View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0821-Insertion-1 (Length: 1014)

Name: NF0821-Insertion-1
Description: NF0821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0821-Insertion-1
NF0821-Insertion-1
[»] chr1 (73 HSPs)
chr1 (8-692)||(48417810-48418497)
chr1 (773-1014)||(48417569-48417813)
chr1 (681-755)||(50503191-50503265)
chr1 (681-814)||(34953890-34954028)
chr1 (681-755)||(33289033-33289107)
chr1 (681-753)||(14365425-14365497)
chr1 (694-802)||(33765808-33765921)
chr1 (687-813)||(48083499-48083630)
chr1 (681-754)||(43728194-43728267)
chr1 (694-755)||(47969506-47969567)
chr1 (681-752)||(14891799-14891870)
chr1 (694-801)||(43738612-43738724)
chr1 (686-752)||(1597202-1597268)
chr1 (686-796)||(3549792-3549907)
chr1 (681-758)||(10832049-10832126)
chr1 (686-755)||(44349943-44350012)
chr1 (687-747)||(21321384-21321444)
chr1 (711-755)||(39362847-39362891)
chr1 (686-750)||(42761466-42761530)
chr1 (681-811)||(3013618-3013753)
chr1 (681-755)||(6508405-6508479)
chr1 (681-755)||(8338683-8338757)
chr1 (703-813)||(9590739-9590854)
chr1 (681-755)||(31998247-31998321)
chr1 (686-755)||(2492534-2492603)
chr1 (681-742)||(17342355-17342416)
chr1 (762-814)||(23398413-23398466)
chr1 (687-747)||(2352961-2353021)
chr1 (703-755)||(8465956-8466008)
chr1 (687-755)||(11324491-11324559)
chr1 (687-755)||(11482512-11482580)
chr1 (693-733)||(13043371-13043411)
chr1 (681-749)||(26344228-26344296)
chr1 (719-755)||(45639555-45639591)
chr1 (694-814)||(23575311-23575437)
chr1 (704-755)||(26674244-26674295)
chr1 (702-749)||(40988391-40988438)
chr1 (687-813)||(41161479-41161610)
chr1 (694-745)||(50755245-50755296)
chr1 (681-755)||(33939355-33939429)
chr1 (681-755)||(45115228-45115302)
chr1 (694-755)||(7461326-7461387)
chr1 (687-752)||(36486553-36486618)
chr1 (686-743)||(41970858-41970915)
chr1 (681-810)||(50550127-50550261)
chr1 (695-755)||(37248146-37248206)
chr1 (762-813)||(45115263-45115315)
chr1 (681-732)||(3906842-3906893)
chr1 (694-801)||(5595427-5595539)
chr1 (681-740)||(13043413-13043472)
chr1 (762-808)||(24981934-24981981)
chr1 (681-752)||(45010846-45010917)
chr1 (704-755)||(50154337-50154388)
chr1 (705-755)||(9002787-9002837)
chr1 (681-747)||(13877051-13877117)
chr1 (681-755)||(14967283-14967357)
chr1 (681-747)||(18607151-18607217)
chr1 (681-747)||(25547479-25547545)
chr1 (701-755)||(31325838-31325892)
chr1 (686-728)||(44673899-44673941)
chr1 (681-750)||(6758554-6758623)
chr1 (762-810)||(8338673-8338722)
chr1 (686-755)||(8465984-8466053)
chr1 (693-734)||(13048677-13048718)
chr1 (693-734)||(13053674-13053715)
chr1 (687-760)||(21444218-21444291)
chr1 (687-752)||(24115765-24115830)
chr1 (686-755)||(31699000-31699069)
chr1 (686-755)||(31889101-31889170)
chr1 (694-755)||(35544591-35544652)
chr1 (681-734)||(38834619-38834672)
chr1 (705-758)||(39617340-39617393)
chr1 (681-734)||(39708187-39708240)
[»] chr5 (41 HSPs)
chr5 (681-813)||(14772543-14772678)
chr5 (681-813)||(71267-71406)
chr5 (686-755)||(43482830-43482899)
chr5 (681-755)||(694214-694288)
chr5 (695-801)||(3100412-3100523)
chr5 (694-755)||(38370445-38370506)
chr5 (699-755)||(22650914-22650970)
chr5 (681-755)||(18033413-18033487)
chr5 (687-755)||(11795750-11795818)
chr5 (687-755)||(33075079-33075147)
chr5 (686-753)||(5984043-5984110)
chr5 (681-813)||(10437646-10437782)
chr5 (687-749)||(25773307-25773369)
chr5 (694-747)||(780724-780777)
chr5 (687-813)||(25408538-25408669)
chr5 (686-747)||(30371399-30371460)
chr5 (694-755)||(31706017-31706078)
chr5 (686-755)||(35032328-35032397)
chr5 (684-813)||(8681696-8681830)
chr5 (665-755)||(31691317-31691405)
chr5 (681-735)||(4082816-4082870)
chr5 (681-755)||(14153377-14153451)
chr5 (681-755)||(17967373-17967447)
chr5 (681-755)||(26141763-26141837)
chr5 (681-734)||(32398082-32398135)
chr5 (681-750)||(36895045-36895114)
chr5 (762-813)||(43117381-43117433)
chr5 (763-813)||(15549419-15549470)
chr5 (692-747)||(17153442-17153497)
chr5 (681-724)||(29177800-29177843)
chr5 (686-741)||(37067837-37067892)
chr5 (705-747)||(13157365-13157407)
chr5 (705-755)||(35969073-35969123)
chr5 (711-752)||(10463006-10463047)
chr5 (681-753)||(19868982-19869055)
chr5 (686-727)||(26045278-26045319)
chr5 (684-717)||(26432584-26432617)
chr5 (686-755)||(31154688-31154757)
chr5 (687-728)||(33652494-33652535)
chr5 (681-755)||(33652620-33652698)
chr5 (694-755)||(41005726-41005787)
[»] chr2 (57 HSPs)
chr2 (681-801)||(1961317-1961442)
chr2 (681-813)||(15119772-15119909)
chr2 (681-808)||(7079370-7079502)
chr2 (681-755)||(2050098-2050172)
chr2 (686-755)||(10996259-10996328)
chr2 (681-813)||(26003430-26003567)
chr2 (693-813)||(38465784-38465909)
chr2 (686-755)||(15859609-15859678)
chr2 (681-745)||(11342038-11342102)
chr2 (763-815)||(11726489-11726541)
chr2 (686-749)||(596040-596103)
chr2 (693-796)||(15916745-15916852)
chr2 (686-755)||(32630419-32630488)
chr2 (762-814)||(13994283-13994335)
chr2 (687-755)||(37195066-37195134)
chr2 (686-749)||(19951509-19951572)
chr2 (681-755)||(32460749-32460824)
chr2 (686-755)||(8383198-8383267)
chr2 (704-813)||(23377973-23378087)
chr2 (686-755)||(36547354-36547423)
chr2 (762-814)||(13988385-13988437)
chr2 (687-747)||(20504257-20504317)
chr2 (681-813)||(42530500-42530637)
chr2 (681-744)||(15900288-15900351)
chr2 (340-434)||(729817-729911)
chr2 (681-755)||(8740527-8740601)
chr2 (704-814)||(11726526-11726641)
chr2 (705-755)||(14393178-14393228)
chr2 (681-755)||(26234082-26234156)
chr2 (702-752)||(32218637-32218687)
chr2 (705-755)||(37396236-37396286)
chr2 (681-755)||(38618453-38618527)
chr2 (686-744)||(40187312-40187370)
chr2 (762-814)||(8510598-8510651)
chr2 (705-749)||(5762533-5762577)
chr2 (719-755)||(10602352-10602388)
chr2 (686-755)||(11153216-11153287)
chr2 (686-742)||(39939832-39939888)
chr2 (694-749)||(15861723-15861778)
chr2 (763-813)||(27331853-27331904)
chr2 (688-755)||(37182831-37182898)
chr2 (681-755)||(40204448-40204525)
chr2 (681-752)||(41805282-41805353)
chr2 (694-732)||(4032689-4032727)
chr2 (681-755)||(11093588-11093661)
chr2 (694-752)||(27497328-27497386)
chr2 (699-745)||(31175107-31175153)
chr2 (681-755)||(32143464-32143538)
chr2 (705-755)||(41823773-41823823)
chr2 (704-738)||(42955108-42955142)
chr2 (694-755)||(10041563-10041624)
chr2 (686-747)||(13304484-13304545)
chr2 (762-814)||(13882776-13882829)
chr2 (762-814)||(14022901-14022954)
chr2 (763-815)||(14308740-14308793)
chr2 (686-739)||(23378016-23378069)
chr2 (686-755)||(43732151-43732220)
[»] chr3 (58 HSPs)
chr3 (681-814)||(52215888-52216026)
chr3 (686-801)||(37897695-37897815)
chr3 (681-814)||(12744909-12745047)
chr3 (681-755)||(29389335-29389409)
chr3 (686-755)||(9492689-9492758)
chr3 (681-813)||(10872667-10872804)
chr3 (687-755)||(35987489-35987557)
chr3 (681-813)||(45736682-45736819)
chr3 (694-755)||(50466834-50466894)
chr3 (694-755)||(14756429-14756490)
chr3 (686-747)||(51060676-51060737)
chr3 (704-755)||(26121570-26121621)
chr3 (681-755)||(331856-331930)
chr3 (705-755)||(4181989-4182039)
chr3 (705-755)||(26244412-26244462)
chr3 (681-755)||(29222861-29222934)
chr3 (688-737)||(31474749-31474798)
chr3 (762-813)||(331891-331943)
chr3 (687-747)||(32758980-32759040)
chr3 (699-747)||(35237704-35237752)
chr3 (698-755)||(37807568-37807627)
chr3 (681-752)||(43177096-43177170)
chr3 (686-808)||(24075447-24075572)
chr3 (704-755)||(26243710-26243761)
chr3 (688-747)||(29512197-29512256)
chr3 (686-749)||(47334655-47334718)
chr3 (765-814)||(7882275-7882325)
chr3 (681-747)||(24694294-24694360)
chr3 (681-755)||(38677573-38677647)
chr3 (691-733)||(47650522-47650564)
chr3 (686-755)||(3074836-3074905)
chr3 (681-750)||(3648762-3648831)
chr3 (686-755)||(4821439-4821508)
chr3 (694-747)||(34327529-34327582)
chr3 (686-755)||(51253728-51253797)
chr3 (762-813)||(8504845-8504897)
chr3 (686-814)||(27224574-27224707)
chr3 (694-755)||(43599156-43599221)
chr3 (700-752)||(49412312-49412364)
chr3 (762-814)||(54595883-54595935)
chr3 (688-755)||(4980331-4980398)
chr3 (681-752)||(41743651-41743722)
chr3 (762-813)||(42930110-42930160)
chr3 (684-722)||(1752348-1752386)
chr3 (681-755)||(8504858-8504932)
chr3 (764-813)||(9170107-9170157)
chr3 (686-744)||(20619004-20619062)
chr3 (762-815)||(30519691-30519745)
chr3 (762-815)||(38677558-38677612)
chr3 (689-755)||(52866475-52866541)
chr3 (722-801)||(54783384-54783468)
chr3 (766-814)||(7829140-7829189)
chr3 (687-728)||(7981230-7981271)
chr3 (687-732)||(38455246-38455291)
chr3 (762-810)||(40639802-40639851)
chr3 (762-814)||(48191709-48191762)
chr3 (686-747)||(50745032-50745093)
chr3 (706-751)||(53638424-53638469)
[»] chr7 (56 HSPs)
chr7 (681-752)||(26477222-26477293)
chr7 (681-752)||(26553662-26553733)
chr7 (704-813)||(10095714-10095828)
chr7 (686-807)||(3882820-3882949)
chr7 (702-755)||(21586872-21586925)
chr7 (681-754)||(30138847-30138920)
chr7 (681-750)||(31813419-31813488)
chr7 (687-755)||(46495426-46495494)
chr7 (681-782)||(6847284-6847389)
chr7 (693-755)||(26385683-26385745)
chr7 (693-755)||(26904801-26904863)
chr7 (681-813)||(6455557-6455694)
chr7 (686-739)||(9930401-9930454)
chr7 (681-813)||(2943207-2943344)
chr7 (681-813)||(43103067-43103204)
chr7 (702-748)||(45985589-45985635)
chr7 (702-748)||(45989949-45989995)
chr7 (693-746)||(4089856-4089909)
chr7 (762-814)||(5950287-5950340)
chr7 (694-755)||(32549879-32549940)
chr7 (686-755)||(45531962-45532031)
chr7 (712-796)||(21096199-21096288)
chr7 (762-813)||(25245236-25245288)
chr7 (687-747)||(27554511-27554571)
chr7 (681-752)||(41803730-41803801)
chr7 (681-813)||(3882560-3882697)
chr7 (681-755)||(24280879-24280953)
chr7 (681-755)||(29205320-29205394)
chr7 (686-732)||(32490602-32490648)
chr7 (686-731)||(21886480-21886525)
chr7 (710-755)||(35238976-35239021)
chr7 (682-755)||(39960296-39960369)
chr7 (687-732)||(44416613-44416658)
chr7 (762-813)||(6455544-6455596)
chr7 (687-747)||(22106681-22106741)
chr7 (683-743)||(31663046-31663106)
chr7 (684-732)||(35641489-35641537)
chr7 (687-747)||(40529610-40529670)
chr7 (688-752)||(41106099-41106163)
chr7 (681-752)||(8447778-8447849)
chr7 (704-755)||(23797406-23797457)
chr7 (686-732)||(2533953-2533999)
chr7 (721-755)||(18534916-18534950)
chr7 (681-755)||(26385633-26385707)
chr7 (705-755)||(27942357-27942407)
chr7 (681-739)||(44819672-44819730)
chr7 (687-744)||(716303-716360)
chr7 (704-749)||(5084494-5084539)
chr7 (681-738)||(7716290-7716346)
chr7 (694-755)||(9555281-9555342)
chr7 (702-755)||(18113264-18113317)
chr7 (687-736)||(22281457-22281506)
chr7 (687-728)||(35216490-35216531)
chr7 (687-740)||(39013089-39013142)
chr7 (719-756)||(39136612-39136649)
chr7 (686-747)||(43130246-43130307)
[»] chr4 (77 HSPs)
chr4 (686-806)||(40952350-40952475)
chr4 (687-756)||(3511723-3511792)
chr4 (694-755)||(4708594-4708655)
chr4 (694-755)||(10572779-10572840)
chr4 (694-794)||(19878300-19878405)
chr4 (686-813)||(4406236-4406368)
chr4 (681-755)||(48603572-48603646)
chr4 (686-755)||(5816552-5816621)
chr4 (694-747)||(18423913-18423966)
chr4 (686-747)||(21142156-21142217)
chr4 (696-801)||(18626716-18626824)
chr4 (686-810)||(36786163-36786292)
chr4 (686-749)||(7740554-7740617)
chr4 (681-755)||(32599488-32599562)
chr4 (693-755)||(38298110-38298172)
chr4 (690-755)||(48414914-48414979)
chr4 (687-755)||(22493590-22493658)
chr4 (681-753)||(24798135-24798207)
chr4 (702-814)||(40814698-40814815)
chr4 (695-755)||(49231300-49231360)
chr4 (699-755)||(50686063-50686119)
chr4 (704-755)||(4484105-4484156)
chr4 (687-746)||(7215547-7215606)
chr4 (694-752)||(23071427-23071485)
chr4 (686-813)||(33693982-33694114)
chr4 (684-742)||(48995567-48995625)
chr4 (694-755)||(55416321-55416380)
chr4 (686-755)||(16170923-16170992)
chr4 (686-755)||(21113050-21113119)
chr4 (716-794)||(23003976-23004059)
chr4 (681-818)||(53176298-53176440)
chr4 (687-813)||(54106470-54106601)
chr4 (686-755)||(21649391-21649462)
chr4 (695-747)||(24448687-24448739)
chr4 (681-749)||(35151725-35151793)
chr4 (693-813)||(39533776-39533901)
chr4 (687-755)||(44239842-44239910)
chr4 (681-744)||(51829180-51829244)
chr4 (704-755)||(8826923-8826974)
chr4 (681-755)||(10308243-10308322)
chr4 (681-748)||(41346475-41346542)
chr4 (681-747)||(12070059-12070125)
chr4 (681-755)||(16468262-16468336)
chr4 (762-811)||(23568473-23568523)
chr4 (686-748)||(35425265-35425327)
chr4 (681-755)||(36072578-36072652)
chr4 (681-735)||(38539486-38539540)
chr4 (686-755)||(46803420-46803490)
chr4 (681-755)||(49481888-49481962)
chr4 (681-726)||(16203427-16203472)
chr4 (695-752)||(24133620-24133677)
chr4 (686-747)||(40575905-40575966)
chr4 (706-747)||(40881493-40881534)
chr4 (694-747)||(54931840-54931893)
chr4 (762-813)||(14450952-14451004)
chr4 (681-737)||(19597009-19597065)
chr4 (681-753)||(25138691-25138763)
chr4 (701-753)||(30035209-30035261)
chr4 (762-813)||(54713093-54713145)
chr4 (687-750)||(4370414-4370477)
chr4 (681-752)||(8826873-8826944)
chr4 (686-737)||(19595430-19595481)
chr4 (704-755)||(51232302-51232353)
chr4 (681-735)||(3094275-3094329)
chr4 (681-739)||(6462786-6462844)
chr4 (681-755)||(14450965-14451039)
chr4 (705-755)||(37175464-37175514)
chr4 (686-747)||(1829613-1829674)
chr4 (687-732)||(3504091-3504136)
chr4 (762-810)||(19878145-19878194)
chr4 (704-753)||(26920732-26920781)
chr4 (686-747)||(27537069-27537130)
chr4 (687-744)||(33558866-33558923)
chr4 (699-752)||(41654561-41654614)
chr4 (686-755)||(47397893-47397962)
chr4 (687-732)||(52674830-52674875)
chr4 (687-732)||(54508183-54508228)
[»] scaffold0036 (1 HSPs)
scaffold0036 (690-796)||(89610-89721)
[»] chr8 (39 HSPs)
chr8 (681-755)||(10117028-10117102)
chr8 (682-755)||(18603467-18603540)
chr8 (681-750)||(45045440-45045509)
chr8 (681-813)||(10934611-10934748)
chr8 (694-755)||(3225801-3225862)
chr8 (694-751)||(9015878-9015935)
chr8 (687-755)||(23575023-23575091)
chr8 (686-752)||(25267988-25268053)
chr8 (686-755)||(2805871-2805940)
chr8 (681-755)||(7258643-7258717)
chr8 (681-755)||(41753816-41753890)
chr8 (704-813)||(24287780-24287894)
chr8 (681-801)||(5888343-5888468)
chr8 (686-815)||(13080082-13080215)
chr8 (695-747)||(35874487-35874539)
chr8 (686-806)||(34580574-34580699)
chr8 (681-755)||(23627674-23627748)
chr8 (681-755)||(27518373-27518447)
chr8 (681-755)||(36058829-36058902)
chr8 (704-749)||(467980-468025)
chr8 (686-755)||(24017731-24017800)
chr8 (686-755)||(33385229-33385298)
chr8 (699-747)||(17923731-17923779)
chr8 (681-752)||(2382647-2382718)
chr8 (681-752)||(13496496-13496567)
chr8 (704-755)||(36916614-36916665)
chr8 (686-753)||(40640338-40640405)
chr8 (681-731)||(3444630-3444680)
chr8 (681-755)||(6614743-6614817)
chr8 (681-755)||(13290043-13290117)
chr8 (705-755)||(29916189-29916239)
chr8 (681-755)||(33070223-33070297)
chr8 (763-815)||(10117064-10117117)
chr8 (681-734)||(10679140-10679193)
chr8 (686-755)||(11335625-11335694)
chr8 (694-747)||(13211260-13211313)
chr8 (686-735)||(20269777-20269826)
chr8 (686-735)||(21056406-21056455)
chr8 (762-814)||(27518408-27518461)
[»] chr6 (44 HSPs)
chr6 (681-747)||(11746294-11746360)
chr6 (681-755)||(12383647-12383721)
chr6 (681-755)||(20704081-20704155)
chr6 (688-755)||(17214253-17214320)
chr6 (693-755)||(2827579-2827641)
chr6 (681-755)||(13281542-13281616)
chr6 (681-796)||(13506842-13506961)
chr6 (687-816)||(8145940-8146075)
chr6 (688-754)||(6263365-6263432)
chr6 (681-752)||(11637178-11637249)
chr6 (686-801)||(14218204-14218324)
chr6 (682-752)||(3102148-3102217)
chr6 (681-747)||(8449642-8449708)
chr6 (681-747)||(8458446-8458512)
chr6 (681-796)||(12218457-12218579)
chr6 (681-752)||(28555008-28555079)
chr6 (681-755)||(31398284-31398358)
chr6 (686-755)||(3199776-3199845)
chr6 (694-755)||(5571579-5571640)
chr6 (687-732)||(13277103-13277148)
chr6 (686-755)||(16465564-16465633)
chr6 (694-755)||(31158901-31158961)
chr6 (762-806)||(14031672-14031716)
chr6 (762-814)||(15517085-15517137)
chr6 (687-747)||(21506529-21506589)
chr6 (762-813)||(26527185-26527237)
chr6 (762-817)||(31398319-31398375)
chr6 (686-734)||(31761282-31761330)
chr6 (762-814)||(34379730-34379782)
chr6 (687-750)||(7158270-7158333)
chr6 (705-752)||(10258365-10258412)
chr6 (681-752)||(12383848-12383919)
chr6 (762-808)||(26527283-26527330)
chr6 (681-752)||(34170086-34170157)
chr6 (681-755)||(6032974-6033048)
chr6 (681-727)||(6894822-6894868)
chr6 (705-755)||(10644296-10644346)
chr6 (681-755)||(18097068-18097142)
chr6 (681-755)||(30916962-30917036)
chr6 (681-755)||(32254879-32254953)
chr6 (762-814)||(6560750-6560803)
chr6 (689-750)||(7718400-7718461)
chr6 (694-747)||(31714601-31714654)
chr6 (694-755)||(33053786-33053847)
[»] scaffold0009 (3 HSPs)
scaffold0009 (686-810)||(145966-146095)
scaffold0009 (686-747)||(216286-216347)
scaffold0009 (681-755)||(7715-7789)
[»] scaffold0149 (1 HSPs)
scaffold0149 (687-812)||(24620-24750)
[»] scaffold0113 (1 HSPs)
scaffold0113 (687-751)||(40515-40579)
[»] scaffold0341 (2 HSPs)
scaffold0341 (681-755)||(2428-2502)
scaffold0341 (681-755)||(10083-10157)
[»] scaffold0181 (1 HSPs)
scaffold0181 (686-756)||(10624-10694)
[»] scaffold0020 (1 HSPs)
scaffold0020 (681-755)||(139304-139378)
[»] scaffold0631 (1 HSPs)
scaffold0631 (687-744)||(4361-4418)
[»] scaffold1476 (1 HSPs)
scaffold1476 (706-749)||(693-735)
[»] scaffold0470 (1 HSPs)
scaffold0470 (681-755)||(4029-4103)
[»] scaffold0026 (1 HSPs)
scaffold0026 (686-732)||(88935-88981)
[»] scaffold0635 (1 HSPs)
scaffold0635 (694-755)||(5446-5507)
[»] scaffold0512 (1 HSPs)
scaffold0512 (376-417)||(2365-2406)


Alignment Details
Target: chr1 (Bit Score: 630; Significance: 0; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 630; E-Value: 0
Query Start/End: Original strand, 8 - 692
Target Start/End: Complemental strand, 48418497 - 48417810
Alignment:
Q  8 cttataatactcaagttcaagatgtgggaaccttctgttctaat---gttgtccaacaacaacaccctagtaattatcaacacggttttataaataatta 104  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48418497 cttataatactcaagttcaagatgtgggaaccttcggttctaataccgttgtccaacaacaacaccctagtaattatcaacacggttttataaataatta 48418398  T
Q  105 tgctacgaaccaggcaatgggaggacttcctactggccatggccatggttatgggttcccaggttatgaggattataggatatggcaggggccttctatt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48418397 tgctacgaaccaggcaatgggaggacttcctactggccatggccatggttatgggttcccaggttatgaggattataggatatggcaggggccttctatt 48418298  T
Q  205 gaggctaccgctgcacagagaatgcattgttttcatacttgtagagggtcgttggtttcaatggcgatgaatcgacgtgattgtcgatatatacaacaga 304  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48418297 gaggctaccgccgcacagagaatgcattgttttcatacttgtagagggtcgttggtttcaatggcgatgaatcgacgtgattgtcgatatatacaacaga 48418198  T
Q  305 agatcagagtgggcaacccaacagatgttgccctaatcctctatgaagtgaaggattctttacacatgctcatgacacacccttatggaaaccacttgat 404  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48418197 agatcagaatgggcaacccaacagatgttgcgctaatcctctatgaagtgaaggattctttacacatgctcatgacacacccttatggaaaccacttgat 48418098  T
Q  405 tcaaaagatttttgaagcaaggagaggtatcatcacccgtgatcagaagcattctcttgtttacttgattatcttgaattaccaaaagctgagagacgtg 504  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  48418097 tcaaaagatttttgaagcaaggagaggtatcatcacccgtgatcagaagcattctcttgtttacttgattatctcgaattaccaaaagctgagaaacgtg 48417998  T
Q  505 tgcatggactttcatgggtatgtaaatactatcaatgatattttggagattaattactaatcatagtcaaatatacttaatgatgattgtaaagacatca 604  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  48417997 tgcatggactttcatgggtatgtaaatactatcaatgatattttggagattaattactaattatagtcaaatatacttaatgatgattgtaaagacatca 48417898  T
Q  605 aaacttgatgtgttatgtggctcagattgcggccgccactttttgtttgtttttaatcgtatacacactctgatcacactgttataaa 692  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  48417897 aaacttgatgtgttatgcggctcagattgtggccgccactttttgtttgtttttaatcgtatacacactctaatcacactgttttaaa 48417810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 773 - 1014
Target Start/End: Complemental strand, 48417813 - 48417569
Alignment:
Q  773 taaaatgttatttttgcttataattgtgagcggagggtgtacaaaccattagatttaaattttattctcttaattaaattgtgtaattctattttattct 872  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  48417813 taaaatgttatttttgcttataattgtgagcggagggtgttcaaaccattagatttaaattttattctcttaattaaattgtgtaattctattttattta 48417714  T
Q  873 ttttgcagaactcgcgttatgcagataatgctgaagaatattaagtgtctgttcatgc-atatgtagttgtgtataccatgaagcatatcactgttgcat 971  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  48417713 ttttgtagaactcgcgttatgcagataatgctgaagaatattaagtgtctgttcatgcaatatgtagttgtgtataccatgaagcatatcactgttgcat 48417614  T
Q  972 tgatgaaaa--tttaatggcagttatgttattgttgaatgtctaa 1014  Q
    |||||||||  ||||||||||||||||||||||||||||||||||    
T  48417613 tgatgaaaaattttaatggcagttatgttattgttgaatgtctaa 48417569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 50503191 - 50503265
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  50503191 cactattataaacacaaatttatattttagatttattcaattaatgatgtatatgatctttattatagaccacat 50503265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 681 - 814
Target Start/End: Complemental strand, 34954028 - 34953890
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 776  Q
    |||| |||||| ||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||  |     | |||||||||| ||||    
T  34954028 cactattataagcaaaaatttatattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgaatttaaa 34953929  T
Q  777 atgtt-atttttgcttataattgtgagcggagggtgtac 814  Q
    || || ||||||||||||||| ||||  |||||||||||    
T  34953928 atattgatttttgcttataatagtgactggagggtgtac 34953890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 33289107 - 33289033
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||||||||| || || |||||||||||||||||||||||||| |||||| ||||||||||| ||||||    
T  33289107 cactgttataaacaaagatctacattttagatttatttaattaatgatgcatatgaactttattataggccacat 33289033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 681 - 753
Target Start/End: Complemental strand, 14365497 - 14365425
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccac 753  Q
    |||| |||||||||||||| ||||||||| ||| |||||||||||||| |||||||||||| |||||||||||    
T  14365497 cactattataaacaaaaatatatattttatattcatttaattaatgatatatatgatcttttttatagaccac 14365425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 694 - 802
Target Start/End: Original strand, 33765808 - 33765921
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt-atttttg 788  Q
    |||||||||||||||| |||  |||||||||||||||||||| |||||||||||||||||||  |     | || ||||||||||||||||| |||||||    
T  33765808 aaaaatttatattttaaattcgtttaattaatgatgtatatggtctttattatagaccacatacatcatttaataaatgaatctaaaatgttgatttttg 33765907  T
Q  789 cttataattgtgag 802  Q
    ||||||||| ||||    
T  33765908 cttataattatgag 33765921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 687 - 813
Target Start/End: Complemental strand, 48083630 - 48083499
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt- 781  Q
    ||||| ||||| ||||||||||||||| ||| ||||||| | |||||||||||||||||||||||||||  |     | ||||||||| ||||||| ||     
T  48083630 tataagcaaaactttatattttagattcattcaattaataacgtatatgatctttattatagaccacatacatcatttaatgaatgaacctaaaatatta 48083531  T
Q  782 atttttgcttataattgtgagcggagggtgta 813  Q
    ||||||||||||||| |||| | |||||||||    
T  48083530 atttttgcttataatagtgaccagagggtgta 48083499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 681 - 754
Target Start/End: Original strand, 43728194 - 43728267
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccaca 754  Q
    |||| |||||||||||||| |||||||||| || |||||||||||||| ||||| |||||||||||| ||||||    
T  43728194 cactattataaacaaaaatctatattttaggttaatttaattaatgatatatataatctttattataaaccaca 43728267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 694 - 755
Target Start/End: Original strand, 47969506 - 47969567
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||| ||||||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  47969506 aaaaaattatattttagattcgtttaattaatgatgtatatgatatttattatagaccacat 47969567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 681 - 752
Target Start/End: Complemental strand, 14891870 - 14891799
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    |||| |||||| |||||||||| |||||||||||||  ||| ||||||||||||| ||||||||||||||||    
T  14891870 cactattataagcaaaaatttaaattttagatttatccaataaatgatgtatatggtctttattatagacca 14891799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 694 - 801
Target Start/End: Complemental strand, 43738724 - 43738612
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt-atttttg 788  Q
    ||||||| |||||||| ||| ||||||||||||||||||||||| ||||||||| | ||||| ||     | |||||||||| ||||||||| |||||||    
T  43738724 aaaaattaatattttatattcatttaattaatgatgtatatgatttttattataaatcacatatatcatctaatgaatgaatttaaaatgttaatttttg 43738625  T
Q  789 cttataattgtga 801  Q
    |||||||| ||||    
T  43738624 cttataatagtga 43738612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 686 - 752
Target Start/End: Original strand, 1597202 - 1597268
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    |||||||| ||||| || |||||| ||||||| |||||||||||||||||||||||||||| |||||    
T  1597202 ttataaacgaaaatatacattttaaatttattcaattaatgatgtatatgatctttattatcgacca 1597268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 686 - 796
Target Start/End: Original strand, 3549792 - 3549907
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat---tta-atgatgaatgaatctaaaatgtt 781  Q
    |||||| ||||||| || |||||||||| ||| |||||||||| |||| | |||||||||||||||||||   |||  | |||||||||| |||||||||    
T  3549792 ttataagcaaaaatctacattttagattcattcaattaatgatatatacggtctttattatagaccacatacattatttaatgaatgaatttaaaatgtt 3549891  T
Q  782 -atttttgcttataat 796  Q
     |||||||||||||||    
T  3549892 aatttttgcttataat 3549907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 681 - 758
Target Start/End: Complemental strand, 10832126 - 10832049
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta 758  Q
    |||| |||||||||||||| || ||||||| || ||| |||||||| | ||||||||||||||||||||| |||||||    
T  10832126 cactattataaacaaaaatctacattttaggttcattcaattaatggtatatatgatctttattatagacaacattta 10832049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 686 - 755
Target Start/End: Original strand, 44349943 - 44350012
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||||| ||||||||||||||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  44349943 ttataaacaaaagtttatattttagattcattcatttaatgatgcacatggtctttattatagaccacat 44350012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 687 - 747
Target Start/End: Complemental strand, 21321444 - 21321384
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||||| |||||| ||| |||||||| |||||||||||||||||||||| |||||||||||    
T  21321444 tataaataaaaatatattttttagatatatttaattaatgatgtatatggtctttattata 21321384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 711 - 755
Target Start/End: Original strand, 39362847 - 39362891
Alignment:
Q  711 atttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  39362847 atttattcaattaatgatgtatatgatctttattatagaccacat 39362891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 686 - 750
Target Start/End: Original strand, 42761466 - 42761530
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac 750  Q
    |||||| ||||| |||| |||||||||| ||| |||||||||||||| |||||||||||||||||    
T  42761466 ttataagcaaaactttacattttagattcattcaattaatgatgtatctgatctttattatagac 42761530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 681 - 811
Target Start/End: Original strand, 3013618 - 3013753
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacatttaa----tgatgaatgaatctaaa 776  Q
    |||| |||||| |||||| |||||||||||||||||| |||||||| ||||| || ||||||||||| |  | ||  |     | |||||||||| ||||    
T  3013618 cactattataagcaaaaaattatattttagatttattcaattaatgttgtatgtggtctttattataaataatatacatcatttaatgaatgaatgtaaa 3013717  T
Q  777 atgtta-tttttgcttataattgtgagcggagggtg 811  Q
    |||||| |||||||||||||| |||| |||||||||    
T  3013718 atgttaatttttgcttataatagtgaccggagggtg 3013753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 6508405 - 6508479
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| |||||||||| || ||||||| ||| | ||||||||| | |||||||||||||||||||||||    
T  6508405 cactattataagcaaaaatttacatcttagattcattcatttaatgatgcacatgatctttattatagaccacat 6508479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 8338683 - 8338757
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||||| || |||||||||| ||| | ||||||||| | |||||||||||||||||||||||    
T  8338683 cactattataagcaaaaatctacattttagattcattcatttaatgatgcacatgatctttattatagaccacat 8338757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 703 - 813
Target Start/End: Complemental strand, 9590854 - 9590739
Alignment:
Q  703 tattttagatttatttaattaatgatgtatatgatctttattatagaccacatttaatg----atgaatgaatctaaaatg-ttatttttgcttataatt 797  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||||| |||||||  | ||    ||||||||||||||||||   | |||||||||||||     
T  9590854 tattttaaattcattcaattaatgatgtatatgatctttattatataccacatacattgtttaatgaatgaatctaaaatgcaaaattttgcttataata 9590755  T
Q  798 gtgagcggagggtgta 813  Q
    |||| ||||| |||||    
T  9590754 gtgatcggagagtgta 9590739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 31998321 - 31998247
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||| |||  |||||||||| ||| | ||||||||||||||||||||||||||||| |||||    
T  31998321 cactattataagcaaaactttgcattttagattcattcatttaatgatgtatatgatctttattatagatcacat 31998247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 686 - 755
Target Start/End: Complemental strand, 2492603 - 2492534
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| ||||| |||| |||||||||  ||| ||| ||||||||||||||||||||||||| |||||||    
T  2492603 ttataagcaaaagtttacattttagatccattcaataaatgatgtatatgatctttattataaaccacat 2492534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 681 - 742
Target Start/End: Original strand, 17342355 - 17342416
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatcttta 742  Q
    ||||||||||| |||||||||| |||||| ||||||||| |||||||||||  |||||||||    
T  17342355 cactgttataagcaaaaatttacattttacatttatttacttaatgatgtacgtgatcttta 17342416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 762 - 814
Target Start/End: Complemental strand, 23398466 - 23398413
Alignment:
Q  762 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgtac 814  Q
    ||||||||||||||||||||| |||||||||||||| |||| ||||||||||||    
T  23398466 atgaatgaatctaaaatgttagtttttgcttataatagtgaccggagggtgtac 23398413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 687 - 747
Target Start/End: Complemental strand, 2353021 - 2352961
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    ||||| ||||||||||| ||||||||  |||||||||||||||||| || |||||||||||    
T  2353021 tataagcaaaaatttattttttagatacatttaattaatgatgtatgtgctctttattata 2352961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 703 - 755
Target Start/End: Original strand, 8465956 - 8466008
Alignment:
Q  703 tattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||||| ||||| |||||||||||| || |||||||||||||||||||    
T  8465956 tattttagattcatttatttaatgatgtatgtggtctttattatagaccacat 8466008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 687 - 755
Target Start/End: Complemental strand, 11324559 - 11324491
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| ||||||| | |||||| ||| ||| ||||||||||||||||| |||||||||||||| ||||    
T  11324559 tataaataaaaattaacattttaaattcattcaattaatgatgtatatggtctttattatagactacat 11324491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 687 - 755
Target Start/End: Complemental strand, 11482580 - 11482512
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| ||||||| | |||||| ||| ||| ||||||||||||||||| |||||||||||||| ||||    
T  11482580 tataaataaaaattaacattttaaattcattcaattaatgatgtatatggtctttattatagactacat 11482512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 693 - 733
Target Start/End: Original strand, 13043371 - 13043411
Alignment:
Q  693 caaaaatttatattttagatttatttaattaatgatgtata 733  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  13043371 caaaaattaatattttagatttatttaattaatgatgtata 13043411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 681 - 749
Target Start/End: Original strand, 26344228 - 26344296
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattataga 749  Q
    |||| ||||||  |||||| ||||||||| ||||||||||||||| ||||||||  |||||||||||||    
T  26344228 cactattataagaaaaaatatatattttaaatttatttaattaataatgtatatagtctttattataga 26344296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 719 - 755
Target Start/End: Original strand, 45639555 - 45639591
Alignment:
Q  719 aattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||||||||||||||||||||||||||||||    
T  45639555 aattaatgatgtatatgatctttattatagaccacat 45639591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 694 - 814
Target Start/End: Complemental strand, 23575437 - 23575311
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat------ttaatgatgaatgaatctaaaatgt--tattt 785  Q
    ||||| ||| ||||||| || ||| | ||||||||| |||||||||||||||||||||||||      ||||  ||||||||| |||||||||  | |||    
T  23575437 aaaaaattacattttaggttcattcatttaatgatgcatatgatctttattatagaccacatacatcattaa--atgaatgaacctaaaatgtagttttt 23575340  T
Q  786 ttgcttataattgtgagcggagggtgtac 814  Q
    ||||||||| | |||| ||||||||||||    
T  23575339 ttgcttatattagtgaccggagggtgtac 23575311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 704 - 755
Target Start/End: Complemental strand, 26674295 - 26674244
Alignment:
Q  704 attttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| ||| ||| ||||||||||||||||| |||||||||||||||||||    
T  26674295 attttaaattcattcaattaatgatgtatatggtctttattatagaccacat 26674244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 702 - 749
Target Start/End: Original strand, 40988391 - 40988438
Alignment:
Q  702 atattttagatttatttaattaatgatgtatatgatctttattataga 749  Q
    |||||||| | ||||| |||||||||||||||||||||||||||||||    
T  40988391 atattttacaattattcaattaatgatgtatatgatctttattataga 40988438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 687 - 813
Target Start/End: Original strand, 41161479 - 41161610
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat------ttaatgatgaatgaatctaaaatgt 780  Q
    |||||||||||| ||| ||||||  || ||| | ||||||||| | |||||||||||||||||||||||      ||||  |||||||||  ||||||||    
T  41161479 tataaacaaaaaattacattttaagttcattcatttaatgatgcacatgatctttattatagaccacatacatcattaa--atgaatgaacttaaaatgt 41161576  T
Q  781 ta-tttttgcttataattgtgagcggagggtgta 813  Q
    || |||||||||||| | |||| |||||||||||    
T  41161577 tattttttgcttatattagtgaccggagggtgta 41161610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 694 - 745
Target Start/End: Complemental strand, 50755296 - 50755245
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttatta 745  Q
    |||||| || ||||||| || |||||||||||||||||||||||||||||||    
T  50755296 aaaaatctacattttaggttcatttaattaatgatgtatatgatctttatta 50755245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 33939429 - 33939355
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||| |||| |||||||||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  33939429 cactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacat 33939355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 45115302 - 45115228
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||||| || |||||||||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  45115302 cactattataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattatagaccacat 45115228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 694 - 755
Target Start/End: Complemental strand, 7461387 - 7461326
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| ||| ||||||||||| ||||||||||||||||| ||  ||||||||||| |||||||    
T  7461387 aaaactttgtattttagattcatttaattaatgatgtacattgtctttattatacaccacat 7461326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 687 - 752
Target Start/End: Original strand, 36486553 - 36486618
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    ||||| |||||||||| |||||||||| |||| || |||||||||||  |||||||||||| ||||    
T  36486553 tataagcaaaaatttagattttagattcatttgatcaatgatgtatacaatctttattataaacca 36486618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 686 - 743
Target Start/End: Complemental strand, 41970915 - 41970858
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttat 743  Q
    ||||||| ||||||  |||||||||||||||| |||| ||||||||||||| ||||||    
T  41970915 ttataaagaaaaataaatattttagatttattcaattgatgatgtatatgacctttat 41970858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 681 - 810
Target Start/End: Original strand, 50550127 - 50550261
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 776  Q
    |||| ||||||| ||||||  | ||| || ||| ||| ||||||| ||||||||||||||||||||||| |||||  |     | |||||||||||||||    
T  50550127 cactattataaataaaaatcaacattataaattcattcaattaataatgtatatgatctttattatagatcacatacatcatttaatgaatgaatctaaa 50550226  T
Q  777 atgtt-atttttgcttataattgtgagcggagggt 810  Q
    ||||| ||||||  ||||||| |||| ||||||||    
T  50550227 atgttgatttttctttataatagtgatcggagggt 50550261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 695 - 755
Target Start/End: Original strand, 37248146 - 37248206
Alignment:
Q  695 aaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||| ||||| ||||||||||||||| || |||||||||| || |||| |||||||    
T  37248146 aaaatttattttttaaatttatttaattaataatatatatgatctataatataaaccacat 37248206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 762 - 813
Target Start/End: Original strand, 45115263 - 45115315
Alignment:
Q  762 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgta 813  Q
    |||||||||||||||||||  ||||||||||||||| |||| |||||||||||    
T  45115263 atgaatgaatctaaaatgtagatttttgcttataatagtgaccggagggtgta 45115315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 681 - 732
Target Start/End: Complemental strand, 3906893 - 3906842
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtat 732  Q
    |||| |||||||||||||||||| ||||||||| ||||||| |||| |||||    
T  3906893 cactattataaacaaaaatttattttttagattcatttaataaatggtgtat 3906842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 694 - 801
Target Start/End: Complemental strand, 5595539 - 5595427
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat---ttaatgatgaatgaatctaaaatgtt--atttttg 788  Q
    |||||| || |||||||||| ||| ||||| | || |||||| ||||||||||| | |||||   ||| | ||||||||||||||||||||  | |||||    
T  5595539 aaaaatctacattttagattcattcaattagtaatatatatggtctttattatatatcacatacattattaatgaatgaatctaaaatgttagaattttg 5595440  T
Q  789 cttataattgtga 801  Q
    |||||||| ||||    
T  5595439 cttataatagtga 5595427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 681 - 740
Target Start/End: Complemental strand, 13043472 - 13043413
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctt 740  Q
    |||| ||||||  ||||||| |||||||||||| ||| |||||||||||||||| |||||    
T  13043472 cactattataagtaaaaattaatattttagattcattcaattaatgatgtatataatctt 13043413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 762 - 808
Target Start/End: Original strand, 24981934 - 24981981
Alignment:
Q  762 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagg 808  Q
    |||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  24981934 atgaatgaatctaaaatgttgatttttgcttataatagtgaccggagg 24981981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 681 - 752
Target Start/End: Original strand, 45010846 - 45010917
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    |||| |||||| ||||| |||  |||||| ||| ||| ||||||||||||||||||| ||||||||| ||||    
T  45010846 cactattataagcaaaattttgcattttaaattcattcaattaatgatgtatatgatatttattataaacca 45010917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 755
Target Start/End: Original strand, 50154337 - 50154388
Alignment:
Q  704 attttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||| ||||||||||| |||||||||||  |||||||||| |||||    
T  50154337 attttagattcatttaattaataatgtatatgattattattatagatcacat 50154388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 705 - 755
Target Start/End: Complemental strand, 9002837 - 9002787
Alignment:
Q  705 ttttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||| ||||||| |||||||||| ||||||||||| ||||| ||||    
T  9002837 ttttagattcatttaataaatgatgtatgtgatctttattgtagacaacat 9002787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 747
Target Start/End: Complemental strand, 13877117 - 13877051
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||| ||||||  |||| |||| |||||||||||||| |||  || |||||||||||||||||||||    
T  13877117 cactcttataagtaaaattttacattttagatttattcaatctataatgtatatgatctttattata 13877051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 14967357 - 14967283
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| |||||||  | |||||||||| ||| | | |||||||||| ||||||||||||||| ||||||    
T  14967357 cactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtgatctttattataggccacat 14967283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 747
Target Start/End: Complemental strand, 18607217 - 18607151
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||| |||||||||||||| ||||||||| ||| ||| ||||||| || ||||| || |||||||||    
T  18607217 cactattataaacaaaaatctatattttaaattcattcaattaataatatatataatttttattata 18607151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 747
Target Start/End: Original strand, 25547479 - 25547545
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||| |||||| ||||| || | |||||||||| ||||||| ||||||||||||| |||||| ||||    
T  25547479 cactattataatcaaaatttgacattttagattcatttaataaatgatgtatatggtctttaatata 25547545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 701 - 755
Target Start/End: Original strand, 31325838 - 31325892
Alignment:
Q  701 tatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||||||||||| ||||||| |||||| || |||||||| ||||| ||||    
T  31325838 tatattttagatttattcaattaataatgtatgtgttctttattgtagacaacat 31325892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 686 - 728
Target Start/End: Original strand, 44673899 - 44673941
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgat 728  Q
    |||||||||||||||||| |||||| |||||||||| ||||||    
T  44673899 ttataaacaaaaatttattttttaggtttatttaataaatgat 44673941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 681 - 750
Target Start/End: Original strand, 6758554 - 6758623
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac 750  Q
    |||| |||||| ||||| |||  |||||| ||| ||| ||||||||||||||||  ||||||||||||||    
T  6758554 cactattataagcaaaactttgcattttacattcattcaattaatgatgtatatagtctttattatagac 6758623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 762 - 810
Target Start/End: Complemental strand, 8338722 - 8338673
Alignment:
Q  762 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggt 810  Q
    |||||||||||||||||||  ||||||||||||||| |||| ||||||||    
T  8338722 atgaatgaatctaaaatgtagatttttgcttataatagtgaccggagggt 8338673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 686 - 755
Target Start/End: Complemental strand, 8466053 - 8465984
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||||| |||  |||||||||| ||||| |||||||||||| || ||| || || |||||||||    
T  8466053 ttataaacaaaactttgcattttagattcatttatttaatgatgtatgtggtctataataaagaccacat 8465984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 693 - 734
Target Start/End: Original strand, 13048677 - 13048718
Alignment:
Q  693 caaaaatttatattttagatttatttaattaatgatgtatat 734  Q
    |||||||| |||||||||||| ||| ||||||||||||||||    
T  13048677 caaaaattaatattttagattcattcaattaatgatgtatat 13048718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 693 - 734
Target Start/End: Original strand, 13053674 - 13053715
Alignment:
Q  693 caaaaatttatattttagatttatttaattaatgatgtatat 734  Q
    |||||||| |||||||||||| ||| ||||||||||||||||    
T  13053674 caaaaattaatattttagattcattcaattaatgatgtatat 13053715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 687 - 760
Target Start/End: Original strand, 21444218 - 21444291
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacatttaat 760  Q
    ||||| |||||||  |||||||||||| ||||||| ||| || ||| || |||||||||||||| |||| ||||    
T  21444218 tataagcaaaaatacatattttagattcatttaataaataatatatgtggtctttattatagacaacatataat 21444291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 687 - 752
Target Start/End: Original strand, 24115765 - 24115830
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    ||||| ||||||  || ||||||| |||||| | ||||||||| | ||||||||||||||||||||    
T  24115765 tataagcaaaaaactacattttaggtttattcatttaatgatgcacatgatctttattatagacca 24115830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 686 - 755
Target Start/End: Original strand, 31699000 - 31699069
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| ||||||| || ||| |||||| ||| | ||||||||| | ||||||||||||||||| |||||    
T  31699000 ttataagcaaaaatatacattgtagattcattcatttaatgatgcacatgatctttattatagagcacat 31699069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 686 - 755
Target Start/End: Complemental strand, 31889170 - 31889101
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| ||||||||||  ||||| ||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  31889170 ttataagcaaaaatttactttttacattcattcatttaatgatgcacatggtctttattatagaccacat 31889101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 694 - 755
Target Start/End: Complemental strand, 35544652 - 35544591
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||||||||| ||||||| | | |||| ||||| || |||| ||||||||||||||    
T  35544652 aaaaatttatattttaaatttattcattaaatggtgtatgtggtcttcattatagaccacat 35544591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 681 - 734
Target Start/End: Original strand, 38834619 - 38834672
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatat 734  Q
    |||| |||||| ||||||||||| ||||||||| ||| ||| ||||||||||||    
T  38834619 cactattataagcaaaaatttattttttagattcattaaataaatgatgtatat 38834672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 705 - 758
Target Start/End: Original strand, 39617340 - 39617393
Alignment:
Q  705 ttttagatttatttaattaatgatgtatatgatctttattatagaccacattta 758  Q
    ||||||||||||| ||| | |||||||| ||||| ||| |||||||||||||||    
T  39617340 ttttagatttattgaatgagtgatgtatgtgatcattaatatagaccacattta 39617393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 681 - 734
Target Start/End: Original strand, 39708187 - 39708240
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatat 734  Q
    |||||||||||| ||||| ||||||||||||||  || |||||||||| |||||    
T  39708187 cactgttataaaaaaaaaattatattttagattagttcaattaatgatatatat 39708240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 1e-25; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 681 - 813
Target Start/End: Complemental strand, 14772678 - 14772543
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacatttaa--tgatgaatgaatctaaaat 778  Q
    |||| |||||| ||||| ||||||||||||||| ||| ||||||||||||||||  ||||||||||||||||||  | |  | ||||||||| |||||||    
T  14772678 cactattataagcaaaactttatattttagattaattcaattaatgatgtatatagtctttattatagaccacacatcatttaatgaatgaacctaaaat 14772579  T
Q  779 gtt-atttttgcttataattgtgagcggagggtgta 813  Q
    ||| ||||||||||||||| |||| |||||||||||    
T  14772578 gttgatttttgcttataatagtgaccggagggtgta 14772543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 681 - 813
Target Start/End: Original strand, 71267 - 71406
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta---atgatgaatgaatc---ta 774  Q
    |||| |||||| ||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||  |    | |||||||||||   ||    
T  71267 cactattataagcaaaaatctatattttagattcattcaattaatgatgtatatgatctttattatagaccacatacacatttaatgaatgaatctaata 71366  T
Q  775 aaatgtt-atttttgcttataattgtgagcggagggtgta 813  Q
    ||||||| ||||||||||||||| |||| |||||||||||    
T  71367 aaatgttgatttttgcttataatagtgatcggagggtgta 71406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 686 - 755
Target Start/End: Complemental strand, 43482899 - 43482830
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||||||||||| |||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  43482899 ttataaacaaaaatttacattttatatttattcatttaatgatgtatatgatctttattatagaccacat 43482830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 694214 - 694288
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||||||||||| || |||||| ||||||| ||||||| |||||||||||||||||||||||||||||    
T  694214 cactattataaacaaaaatataaattttaaatttattcaattaattatgtatatgatctttattatagaccacat 694288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 695 - 801
Target Start/End: Complemental strand, 3100523 - 3100412
Alignment:
Q  695 aaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat---ttaatga-tgaatgaatctaaaatgtt-atttttgc 789  Q
    |||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| ||||   | | | | ||||||||||||||||||| ||||||||    
T  3100523 aaaatttacattttagattcattcaattaatgatgtatatgatctttattatagactacatacatcatttattgaatgaatctaaaatgttaatttttgc 3100424  T
Q  790 ttataattgtga 801  Q
    ||||||| ||||    
T  3100423 ttataatagtga 3100412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 694 - 755
Target Start/End: Complemental strand, 38370506 - 38370445
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  38370506 aaaactttgtattttatatttatttaattaatgatgtatatgatctttattatagactacat 38370445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 699 - 755
Target Start/End: Complemental strand, 22650970 - 22650914
Alignment:
Q  699 tttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  22650970 tttacattttagatttatttatttaatgatgtatatggtctttattatagaccacat 22650914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 18033487 - 18033413
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||||| || |||||||||||||| | ||||||||||| ||| |||||||||||||||||||    
T  18033487 cactattataagcaaaaatctacattttagatttattcatttaatgatgtacatggtctttattatagaccacat 18033413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 687 - 755
Target Start/End: Original strand, 11795750 - 11795818
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||| |||||||  | |||||||||| ||| ||||||||||||||||| |||||||||||||||||||    
T  11795750 tataagcaaaaatcaacattttagattcattcaattaatgatgtatatggtctttattatagaccacat 11795818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 687 - 755
Target Start/End: Original strand, 33075079 - 33075147
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||| ||||| ||||||||||||||| ||| ||||||| | |||||||||||||| ||||||||||||    
T  33075079 tataagcaaaactttatattttagattcattcaattaataacgtatatgatctttactatagaccacat 33075147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 686 - 753
Target Start/End: Complemental strand, 5984110 - 5984043
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccac 753  Q
    |||||| ||||| |||  |||||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  5984110 ttataagcaaaactttgcattttagattcattcaattaatgatgtatatggtctttattatagaccac 5984043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 681 - 813
Target Start/End: Original strand, 10437646 - 10437782
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacatt--taatg--atgaatgaatctaaa 776  Q
    |||| ||||||  |||| ||| ||||||| ||| ||| ||||| ||||||||||||| |||||||||||| ||||   ||||   || ||||||||||||    
T  10437646 cactattataagtaaaactttgtattttaaattcattcaattagtgatgtatatgat-tttattatagactacatacataatttaataaatgaatctaaa 10437744  T
Q  777 atgtt-atttttgcttataattgtgagcggagggtgta 813  Q
    ||||| ||||||||||||||| |||| |||||||||||    
T  10437745 atgttgatttttgcttataatagtgaccggagggtgta 10437782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 687 - 749
Target Start/End: Complemental strand, 25773369 - 25773307
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattataga 749  Q
    |||||||||||||||| |||||| ||| | | ||||||||||||||||| |||||||||||||    
T  25773369 tataaacaaaaatttacattttacattcaatcaattaatgatgtatatggtctttattataga 25773307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 694 - 747
Target Start/End: Complemental strand, 780777 - 780724
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||||| ||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  780777 aaaaatatatattttaaattcattcaattaatgatgtatatgatctttattata 780724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 687 - 813
Target Start/End: Complemental strand, 25408669 - 25408538
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat---ttaatga-tgaatgaatctaaaatgt-t 781  Q
    ||||| ||||||||||| ||||||||| ||| ||| |||||||||| || |||||||| ||||| ||||   | | | | |||||||||||||||| |      
T  25408669 tataagcaaaaatttatgttttagattcattcaataaatgatgtatgtggtctttattgtagacaacatacatcatttattgaatgaatctaaaatatga 25408570  T
Q  782 atttttgcttataattgtgagcggagggtgta 813  Q
    ||||||||||||| |||||| |||||||||||    
T  25408569 atttttgcttatatttgtgaccggagggtgta 25408538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 686 - 747
Target Start/End: Complemental strand, 30371460 - 30371399
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||||| |||||| |||||||||||||| |||||||||||  |||||||| |||||||||||    
T  30371460 ttataagcaaaaaattatattttagattcatttaattaatattgtatatggtctttattata 30371399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 694 - 755
Target Start/End: Complemental strand, 31706078 - 31706017
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||| |||||| ||| ||||||||||| |||||||| || |||||||||||||||||    
T  31706078 aaaaatttacattttaaattcatttaattaataatgtatataatttttattatagaccacat 31706017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 686 - 755
Target Start/End: Complemental strand, 35032397 - 35032328
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| |||||||||| |||||||||| ||| ||||||| ||||||||||| ||| |||||||| ||||    
T  35032397 ttataagcaaaaatttacattttagattcattcaattaattatgtatatgatttttgttatagactacat 35032328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 684 - 813
Target Start/End: Original strand, 8681696 - 8681830
Alignment:
Q  684 tgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat---tta-atgatgaatgaatctaaaatg 779  Q
    |||||||| ||||| |||| |||||| ||| ||||||||||||||| ||||  |||||||| ||||||||||   |||  |||||||||||| ||||| |    
T  8681696 tgttataagcaaaactttaaattttaaattcatttaattaatgatgaatattgtctttattgtagaccacatacattatttgatgaatgaatttaaaacg 8681795  T
Q  780 tt-atttttgcttataattgtgagcggagggtgta 813  Q
    || | |||||| |||||| |||| ||||| |||||    
T  8681796 ttgagttttgcctataatagtgatcggagagtgta 8681830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 665 - 755
Target Start/End: Complemental strand, 31691405 - 31691317
Alignment:
Q  665 atacacactctgatcacactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||| ||||||  | ||||||  |||||||||||||| ||||| ||| ||||||||||||||||  | ||||||| |||||||||    
T  31691405 atacacactccgatcac--tattataagtaaaaatttatatttgagattcattcaattaatgatgtatatattatttattacagaccacat 31691317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 735
Target Start/End: Complemental strand, 4082870 - 4082816
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatg 735  Q
    |||| ||||||||||||||| | |||||||||||||| ||| |||||||||||||    
T  4082870 cactattataaacaaaaattcacattttagatttattcaataaatgatgtatatg 4082816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 14153377 - 14153451
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||||| ||  ||||| ||| ||| | ||||||||| |||||||||||||||||||||||||    
T  14153377 cactattataagcaaaaatctactttttatattcattcatttaatgatgcatatgatctttattatagaccacat 14153451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 17967447 - 17967373
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| ||||||||||||||| |||||||| ||| ||| ||| |||||||||| || |||||| ||||||| ||||    
T  17967447 cactattataaacaaaaattgatattttatattcattcaataaatgatgtatgtggtctttaatatagacaacat 17967373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 26141763 - 26141837
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||| |||| |||||||||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  26141763 cactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacat 26141837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 681 - 734
Target Start/End: Complemental strand, 32398135 - 32398082
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatat 734  Q
    |||| |||||||||||||| ||||||||| ||| ||| ||||||||||||||||    
T  32398135 cactattataaacaaaaatctatattttaaattcattcaattaatgatgtatat 32398082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 681 - 750
Target Start/End: Original strand, 36895045 - 36895114
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac 750  Q
    |||| |||||||||||| | || |||||| |||||||||||||||||| ||| || |||||| |||||||    
T  36895045 cactattataaacaaaattctacattttaaatttatttaattaatgatatatgtggtctttactatagac 36895114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 762 - 813
Target Start/End: Complemental strand, 43117433 - 43117381
Alignment:
Q  762 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgta 813  Q
    ||||||||||||||||| || ||||||||||||||| |||| |||||||||||    
T  43117433 atgaatgaatctaaaatattgatttttgcttataatagtgatcggagggtgta 43117381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 763 - 813
Target Start/End: Original strand, 15549419 - 15549470
Alignment:
Q  763 tgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgta 813  Q
    ||||||||||||||||||| ||||||| ||||||| |||| |||||||||||    
T  15549419 tgaatgaatctaaaatgttgatttttgtttataatagtgaccggagggtgta 15549470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 692 - 747
Target Start/End: Original strand, 17153442 - 17153497
Alignment:
Q  692 acaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||||||| || | |||||||| ||| |||||||||||| ||||||||||||||||    
T  17153442 acaaaaatgtacaatttagattcattcaattaatgatgtgtatgatctttattata 17153497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 681 - 724
Target Start/End: Complemental strand, 29177843 - 29177800
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaa 724  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  29177843 cactgttataaacaaaaatttacattttagattcattcaattaa 29177800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 686 - 741
Target Start/End: Complemental strand, 37067892 - 37067837
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatcttt 741  Q
    |||||| ||||||| || |||||||||| | ||||||||||||||||||| |||||    
T  37067892 ttataagcaaaaatctacattttagattcaattaattaatgatgtatatggtcttt 37067837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 705 - 747
Target Start/End: Original strand, 13157365 - 13157407
Alignment:
Q  705 ttttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||||||| |||| ||||||||||||||||| |||||||||||    
T  13157365 ttttagatatattcaattaatgatgtatatggtctttattata 13157407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 705 - 755
Target Start/End: Original strand, 35969073 - 35969123
Alignment:
Q  705 ttttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||| |||||||||||||||||| || ||| ||||||| |||||||    
T  35969073 ttttagattcatttaattaatgatgtatgtggtctatattataaaccacat 35969123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 711 - 752
Target Start/End: Original strand, 10463006 - 10463047
Alignment:
Q  711 atttatttaattaatgatgtatatgatctttattatagacca 752  Q
    ||||||| || |||||||||||||||| ||||||||||||||    
T  10463006 atttattcaaataatgatgtatatgatttttattatagacca 10463047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 681 - 753
Target Start/End: Complemental strand, 19869055 - 19868982
Alignment:
Q  681 cactgttataa-acaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccac 753  Q
    ||||||||||| | |||||||||| ||||||||||||| | ||||||||| | ||||| ||| ||||| |||||    
T  19869055 cactgttataagaaaaaaatttatgttttagatttattcatttaatgatgcacatgatttttgttataaaccac 19868982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 686 - 727
Target Start/End: Original strand, 26045278 - 26045319
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatga 727  Q
    |||||| ||||||||||||||||||||| ||| |||||||||    
T  26045278 ttataagcaaaaatttatattttagattcattcaattaatga 26045319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 684 - 717
Target Start/End: Complemental strand, 26432617 - 26432584
Alignment:
Q  684 tgttataaacaaaaatttatattttagatttatt 717  Q
    |||||||| |||||||||||||||||||||||||    
T  26432617 tgttataatcaaaaatttatattttagatttatt 26432584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 686 - 755
Target Start/End: Original strand, 31154688 - 31154757
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||| |||||||||  ||||||||||||| |||||||||| |||||  | |||| |||||| |||||    
T  31154688 ttataaataaaaatttaccttttagatttattcaattaatgatctatatagtatttagtatagatcacat 31154757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 687 - 728
Target Start/End: Complemental strand, 33652535 - 33652494
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgat 728  Q
    ||||| |||||||| |||||||||||||||||||| ||||||    
T  33652535 tataagcaaaaattaatattttagatttatttaataaatgat 33652494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 33652698 - 33652620
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttattt----aattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| ||||||| |||||| ||||||||| ||||||||    |||| ||||||||| |||||| ||||||| |||||||    
T  33652698 cactattataaataaaaatatatattttaaatttatttaataaattgatgatgtatgtgatctatattataaaccacat 33652620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 694 - 755
Target Start/End: Complemental strand, 41005787 - 41005726
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||||||||| ||| ||| ||||||||| ||||||| || ||| ||||||| ||||    
T  41005787 aaaaatttatattttaaattcattaaattaatgaggtatatggtcgttagtatagactacat 41005726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 1e-25; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 681 - 801
Target Start/End: Original strand, 1961317 - 1961442
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 776  Q
    |||| |||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||  |     | |||||||||||||||    
T  1961317 cactattataagcaaaaatttacattttagatttgtttaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgaatctaaa 1961416  T
Q  777 atgtt-atttttgcttataattgtga 801  Q
    ||||| ||||||||||||||| ||||    
T  1961417 atgttgatttttgcttataatagtga 1961442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 681 - 813
Target Start/End: Complemental strand, 15119909 - 15119772
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 776  Q
    |||| |||||| ||||||| || |||||||||||||| | ||||||||||||||  |||||||||||||||||||  |     | |||||||||||||||    
T  15119909 cactattataagcaaaaatctacattttagatttattcatttaatgatgtatattgtctttattatagaccacatacatcatttaatgaatgaatctaaa 15119810  T
Q  777 atgtt-atttttgcttataattgtgagcggagggtgta 813  Q
    ||||| ||||||||||||||| |||| || ||||||||    
T  15119809 atgttaatttttgcttataatagtgaccgaagggtgta 15119772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 681 - 808
Target Start/End: Complemental strand, 7079502 - 7079370
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 776  Q
    |||| |||||| ||||||  ||||||||||||| ||||||||||||||||||||| |||| |||||||||||||| ||     | ||| |||||| ||||    
T  7079502 cactattataagcaaaaacatatattttagattcatttaattaatgatgtatatggtcttaattatagaccacatatatcatttaatggatgaatttaaa 7079403  T
Q  777 atgtt-atttttgcttataattgtgagcggagg 808  Q
    ||||| ||||||||||||||| |||| ||||||    
T  7079402 atgttgatttttgcttataatagtgatcggagg 7079370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 2050098 - 2050172
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  2050098 cactattataagcaaaactttttattttagatttatttatttaatgatgtatatgatctttattataaaccacat 2050172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 686 - 755
Target Start/End: Original strand, 10996259 - 10996328
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| ||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||||||||||||    
T  10996259 ttataagcaaaaatttatattttaaattcattgaattaatgatgtatatggtctttattatagaccacat 10996328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 681 - 813
Target Start/End: Complemental strand, 26003567 - 26003430
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 776  Q
    |||| |||||| ||||||| || |||||||||| ||| ||||||||||||||||| ||||||||||| || ||||  |     | ||||||||| |||||    
T  26003567 cacttttataagcaaaaatctacattttagattcattcaattaatgatgtatatggtctttattatatactacatacatcatttaatgaatgaacctaaa 26003468  T
Q  777 atgtt-atttttgcttataattgtgagcggagggtgta 813  Q
    || || |||||||||||||||||||| |||||||||||    
T  26003467 atattgatttttgcttataattgtgaccggagggtgta 26003430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 693 - 813
Target Start/End: Complemental strand, 38465909 - 38465784
Alignment:
Q  693 caaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt-attttt 787  Q
    ||||||| || |||||||||| ||| ||||||||||||||||| |||||||||| ||||||||  |     | |||||| ||||||||||||| ||||||    
T  38465909 caaaaatctacattttagattcattcaattaatgatgtatatggtctttattatggaccacatacatcatttaatgaattaatctaaaatgttgattttt 38465810  T
Q  788 gcttataattgtgagcggagggtgta 813  Q
    ||||||||| |||| |||||||||||    
T  38465809 gcttataatagtgaccggagggtgta 38465784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 686 - 755
Target Start/End: Complemental strand, 15859678 - 15859609
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| ||||||| ||||||||||||| ||| ||||||||||||||||||| |||||||||||| ||||    
T  15859678 ttataagcaaaaatctatattttagattcattcaattaatgatgtatatgatatttattatagacaacat 15859609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 681 - 745
Target Start/End: Complemental strand, 11342102 - 11342038
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttatta 745  Q
    |||| |||||| ||||||| ||||||||||||| ||||||||||||||||||||||| |||||||    
T  11342102 cactattataagcaaaaatctatattttagattcatttaattaatgatgtatatgatttttatta 11342038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 763 - 815
Target Start/End: Complemental strand, 11726541 - 11726489
Alignment:
Q  763 tgaatgaatctaaaatgttatttttgcttataattgtgagcggagggtgtaca 815  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  11726541 tgaatgaatctaaaatgttatttttgcttataatagtgaccggagggtgtaca 11726489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 686 - 749
Target Start/End: Original strand, 596040 - 596103
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattataga 749  Q
    ||||||||||||||| |||||||||||| || | ||||||||||||||| ||||||||||||||    
T  596040 ttataaacaaaaattaatattttagattcatcttattaatgatgtatataatctttattataga 596103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 693 - 796
Target Start/End: Complemental strand, 15916852 - 15916745
Alignment:
Q  693 caaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat---tta-atgatgaatgaatctaaaatgtt-attttt 787  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||||| |||||||| ||||   |||  | ||||||||||||||||| || ||||||    
T  15916852 caaaaattt-tattatagatttattcaattaatgatgtatatgatctttgttatagactacatacattatttaatgaatgaatctaaaatattgattttt 15916754  T
Q  788 gcttataat 796  Q
    |||||||||    
T  15916753 gcttataat 15916745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 686 - 755
Target Start/End: Original strand, 32630419 - 32630488
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||||||| || ||||| |||| ||| ||||||||||||||||| |||||||||||||| ||||    
T  32630419 ttataaacaaaaatctacattttggattcattcaattaatgatgtatatggtctttattatagactacat 32630488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 762 - 814
Target Start/End: Original strand, 13994283 - 13994335
Alignment:
Q  762 atgaatgaatctaaaatgttatttttgcttataattgtgagcggagggtgtac 814  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  13994283 atgaatgaatctaaaatgttagttttgcttataatagtgaccggagggtgtac 13994335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 687 - 755
Target Start/End: Original strand, 37195066 - 37195134
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||| ||||| || |||||||||||| | | ||||||||||||||||| |||||||||||||||||||    
T  37195066 tataagcaaaagttaatattttagattcactcaattaatgatgtatatggtctttattatagaccacat 37195134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 686 - 749
Target Start/End: Complemental strand, 19951572 - 19951509
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattataga 749  Q
    ||||||||||||||  |||||||| ||| ||| ||||||||||||||||| |||||||||||||    
T  19951572 ttataaacaaaaatcaatattttatattcattcaattaatgatgtatatgctctttattataga 19951509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 32460749 - 32460824
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaatt-aatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| |||||||||| |||||||||| |||| ||| |||||||||||| |||||||||||||| |||||    
T  32460749 cactattataagcaaaaatttacattttagattaattttatttaatgatgtatattatctttattatagaacacat 32460824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 686 - 755
Target Start/End: Original strand, 8383198 - 8383267
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||||||| ||||||||||||| ||| | ||||| ||||| ||| ||||||||||||| |||||    
T  8383198 ttataaacaaaaatctatattttagattcattcatttaataatgtacatggtctttattatagatcacat 8383267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 704 - 813
Target Start/End: Original strand, 23377973 - 23378087
Alignment:
Q  704 attttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt-atttttgcttataattg 798  Q
    |||||||||| ||| |||||||||||||||||||||||||| |||| |||||  |     | || |||||||||||||| || |||||||||||||||      
T  23377973 attttagattcattcaattaatgatgtatatgatctttattgtagatcacatacatcatttaataaatgaatctaaaatattaatttttgcttataataa 23378072  T
Q  799 tgagcggagggtgta 813  Q
    ||| |||||||||||    
T  23378073 tgaccggagggtgta 23378087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 686 - 755
Target Start/End: Original strand, 36547354 - 36547423
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||||||||| | |||||| ||| ||||||| |||||||||| ||||||||| |||||| |||||    
T  36547354 ttataaacaaaaattgacattttaaattcatttaataaatgatgtatgtgatctttaatatagatcacat 36547423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 762 - 814
Target Start/End: Original strand, 13988385 - 13988437
Alignment:
Q  762 atgaatgaatctaaaatgttatttttgcttataattgtgagcggagggtgtac 814  Q
    ||||||||||||||||||||| |||| |||||||| |||| ||||||||||||    
T  13988385 atgaatgaatctaaaatgttagttttacttataatagtgaccggagggtgtac 13988437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 687 - 747
Target Start/End: Original strand, 20504257 - 20504317
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    ||||||||||||| ||  |||||||| |||| |||||||||||||||| ||||||||||||    
T  20504257 tataaacaaaaatctactttttagatatattcaattaatgatgtatataatctttattata 20504317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 681 - 813
Target Start/End: Original strand, 42530500 - 42530637
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac----cacatttaatgatgaatgaatctaaa 776  Q
    |||| ||||||  ||||||||| |||||||||| |||||||||||  |||||| | ||||||||||||||     ||||    | |||||||||| ||||    
T  42530500 cactattataagtaaaaatttacattttagattcatttaattaatattgtatacggtctttattatagacaatatacatcgtttaatgaatgaatgtaaa 42530599  T
Q  777 atgtt-atttttgcttataattgtgagcggagggtgta 813  Q
    ||||| ||||||||||||||| |||| ||||| |||||    
T  42530600 atgttaatttttgcttataatagtgaccggagagtgta 42530637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 681 - 744
Target Start/End: Complemental strand, 15900351 - 15900288
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttatt 744  Q
    |||| ||||||| ||||||| |||||||| ||||||||||| |||||||||| || ||||||||    
T  15900351 cactattataaataaaaattaatattttacatttatttaataaatgatgtatgtggtctttatt 15900288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 340 - 434
Target Start/End: Original strand, 729817 - 729911
Alignment:
Q  340 atcctctatgaagtgaaggattctttacacatgctcatgacacacccttatggaaaccacttgattcaaaagatttttgaagcaaggagaggtat 434  Q
    |||||||  ||||||||||||| ||||||   |||||||||||| | || ||| | | | |||||||||||||||||| |||||||||| |||||    
T  729817 atcctcttagaagtgaaggattatttacatgagctcatgacacatcgttttggcagctatttgattcaaaagatttttcaagcaaggaggggtat 729911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 8740527 - 8740601
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||||| || |||||||||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  8740527 cactattataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattatagaccacat 8740601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 704 - 814
Target Start/End: Original strand, 11726526 - 11726641
Alignment:
Q  704 attttagatttatttaattaatgatgtatatgatctttattatagaccacatttaa----tgatgaatgaatctaaaatgtt-atttttgcttataattg 798  Q
    |||||||||| ||| ||| |||||||||||| ||||||||||| || |||||  |     | |||||||||||||||||||| ||||||||||||||| |    
T  11726526 attttagattcattcaatcaatgatgtatataatctttattatggatcacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatag 11726625  T
Q  799 tgagcggagggtgtac 814  Q
    |||  ||||| |||||    
T  11726626 tgactggaggatgtac 11726641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 705 - 755
Target Start/End: Complemental strand, 14393228 - 14393178
Alignment:
Q  705 ttttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||||||||||||||||||||||||||   || ||||||||||||    
T  14393228 ttttagatttatttaattaatgatgtatatgattcatagtatagaccacat 14393178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 26234156 - 26234082
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||| |||| |||||||||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  26234156 cactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacat 26234082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 702 - 752
Target Start/End: Complemental strand, 32218687 - 32218637
Alignment:
Q  702 atattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    |||||||||||| ||| |||||||||||||||| || ||||||||||||||    
T  32218687 atattttagattcattcaattaatgatgtatataatttttattatagacca 32218637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 705 - 755
Target Start/End: Original strand, 37396236 - 37396286
Alignment:
Q  705 ttttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||| ||| ||||||||||||||||||| | |||||||||||||||    
T  37396236 ttttagattcattcaattaatgatgtatatgatttatattatagaccacat 37396286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 38618527 - 38618453
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| ||||||  ||||||||| |||||| ||| ||| ||||||  ||||||| |||||||||||||||||||||    
T  38618527 cactattataaggaaaaatttacattttacattcattcaattaaaaatgtataagatctttattatagaccacat 38618453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 686 - 744
Target Start/End: Complemental strand, 40187370 - 40187312
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttatt 744  Q
    ||||||||||||||||| |||||||||| ||| | |||||||||||| || ||||||||    
T  40187370 ttataaacaaaaatttacattttagattgattcagttaatgatgtatgtggtctttatt 40187312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 762 - 814
Target Start/End: Original strand, 8510598 - 8510651
Alignment:
Q  762 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgtac 814  Q
    ||||||||||| ||||||||| |||||||||||||| |||| ||||||||||||    
T  8510598 atgaatgaatccaaaatgttagtttttgcttataatagtgaccggagggtgtac 8510651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 705 - 749
Target Start/End: Original strand, 5762533 - 5762577
Alignment:
Q  705 ttttagatttatttaattaatgatgtatatgatctttattataga 749  Q
    ||||| ||| ||| |||||||||||||||||||||||||||||||    
T  5762533 ttttaaattcattcaattaatgatgtatatgatctttattataga 5762577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 719 - 755
Target Start/End: Complemental strand, 10602388 - 10602352
Alignment:
Q  719 aattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||||||||||| |||||||||||||||||||    
T  10602388 aattaatgatgtatatggtctttattatagaccacat 10602352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 686 - 755
Target Start/End: Original strand, 11153216 - 11153287
Alignment:
Q  686 ttataaacaaaaatttat--attttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| |||||| ||||  |||||||||| ||| |||||||||||||| ||  ||||||||||||||||||    
T  11153216 ttataagcaaaaaattatgcattttagattcattcaattaatgatgtatgtgggctttattatagaccacat 11153287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 686 - 742
Target Start/End: Complemental strand, 39939888 - 39939832
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatcttta 742  Q
    ||||||||||||||| |||||||| ||| ||||||| |||||||||  |||||||||    
T  39939888 ttataaacaaaaattgatattttaaattcatttaataaatgatgtacgtgatcttta 39939832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 694 - 749
Target Start/End: Complemental strand, 15861778 - 15861723
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattataga 749  Q
    |||||| |||||||||||||  || ||||||| |||||||| ||||||||||||||    
T  15861778 aaaaatctatattttagattcgttcaattaattatgtatataatctttattataga 15861723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 763 - 813
Target Start/End: Original strand, 27331853 - 27331904
Alignment:
Q  763 tgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgta 813  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||| ||||    
T  27331853 tgaatgaatctaaaatgttgatttttgcttataatagtgaccggaggatgta 27331904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 688 - 755
Target Start/End: Original strand, 37182831 - 37182898
Alignment:
Q  688 ataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||||||| |||||||||| ||| | | ||||||||||||   ||||||||||||||||||    
T  37182831 ataagcaaaaatttacattttagattcattaattaaatgatgtatatagcctttattatagaccacat 37182898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 40204448 - 40204525
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtat---atgatctttattatagaccacat 755  Q
    |||| |||||| ||||||| |||||| || ||| ||| ||||||||||||||   ||||||||||||||||| |||||    
T  40204448 cactattataagcaaaaatctatattatacattcattcaattaatgatgtatatgatgatctttattatagatcacat 40204525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 681 - 752
Target Start/End: Original strand, 41805282 - 41805353
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    |||| |||||| ||||| |||  |||||| ||| ||| ||||||||||||||||  ||||||||||||||||    
T  41805282 cactattataagcaaaattttgcattttaaattcattcaattaatgatgtatatagtctttattatagacca 41805353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 694 - 732
Target Start/End: Complemental strand, 4032727 - 4032689
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtat 732  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  4032727 aaaaatttattttttagatttatttatttaatgatgtat 4032689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 11093661 - 11093588
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| ||||||||||||||| | |||  | ||| ||||||||||| ||||||||  |||||||||||||||||||    
T  11093661 cacttttataaacaaaaattaacattaaa-attcatttaattaattatgtatatagtctttattatagaccacat 11093588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 694 - 752
Target Start/End: Complemental strand, 27497386 - 27497328
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    |||||| || ||||||||||  |||| ||||| ||||||||| ||||||||||||||||    
T  27497386 aaaaatctacattttagattcctttatttaataatgtatatggtctttattatagacca 27497328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 699 - 745
Target Start/End: Original strand, 31175107 - 31175153
Alignment:
Q  699 tttatattttagatttatttaattaatgatgtatatgatctttatta 745  Q
    ||||||||||||||| ||| |||||||||||||| |||||| |||||    
T  31175107 tttatattttagattcattcaattaatgatgtatctgatctatatta 31175153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 32143538 - 32143464
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||||| ||||| |||| |||||| ||| ||| ||||||||| ||||||  ||||||| ||| |||||||    
T  32143538 cactgttataagcaaaactttacattttaaattcattcaattaatgaagtatatagtctttatcataaaccacat 32143464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 705 - 755
Target Start/End: Original strand, 41823773 - 41823823
Alignment:
Q  705 ttttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||| ||| |||||||||||||||||| |||| | |||||||||||||||    
T  41823773 ttttaaattcatttaattaatgatgtatttgatttatattatagaccacat 41823823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 704 - 738
Target Start/End: Complemental strand, 42955142 - 42955108
Alignment:
Q  704 attttagatttatttaattaatgatgtatatgatc 738  Q
    |||||||||||||| ||||||||||||||||||||    
T  42955142 attttagatttattcaattaatgatgtatatgatc 42955108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 694 - 755
Target Start/End: Original strand, 10041563 - 10041624
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||| |||||||||| |||||||||||||||||| || | | || ||||||||||||    
T  10041563 aaaattttacattttagattcatttaattaatgatgtatgtggtttataatatagaccacat 10041624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 686 - 747
Target Start/End: Original strand, 13304484 - 13304545
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    ||||||| ||||||||||||||||||||  || ||||  | |||||||| ||||||||||||    
T  13304484 ttataaataaaaatttatattttagattctttcaattttttatgtatataatctttattata 13304545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 762 - 814
Target Start/End: Original strand, 13882776 - 13882829
Alignment:
Q  762 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgtac 814  Q
    ||||||||||||||||||||| |||||| ||||||| ||||  |||||||||||    
T  13882776 atgaatgaatctaaaatgttagtttttgtttataatagtgacgggagggtgtac 13882829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 762 - 814
Target Start/End: Original strand, 14022901 - 14022954
Alignment:
Q  762 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgtac 814  Q
    ||||||||||||||||||||| |||||| ||||||| ||||  |||||||||||    
T  14022901 atgaatgaatctaaaatgttagtttttgattataatagtgacaggagggtgtac 14022954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 763 - 815
Target Start/End: Original strand, 14308740 - 14308793
Alignment:
Q  763 tgaatgaatctaaaatgttatttt-tgcttataattgtgagcggagggtgtaca 815  Q
    |||||||||||||||| | ||||| |||||||| |||||| |||||||||||||    
T  14308740 tgaatgaatctaaaatatgattttttgcttatatttgtgatcggagggtgtaca 14308793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 686 - 739
Target Start/End: Complemental strand, 23378069 - 23378016
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatct 739  Q
    |||||| |||||||| |||||||||||| ||||| | |||||||||| ||||||    
T  23378069 ttataagcaaaaattaatattttagattcatttattaaatgatgtatgtgatct 23378016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 686 - 755
Target Start/End: Original strand, 43732151 - 43732220
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| ||||||| || |||||||||| ||| ||||||||||| ||||| || |||| ||| |||||||    
T  43732151 ttataagcaaaaatatacattttagattcattcaattaatgatgaatatggtcattatcatataccacat 43732220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 7e-24; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 681 - 814
Target Start/End: Original strand, 52215888 - 52216026
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 776  Q
    |||| |||||| |||||||||| |||||||||| ||  |||| ||||||||||||||||||||||||||||||||  |     | |||| ||||||||||    
T  52215888 cactattataagcaaaaatttacattttagattcatgcaattgatgatgtatatgatctttattatagaccacatacatcatttaatgagtgaatctaaa 52215987  T
Q  777 atgtt-atttttgcttataattgtgagcggagggtgtac 814  Q
    ||||| ||||||||||||||| |||| ||||||||||||    
T  52215988 atgttgatttttgcttataatagtgaccggagggtgtac 52216026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 686 - 801
Target Start/End: Original strand, 37897695 - 37897815
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat--ttaa--tgatgaatgaatctaaaatgtt 781  Q
    |||||| ||||||| || |||||||||| ||| |||||||||||||||||||||||||||||||||||||   |||  | |||||||||| |||||||||    
T  37897695 ttataagcaaaaatctaaattttagattcattcaattaatgatgtatatgatctttattatagaccacatacataatttaatgaatgaatttaaaatgtt 37897794  T
Q  782 -atttttgcttataattgtga 801  Q
     ||||||||||||||| ||||    
T  37897795 gatttttgcttataatagtga 37897815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 681 - 814
Target Start/End: Original strand, 12744909 - 12745047
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 776  Q
    |||| |||||| |||||| ||| |||||||||| ||| ||||||||||||||||| |||||||||||||||||||  |     | ||||||| |||||||    
T  12744909 cactattataagcaaaaacttacattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgtatctaaa 12745008  T
Q  777 atgtt-atttttgcttataattgtgagcggagggtgtac 814  Q
    ||||| ||||||||||||||| |||| || |||||||||    
T  12745009 atgttaatttttgcttataatagtgaccgaagggtgtac 12745047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 29389335 - 29389409
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| |||||||||||||||||||||  || ||||||||||||||||||||||||||||||| |||||    
T  29389335 cactattataagcaaaaatttatattttagattcgttcaattaatgatgtatatgatctttattatagatcacat 29389409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 686 - 755
Target Start/End: Original strand, 9492689 - 9492758
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| || |||||||||||||| ||||    
T  9492689 ttataaacaaaaatttacattttagatttatttaattaattatgtatgtggtctttattatagacgacat 9492758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 681 - 813
Target Start/End: Complemental strand, 10872804 - 10872667
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 776  Q
    |||| |||||| ||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||| | |||||  |     | |||||||||| ||||    
T  10872804 cactattataagcaaaaatttatattttagattcattcaattaatgatgtatatggtctttattataaatcacatacatcatttaatgaatgaatttaaa 10872705  T
Q  777 atgtt-atttttgcttataattgtgagcggagggtgta 813  Q
    || || ||||||||||||||| ||||  ||||||||||    
T  10872704 atattgatttttgcttataatagtgactggagggtgta 10872667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 687 - 755
Target Start/End: Complemental strand, 35987557 - 35987489
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||||||||||||| |||||    
T  35987557 tataaacaaaattttatattttagatttattcaattaataatgtatatgttctttattatagatcacat 35987489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 681 - 813
Target Start/End: Complemental strand, 45736819 - 45736682
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 776  Q
    |||| |||||| ||||| ||||||||||| ||| ||| ||||||||||||| |||||||||||||||||||||||  |     | |||||||||||||||    
T  45736819 cactattataagcaaaattttatattttaaattcattcaattaatgatgtacatgatctttattatagaccacatacatcatttaatgaatgaatctaaa 45736720  T
Q  777 atgt-tatttttgcttataattgtgagcggagggtgta 813  Q
     | |  ||||||||||||||| |||| |||||||||||    
T  45736719 ctatcgatttttgcttataatagtgaccggagggtgta 45736682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 694 - 755
Target Start/End: Original strand, 50466834 - 50466894
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  50466834 aaaaatttatattttagattcattcaattaatgatgtatatgatcttta-tatagaccacat 50466894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 694 - 755
Target Start/End: Original strand, 14756429 - 14756490
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||| |||||||||||||| | ||||||||||||||| |||||||||||||||||||    
T  14756429 aaaattttacattttagatttattcatttaatgatgtatatggtctttattatagaccacat 14756490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 686 - 747
Target Start/End: Original strand, 51060676 - 51060737
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||||| |||||||||| |||||||||| ||| ||||||| |||||||||||||||||||||    
T  51060676 ttataagcaaaaatttacattttagattaattcaattaataatgtatatgatctttattata 51060737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 704 - 755
Target Start/End: Original strand, 26121570 - 26121621
Alignment:
Q  704 attttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||| ||| ||||||||||||||||| |||||||||||||||||||    
T  26121570 attttagattcattcaattaatgatgtatatggtctttattatagaccacat 26121621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 331930 - 331856
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| |||||||| | |||||||||| ||| | | |||||||||||| ||||||||||||||||||||    
T  331930 cactattataagcaaaaattaacattttagattcattcattaaatgatgtatataatctttattatagaccacat 331856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 705 - 755
Target Start/End: Complemental strand, 4182039 - 4181989
Alignment:
Q  705 ttttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  4182039 ttttagatttattcaatcaatgatgtatatgatctatattatagaccacat 4181989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 705 - 755
Target Start/End: Original strand, 26244412 - 26244462
Alignment:
Q  705 ttttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||| ||| ||||||||||||||||| |||||||||||||||||||    
T  26244412 ttttagattcattcaattaatgatgtatatggtctttattatagaccacat 26244462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 29222934 - 29222861
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||||| ||||  ||| ||||||| ||||||| ||||||| |||||||||||||||||||||||| ||||    
T  29222934 cactgttataagcaaac-tttgtattttaaatttattcaattaataatgtatatgatctttattatagacaacat 29222861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 688 - 737
Target Start/End: Original strand, 31474749 - 31474798
Alignment:
Q  688 ataaacaaaaatttatattttagatttatttaattaatgatgtatatgat 737  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||||||||    
T  31474749 ataaacaaaattttatattttagattcatttaataaatgatgtatatgat 31474798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 762 - 813
Target Start/End: Original strand, 331891 - 331943
Alignment:
Q  762 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgta 813  Q
    ||||||||||||||||||||| |||||||||||||| |||| |||||||||||    
T  331891 atgaatgaatctaaaatgttaatttttgcttataatagtgaccggagggtgta 331943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 687 - 747
Target Start/End: Original strand, 32758980 - 32759040
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||||| |||||||||| |||||||| ||||||||||||||||||  || |||||||||||    
T  32758980 tataaataaaaatttattttttagatatatttaattaatgatgtacgtggtctttattata 32759040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 699 - 747
Target Start/End: Original strand, 35237704 - 35237752
Alignment:
Q  699 tttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    ||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  35237704 tttatattttagatccatttaattaatgatgtatatggtctttattata 35237752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 698 - 755
Target Start/End: Complemental strand, 37807627 - 37807568
Alignment:
Q  698 atttatattttagatttattt--aattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||||||||||| |||  ||||||||||||||||| ||||||||||| |||||||    
T  37807627 atttatattttagattttttttcaattaatgatgtatatggtctttattataaaccacat 37807568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 681 - 752
Target Start/End: Original strand, 43177096 - 43177170
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatga---tgtatatgatctttattatagacca 752  Q
    |||| |||||||||||||| || |||||| ||| |||||||||||||   ||||||| |||||||||||||||||    
T  43177096 cactattataaacaaaaatctacattttaaattcatttaattaatgatggtgtatataatctttattatagacca 43177170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 686 - 808
Target Start/End: Complemental strand, 24075572 - 24075447
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt 781  Q
    |||||| ||||||| || |||||||||| ||| |||| |||||||||||| |||||||  ||||||||||  |     | ||||||||||||||||||||    
T  24075572 ttataagcaaaaatctacattttagattcattcaattcatgatgtatatgctctttat--tagaccacataaatcatttaatgaatgaatctaaaatgtt 24075475  T
Q  782 -atttttgcttataattgtgagcggagg 808  Q
      |||||||||||||| |||| ||||||    
T  24075474 gttttttgcttataatagtgaccggagg 24075447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 704 - 755
Target Start/End: Original strand, 26243710 - 26243761
Alignment:
Q  704 attttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||| ||| ||||||| |||||||| ||||||||||||||||||||    
T  26243710 attttagattcattcaattaataatgtatatcatctttattatagaccacat 26243761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 688 - 747
Target Start/End: Complemental strand, 29512256 - 29512197
Alignment:
Q  688 ataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||| ||||||||||| ||||||||  |||||||||||||||||| || |||||||||||    
T  29512256 ataagcaaaaatttattttttagatacatttaattaatgatgtatgtggtctttattata 29512197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 686 - 749
Target Start/End: Original strand, 47334655 - 47334718
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattataga 749  Q
    |||||| ||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||||||||||    
T  47334655 ttataagcaaaactttgtattttaaattcattcaattaatgatgtatatgatttttattataga 47334718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 765 - 814
Target Start/End: Complemental strand, 7882325 - 7882275
Alignment:
Q  765 aatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgtac 814  Q
    |||||||||||||||||| |||||||||||||| |||| ||||||||||||    
T  7882325 aatgaatctaaaatgttaatttttgcttataatagtgaccggagggtgtac 7882275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 747
Target Start/End: Complemental strand, 24694360 - 24694294
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||| ||||||||||||||  | ||||| ||||||||||||||||||||||||  || |||||||||    
T  24694360 cactattataaacaaaaatcaacatttttgatttatttaattaatgatgtatacaatttttattata 24694294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 38677573 - 38677647
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||| |||| |||||||||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  38677573 cactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacat 38677647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 691 - 733
Target Start/End: Complemental strand, 47650564 - 47650522
Alignment:
Q  691 aacaaaaatttatattttagatttatttaattaatgatgtata 733  Q
    ||||||||| |||||||||||||||||||||||||| ||||||    
T  47650564 aacaaaaatctatattttagatttatttaattaatgttgtata 47650522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 686 - 755
Target Start/End: Complemental strand, 3074905 - 3074836
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| |||||||||| |||||||||| ||| | ||||||||| | |||||||||||| |||| |||||    
T  3074905 ttataagcaaaaatttacattttagattcattcatttaatgatgcacatgatctttattgtagatcacat 3074836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 681 - 750
Target Start/End: Complemental strand, 3648831 - 3648762
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac 750  Q
    |||| |||||| ||||| ||||||||||| ||| ||| ||| ||||||||||||  ||||||||||||||    
T  3648831 cactattataagcaaaactttatattttacattcattcaatcaatgatgtatatagtctttattatagac 3648762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 686 - 755
Target Start/End: Complemental strand, 4821508 - 4821439
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| | |||||||| |||||| ||||||| ||| || |||| |||||||||||||||| ||||||||    
T  4821508 ttataagcgaaaatttacattttaaatttattcaatcaacgatgaatatgatctttattattgaccacat 4821439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 694 - 747
Target Start/End: Original strand, 34327529 - 34327582
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||| ||| ||||||| ||||||||||||||||||||||||||| || ||||||    
T  34327529 aaaattttgtattttatatttatttaattaatgatgtatatgattttgattata 34327582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 686 - 755
Target Start/End: Complemental strand, 51253797 - 51253728
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| |||||||| ||||| |||||| ||| ||| ||| |||||||||| ||||||||||||| ||||    
T  51253797 ttataagcaaaaattaatattgtagattcattcaatcaataatgtatatgaactttattatagacaacat 51253728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 762 - 813
Target Start/End: Complemental strand, 8504897 - 8504845
Alignment:
Q  762 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgta 813  Q
    |||||||||||||||||||  ||||||||||||||| |||| |||||||||||    
T  8504897 atgaatgaatctaaaatgtagatttttgcttataatagtgaccggagggtgta 8504845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 686 - 814
Target Start/End: Complemental strand, 27224707 - 27224574
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacatttaa----tgatgaatgaatctaaaatgtt 781  Q
    |||||| ||||||||   |||||||||| ||| | | |||||||||||| || ||||||||||| |||||  |     | |||||| |||||||||||||    
T  27224707 ttataagcaaaaattagcattttagattgattcattaaatgatgtatataatttttattatagatcacatacatcatttaatgaataaatctaaaatgtt 27224608  T
Q  782 -atttttgcttataattgtgagcggagggtgtac 814  Q
     ||||||| ||||||| |||| ||||||||||||    
T  27224607 gatttttgtttataatagtgaccggagggtgtac 27224574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 694 - 755
Target Start/End: Complemental strand, 43599221 - 43599156
Alignment:
Q  694 aaaaatttatattttagatttatttaat----taatgatgtatatgatctttattatagaccacat 755  Q
    |||| ||||||||||| |||||||||||    ||||||||||||| |||||||||||||| |||||    
T  43599221 aaaattttatattttaaatttatttaattaattaatgatgtatattatctttattatagatcacat 43599156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 700 - 752
Target Start/End: Original strand, 49412312 - 49412364
Alignment:
Q  700 ttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    ||||||||||  |||||| ||||||||||||| || |||||||||||||||||    
T  49412312 ttatattttaagtttattcaattaatgatgtacataatctttattatagacca 49412364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 762 - 814
Target Start/End: Original strand, 54595883 - 54595935
Alignment:
Q  762 atgaatgaatctaaaatgttatttttgcttataattgtgagcggagggtgtac 814  Q
    |||||||||||||||||  ||||||| |||||||| |||| ||||||||||||    
T  54595883 atgaatgaatctaaaattatatttttacttataatagtgaccggagggtgtac 54595935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 688 - 755
Target Start/End: Complemental strand, 4980398 - 4980331
Alignment:
Q  688 ataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||||| |||||||||||| ||| ||| |||||||||| |  |||||||||||||| ||||    
T  4980398 ataagcaaaaattcatattttagattcattcaataaatgatgtatgtagtctttattatagacaacat 4980331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 681 - 752
Target Start/End: Complemental strand, 41743722 - 41743651
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    |||| ||||||  |||| |||| ||||| |||| ||| | ||||||||||||||| ||||||||||||||||    
T  41743722 cactattataagtaaaagtttacattttggattcattcagttaatgatgtatatggtctttattatagacca 41743651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 762 - 813
Target Start/End: Original strand, 42930110 - 42930160
Alignment:
Q  762 atgaatgaatctaaaatgttatttttgcttataattgtgagcggagggtgta 813  Q
    |||||||||| ||||||||| |||||||||||||| |||| |||||||||||    
T  42930110 atgaatgaatttaaaatgtt-tttttgcttataatagtgatcggagggtgta 42930160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 684 - 722
Target Start/End: Original strand, 1752348 - 1752386
Alignment:
Q  684 tgttataaacaaaaatttatattttagatttatttaatt 722  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  1752348 tgttatagacaaaaatttatattttagatttattgaatt 1752386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 8504858 - 8504932
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||||| || |||||||||| ||| | ||| ||||| | ||| |||||||||||||||||||    
T  8504858 cactattataagcaaaaatctacattttagattcattcatttattgatgcacatggtctttattatagaccacat 8504932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 764 - 813
Target Start/End: Complemental strand, 9170157 - 9170107
Alignment:
Q  764 gaatgaatctaaaatgttattttt-gcttataattgtgagcggagggtgta 813  Q
    ||||||||||||||||| |||||| ||||||||| |||| |||||||||||    
T  9170157 gaatgaatctaaaatgtaattttttgcttataatagtgaccggagggtgta 9170107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 686 - 744
Target Start/End: Original strand, 20619004 - 20619062
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttatt 744  Q
    ||||||||||||||||| |||||  ||| ||| |||||||||| |||||| ||||||||    
T  20619004 ttataaacaaaaatttacattttgcattcattcaattaatgatatatatggtctttatt 20619062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 762 - 815
Target Start/End: Original strand, 30519691 - 30519745
Alignment:
Q  762 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgtaca 815  Q
    ||||||||||||||||||||  |||||||||||||| |||| | |||||||||||    
T  30519691 atgaatgaatctaaaatgttggtttttgcttataatagtgaccagagggtgtaca 30519745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 762 - 815
Target Start/End: Complemental strand, 38677612 - 38677558
Alignment:
Q  762 atgaatgaatctaaaatgttat-ttttgcttataattgtgagcggagggtgtaca 815  Q
    ||||||||||||||||||| |  ||||||||||||| |||| |||||||||||||    
T  38677612 atgaatgaatctaaaatgtaaacttttgcttataatagtgaccggagggtgtaca 38677558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 689 - 755
Target Start/End: Complemental strand, 52866541 - 52866475
Alignment:
Q  689 taaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||||| | |||||||||| ||| | | ||| || ||||| ||||||||||||||||||||    
T  52866541 taaacaaaaattaacattttagattcattcattaaataatatatataatctttattatagaccacat 52866475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 722 - 801
Target Start/End: Complemental strand, 54783468 - 54783384
Alignment:
Q  722 taatgatgtatatgatctttattatagaccacat---ttaa-tgatgaatgaatctaaaatgtt-atttttgcttataattgtga 801  Q
    |||||||||||| |||||||||||||||||||||   | || | || ||||||||||||||||| ||||||| ||||||| ||||    
T  54783468 taatgatgtataagatctttattatagaccacatacatcaattaattaatgaatctaaaatgttaatttttgtttataatagtga 54783384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 766 - 814
Target Start/End: Original strand, 7829140 - 7829189
Alignment:
Q  766 atgaatctaaaatgttattttt-gcttataattgtgagcggagggtgtac 814  Q
    ||||||||||||||||| |||| ||||||||| |||| ||||||||||||    
T  7829140 atgaatctaaaatgttaattttagcttataatagtgatcggagggtgtac 7829189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 687 - 728
Target Start/End: Complemental strand, 7981271 - 7981230
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgat 728  Q
    ||||| ||||||||||||||||||||||||| ||| ||||||    
T  7981271 tataagcaaaaatttatattttagatttattcaataaatgat 7981230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 687 - 732
Target Start/End: Complemental strand, 38455291 - 38455246
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtat 732  Q
    ||||||||||||||||  ||||||||  ||||||||||||||||||    
T  38455291 tataaacaaaaatttactttttagatacatttaattaatgatgtat 38455246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 762 - 810
Target Start/End: Original strand, 40639802 - 40639851
Alignment:
Q  762 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggt 810  Q
    |||||||||| |||||||||| |||||||||||||| |||| ||||||||    
T  40639802 atgaatgaatttaaaatgttaatttttgcttataatagtgaccggagggt 40639851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 762 - 814
Target Start/End: Complemental strand, 48191762 - 48191709
Alignment:
Q  762 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgtac 814  Q
    |||||||||||||||||||| ||||||| ||||||| |||| |||||| |||||    
T  48191762 atgaatgaatctaaaatgttaatttttgtttataatagtgaccggaggatgtac 48191709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 686 - 747
Target Start/End: Complemental strand, 50745093 - 50745032
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    ||||||| ||||||||| |||||| |||  |||||||||||||||||||  | |||||||||    
T  50745093 ttataaataaaaatttacattttatattcgtttaattaatgatgtatatagtatttattata 50745032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 706 - 751
Target Start/End: Original strand, 53638424 - 53638469
Alignment:
Q  706 tttagatttatttaattaatgatgtatatgatctttattatagacc 751  Q
    |||| |||||||||||||||||| |||||  |||||||||||||||    
T  53638424 tttaaatttatttaattaatgatatatattgtctttattatagacc 53638469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 1e-22; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 681 - 752
Target Start/End: Complemental strand, 26477293 - 26477222
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||    
T  26477293 cactattataaacaaaaatttatatttaagatttatttaattaatgatgtatatgatctttaatataaacca 26477222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 681 - 752
Target Start/End: Complemental strand, 26553733 - 26553662
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||    
T  26553733 cactattataaacaaaaatttatatttaagatttatttaattaatgatgtatatgatctttaatataaacca 26553662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 704 - 813
Target Start/End: Complemental strand, 10095828 - 10095714
Alignment:
Q  704 attttagatttatttaattaatgatgtatatgatctttattatagaccacatttaa----tgatgaatgaatctaaaatgtta-tttttgcttataattg 798  Q
    |||||||||||||||| ||||| ||||||||| ||||||| |||||||||||  |     | ||||||||||||||||||||| |||||||||||||| |    
T  10095828 attttagatttatttatttaattatgtatatggtctttatcatagaccacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatag 10095729  T
Q  799 tgagcggagggtgta 813  Q
    ||| |||||||||||    
T  10095728 tgaccggagggtgta 10095714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 686 - 807
Target Start/End: Original strand, 3882820 - 3882949
Alignment:
Q  686 ttataaacaaaaatttatattttagatttat----ttaattaatgatgtatatgatctttattatagaccacat--ttaat--gatgaatgaatctaaaa 777  Q
    ||||||||||||||| |||||||||||| ||    |||||||||||||||| |  |||||||||||||||||||   ||||   ||||||||||||||||    
T  3882820 ttataaacaaaaattaatattttagattcattcaattaattaatgatgtatttagtctttattatagaccacatacataattcaatgaatgaatctaaaa 3882919  T
Q  778 tgttatttttgcttataattgtgagcggag 807  Q
    ||||  ||||| |||||||||||| |||||    
T  3882920 tgttgattttggttataattgtgaccggag 3882949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 702 - 755
Target Start/End: Complemental strand, 21586925 - 21586872
Alignment:
Q  702 atattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  21586925 atattttagattcattcaattaatgatgtatatgatctttattatagaccacat 21586872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 681 - 754
Target Start/End: Complemental strand, 30138920 - 30138847
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccaca 754  Q
    |||||||||||  ||||||||| |||||||||| ||| ||||||||||||||||  ||||||||||||||||||    
T  30138920 cactgttataagtaaaaatttacattttagattcattcaattaatgatgtatatagtctttattatagaccaca 30138847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 681 - 750
Target Start/End: Original strand, 31813419 - 31813488
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac 750  Q
    |||| ||||||||||||||||| |||||||||| ||| ||||||||||||||||| |||| |||||||||    
T  31813419 cactattataaacaaaaatttacattttagattcattcaattaatgatgtatatggtcttcattatagac 31813488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 687 - 755
Target Start/End: Complemental strand, 46495494 - 46495426
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| |||||| || |||||| |||||||||||||||||||||||| ||||||||||||||| ||||    
T  46495494 tataaataaaaatatacattttaaatttatttaattaatgatgtatattatctttattatagactacat 46495426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 681 - 782
Target Start/End: Original strand, 6847284 - 6847389
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat--ttaa--tgatgaatgaatctaaa 776  Q
    |||| |||||| |||||||||  |||||| ||||||| |||||||||||||||||||||||||||| || |||||   |||  | |||||||||||||||    
T  6847284 cactattataagcaaaaatttgcattttatatttattcaattaatgatgtatatgatctttattatggaacacatacataatttaatgaatgaatctaaa 6847383  T
Q  777 atgtta 782  Q
    ||||||    
T  6847384 atgtta 6847389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 693 - 755
Target Start/End: Complemental strand, 26385745 - 26385683
Alignment:
Q  693 caaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||| |||| ||||| |||||||||||||||||| || |||||||||||||||||||    
T  26385745 caaaaatttacatttaagattcatttaattaatgatgtatgtggtctttattatagaccacat 26385683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 693 - 755
Target Start/End: Original strand, 26904801 - 26904863
Alignment:
Q  693 caaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||||||||||  || ||| ||||||||||||||| |||||||||||||||||||||    
T  26904801 caaaaatttatattttactttcattcaattaatgatgtatacgatctttattatagaccacat 26904863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 681 - 813
Target Start/End: Original strand, 6455557 - 6455694
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat------ttaatgatgaatgaatcta 774  Q
    |||| |||||| |||||||||| |||||||||| ||| | ||||||||| | ||| |||||||||||||||||||      ||||  ||||||||| |||    
T  6455557 cactattataagcaaaaatttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaa--atgaatgaaccta 6455654  T
Q  775 aaatgt-tatttttgcttataattgtgagcggagggtgta 813  Q
    ||||||  ||||||||||||| | |||| |||||||||||    
T  6455655 aaatgtagatttttgcttatattagtgatcggagggtgta 6455694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 686 - 739
Target Start/End: Original strand, 9930401 - 9930454
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatct 739  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||    
T  9930401 ttataaacaaaaatttatattttagattcatttaattaattatgtatataatct 9930454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 681 - 813
Target Start/End: Complemental strand, 2943344 - 2943207
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacatttaa----tgatgaatgaatctaaa 776  Q
    |||| |||||| |||||| |||||||||| ||| ||| ||||||| |||||| |  |||||||| ||||||||||  |     | |||||||||||||||    
T  2943344 cactattataagcaaaaaattatattttacattcattcaattaataatgtatgtactctttattgtagaccacatacatcatttaatgaatgaatctaaa 2943245  T
Q  777 atgtt-atttttgcttataattgtgagcggagggtgta 813  Q
    ||||| ||||||||||||||| |||| || ||||||||    
T  2943244 atgttgatttttgcttataatagtgaccgaagggtgta 2943207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 681 - 813
Target Start/End: Complemental strand, 43103204 - 43103067
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac----cacatttaatgatgaatgaatctaaa 776  Q
    |||| ||||||  |||| |||||||||||||||||||||||||||||||||||| || |||| ||||| |     ||||    | || ||||||| ||||    
T  43103204 cactattataagtaaaattttatattttagatttatttaattaatgatgtatataatttttaatatagtctgcatacatcatttaataaatgaatttaaa 43103105  T
Q  777 atgtt-atttttgcttataattgtgagcggagggtgta 813  Q
    ||||| ||||||||||||||| |||| |||||||||||    
T  43103104 atgttaatttttgcttataatagtgaccggagggtgta 43103067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 702 - 748
Target Start/End: Original strand, 45985589 - 45985635
Alignment:
Q  702 atattttagatttatttaattaatgatgtatatgatctttattatag 748  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  45985589 atattttaggtttatttaattaatgatgtatatgatatttattatag 45985635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 702 - 748
Target Start/End: Original strand, 45989949 - 45989995
Alignment:
Q  702 atattttagatttatttaattaatgatgtatatgatctttattatag 748  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  45989949 atattttaggtttatttaattaatgatgtatatgatatttattatag 45989995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 693 - 746
Target Start/End: Complemental strand, 4089909 - 4089856
Alignment:
Q  693 caaaaatttatattttagatttatttaattaatgatgtatatgatctttattat 746  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||| ||||||||||    
T  4089909 caaaaatttatattttatattcattcaattaatgatgtatatggtctttattat 4089856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 762 - 814
Target Start/End: Original strand, 5950287 - 5950340
Alignment:
Q  762 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgtac 814  Q
    ||||||||||||||||||||| |||||||||||||| |||| ||||||||||||    
T  5950287 atgaatgaatctaaaatgttagtttttgcttataatagtgaccggagggtgtac 5950340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 694 - 755
Target Start/End: Complemental strand, 32549940 - 32549879
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||| |||||||||||| ||| ||| |||||||||| ||||||||| ||||||||||||    
T  32549940 aaaaattgatattttagattcattcaataaatgatgtatgtgatctttaatatagaccacat 32549879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 686 - 755
Target Start/End: Original strand, 45531962 - 45532031
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||| |||||||||||||||||||| ||||||||| | ||||||||  | ||||||||| |||||||    
T  45531962 ttataaataaaaatttatattttagattaatttaattactaatgtatatagtttttattatacaccacat 45532031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 712 - 796
Target Start/End: Complemental strand, 21096288 - 21096199
Alignment:
Q  712 tttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt-atttttgcttataat 796  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||     | |||||| |||||||||| || |||||||||||||||    
T  21096288 tttatttaattaatgatgtatatgatatttattatagatcacatatattatttaatgaataaatctaaaatattaatttttgcttataat 21096199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 762 - 813
Target Start/End: Original strand, 25245236 - 25245288
Alignment:
Q  762 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgta 813  Q
    |||||||||||||||||||| ||||||||||||||| |||| |||||||||||    
T  25245236 atgaatgaatctaaaatgttgatttttgcttataatagtgaccggagggtgta 25245288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 687 - 747
Target Start/End: Original strand, 27554511 - 27554571
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||||| |||||||||| ||||||||  ||| |||||||||||||| ||||||||||||||    
T  27554511 tataaataaaaatttattttttagatacattcaattaatgatgtatgtgatctttattata 27554571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 681 - 752
Target Start/End: Original strand, 41803730 - 41803801
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    |||| ||||||  |||||| || |||||||||||||||| ||||||||| | ||| ||||||||||||||||    
T  41803730 cactattataacaaaaaatctacattttagatttatttatttaatgatgcacatggtctttattatagacca 41803801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 813
Target Start/End: Original strand, 3882560 - 3882697
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 776  Q
    |||| ||||||| ||||||| | |||||||||| ||| |||||||| ||||| | ||||| |||||||||||||| ||     | |||||||||||||||    
T  3882560 cactattataaa-aaaaattaacattttagattcattcaattaatggtgtatttaatcttgattatagaccacatatataatttaatgaatgaatctaaa 3882658  T
Q  777 atgtta--tttttgcttataattgtgagcggagggtgta 813  Q
    ||| ||  ||||| |||||||| |||| |||| ||||||    
T  3882659 atgatattttttttcttataatagtgatcggatggtgta 3882697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 24280953 - 24280879
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| ||||||  |||||| || |||||| ||| ||| |||||||||||||||| || |||||||||||||||||    
T  24280953 cactattataagtaaaaatctacattttaaattcattcaattaatgatgtatataatatttattatagaccacat 24280879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 29205320 - 29205394
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| |||||||  |||||||  ||| ||| |||||||||||||||||||||||||||| || |||||    
T  29205320 cactattataagcaaaaatcaatattttttattcattaaattaatgatgtatatgatctttattatcgatcacat 29205394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 686 - 732
Target Start/End: Original strand, 32490602 - 32490648
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtat 732  Q
    |||||||||||| |||| |||||||||| ||||||||||||||||||    
T  32490602 ttataaacaaaactttacattttagattcatttaattaatgatgtat 32490648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 686 - 731
Target Start/End: Original strand, 21886480 - 21886525
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgta 731  Q
    |||||| ||||||||||||||||||||| ||| |||||||||||||    
T  21886480 ttataagcaaaaatttatattttagattcattcaattaatgatgta 21886525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 710 - 755
Target Start/End: Original strand, 35238976 - 35239021
Alignment:
Q  710 gatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| ||||||||| ||||||||||||||||||| |||||||||    
T  35238976 gatttaattaattaataatgtatatgatctttattacagaccacat 35239021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 682 - 755
Target Start/End: Complemental strand, 39960369 - 39960296
Alignment:
Q  682 actgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||||| |||||||||||||||| ||| ||| |||||||||| ||| |  | ||||||||| |||||||    
T  39960369 actgttataaataaaaatttatattttaaattcattcaattaatgatatatgtagtttttattataaaccacat 39960296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 687 - 732
Target Start/End: Complemental strand, 44416658 - 44416613
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtat 732  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||||    
T  44416658 tataaacaaaaatttatattttagattcattcaattaattatgtat 44416613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 762 - 813
Target Start/End: Complemental strand, 6455596 - 6455544
Alignment:
Q  762 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgta 813  Q
    ||||||||||||||||||| | |||||||||||||| |||| |||||||||||    
T  6455596 atgaatgaatctaaaatgtaaatttttgcttataatagtgatcggagggtgta 6455544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 687 - 747
Target Start/End: Original strand, 22106681 - 22106741
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    ||||| ||||||| ||| |||||||| |||| |||||||||||||| || |||||||||||    
T  22106681 tataagcaaaaatctattttttagatatattcaattaatgatgtatgtggtctttattata 22106741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 683 - 743
Target Start/End: Original strand, 31663046 - 31663106
Alignment:
Q  683 ctgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttat 743  Q
    |||||||||| ||||||| | |||||||||| ||| |||||||||||| |||||| |||||    
T  31663046 ctgttataaataaaaattaaaattttagattaattcaattaatgatgtttatgatatttat 31663106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 684 - 732
Target Start/End: Original strand, 35641489 - 35641537
Alignment:
Q  684 tgttataaacaaaaatttatattttagatttatttaattaatgatgtat 732  Q
    |||||||||||||||||||||||||| ||| ||| ||| ||||||||||    
T  35641489 tgttataaacaaaaatttatattttacattcattcaataaatgatgtat 35641537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 687 - 747
Target Start/End: Complemental strand, 40529670 - 40529610
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    ||||| ||||||| ||| |||||||| |||| |||||||||||||| || |||||||||||    
T  40529670 tataagcaaaaatctattttttagatatattcaattaatgatgtatgtggtctttattata 40529610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 688 - 752
Target Start/End: Original strand, 41106099 - 41106163
Alignment:
Q  688 ataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    |||||||||||| ||||||||| ||| ||||||||||| |||||||| || ||| ||||| ||||    
T  41106099 ataaacaaaaatctatattttaaattcatttaattaataatgtatataatatttgttatatacca 41106163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 681 - 752
Target Start/End: Complemental strand, 8447849 - 8447778
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    |||| |||||| ||||||| || |||||||||| ||| | | ||||||| | ||||||||||||||||||||    
T  8447849 cactattataagcaaaaatctacattttagattcattcattgaatgatgcacatgatctttattatagacca 8447778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 755
Target Start/End: Complemental strand, 23797457 - 23797406
Alignment:
Q  704 attttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||| ||| |||||||||||||| || |||||||||||||| ||||    
T  23797457 attttagattcattcaattaatgatgtatctggtctttattatagactacat 23797406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 686 - 732
Target Start/End: Original strand, 2533953 - 2533999
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtat 732  Q
    |||||| ||||||||||||||||||||||||| |||  |||||||||    
T  2533953 ttataagcaaaaatttatattttagatttattcaatagatgatgtat 2533999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 721 - 755
Target Start/End: Original strand, 18534916 - 18534950
Alignment:
Q  721 ttaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||||| |||||||||||||||||||||||    
T  18534916 ttaatgatgtacatgatctttattatagaccacat 18534950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 26385633 - 26385707
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||||||||| ||||| |||||||||| ||| ||| ||| |||||| || ||| || || |||||||||    
T  26385633 cactgttataaacaaagatttacattttagattcattcaataaattatgtatgtggtctataataaagaccacat 26385707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 705 - 755
Target Start/End: Original strand, 27942357 - 27942407
Alignment:
Q  705 ttttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||| ||| ||||||||||||||||||||  ||||||| |||||||    
T  27942357 ttttagattcattcaattaatgatgtatatgatccatattataaaccacat 27942407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 739
Target Start/End: Original strand, 44819672 - 44819730
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatct 739  Q
    |||| |||||||||||||| ||| ||||||||||||| ||| |||||| || |||||||    
T  44819672 cactattataaacaaaaatgtattttttagatttattaaataaatgatatacatgatct 44819730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 687 - 744
Target Start/End: Complemental strand, 716360 - 716303
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttatt 744  Q
    ||||| ||||||||||  ||||||||  ||| |||||||||||||| |||||||||||    
T  716360 tataagcaaaaatttaatttttagatacattcaattaatgatgtatgtgatctttatt 716303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 704 - 749
Target Start/End: Complemental strand, 5084539 - 5084494
Alignment:
Q  704 attttagatttatttaattaatgatgtatatgatctttattataga 749  Q
    |||||| ||| ||| |||||||||||||||| ||||||||||||||    
T  5084539 attttatattaattcaattaatgatgtatattatctttattataga 5084494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 681 - 738
Target Start/End: Complemental strand, 7716346 - 7716290
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatc 738  Q
    ||||||||||||||||||||||| |||||||||  || ||| ||| ||||||||||||    
T  7716346 cactgttataaacaaaaatttat-ttttagattcgttcaatcaattatgtatatgatc 7716290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 694 - 755
Target Start/End: Original strand, 9555281 - 9555342
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||| |||||| ||||||| ||||||||||||||||  ||||||| ||| |||||||    
T  9555281 aaaattttacattttaaatttattcaattaatgatgtatatagtctttatcataaaccacat 9555342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 702 - 755
Target Start/End: Original strand, 18113264 - 18113317
Alignment:
Q  702 atattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  18113264 atattttagattaattcatttaatgatgcaaatggtctttattatagaccacat 18113317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 687 - 736
Target Start/End: Original strand, 22281457 - 22281506
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatga 736  Q
    ||||||||||||| ||  |||||||| |||| ||||||||||||||||||    
T  22281457 tataaacaaaaatctaatttttagatatattcaattaatgatgtatatga 22281506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 687 - 728
Target Start/End: Original strand, 35216490 - 35216531
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgat 728  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||    
T  35216490 tataaacaaaaatttatattttagattcattcaataaatgat 35216531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 687 - 740
Target Start/End: Complemental strand, 39013142 - 39013089
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctt 740  Q
    |||||||||||||| | |||||| ||| |||||||||||||  |||||||||||    
T  39013142 tataaacaaaaattaacattttaaattcatttaattaatgacatatatgatctt 39013089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 719 - 756
Target Start/End: Original strand, 39136612 - 39136649
Alignment:
Q  719 aattaatgatgtatatgatctttattatagaccacatt 756  Q
    |||||||||||||||| || ||||||||||||||||||    
T  39136612 aattaatgatgtatataatatttattatagaccacatt 39136649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 686 - 747
Target Start/End: Original strand, 43130246 - 43130307
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    ||||||| |||||| ||  ||||||||| ||| |||||||||||||||| || |||||||||    
T  43130246 ttataaataaaaatctacgttttagattcattcaattaatgatgtatataatttttattata 43130307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 7e-21; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 686 - 806
Target Start/End: Complemental strand, 40952475 - 40952350
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt 781  Q
    |||||| ||||||||||||||||||||| ||| ||||||  ||||||||||| ||||||||||||||||| ||     | ||||||||||||||||||||    
T  40952475 ttataagcaaaaatttatattttagattcattcaattaaatatgtatatgatttttattatagaccacatatatcatttaatgaatgaatctaaaatgtt 40952376  T
Q  782 -atttttgcttataattgtgagcgga 806  Q
     ||| ||||||||||| |||| ||||    
T  40952375 gattattgcttataatagtgaacgga 40952350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 687 - 756
Target Start/End: Original strand, 3511723 - 3511792
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacatt 756  Q
    ||||| ||||| |||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  3511723 tataagcaaaactttacattttagattcattcaattaatgatgtatatgatctttattatagaccacatt 3511792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 694 - 755
Target Start/End: Complemental strand, 4708655 - 4708594
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||    
T  4708655 aaaaatttatattttaaattcatttaattaataatgtatatgatctttattatagaccacat 4708594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 694 - 755
Target Start/End: Complemental strand, 10572840 - 10572779
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  10572840 aaaaacttatattatagatttattcaattaatgatgtatatgatctttattatagaccacat 10572779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 694 - 794
Target Start/End: Complemental strand, 19878405 - 19878300
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt-atttttg 788  Q
    ||||||||| |||||| ||| |||||||||||||||||||||||||||||||||| ||||||  |     | |||||||||||||||||||| |||||||    
T  19878405 aaaaatttacattttaaattcatttaattaatgatgtatatgatctttattatagtccacatacatcgtttaatgaatgaatctaaaatgttaatttttg 19878306  T
Q  789 cttata 794  Q
    ||||||    
T  19878305 cttata 19878300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 686 - 813
Target Start/End: Complemental strand, 4406368 - 4406236
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt 781  Q
    |||||| |||||||||||||||| |||| ||| |||||||||||||| || |||||||||||||||||||  |     | |||||| |||||||||||||    
T  4406368 ttataagcaaaaatttatattttggattcattcaattaatgatgtatgtggtctttattatagaccacatacatcatttaatgaataaatctaaaatgtt 4406269  T
Q  782 -atttttgcttataattgtgagcggagggtgta 813  Q
     |||||| |||||||| |||| |||| ||||||    
T  4406268 gatttttacttataatagtgaccggatggtgta 4406236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 48603572 - 48603646
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||| ||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  48603572 cactattataagcaagaatctatattttagatttattcaattaatgatgcatatgatctttattatagatcacat 48603646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 686 - 755
Target Start/End: Original strand, 5816552 - 5816621
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| ||||| ||| ||||||| ||| ||||||||||||||||||||||||||||||||||| |||||    
T  5816552 ttataagcaaaactttgtattttaaattcatttaattaatgatgtatatgatctttattatagatcacat 5816621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 694 - 747
Target Start/End: Original strand, 18423913 - 18423966
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  18423913 aaaaatttatattttagattcattcaattaatgatgtatatgatctttattata 18423966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 686 - 747
Target Start/End: Complemental strand, 21142217 - 21142156
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||||| ||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  21142217 ttataagcaaaagtttatattttagattcatttaattaatgatgtatatggtctttattata 21142156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 696 - 801
Target Start/End: Complemental strand, 18626824 - 18626716
Alignment:
Q  696 aaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgttatttttgctt 791  Q
    ||||||| |||||||||||||| ||||||||||| ||||||||||||||||| |||||||  |     | ||||||||||||||||| | ||||||||||    
T  18626824 aaatttacattttagatttattcaattaatgatgcatatgatctttattataaaccacatacatcatttaatgaatgaatctaaaat-taatttttgctt 18626726  T
Q  792 ataattgtga 801  Q
    ||||| ||||    
T  18626725 ataatagtga 18626716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 686 - 810
Target Start/End: Original strand, 36786163 - 36786292
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt 781  Q
    ||||||||||||||  | |||||||||| ||| ||||||||||||||||  ||||||||||| |||||||  |     ||||||||||||| ||||| ||    
T  36786163 ttataaacaaaaatcaacattttagattcattcaattaatgatgtatatagtctttattataaaccacatacatcatttgatgaatgaatccaaaatatt 36786262  T
Q  782 -atttttgcttataattgtgagcggagggt 810  Q
     ||||||||||||||| |||| ||||||||    
T  36786263 gatttttgcttataatagtgaccggagggt 36786292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 686 - 749
Target Start/End: Complemental strand, 7740617 - 7740554
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattataga 749  Q
    |||||| ||||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||    
T  7740617 ttataagcaaaaatttatattttaaattcattaaattaatgatgtatgtgatctttattataga 7740554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 32599488 - 32599562
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||||||||||  ||||||||| ||||||| ||||||| ||||||||| ||||||||||| |||||||    
T  32599488 cactattataaacaaaaaactatattttatatttattaaattaattatgtatatggtctttattataaaccacat 32599562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 693 - 755
Target Start/End: Original strand, 38298110 - 38298172
Alignment:
Q  693 caaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||| |||||||    
T  38298110 caaaattttatattttagattcattcaattaatgatgtatatggtctttattataaaccacat 38298172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 690 - 755
Target Start/End: Complemental strand, 48414979 - 48414914
Alignment:
Q  690 aaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||| || |||||||||||||| | ||||||||| | |||||||||||||||||||||||    
T  48414979 aaacaaaaatctacattttagatttattcatttaatgatgcacatgatctttattatagaccacat 48414914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 687 - 755
Target Start/End: Original strand, 22493590 - 22493658
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||||||||| |||| | |||||||| |||| |||||||||||| ||||||||||||| |||||    
T  22493590 tataaacaaaaatttgtattatggatttattcaattgatgatgtatatggtctttattatagatcacat 22493658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 681 - 753
Target Start/End: Original strand, 24798135 - 24798207
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccac 753  Q
    |||| ||||||  ||||||||| |||||| ||||||| | |||||| ||||||||||||||||||||||||||    
T  24798135 cactattataagtaaaaatttacattttatatttattcatttaatggtgtatatgatctttattatagaccac 24798207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 702 - 814
Target Start/End: Original strand, 40814698 - 40814815
Alignment:
Q  702 atattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt-atttttgcttataat 796  Q
    |||||||||||| ||| || ||||||| |||||||||||||||||| ||||||| ||     | |||||||||||||||||||| ||||||| ||||||     
T  40814698 atattttagattcattcaactaatgatatatatgatctttattataaaccacatatatcatttaatgaatgaatctaaaatgttaatttttgtttataac 40814797  T
Q  797 tgtgagcggagggtgtac 814  Q
     |||| || |||||||||    
T  40814798 agtgaccgaagggtgtac 40814815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 695 - 755
Target Start/End: Original strand, 49231300 - 49231360
Alignment:
Q  695 aaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||| ||||||||| ||| |||||||||||||| ||||||||||||||| ||||||||||    
T  49231300 aaaatctatattttaaattcatttaattaatgatatatatgatctttattgtagaccacat 49231360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 699 - 755
Target Start/End: Complemental strand, 50686119 - 50686063
Alignment:
Q  699 tttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||||||||| ||| |||||| |||||||||||||||||||||||| |||||    
T  50686119 tttatattttagattcattcaattaacgatgtatatgatctttattatagatcacat 50686063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 704 - 755
Target Start/End: Original strand, 4484105 - 4484156
Alignment:
Q  704 attttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||| ||| ||||||||||||||||| |||||||||||||||||||    
T  4484105 attttagattcattcaattaatgatgtatatggtctttattatagaccacat 4484156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 687 - 746
Target Start/End: Complemental strand, 7215606 - 7215547
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattat 746  Q
    ||||||||||||||||||||||| |||  || ||||||||||| ||||||||||||||||    
T  7215606 tataaacaaaaatttatattttaaattcgttcaattaatgatgcatatgatctttattat 7215547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 694 - 752
Target Start/End: Original strand, 23071427 - 23071485
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    |||||||||||||||||||| ||| | ||||||||| | ||||||||||||||||||||    
T  23071427 aaaaatttatattttagattcattcatttaatgatgcacatgatctttattatagacca 23071485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 686 - 813
Target Start/End: Original strand, 33693982 - 33694114
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat--ttaa--tgatgaatgaatctaaaa-tgt 780  Q
    |||||| ||||| |||  ||||||||||  || ||||||||||||||||| |||||||||||||||||||   |||  | ||||||||| |||||| | |    
T  33693982 ttataagcaaaattttgcattttagattcgttcaattaatgatgtatatggtctttattatagaccacatacataatttaatgaatgaacctaaaattat 33694081  T
Q  781 tatttttgcttataattgtgagcggagggtgta 813  Q
    | |||||||||||||| ||||  ||||||||||    
T  33694082 tttttttgcttataatagtgactggagggtgta 33694114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 684 - 742
Target Start/End: Original strand, 48995567 - 48995625
Alignment:
Q  684 tgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatcttta 742  Q
    |||||||||||||| ||||||||||||||| ||||||| ||| |||||| |||||||||    
T  48995567 tgttataaacaaaattttatattttagattcatttaataaataatgtatgtgatcttta 48995625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 694 - 755
Target Start/End: Original strand, 55416321 - 55416380
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||||||| ||||| ||| |||||||||||||||||  ||||||||||||||||||    
T  55416321 aaaaatttatatttgagattcattcaattaatgatgtatatg--ctttattatagaccacat 55416380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 686 - 755
Target Start/End: Original strand, 16170923 - 16170992
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||| |||| |||| |||||||||| ||| |||||||| |||||||| |||||||||||||| ||||    
T  16170923 ttataaaaaaaactttacattttagattcattcaattaatggtgtatatggtctttattatagactacat 16170992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 686 - 755
Target Start/End: Complemental strand, 21113119 - 21113050
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||||||| || |||||| |||  ||||||||||||||||||| || ||||||||| |||||||    
T  21113119 ttataaacaaaaatctacattttatattcgtttaattaatgatgtatattatttttattatataccacat 21113050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 716 - 794
Target Start/End: Complemental strand, 23004059 - 23003976
Alignment:
Q  716 tttaattaatgatgtatatgatctttattatagaccacat---tta-atgatgaatgaatctaaaatgtt-atttttgcttata 794  Q
    ||||||||||||||||||||||||||||||||||| ||||   |||  | ||||| |||||||||||||| |||||||||||||    
T  23004059 tttaattaatgatgtatatgatctttattatagactacatacattatttaatgaacgaatctaaaatgttaatttttgcttata 23003976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 681 - 818
Target Start/End: Complemental strand, 53176440 - 53176298
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 776  Q
    |||| |||||| ||||||||||||||||||||| ||| | |||||| ||||| |||||||| ||||| |  ||||  |     | |||||||||| ||||    
T  53176440 cactattataagcaaaaatttatattttagattcattcagttaatgttgtatttgatcttttttataaataacatacatcatttaatgaatgaatataaa 53176341  T
Q  777 atgtt-atttttgcttataattgtgagcggagggtgtacaaac 818  Q
    ||||| |||||| |||||||| |||| ||||||||||| ||||    
T  53176340 atgttaatttttacttataatagtgatcggagggtgtaaaaac 53176298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 687 - 813
Target Start/End: Complemental strand, 54106601 - 54106470
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat---ttaatga-tgaatgaatctaaaatgt-t 781  Q
    ||||| ||||||||||| ||||||||| ||| ||| |||||||||| ||||||||||| ||||| ||||   | | | | |||||||||||||||| |      
T  54106601 tataagcaaaaatttatgttttagattcattcaataaatgatgtatgtgatctttattgtagacaacatacatcatttattgaatgaatctaaaatatga 54106502  T
Q  782 atttttgcttataattgtgagcggagggtgta 813  Q
    ||||||||||||| |||||| ||||| |||||    
T  54106501 atttttgcttatatttgtgaccggagagtgta 54106470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 686 - 755
Target Start/End: Complemental strand, 21649462 - 21649391
Alignment:
Q  686 ttataaacaaaaatttatattttagatt--tatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| ||||| | ||||||||| |||  |||| ||||||||||||| |||||||||||||||||||||||    
T  21649462 ttataagcaaaattctatattttaaattcatattcaattaatgatgtacatgatctttattatagaccacat 21649391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 695 - 747
Target Start/End: Original strand, 24448687 - 24448739
Alignment:
Q  695 aaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    ||||||||||||||| ||| ||||||||||||||||||||  |||||||||||    
T  24448687 aaaatttatattttatattcatttaattaatgatgtatatagtctttattata 24448739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 681 - 749
Target Start/End: Complemental strand, 35151793 - 35151725
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattataga 749  Q
    |||| |||||||||||| ||| ||||||||||| ||| |||| |||||||||||  |||||||||||||    
T  35151793 cactattataaacaaaactttgtattttagattcattcaattgatgatgtatatagtctttattataga 35151725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 693 - 813
Target Start/End: Original strand, 39533776 - 39533901
Alignment:
Q  693 caaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt-attttt 787  Q
    |||||||| | |||||||||| ||||| | |||||||||||| |||||||||||||| |||||  |     | |||||| ||||||||||||| ||||||    
T  39533776 caaaaattaacattttagattcatttattaaatgatgtatataatctttattatagatcacatacatcatttaatgaataaatctaaaatgttgattttt 39533875  T
Q  788 gcttataattgtgagcggagggtgta 813  Q
    |||||||||  ||| || ||||||||    
T  39533876 gcttataataatgaccgtagggtgta 39533901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 687 - 755
Target Start/End: Complemental strand, 44239910 - 44239842
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||||||||||| ||||| ||| ||  ||| |||||||||||||||||||| ||||||| ||||    
T  44239910 tataaacaaaaatttatgttttaaattcatccaataaatgatgtatatgatctttagtatagacaacat 44239842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 681 - 744
Target Start/End: Original strand, 51829180 - 51829244
Alignment:
Q  681 cactgttataaaca-aaaatttatattttagatttatttaattaatgatgtatatgatctttatt 744  Q
    |||||||||||| | ||||| || |||||| ||||||||||||||||||||||| ||||||||||    
T  51829180 cactgttataaaaataaaatctacattttaaatttatttaattaatgatgtatacgatctttatt 51829244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 704 - 755
Target Start/End: Complemental strand, 8826974 - 8826923
Alignment:
Q  704 attttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||| ||||| ||||||||||||||| ||||||||||||| |||||    
T  8826974 attttagattcatttatttaatgatgtatatggtctttattatagatcacat 8826923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 10308243 - 10308322
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatt-----tatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||||| ||||| |||||||||||||||      ||| ||||||||||||||||  |||||||||||||||||||    
T  10308243 cactgttataagcaaaactttatattttagattcattcaattaaattaatgatgtatatagtctttattatagaccacat 10308322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 681 - 748
Target Start/End: Original strand, 41346475 - 41346542
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatag 748  Q
    |||| ||||||  |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||||    
T  41346475 cactattataagtaaaaatttatattttagattcatttatttaatgatgcacatggtctttattatag 41346542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 747
Target Start/End: Complemental strand, 12070125 - 12070059
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||||||||||  |||||  ||||||||||||||||||||||||| || ||||| || |||||||||    
T  12070125 cactgttataagtaaaaaactatattttagatttatttaattaataatatatataatatttattata 12070059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 16468336 - 16468262
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| ||||||  |||||| || |||||||||||||| | ||||||||  | |||||||||||||||||||||||    
T  16468336 cactattataataaaaaatctacattttagatttattcatttaatgattcacatgatctttattatagaccacat 16468262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 762 - 811
Target Start/End: Original strand, 23568473 - 23568523
Alignment:
Q  762 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtg 811  Q
    ||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  23568473 atgaatgaatctaaaatgttagtttttgcttataatagtgaccggagggtg 23568523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 686 - 748
Target Start/End: Original strand, 35425265 - 35425327
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatag 748  Q
    |||||| ||||| |||| |||||||||| ||| | ||||||||||||||| ||||||||||||    
T  35425265 ttataagcaaaactttaaattttagattcattcatttaatgatgtatatggtctttattatag 35425327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 36072578 - 36072652
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||| |||  |||||||||| ||| |||| |||||||||||| |||||||||||||| ||||    
T  36072578 cactattataagcaaaattttgcattttagattcattcaatttatgatgtatatggtctttattatagactacat 36072652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 735
Target Start/End: Original strand, 38539486 - 38539540
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatg 735  Q
    |||| |||||| ||||||||||||||||| ||||||| ||| |||||||||||||    
T  38539486 cactattataagcaaaaatttatattttaaatttattcaataaatgatgtatatg 38539540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 686 - 755
Target Start/End: Original strand, 46803420 - 46803490
Alignment:
Q  686 ttataaacaaaaatt-tatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||| ||||||| ||||||||||||| ||| ||||||| ||||||||  ||||||||||| |||||||    
T  46803420 ttataaataaaaattatatattttagattcattaaattaattatgtatatagtctttattataaaccacat 46803490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 49481888 - 49481962
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||| |||| |||||||||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  49481888 cactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacat 49481962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 681 - 726
Target Start/End: Complemental strand, 16203472 - 16203427
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatg 726  Q
    |||| ||||||||||||||||| |||||||||||||||| ||||||    
T  16203472 cactattataaacaaaaatttacattttagatttatttatttaatg 16203427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 695 - 752
Target Start/End: Original strand, 24133620 - 24133677
Alignment:
Q  695 aaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    ||||| |||||||||||| |||| |||||||||| ||||| |||||||||||| ||||    
T  24133620 aaaatctatattttagatatattcaattaatgatatatataatctttattataaacca 24133677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 686 - 747
Target Start/End: Complemental strand, 40575966 - 40575905
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    ||||||| || |||| | |||||||||||||| ||||||| ||||||||||| |||||||||    
T  40575966 ttataaataataattaacattttagatttattcaattaataatgtatatgatttttattata 40575905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 706 - 747
Target Start/End: Complemental strand, 40881534 - 40881493
Alignment:
Q  706 tttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||||||| ||| |||||||||||||||||||||||||||||    
T  40881534 tttagattcattcaattaatgatgtatatgatctttattata 40881493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 694 - 747
Target Start/End: Original strand, 54931840 - 54931893
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||||| ||||||||| ||||||| ||||||| ||||||||||| |||||||||    
T  54931840 aaaaatctatattttaaatttattcaattaattatgtatatgatttttattata 54931893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 762 - 813
Target Start/End: Complemental strand, 14451004 - 14450952
Alignment:
Q  762 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgta 813  Q
    |||||||||||||||||||  ||||||||||||||| |||| |||||||||||    
T  14451004 atgaatgaatctaaaatgtagatttttgcttataatagtgatcggagggtgta 14450952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 681 - 737
Target Start/End: Complemental strand, 19597065 - 19597009
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgat 737  Q
    |||| |||||||||||||||||||| ||||||| ||| || ||||||||||| ||||    
T  19597065 cactattataaacaaaaatttatatattagattaattcaactaatgatgtatgtgat 19597009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 681 - 753
Target Start/End: Original strand, 25138691 - 25138763
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccac 753  Q
    |||| |||||| ||||| ||| |||| |||||| ||  ||||||||||||||||  |||||||||||||||||    
T  25138691 cactattataagcaaaactttgtattatagattcatgcaattaatgatgtatattgtctttattatagaccac 25138763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 701 - 753
Target Start/End: Original strand, 30035209 - 30035261
Alignment:
Q  701 tatattttagatttatttaattaatgatgtatatgatctttattatagaccac 753  Q
    ||||||||||| | ||||||||||  |||||||||||||||||||| ||||||    
T  30035209 tatattttagactcatttaattaagtatgtatatgatctttattatcgaccac 30035261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 762 - 813
Target Start/End: Complemental strand, 54713145 - 54713093
Alignment:
Q  762 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgta 813  Q
    ||||||||||||||||||| | |||||||||||||| |||| |||||||||||    
T  54713145 atgaatgaatctaaaatgtaaatttttgcttataatagtgaccggagggtgta 54713093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 687 - 750
Target Start/End: Original strand, 4370414 - 4370477
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac 750  Q
    ||||| |||||||  |||||||||||| ||| ||| ||||||||||||| |||||||| |||||    
T  4370414 tataagcaaaaatccatattttagattcattcaataaatgatgtatatggtctttattgtagac 4370477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 681 - 752
Target Start/End: Original strand, 8826873 - 8826944
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    |||| |||||||||||||||| ||||||| ||||||| | | |||||||||| |||||| || || ||||||    
T  8826873 cactattataaacaaaaatttgtattttaaatttattcattaaatgatgtatgtgatctataataaagacca 8826944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 686 - 737
Target Start/End: Original strand, 19595430 - 19595481
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgat 737  Q
    ||||||| | |||||||||||||||||| ||||||| |||||||||| ||||    
T  19595430 ttataaatagaaatttatattttagattcatttaataaatgatgtatgtgat 19595481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 755
Target Start/End: Original strand, 51232302 - 51232353
Alignment:
Q  704 attttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||| || ||||| ||||||||| | |||||||||||||||||||||||    
T  51232302 attttaggttcatttatttaatgatgcacatgatctttattatagaccacat 51232353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 735
Target Start/End: Original strand, 3094275 - 3094329
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatg 735  Q
    |||| |||||||||||||||||| ||||| ||| ||| ||| |||||||||||||    
T  3094275 cactattataaacaaaaatttattttttatattcattcaataaatgatgtatatg 3094329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 739
Target Start/End: Complemental strand, 6462844 - 6462786
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatct 739  Q
    |||| |||||||||||| ||||| ||||||||| ||| ||| |||||||||| ||||||    
T  6462844 cactattataaacaaaattttattttttagattcattcaataaatgatgtatgtgatct 6462786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 14450965 - 14451039
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||||| || |||||||||| ||| | ||||||||| | ||| ||||||||||||| |||||    
T  14450965 cactattataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattatagatcacat 14451039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 705 - 755
Target Start/End: Original strand, 37175464 - 37175514
Alignment:
Q  705 ttttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| ||||||||||||||||||||| |||| | |||||| ||||||||    
T  37175464 ttttaggtttatttaattaatgatgtatgtgatttatattatggaccacat 37175514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 686 - 747
Target Start/End: Complemental strand, 1829674 - 1829613
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    ||||||||| |||  || |||||||||| ||||||| ||||||||||||| ||| |||||||    
T  1829674 ttataaacataaaactacattttagattcatttaataaatgatgtatatgttctatattata 1829613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 687 - 732
Target Start/End: Original strand, 3504091 - 3504136
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtat 732  Q
    |||||||||||||| || ||||||||| ||| ||||||||||||||    
T  3504091 tataaacaaaaattcattttttagattcattcaattaatgatgtat 3504136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 762 - 810
Target Start/End: Complemental strand, 19878194 - 19878145
Alignment:
Q  762 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggt 810  Q
    |||||||||||||||||||| ||||||||||||| | |||| ||||||||    
T  19878194 atgaatgaatctaaaatgttaatttttgcttatattagtgaccggagggt 19878145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 704 - 753
Target Start/End: Complemental strand, 26920781 - 26920732
Alignment:
Q  704 attttagatttatttaattaatgatgtatatgatctttattatagaccac 753  Q
    |||||||||| ||| ||||||||||||| ||  |||||||||||||||||    
T  26920781 attttagattcattcaattaatgatgtacatcgtctttattatagaccac 26920732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 686 - 747
Target Start/End: Original strand, 27537069 - 27537130
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||||| |||||||||| |||||||||| ||| | | |||||||||  ||||||||||||||    
T  27537069 ttataagcaaaaatttacattttagattcattcattaaatgatgtaagtgatctttattata 27537130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 687 - 744
Target Start/End: Complemental strand, 33558923 - 33558866
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttatt 744  Q
    ||||| ||||||| ||| ||||||||||||| ||| |||||||||| || ||||||||    
T  33558923 tataagcaaaaatatatgttttagatttattcaataaatgatgtatgtggtctttatt 33558866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 699 - 752
Target Start/End: Complemental strand, 41654614 - 41654561
Alignment:
Q  699 tttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    |||| |||||||||| ||| |  |||||||||||||||| ||||||||||||||    
T  41654614 tttacattttagattcattaacgtaatgatgtatatgatatttattatagacca 41654561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 686 - 755
Target Start/End: Original strand, 47397893 - 47397962
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||| || ||||| ||||||||||||| ||| ||| || ||| |||||| ||| |||||||||||    
T  47397893 ttataaacagaattttattttttagatttattcaataaataatatatgtgatctatataatagaccacat 47397962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 687 - 732
Target Start/End: Original strand, 52674830 - 52674875
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtat 732  Q
    ||||||||||||||||||||||| ||| ||||||| ||| ||||||    
T  52674830 tataaacaaaaatttatattttaaattcatttaataaattatgtat 52674875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 687 - 732
Target Start/End: Original strand, 54508183 - 54508228
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtat 732  Q
    ||||| ||||||||||||||||||||| ||| ||| ||||||||||    
T  54508183 tataagcaaaaatttatattttagattcattcaataaatgatgtat 54508228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 51; Significance: 1e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 690 - 796
Target Start/End: Complemental strand, 89721 - 89610
Alignment:
Q  690 aaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt-att 784  Q
    ||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||| |||||  |     | ||||| |||||||||||||| |||    
T  89721 aaacaaaaatttacattttaaatttattcaattaatgatgtatatgatctttattatagatcacatacatcatttaatgaaagaatctaaaatgttgatt 89622  T
Q  785 tttgcttataat 796  Q
    ||||||||||||    
T  89621 tttgcttataat 89610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 1e-19; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 10117102 - 10117028
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| |||||||||| |||||||||| ||| ||||||||||||||||||| |||||||||||||||||    
T  10117102 cactattataagcaaaaatttacattttagattcattcaattaatgatgtatatgatatttattatagaccacat 10117028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 682 - 755
Target Start/End: Original strand, 18603467 - 18603540
Alignment:
Q  682 actgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||||||||| || | |||||||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  18603467 actgttataaacaaaagttcacattttagattcatttaattaataatgtatatgatctttattatataccacat 18603540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 681 - 750
Target Start/End: Complemental strand, 45045509 - 45045440
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac 750  Q
    |||| |||||||||||||| ||||||||||||| ||| ||||||||||||||||| ||||||||||||||    
T  45045509 cactattataaacaaaaatctatattttagattcattcaattaatgatgtatatggtctttattatagac 45045440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 681 - 813
Target Start/End: Original strand, 10934611 - 10934748
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacatttaa----tgatgaatgaatctaaa 776  Q
    |||| |||||| ||||||  ||||||||| ||| |||||||||||||||||| |  |||||||| ||||||||||  |     | |||||||||||||||    
T  10934611 cactattataagcaaaaaactatattttacattcatttaattaatgatgtatgtagtctttattgtagaccacatacatcatttaatgaatgaatctaaa 10934710  T
Q  777 atgtt-atttttgcttataattgtgagcggagggtgta 813  Q
    ||||| ||||||||||||||| |||| |||||||||||    
T  10934711 atgttgatttttgcttataatagtgaccggagggtgta 10934748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 694 - 755
Target Start/End: Original strand, 3225801 - 3225862
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| || |||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  3225801 aaaaatctacattttaaatttattcaattaatgatgtatatgatctttattatagaccacat 3225862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 694 - 751
Target Start/End: Complemental strand, 9015935 - 9015878
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacc 751  Q
    |||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  9015935 aaaaatctatattttagattcattcaattaatgatgtatatgatctttattatagacc 9015878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 687 - 755
Target Start/End: Complemental strand, 23575091 - 23575023
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||||||||| |||| |||||||||||| |||| |||||||||| ||||||||||| |||||||    
T  23575091 tataaacaaaaatttgtattgtagatttatttatttaacgatgtatatggtctttattatataccacat 23575023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 686 - 752
Target Start/End: Original strand, 25267988 - 25268053
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    |||||||||||||| || |||||||||| |||||||||||||| |||||||||||||||||| ||||    
T  25267988 ttataaacaaaaatctacattttagattcatttaattaatgat-tatatgatctttattataaacca 25268053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 686 - 755
Target Start/End: Complemental strand, 2805940 - 2805871
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||| |||| |||| |||||| ||| ||| ||||||| |||||||||||||||||||||||||||||    
T  2805940 ttataaataaaattttacattttaaattcattcaattaataatgtatatgatctttattatagaccacat 2805871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 7258717 - 7258643
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| ||||||  |||| |||| |||||||||| ||| ||||||||||| ||||| |||||||||||||||||||    
T  7258717 cactattataagtaaaattttacattttagattcattcaattaatgatgcatatggtctttattatagaccacat 7258643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 41753890 - 41753816
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| ||||||||||||||| |||||||||||| ||| ||||||||||||  ||  ||| |||||||||||||||    
T  41753890 cactattataaacaaaaattaatattttagattcattcaattaatgatgttcattgtctgtattatagaccacat 41753816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 704 - 813
Target Start/End: Complemental strand, 24287894 - 24287780
Alignment:
Q  704 attttagatttatttaattaatgatgtatatgatctttattatagacc----acatttaatgatgaatgaatctaaaatg-ttatttttgcttataattg 798  Q
    |||||||||||||| | ||||||||||||||| |||||||||||||||    ||||    | ||||||||||||||||||   | ||||||||||||| |    
T  24287894 attttagatttattcagttaatgatgtatatggtctttattatagaccatatacatcatttaatgaatgaatctaaaatgcaaagttttgcttataatag 24287795  T
Q  799 tgagcggagggtgta 813  Q
    ||| |||||||||||    
T  24287794 tgaccggagggtgta 24287780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 681 - 801
Target Start/End: Complemental strand, 5888468 - 5888343
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 776  Q
    |||| |||||| ||||||| ||  || |||||| ||| ||||||||||||||||| |||||||||||||| ||||  |     | |||||||||||||||    
T  5888468 cactattataagcaaaaatctactttgtagattcattcaattaatgatgtatatggtctttattatagacaacatacatcatttaatgaatgaatctaaa 5888369  T
Q  777 atgtt-atttttgcttataattgtga 801  Q
    | ||| ||||||||||||||| ||||    
T  5888368 acgttaatttttgcttataatagtga 5888343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 686 - 815
Target Start/End: Complemental strand, 13080215 - 13080082
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt 781  Q
    |||||||||||||| || |||||| ||| ||| |||||||||||||| || ||||||||| |||| ||||  |     | ||||||||||||||||||||    
T  13080215 ttataaacaaaaatctacattttacattcattgaattaatgatgtatgtggtctttattaaagactacatacatcatttaatgaatgaatctaaaatgtt 13080116  T
Q  782 atttttgcttataattgtgagcggagggtgtaca 815  Q
      ||||| ||||||| ||||   |||||||||||    
T  13080115 gattttggttataatagtgacaagagggtgtaca 13080082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 695 - 747
Target Start/End: Original strand, 35874487 - 35874539
Alignment:
Q  695 aaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    ||||||||||||||| ||| ||||||||||||||||||||  |||||||||||    
T  35874487 aaaatttatattttatattcatttaattaatgatgtatatagtctttattata 35874539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 686 - 806
Target Start/End: Complemental strand, 34580699 - 34580574
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat--ttaa--tgatgaatgaatctaaaatg-t 780  Q
    |||||| ||||| ||| ||||||| |||  || ||||||||||||||||| ||||||||||| |||||||   |||  | ||||||||| |||||||| |    
T  34580699 ttataagcaaaactttgtattttatattctttcaattaatgatgtatatggtctttattataaaccacatacataatttaatgaatgaacctaaaatgat 34580600  T
Q  781 tatttttgcttataattgtgagcgga 806  Q
    | |||||||||||||| |||| ||||    
T  34580599 tttttttgcttataatagtgaccgga 34580574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 23627674 - 23627748
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||||| | ||||||||||||||| | ||||||||||| ||  |||||||| ||||||||||    
T  23627674 cactattataagcaaaaatctgtattttagatttattcatttaatgatgtacatagtctttattttagaccacat 23627748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 27518447 - 27518373
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||||||||||| || |||||||||| ||| | ||||||||| | ||  |||||||||||||||||||    
T  27518447 cactattataaacaaaaatctacattttagattcattcatttaatgatgcacatagtctttattatagaccacat 27518373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 36058902 - 36058829
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||||||||||| | || |||| ||||||| ||||||| |||||| |||||||||||||||| |||||    
T  36058902 cactattataaacaaaaatat-taatttaaatttattcaattaataatgtatttgatctttattatagatcacat 36058829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 704 - 749
Target Start/End: Complemental strand, 468025 - 467980
Alignment:
Q  704 attttagatttatttaattaatgatgtatatgatctttattataga 749  Q
    ||||||||||||||||||||||||| |||||  |||||||||||||    
T  468025 attttagatttatttaattaatgatatatatagtctttattataga 467980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 686 - 755
Target Start/End: Original strand, 24017731 - 24017800
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| ||||||||   |||||| |||  || ||||||||||||||||||||||||||| |||||||||    
T  24017731 ttataagcaaaaattaccattttaaattccttcaattaatgatgtatatgatctttattacagaccacat 24017800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 686 - 755
Target Start/End: Complemental strand, 33385298 - 33385229
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| |||||  ||| |||||||||| ||| |||||||||| ||||| || |||||||||||||||||    
T  33385298 ttataagcaaaaccttacattttagattcattcaattaatgatatatataatatttattatagaccacat 33385229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 699 - 747
Target Start/End: Complemental strand, 17923779 - 17923731
Alignment:
Q  699 tttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||| |||||||||||||| |||||||||||||| ||||| ||||||||    
T  17923779 tttacattttagatttattcaattaatgatgtatttgatcattattata 17923731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 681 - 752
Target Start/End: Complemental strand, 2382718 - 2382647
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    ||||||||||| ||||| |||  |||| ||||  ||| | |||||||| |||||||||||||||||||||||    
T  2382718 cactgttataagcaaaactttgcatttcagatacattcatttaatgatatatatgatctttattatagacca 2382647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 681 - 752
Target Start/End: Complemental strand, 13496567 - 13496496
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    |||| |||||| |||||||||| |||||| ||| ||| | ||||||||| | ||| ||||||||||||||||    
T  13496567 cactattataagcaaaaatttacattttaaattcattcatttaatgatgcacatggtctttattatagacca 13496496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 755
Target Start/End: Original strand, 36916614 - 36916665
Alignment:
Q  704 attttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||||||| |||||||||| ||| |  |||||||||||||||||||    
T  36916614 attttagatttattcaattaatgatatatttagtctttattatagaccacat 36916665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 686 - 753
Target Start/End: Complemental strand, 40640405 - 40640338
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccac 753  Q
    |||||| ||||| |||  |||||||||| ||| ||||||||||||| ||  |||||||||||||||||    
T  40640405 ttataagcaaaactttgcattttagattcattcaattaatgatgtacatagtctttattatagaccac 40640338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 731
Target Start/End: Original strand, 3444630 - 3444680
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgta 731  Q
    |||| ||||||||||||||||| |||||| ||| ||| |||||||||||||    
T  3444630 cactattataaacaaaaatttacattttatattcattcaattaatgatgta 3444680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 6614817 - 6614743
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| ||||||  |||||| ||||||||  ||||||| ||||||| || |||||  |||||||||||||||||||    
T  6614817 cactattataagtaaaaatctatattttctatttattcaattaattatatatattgtctttattatagaccacat 6614743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 13290043 - 13290117
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| |||||| ||| ||||| |||| ||| |||||||  |||||||| |||| ||||||||||||||    
T  13290043 cactattataagcaaaaaattacattttggattcattcaattaatagtgtatatggtcttcattatagaccacat 13290117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 705 - 755
Target Start/End: Complemental strand, 29916239 - 29916189
Alignment:
Q  705 ttttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||| ||| |||| |||||||||||||||| |||||||||| ||||    
T  29916239 ttttagattcattcaattgatgatgtatatgatctatattatagactacat 29916189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 33070297 - 33070223
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||| |||  |||||||||| ||| | |||||| |||||||| |||||||||||||| ||||    
T  33070297 cactattataagcaaaattttgcattttagattcattcatttaatggtgtatatggtctttattatagactacat 33070223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 763 - 815
Target Start/End: Original strand, 10117064 - 10117117
Alignment:
Q  763 tgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgtaca 815  Q
    |||||||||||||||||| | |||||||||||||| |||| |||| ||||||||    
T  10117064 tgaatgaatctaaaatgtaaatttttgcttataatagtgaccggatggtgtaca 10117117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 681 - 734
Target Start/End: Original strand, 10679140 - 10679193
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatat 734  Q
    |||| ||||| ||||||||||| |||||| ||| |||||||||||||| |||||    
T  10679140 cactattatagacaaaaatttacattttacattcatttaattaatgatttatat 10679193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 686 - 755
Target Start/End: Complemental strand, 11335694 - 11335625
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| ||||| |||  |||||||||| ||| ||||||| ||||||||||||||| ||| ||| |||||    
T  11335694 ttataagcaaaactttgcattttagattcattcaattaataatgtatatgatctttgttagagagcacat 11335625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 694 - 747
Target Start/End: Original strand, 13211260 - 13211313
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||||||||| ||||||||  |||||||||||||| ||| || |||||||||||    
T  13211260 aaaaatttattttttagatacatttaattaatgatatatgtggtctttattata 13211313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 686 - 735
Target Start/End: Original strand, 20269777 - 20269826
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatg 735  Q
    ||||||||||||| |||| |||||| |||||| ||| |||||||||||||    
T  20269777 ttataaacaaaaaattattttttaggtttattcaataaatgatgtatatg 20269826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 686 - 735
Target Start/End: Original strand, 21056406 - 21056455
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatg 735  Q
    ||||||||||||| |||| |||||| |||||| ||| |||||||||||||    
T  21056406 ttataaacaaaaaattattttttaggtttattcaataaatgatgtatatg 21056455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 762 - 814
Target Start/End: Original strand, 27518408 - 27518461
Alignment:
Q  762 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgtac 814  Q
    |||||||||||||||||||  ||||||| ||||||| |||| ||||||||||||    
T  27518408 atgaatgaatctaaaatgtagatttttgtttataatagtgaccggagggtgtac 27518461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 1e-19; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 681 - 747
Target Start/End: Complemental strand, 11746360 - 11746294
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||||||||||| ||||||||| |||||||||| ||| |||||||||||||||||||||||||||||    
T  11746360 cactgttataaaaaaaaatttacattttagattcattcaattaatgatgtatatgatctttattata 11746294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 12383721 - 12383647
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||||||||||| || |||||||||| ||| ||||||||||||| |||||||||||||||||| ||||    
T  12383721 cactattataaacaaaaatctacattttagattaattcaattaatgatgtacatgatctttattatagactacat 12383647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 20704155 - 20704081
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||||||||| ||||| |||| ||| || ||||||| ||||||||||||||||| |||||||||||||||||||    
T  20704155 cactgttataatcaaaattttacattctaaatttattcaattaatgatgtatatggtctttattatagaccacat 20704081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 688 - 755
Target Start/End: Complemental strand, 17214320 - 17214253
Alignment:
Q  688 ataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||||||||||||||||||| ||| ||||||||||| |||||| || ||||||| |||||||||||    
T  17214320 ataaacaaaaatttatattttatattcatttaattaattatgtatgtggtctttataatagaccacat 17214253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 693 - 755
Target Start/End: Original strand, 2827579 - 2827641
Alignment:
Q  693 caaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    ||||| |||| |||||||||| ||||| |||||||||||||||| ||||||||||||||||||    
T  2827579 caaaattttacattttagattcatttatttaatgatgtatatgaactttattatagaccacat 2827641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 13281542 - 13281616
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||||| || |||||||||| ||| ||||||||||||||||||||||| |||||| ||||||    
T  13281542 cactattataagcaaaaatctagattttagattcattcaattaatgatgtatatgatctttcttatagtccacat 13281616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 681 - 796
Target Start/End: Original strand, 13506842 - 13506961
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca----catttaatgatgaatgaatctaaa 776  Q
    |||| |||||| ||||| |||| || ||| ||| |||||||||||||||||||||||||||||||||||| |    |||    | |||||| ||| ||||    
T  13506842 cactattataagcaaaagtttacatcttaaattcatttaattaatgatgtatatgatctttattatagactagatgcatcatttaatgaataaatttaaa 13506941  T
Q  777 atgttatttttgcttataat 796  Q
    ||||||||||||||||||||    
T  13506942 atgttatttttgcttataat 13506961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 687 - 816
Target Start/End: Complemental strand, 8146075 - 8145940
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat------ttaatgatgaatgaatctaaaatgt 780  Q
    ||||| |||||| ||| |||||||||| ||| | ||||||||||| ||| |||||||||||||||||||      ||||  ||||||||| |||||||||    
T  8146075 tataagcaaaaaattacattttagattcattcatttaatgatgtacatggtctttattatagaccacatacatcattaa--atgaatgaacctaaaatgt 8145978  T
Q  781 --tatttttgcttataattgtgagcggagggtgtacaa 816  Q
      | |||||||||||| | |||| ||||||||||||||    
T  8145977 agtttttttgcttatattagtgaccggagggtgtacaa 8145940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 688 - 754
Target Start/End: Original strand, 6263365 - 6263432
Alignment:
Q  688 ataaacaaaaatttatattttagatttatttaattaa-tgatgtatatgatctttattatagaccaca 754  Q
    |||| |||||| |||||||||||||| ||| |||||| ||||||||||||||||||||||| ||||||    
T  6263365 ataagcaaaaaattatattttagattaattcaattaaatgatgtatatgatctttattatataccaca 6263432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 681 - 752
Target Start/End: Original strand, 11637178 - 11637249
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    |||| |||||| |||||  ||| |||||| ||| ||| ||||||||||||||||||||||||||||||||||    
T  11637178 cactattataagcaaaacattacattttaaattcattcaattaatgatgtatatgatctttattatagacca 11637249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 686 - 801
Target Start/End: Complemental strand, 14218324 - 14218204
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca----catttaatgatgaatgaatctaaaatgtt 781  Q
    |||||| || |||| || |||||| ||||||||||||||||||||||||| ||||||||||| || |    ||||   | || |||||||||||||| ||    
T  14218324 ttataagcataaatctacattttaaatttatttaattaatgatgtatatggtctttattatatactatattcattatttaataaatgaatctaaaatatt 14218225  T
Q  782 -atttttgcttataattgtga 801  Q
     ||||||||||||||||||||    
T  14218224 gatttttgcttataattgtga 14218204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 682 - 752
Target Start/End: Original strand, 3102148 - 3102217
Alignment:
Q  682 actgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    |||||||||| |||||||   || ||||||||||||||||||||||||||||| |||||||||||| ||||    
T  3102148 actgttataagcaaaaatcattactttagatttatttaattaatgatgtatat-atctttattatatacca 3102217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 681 - 747
Target Start/End: Complemental strand, 8449708 - 8449642
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||| |||||| |||||||| |||||||||||| ||| ||||||||||| |||||||||| ||||||    
T  8449708 cactattataagcaaaaattaatattttagattcattcaattaatgatgcatatgatcttgattata 8449642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 681 - 747
Target Start/End: Complemental strand, 8458512 - 8458446
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||| |||||| |||||||| |||||||||||| ||| ||||||||||| |||||||||| ||||||    
T  8458512 cactattataagcaaaaattaatattttagattcattcaattaatgatgcatatgatcttgattata 8458446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 681 - 796
Target Start/End: Complemental strand, 12218579 - 12218457
Alignment:
Q  681 cactgttataaacaaaaatttatattt--tagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatcta 774  Q
    |||| |||||||||||||| ||||| |  |||||| ||| ||||||||||||||| |||||||||||||||  |||| ||     | |||||||||| ||    
T  12218579 cactattataaacaaaaatatatatatattagattcattcaattaatgatgtataagatctttattatagattacatatatcatttaatgaatgaatata 12218480  T
Q  775 aaatgtt-atttttgcttataat 796  Q
    ||||||| |||||||||||||||    
T  12218479 aaatgttgatttttgcttataat 12218457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 681 - 752
Target Start/End: Complemental strand, 28555079 - 28555008
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    |||| |||||| ||||||| || |||||||||| ||||| ||||||||| | ||| ||||||||||||||||    
T  28555079 cactattataagcaaaaatctacattttagattcatttatttaatgatgcacatggtctttattatagacca 28555008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 31398358 - 31398284
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||| |||| |||||||||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  31398358 cactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacat 31398284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 686 - 755
Target Start/End: Complemental strand, 3199845 - 3199776
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| |||||| ||| |||||| ||| ||| |||||||  |||||||||||||||||||| |||||||    
T  3199845 ttataagcaaaaacttacattttatattcattcaattaatagtgtatatgatctttattataaaccacat 3199776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 694 - 755
Target Start/End: Complemental strand, 5571640 - 5571579
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| ||| ||||||||||| ||| ||| |||||||||||||| |||||||| |||||||||    
T  5571640 aaaactttttattttagattaattcaatcaatgatgtatatgacctttattacagaccacat 5571579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 687 - 732
Target Start/End: Complemental strand, 13277148 - 13277103
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtat 732  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||||||    
T  13277148 tataaacaaaaatttatattttagattcattcaataaatgatgtat 13277103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 686 - 755
Target Start/End: Complemental strand, 16465633 - 16465564
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||||||||||||||||| || ||||||| ||||||| ||||| | |||||||| ||| ||||    
T  16465633 ttattaacaaaaatttatattttaggttcatttaataaatgatgcatatggtatttattatggactacat 16465564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 694 - 755
Target Start/End: Complemental strand, 31158961 - 31158901
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| || |||||||||| ||| |||||||||| || |||||||||||||||||||||||    
T  31158961 aaaaatctacattttagattcattaaattaatgatata-atgatctttattatagaccacat 31158901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 762 - 806
Target Start/End: Complemental strand, 14031716 - 14031672
Alignment:
Q  762 atgaatgaatctaaaatgttatttttgcttataattgtgagcgga 806  Q
    |||||||||||||| |||||||||||||||||||| |||| ||||    
T  14031716 atgaatgaatctaagatgttatttttgcttataatagtgaccgga 14031672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 762 - 814
Target Start/End: Complemental strand, 15517137 - 15517085
Alignment:
Q  762 atgaatgaatctaaaatgttatttttgcttataattgtgagcggagggtgtac 814  Q
    |||||||||||||||||  | |||||||||||||| |||| ||||||||||||    
T  15517137 atgaatgaatctaaaattatgtttttgcttataatagtgaccggagggtgtac 15517085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 687 - 747
Target Start/End: Complemental strand, 21506589 - 21506529
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    ||||| ||||||||||  ||||||||  ||| |||||||||||||| ||||||||||||||    
T  21506589 tataagcaaaaatttaatttttagatacattcaattaatgatgtatgtgatctttattata 21506529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 762 - 813
Target Start/End: Complemental strand, 26527237 - 26527185
Alignment:
Q  762 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgta 813  Q
    ||||||| |||||||||||| ||||||||||||||| |||| |||||||||||    
T  26527237 atgaatgtatctaaaatgttgatttttgcttataatagtgatcggagggtgta 26527185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 762 - 817
Target Start/End: Original strand, 31398319 - 31398375
Alignment:
Q  762 atgaatgaatctaaaatgttat-ttttgcttataattgtgagcggagggtgtacaaa 817  Q
    ||||||||||||||||||| |  ||||||||||||| |||| |||||||||||||||    
T  31398319 atgaatgaatctaaaatgtaaacttttgcttataatagtgaccggagggtgtacaaa 31398375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 686 - 734
Target Start/End: Complemental strand, 31761330 - 31761282
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatat 734  Q
    ||||||| |||| |||| ||||||||| |||||||||||||||||||||    
T  31761330 ttataaataaaagtttacattttagatgtatttaattaatgatgtatat 31761282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 762 - 814
Target Start/End: Complemental strand, 34379782 - 34379730
Alignment:
Q  762 atgaatgaatctaaaatgttatttttgcttataattgtgagcggagggtgtac 814  Q
    |||||||||||||||||  | |||||||||||||| |||| ||||||||||||    
T  34379782 atgaatgaatctaaaattatgtttttgcttataatagtgaccggagggtgtac 34379730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 687 - 750
Target Start/End: Original strand, 7158270 - 7158333
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac 750  Q
    ||||| ||||||| ||| ||||||||||||| ||| |||||||||| || |||||||| |||||    
T  7158270 tataagcaaaaatctatgttttagatttattcaataaatgatgtatgtggtctttattgtagac 7158333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 705 - 752
Target Start/End: Complemental strand, 10258412 - 10258365
Alignment:
Q  705 ttttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    ||||||||| ||| ||||||||||||||||| || |||||||||||||    
T  10258412 ttttagattcattcaattaatgatgtatatggtcattattatagacca 10258365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 681 - 752
Target Start/End: Complemental strand, 12383919 - 12383848
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    |||| |||||| ||||||| || |||||||| | ||| ||||||| ||||||||  ||||||||||||||||    
T  12383919 cactattataagcaaaaatctacattttagactcattcaattaattatgtatatattctttattatagacca 12383848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 762 - 808
Target Start/End: Original strand, 26527283 - 26527330
Alignment:
Q  762 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagg 808  Q
    |||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  26527283 atgaatgaatctaaaatgttaatttttgcttataatagtgaacggagg 26527330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 681 - 752
Target Start/End: Original strand, 34170086 - 34170157
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 752  Q
    |||| ||||||||||||||  | |||||||||| ||| | | |||||||||| |||||| ||||||||||||    
T  34170086 cactattataaacaaaaatcaacattttagattcattcattaaatgatgtatgtgatctatattatagacca 34170157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 6032974 - 6033048
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| ||||||  ||||||| |||||||||||| ||||||| ||| |||||| || |||||| ||||||| ||||    
T  6032974 cactattataagtaaaaattgatattttagattcatttaataaataatgtatgtggtctttaatatagactacat 6033048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 727
Target Start/End: Original strand, 6894822 - 6894868
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatga 727  Q
    |||| ||||||||||||||||| |||||||||| ||||||| |||||    
T  6894822 cactattataaacaaaaatttacattttagattcatttaatgaatga 6894868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 705 - 755
Target Start/End: Original strand, 10644296 - 10644346
Alignment:
Q  705 ttttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| ||||||||||||||||||||| ||||   |||||||||||||||    
T  10644296 ttttaggtttatttaattaatgatgtatgtgattcatattatagaccacat 10644346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 18097068 - 18097142
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||| |||| |||||||||| ||||| ||||||||| | ||  ||||||||||| |||||||    
T  18097068 cactattataagcaaaagtttacattttagattcatttatttaatgatgcacatagtctttattatataccacat 18097142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 30916962 - 30917036
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| |||||| ||| |||||| ||||||| |||||||| ||||| |  |||||||||||||| ||||    
T  30916962 cactattataagcaaaaaattacattttacatttattcaattaatggtgtattttgtctttattatagactacat 30917036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 32254953 - 32254879
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||| || |||||||||||| ||| | | |||||||||| || |||||||||||||| ||||    
T  32254953 cactattataagcaaaagttaatattttagattcattcattaaatgatgtatgtggtctttattatagactacat 32254879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 762 - 814
Target Start/End: Original strand, 6560750 - 6560803
Alignment:
Q  762 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgtac 814  Q
    ||||||||||||||||||| | |||||||||||| | |||| ||||||||||||    
T  6560750 atgaatgaatctaaaatgtaattttttgcttatattagtgaccggagggtgtac 6560803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 689 - 750
Target Start/End: Original strand, 7718400 - 7718461
Alignment:
Q  689 taaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac 750  Q
    |||||||||||||| |||||||||| ||||||| |||||| ||| |||| | ||||| ||||    
T  7718400 taaacaaaaatttacattttagattaatttaataaatgatatatgtgatttatattacagac 7718461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 694 - 747
Target Start/End: Complemental strand, 31714654 - 31714601
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    |||||| || ||||||| || ||| ||||||||||||||||||| |||||||||    
T  31714654 aaaaatctacattttaggttcattcaattaatgatgtatatgatatttattata 31714601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 694 - 755
Target Start/End: Original strand, 33053786 - 33053847
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||||| ||| ||||||||| ||| ||| |||||||||| ||||||||||| ||||| ||||    
T  33053786 aaaaatctatgttttagattcattcaataaatgatgtatgtgatctttattgtagacaacat 33053847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 49; Significance: 2e-18; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 686 - 810
Target Start/End: Complemental strand, 146095 - 145966
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatg-t 780  Q
    ||||||||||||||||  |||||||||| ||| ||||||||||||||||| |||||||| ||||||||||  |     | |||||||||||||||||| |    
T  146095 ttataaacaaaaatttgcattttagattcattcaattaatgatgtatatggtctttattttagaccacatacatcatttaatgaatgaatctaaaatgat 145996  T
Q  781 tatttttgcttataattgtgagcggagggt 810  Q
     ||||||| ||||||| |||| ||||||||    
T  145995 gatttttgtttataatagtgaccggagggt 145966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 686 - 747
Target Start/End: Original strand, 216286 - 216347
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 747  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  216286 ttatatacaaaaatttatattttaaattcatttaattaatgatgcatatgatctttattata 216347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 7789 - 7715
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||||| || |||||||||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  7789 cactattataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattatagaccacat 7715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 687 - 812
Target Start/End: Original strand, 24620 - 24750
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt- 781  Q
    ||||| |||||  |||||||||||||| ||| ||||||| | |||||| ||||||||||||||||||||  |     | ||||||||||||||||| ||     
T  24620 tataagcaaaacattatattttagattcattcaattaataacgtatattatctttattatagaccacatacatcatttaatgaatgaatctaaaatatta 24719  T
Q  782 atttttgcttataattgtgagcggagggtgt 812  Q
    ||||||||||||||| |||| ||||||||||    
T  24720 atttttgcttataatagtgaccggagggtgt 24750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 687 - 751
Target Start/End: Complemental strand, 40579 - 40515
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacc 751  Q
    ||||| |||||||  ||||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  40579 tataagcaaaaatcaatattttggatttattcaattaatgttgtatatgatctttattatagacc 40515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 39; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 2428 - 2502
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| |||||||||| || ||||||| ||| | ||||||||| | |||||||||||||||||||||||    
T  2428 cactattataagcaaaaatttacatcttagattcattcatttaatgatgcacatgatctttattatagaccacat 2502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 10083 - 10157
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| |||||||||| || ||||||| ||| | ||||||||| | |||||||||||||||||||||||    
T  10083 cactattataagcaaaaatttacatcttagattcattcatttaatgatgcacatgatctttattatagaccacat 10157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 686 - 756
Target Start/End: Complemental strand, 10694 - 10624
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacatt 756  Q
    ||||||||| || | ||||| ||||||||||| |||||||||| ||||||||  |||||||||||||||||    
T  10694 ttataaacataactctatatgttagatttattcaattaatgatatatatgattcttattatagaccacatt 10624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 755
Target Start/End: Original strand, 139304 - 139378
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||||| ||||||| ||| ||||| ||| ||| | ||||||||| | |||||||||||||||||||||||    
T  139304 cactattataagcaaaaatctattttttacattcattcatttaatgatgcacatgatctttattatagaccacat 139378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0631 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 687 - 744
Target Start/End: Original strand, 4361 - 4418
Alignment:
Q  687 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttatt 744  Q
    ||||| ||||| ||||||||||||||| ||| ||||||| | ||||||||||||||||    
T  4361 tataagcaaaactttatattttagattcattcaattaataacgtatatgatctttatt 4418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1476 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1476
Description:

Target: scaffold1476; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 706 - 749
Target Start/End: Original strand, 693 - 735
Alignment:
Q  706 tttagatttatttaattaatgatgtatatgatctttattataga 749  Q
    |||||||||||| ||||||||||||||||||| |||||||||||    
T  693 tttagatttattcaattaatgatgtatatgat-tttattataga 735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 4103 - 4029
Alignment:
Q  681 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| ||||||  |||||| ||||||||  ||||||| ||||||| || |||||  |||||||||||||||||||    
T  4103 cactattataagtaaaaatctatattttctatttattcaattaattatatatattgtctttattatagaccacat 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 686 - 732
Target Start/End: Complemental strand, 88981 - 88935
Alignment:
Q  686 ttataaacaaaaatttatattttagatttatttaattaatgatgtat 732  Q
    |||||||||||||| ||||||||| ||| ||| ||||||||||||||    
T  88981 ttataaacaaaaatctatattttatattcattcaattaatgatgtat 88935  T

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Target: scaffold0635 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 694 - 755
Target Start/End: Complemental strand, 5507 - 5446
Alignment:
Q  694 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 755  Q
    |||| |||| |||||||||| |||||||||||||||||| || | | || ||||||||||||    
T  5507 aaaattttacattttagattcatttaattaatgatgtatgtggtttataatatagaccacat 5446  T

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Target: scaffold0512 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 376 - 417
Target Start/End: Original strand, 2365 - 2406
Alignment:
Q  376 atgacacacccttatggaaaccacttgattcaaaagattttt 417  Q
    ||||||||||||| ||| ||| ||||||||||||||||||||    
T  2365 atgacacacccttttggcaactacttgattcaaaagattttt 2406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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