View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0821_low_38 (Length: 371)
Name: NF0821_low_38
Description: NF0821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0821_low_38 |
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Alignment Details
Target: chr7 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 29 - 361
Target Start/End: Complemental strand, 47584022 - 47583689
Alignment:
| Q |
29 |
ataactggccattttgattcaaagagagaccatctacataaatagagagatcaagataatgatcatgtaaattttaatttcttaaggataaccaattaat |
128 |
Q |
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| T |
47584022 |
ataactggccattttgattcaaagagagaccatgtacataaatagagagatcaagataatgatcatgtaaattttcatttcttaaggataaccaattaat |
47583923 |
T |
|
| Q |
129 |
ccataagtatagttttattcggagcatatgtttgaatacttctctttcaaaacagaaagactctagtatcaaactctattacaaacacaggatttttct- |
227 |
Q |
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| T |
47583922 |
ccataagtatagttttattcggagcatatgtttgaatacttctctttcaaaacagaaagactctagtatcaaactctattacaaacacaggatttttcta |
47583823 |
T |
|
| Q |
228 |
acaatatttgagcattttattgtttagcataaatgatggagaacaaagggttggttatgtctagctcattcccacaatccacaaactgatagcttacaat |
327 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47583822 |
acaatatttgagcattttattgtttagcatcaatgatggagaacaaagggttggttatgtctagctcattcccacaatccacaaactgatagcttacaat |
47583723 |
T |
|
| Q |
328 |
aagatgtccctgttggtatcctctgccatctgtg |
361 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
47583722 |
aagatgtccctgttggtatcctctgccatctgtg |
47583689 |
T |
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