View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0821_low_41 (Length: 367)
Name: NF0821_low_41
Description: NF0821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0821_low_41 |
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Alignment Details
Target: chr8 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 10 - 320
Target Start/End: Complemental strand, 40001251 - 40000942
Alignment:
| Q |
10 |
attatactc-atgtgtttattagatggattttcaataaaaactcatttgaataatgatttgatcatgggtttttgacgttgtttctaagtctatatagct |
108 |
Q |
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| T |
40001251 |
attatactccatgtgtttattagatggattttcaataaaaactcatttgaataatgatttgaccatgggtttttgacgttgtttctaaatctata--gct |
40001154 |
T |
|
| Q |
109 |
ttgtatcattagtgattttttgatgaatgatggaatagaccgtactgtgtgcaaactaaattggccataattttccattttctcttttaactcagatatt |
208 |
Q |
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| T |
40001153 |
tcgtatcattagtgattttttgatgaatgatggaatagaccgtattgtgtgcaaactaaattagccataattttccattttctcttttaactcatatatt |
40001054 |
T |
|
| Q |
209 |
acaagagaatatgttgatttgaatatgtatctctgatgggaaattaatttgttatgtttgattcacaaactactccgaatctccaatttgattcccagaa |
308 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40001053 |
acaaaagaatatgttgatttgaatatgtatctctgatgggaaattaatttgttatgtttgattcacaaactactccgaatctccaatttgattcccagaa |
40000954 |
T |
|
| Q |
309 |
atatgaataggc |
320 |
Q |
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|||||||||||| |
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| T |
40000953 |
atatgaataggc |
40000942 |
T |
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