View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0821_low_20 (Length: 526)
Name: NF0821_low_20
Description: NF0821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0821_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 29 - 333
Target Start/End: Original strand, 44119977 - 44120290
Alignment:
| Q |
29 |
atcataaaacaacgtatcaattgtatcaactcacccaactacgtattttcatggaatataccttttttaagtccggcgtgcaacaatatcatgtgcagat |
128 |
Q |
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| T |
44119977 |
atcataaaacaacgtatcaattgtatcaactcacccaactacgtatttttatggaatataccttttttaagtctggcgtgcaacaatatcatgtgcagat |
44120076 |
T |
|
| Q |
129 |
aaatcattaatatttaatttactgtttaggccctcagcgtggtaagttgttgg--------atgaaattttcgaaaaaactattacctatccgaacattg |
220 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||| ||||||||||||||||||| |
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| T |
44120077 |
aaatcattaatatttaatttactgtttaggccctcagcgtgttaagttgttggatccacctataaaattttcgaaaaaaccattacctatccgaacattg |
44120176 |
T |
|
| Q |
221 |
tattagaccccatgaccactcatt-aactacacacataatcctgaccaatcttcgtgagaaccatcaccgcaacaatgccttaattttatctacgacttc |
319 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
44120177 |
tattagaccccatgaccactcattaaactacacacataatcctgaccaatcttcgtgagaaccatcaccgcaacaatgccttaattttatctatgacttc |
44120276 |
T |
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| Q |
320 |
tctagcatgcgtag |
333 |
Q |
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|||||||||||||| |
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| T |
44120277 |
tctagcatgcgtag |
44120290 |
T |
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