View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0821_low_104 (Length: 218)
Name: NF0821_low_104
Description: NF0821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0821_low_104 |
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Alignment Details
Target: chr1 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 38304337 - 38304444
Alignment:
| Q |
1 |
tccatggtttcttccacccatcttcaccacacactcctctttcctcacaccttgtcaatgcttacgttaactttggttcccaccattacgcttttctctc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38304337 |
tccatggtttcttccacccatcttcaccacacactcctctttgctcacaccttgtcaatgcttacgttaactttggttcccaccattacgcttttctctt |
38304436 |
T |
|
| Q |
101 |
cttctctc |
108 |
Q |
| |
|
|||||||| |
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|
| T |
38304437 |
cttctctc |
38304444 |
T |
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