View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0819_low_25 (Length: 304)
Name: NF0819_low_25
Description: NF0819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0819_low_25 |
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Alignment Details
Target: chr3 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 32 - 228
Target Start/End: Complemental strand, 1036931 - 1036735
Alignment:
| Q |
32 |
agcataggcaaatggcatgatctatttcaattgacatggtttcttattgatatatttcatttcaaaagatattgtagaacaagcttgtgaaactctagtg |
131 |
Q |
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| T |
1036931 |
agcataggcaaatggcatgatctatttcaattgacatggtttcttattgatatatttcatttcaaaagatattgtacaacaagcttgtgaaactctagtg |
1036832 |
T |
|
| Q |
132 |
ttgaatcatgatcaagttgaaatgtttataagatttgatttactacgctattgtatcatactatacaaataaaaataatttgtcttgagcaacaaat |
228 |
Q |
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| T |
1036831 |
ttgaatcatgatcaagttgaaatgtttataagatttgatttactacgctattgtatcatactatacaaataaaaataatttgtcttgagcaacaaat |
1036735 |
T |
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