View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0824_low_5 (Length: 533)
Name: NF0824_low_5
Description: NF0824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0824_low_5 |
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Alignment Details
Target: chr4 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 3420231 - 3420301
Alignment:
| Q |
13 |
aatatctgaatatcatgaatatgcttttaaatttaatctttctttgcaacaaatgaaagactattaggaac |
83 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |
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| T |
3420231 |
aatatctgaatatcatgaatatgcttttaaatttgatctttctttgaaacaaatgaaagactattaggaac |
3420301 |
T |
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