View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0824_low_12 (Length: 322)
Name: NF0824_low_12
Description: NF0824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0824_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 129; Significance: 9e-67; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 102 - 237
Target Start/End: Original strand, 36718077 - 36718213
Alignment:
| Q |
102 |
agtaccttcctctgcattttgtaatttagcctaatattt-gatcattatctgtaatctttaagattacatgttagattaaaaagacaaaggtacaaaaag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36718077 |
agtaccttcctctgcattttgtaatttagcctaatattttgatcattatctgtaatctttaagattacatgttagattaaaaagacaaaggtacaaaaag |
36718176 |
T |
|
| Q |
201 |
cttacgcaaacaacaaggtaaaatgcatgtatatgat |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
36718177 |
cttacgcaaacaacaaggtaaaatgcatgtatatgat |
36718213 |
T |
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