - 15213122
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||| | |||||||||    
T  15213070 caacttaacataaccatcatcaagtacatttaacaactcatggataacatcat 15213122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 152
Target Start/End: Complemental strand, 16952521 - 16952481
Alignment:
Q  112 ttacaaccaataacaccgactcatgcaaatgacatgacaac 152  Q
    |||||||||| ||||||||||||||||||||||| ||||||    
T  16952521 ttacaaccaacaacaccgactcatgcaaatgacacgacaac 16952481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 25928428 - 25928376
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || |  ||||||||||||||||||||| |||||||||    
T  25928428 caacttaacataaccatcataaagtacatttaacaactcatagataacatcat 25928376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 32771424 - 32771456
Alignment:
Q  123 aacaccgactcatgcaaatgacatgacaacacc 155  Q
    |||||||||||||||||||||||||||||||||    
T  32771424 aacaccgactcatgcaaatgacatgacaacacc 32771456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 10897953 - 10897902
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || |||||||||||| |||||||| ||||||||    
T  10897953 caacttaacataaccatcatcaagtacatttaacgactcatagataacatca 10897902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 838190 - 838148
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcatag 254  Q
    ||||||||||||||| || || |||||||||||||||||||||    
T  838190 caacttaacataaccatcatcaagtacatttaacaactcatag 838148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 1203370 - 1203328
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcatag 254  Q
    ||||||||||||||| || || |||||||||||||||||||||    
T  1203370 caacttaacataaccatcatcaagtacatttaacaactcatag 1203328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 16110032 - 16109990
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcatag 254  Q
    ||||||||||||||| || || |||||||||||||||||||||    
T  16110032 caacttaacataaccatcatcaagtacatttaacaactcatag 16109990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 153
Target Start/End: Original strand, 3327717 - 3327758
Alignment:
Q  112 ttacaaccaataacaccgactcatgcaaatgacatgacaaca 153  Q
    |||||||| | ||||||||||||||||||||||||| |||||    
T  3327717 ttacaaccgacaacaccgactcatgcaaatgacatggcaaca 3327758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 16582443 - 16582495
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||| ||||||| || || ||||||||||||||||||||  |||||||||    
T  16582443 caacttatcataaccatcatcaagtacatttaacaactcataaataacatcat 16582495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 18424257 - 18424309
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||| | || || ||||||||||||||||||||| ||| |||||    
T  18424257 caacttaacataaacatcatcaagtacatttaacaactcatagataatatcat 18424309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 26291183 - 26291231
Alignment:
Q  216 ttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||| || || |||||| |||||||||||||| |||||||||    
T  26291183 ttaacataaccatcatcaagtacacttaacaactcatagataacatcat 26291231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 39721222 - 39721270
Alignment:
Q  216 ttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||| || || ||||||||||||||||||||| || ||||||    
T  39721222 ttaacataaccatcatcaagtacatttaacaactcatagatatcatcat 39721270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 264
Target Start/End: Original strand, 1 - 84
Alignment:
Q  181 taacatccccttaatgctcatgaatagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||| ||||| ||||||||||||||||||| ||||||||||||||| || |||||||||||||||||| ||||||| ||||    
T  1 taacatctccttagtgctcatgaatagaagacagcttaacataaccctcatcaagtacatttaacaactcaaaggtaacctcat 84  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 125 - 172
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  125 catcataacctcgtcatactcatcaacataaacaaagtaagagtacac 172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 265
Target Start/End: Complemental strand, 173324 - 173229
Alignment:
Q  161 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaaca 260  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||         |||||||||||||| || |||||||||||||||| ||||||||||    
T  173324 cactcaataataattcttcttaacatccccttagtgctcatgagta---------ttaacataaccctcatcaagtacatttaacaactaataggtaaca 173234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 173189 - 173142
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  173189 catcataacctcgtcatactcatcaacataaacaacgtaagagtacac 173142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 163768 - 163708
Alignment:
Q  161 cactcaataataattcttcttaacatccccttaatgctcatgaatagaagacaacttaaca 221  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  163768 cactcaataataattcttcttaacatccccttagtactcatgaatagaagacaacttaaca 163708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 175481 - 175528
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  175481 catcataacctcgtcatactcatcaacataaacaatgtaagagtacac 175528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 163624 - 163588
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaac 248  Q
    |||||||||||||||||| || |||||||||||||||    
T  163624 caacttaacataaccctcatcaagtacatttaacaac 163588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 21133521 - 21133469
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21133521 tatggcatttacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 21133469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 11465983 - 11466033
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 154  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11465983 tatggcatttacaaccaacaacaccgactcatgcaaatgacatgacaacac 11466033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 6744591 - 6744539
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  6744591 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 6744539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 19649812 - 19649760
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    ||||||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  19649812 tatggcaattacaaccaacaacaccgactcatgcaaatgacatgtcaacaccg 19649760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 37379058 - 37379110
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    |||||||||||||||||| || |||||||||||||||||||||||||| ||||    
T  37379058 caacttaacataaccctcatcaagtacatttaacaactcataggtaacctcat 37379110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 21074564 - 21074512
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  21074564 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 21074512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 27367850 - 27367802
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaac 152  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  27367850 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaac 27367802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 28971573 - 28971521
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    ||||||| |||||||||| ||||||||||||||  ||||||||||||||||||    
T  28971573 tatggcaattacaaccaacaacaccgactcatgtgaatgacatgacaacaccg 28971521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 43693323 - 43693363
Alignment:
Q  116 aaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  43693323 aaccaacaacaccgactcatgcaaatgacatgacaacaccg 43693363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 6481806 - 6481857
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  6481806 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 6481857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 6485273 - 6485324
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  6485273 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 6485324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 9240696 - 9240747
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  9240696 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 9240747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 19663614 - 19663563
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  19663614 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 19663563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 20260279 - 20260330
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  20260279 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 20260330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 37379151 - 37379198
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  37379151 catcataacctcgtcatactcatcaacataaacaaagtaagagtacac 37379198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 9784016 - 9784068
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || |||||||| |||||||||||| |||||||||    
T  9784016 caacttaacataaccatcatcaagtacattaaacaactcatagataacatcat 9784068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 154
Target Start/End: Complemental strand, 28971527 - 28971496
Alignment:
Q  123 aacaccgactcatgcaaatgacatgacaacac 154  Q
    ||||||||||||||||||||||||||||||||    
T  28971527 aacaccgactcatgcaaatgacatgacaacac 28971496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 21410 - 21344
Alignment:
Q  198 tcatgaatagaagacaacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||| ||||||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  21410 tcatgaataaaagacaacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 21344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 4003 - 4056
Alignment:
Q  165 caataataattcttcttaacatccccttaatgctcatgaatagaagacaactta 218  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  4003 caataataattcttcttaacatccccttagtactcatgaatagaagacaactta 4056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 4143 - 4195
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  4143 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 4195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 1706 - 1656
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 154  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  1706 tatgacatttacaaccaacaacaccgactcatgcaaatgacatgacaacac 1656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1584 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1584
Description:

Target: scaffold1584; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 229 - 281
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    ||||||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  229 tatggcaattacaaccaacaacaccgactcatgcaaatgacatgtcaacaccg 281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 38311 - 38363
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  38311 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 38363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 30412 - 30360
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  30412 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 30360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 35813 - 35761
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  35813 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 35761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 174828 - 174776
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  174828 tatggcaactacaaccaacaacaccgactcatgcaaatgacatgacaacaccg 174776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 3229 - 3182
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  3229 catcataacctcgtcatactcatcaacataaacaacgtaagagtacac 3182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 3315 - 3270
Alignment:
Q  219 acataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||| || |||||||||||||||||||||||||| ||||    
T  3315 acataaccctcatcaagtacatttaacaactcataggtaacctcat 3270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 10373 - 10322
Alignment:
Q  105 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||||||||||    
T  10373 atggcaattacaaccaacaacacagactcatgcaaatgacatgacaacaccg 10322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 17669 - 17618
Alignment:
Q  105 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||| |||||||||| ||||| |||||||||||||||||| |||||||||    
T  17669 atggcaattacaaccaacaacacagactcatgcaaatgacataacaacaccg 17618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 2828 - 2881
Alignment:
Q  104 tatggcatttacaa-ccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    ||||||| |||||| |||| ||||||||||||||||||||||||||||||||||    
T  2828 tatggcaattacaatccaacaacaccgactcatgcaaatgacatgacaacaccg 2881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 658 - 609
Alignment:
Q  105 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 154  Q
    |||||| |||||||||| ||||||||||||||||| ||||||||||||||    
T  658 atggcaattacaaccaacaacaccgactcatgcaactgacatgacaacac 609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 31840 - 31791
Alignment:
Q  105 atggcatttacaaccaataacaccgactcatgcaaatgacatgacaacac 154  Q
    |||||| |||||||||| ||||||||||||||||| ||||||||||||||    
T  31840 atggcaattacaaccaacaacaccgactcatgcaactgacatgacaacac 31791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 7017 - 6965
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  7017 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 6965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 25624 - 25572
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  25624 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 25572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 37; Significance: 0.000000000007; HSPs: 5)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 25947 - 25999
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    ||||||| |||||||||| |||||||||||||||||||  |||||||||||||    
T  25947 tatggcaattacaaccaacaacaccgactcatgcaaattgcatgacaacaccg 25999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 25993 - 26026
Alignment:
Q  123 aacaccgactcatgcaaatgacatgacaacaccg 156  Q
    ||||||||||||||||||||||||||||||||||    
T  25993 aacaccgactcatgcaaatgacatgacaacaccg 26026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 27375 - 27408
Alignment:
Q  123 aacaccgactcatgcaaatgacatgacaacaccg 156  Q
    ||||||||||||||||||||||||||||||||||    
T  27375 aacaccgactcatgcaaatgacatgacaacaccg 27408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 26020 - 26052
Alignment:
Q  123 aacaccgactcatgcaaatgacatgacaacacc 155  Q
    |||||||||||||||||||||||||||||||||    
T  26020 aacaccgactcatgcaaatgacatgacaacacc 26052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 27402 - 27434
Alignment:
Q  123 aacaccgactcatgcaaatgacatgacaacacc 155  Q
    |||||||||||||||||||||||||||||||||    
T  27402 aacaccgactcatgcaaatgacatgacaacacc 27434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 37259 - 37207
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  37259 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 37207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 52651 - 52599
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||  ||||||||| |||||||||||||||||| |||||||||||||||    
T  52651 tatggcaactacaaccaacaacaccgactcatgcaaaggacatgacaacaccg 52599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 47245 - 47194
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    |||||||  ||||||||| ||||||||||||||| || |||||||||||||||    
T  47245 tatggcaactacaaccaacaacaccgactcatgc-aaggacatgacaacaccg 47194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 74388 - 74336
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  74388 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcat 74336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 222 - 273
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  222 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 5264 - 5315
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  5264 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 5315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 10878 - 10827
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  10878 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 10827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 5397 - 5346
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacacc 155  Q
    ||||||| ||||| |||| |||||||||||||||||||||||| ||||||||    
T  5397 tatggcaattacatccaacaacaccgactcatgcaaatgacataacaacacc 5346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 109623 - 109674
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  109623 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 109674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 224199 - 224148
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  224199 caacttaacataaccatcatcaagtacatttaacaactcatagataacatca 224148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 3996 - 4048
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||| ||| |||||||||    
T  3996 caacttaacataaccatcatcaagtacatttaacaactcctagataacatcat 4048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 23994 - 23942
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||| ||| |||||||||    
T  23994 caacttaacataaccatcatcaagtacatttaacaactcctagataacatcat 23942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 28494 - 28546
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||  || || ||||||||||||||||||||| |||||||||    
T  28494 caacttaacataacgatcatcaagtacatttaacaactcatagataacatcat 28546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 33959 - 34011
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||  || || ||||||||||||||||||||| |||||||||    
T  33959 caacttaacataacgatcatcaagtacatttaacaactcatagataacatcat 34011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 62896 - 62844
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || || ||||||||||||||||| ||| |||||||||    
T  62896 caacttaacataaccatcatcaagtacatttaacaactcctagataacatcat 62844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 18845 - 18896
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatca 263  Q
    ||||||||||||||| || || |||||||||||||||| |||| ||||||||    
T  18845 caacttaacataaccatcatcaagtacatttaacaacttatagataacatca 18896  T

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Target: scaffold0015 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 208657 - 208704
Alignment:
Q  259 catcataacctcatcatactcatcaacatacacaacgtaagagtacac 306  Q
    |||||||||||| ||||||||||||||||| |||| |||||| |||||    
T  208657 catcataacctcgtcatactcatcaacataaacaatgtaagattacac 208704  T

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Target: scaffold0109 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 37252 - 37202
Alignment:
Q  214 acttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||| || || ||||||||||||||||| ||| |||||||||    
T  37252 acttaacataaccatcatcaagtacatttaacaactcctagataacatcat 37202  T

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Target: scaffold0420 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 9912 - 9964
Alignment:
Q  104 tatggcatttacaaccaataacaccgactcatgcaaatgacatgacaacaccg 156  Q
    ||||||| ||||| |||| || ||||||||||||| ||||||| |||||||||    
T  9912 tatggcaattacatccaacaataccgactcatgcatatgacataacaacaccg 9964  T

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Target: scaffold0142 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 8796 - 8744
Alignment:
Q  212 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 264  Q
    ||||||||||||||| || ||  |||||||||||||||| ||| |||||||||    
T  8796 caacttaacataaccatcatcatgtacatttaacaactcgtagataacatcat 8744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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