View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0821-Insertion-7 (Length: 426)
Name: NF0821-Insertion-7
Description: NF0821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0821-Insertion-7 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 370; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 8 - 426
Target Start/End: Complemental strand, 29039096 - 29038678
Alignment:
| Q |
8 |
ggtttagcctctaatgatagtaacaattttaaagttgtgcttattgaggcaaaatctcccaaattgatcaatggactagaatttcatattttctcatctg |
107 |
Q |
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| T |
29039096 |
ggtttagcctctaatgatagtaacaattttaaagttgtgcttattgaggcaaaatctcccaaattgatcaatggactagaatttcatattttctcatctg |
29038997 |
T |
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| Q |
108 |
acactaacaagtggaagaaggaaaaccattccatcaatttaactttgccttctctgccagaatttgagtttaaagaactttctacatctccactttactc |
207 |
Q |
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| T |
29038996 |
acactaacaagtggaagaaggaaaaccattccatcaatttaactttgccttctctgccagaattcgagtttaaagaactttctacatctccactttactc |
29038897 |
T |
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| Q |
208 |
aaatggtgcaatccattgggaaatatgtggatacttattggtgtatcatgtccaagaaaactattgtgagctaattgagatgcctaannnnnnncaagac |
307 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
29038896 |
aaatggtgcaatccattgggaaatatgtggatacttattggtgtatcatgtccaagaaaactattgtgagctaattgagatgcctaatttttttcaagac |
29038797 |
T |
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| Q |
308 |
tggtcatggcaattgacgatgatgtatcgtcgatgtttgtgcgaatcaggaaaccgtgcttactattgttacactgatattgatggtttccgcatttggg |
407 |
Q |
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||||||||||||| || |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||| |
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| T |
29038796 |
tggtcatggcaatcaacaatgatgtatcgtcgatgtttgtgcgaatcaggaaacagtgtttactattgttacactgatattgatggtttccacatttggg |
29038697 |
T |
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| Q |
408 |
aacttctgaaggagaatta |
426 |
Q |
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| T |
29038696 |
aacttctgaaggagaatta |
29038678 |
T |
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